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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0698
MET 10.0263
SER 20.0298
THR 30.0314
ILE 40.0306
THR 50.0391
LYS 60.0413
ASP 70.0448
GLN 80.0369
ILE 90.0317
LEU 100.0383
GLU 110.0372
GLY 120.0283
VAL 130.0291
ALA 140.0354
ALA 150.0306
LEU 160.0262
SER 170.0269
VAL 180.0279
MET 190.0238
GLU 200.0226
ILE 210.0260
VAL 220.0275
GLU 230.0270
LEU 240.0276
ILE 250.0316
SER 260.0316
ALA 270.0387
MET 280.0407
GLU 290.0410
GLU 300.0457
LYS 310.0538
PHE 320.0551
GLY 330.0517
VAL 340.0487
SER 350.0391
ALA 360.0411
ALA 370.0374
ALA 380.0446
VAL 390.0546
ALA 400.0543
ALA 410.0574
GLY 420.0693
PRO 430.0698
ALA 440.0657
ALA 450.0523
ALA 460.0466
VAL 470.0400
GLU 480.0323
ALA 490.0240
ALA 500.0169
GLU 510.0070
GLU 520.0049
GLN 530.0023
THR 540.0010
GLU 550.0032
PHE 560.0026
ASP 570.0030
VAL 580.0038
VAL 590.0035
LEU 600.0043
ALA 610.0035
SER 620.0045
PHE 630.0058
GLY 640.0067
GLU 650.0078
ASN 660.0085
LYS 670.0078
VAL 680.0091
ALA 690.0092
VAL 700.0079
ILE 710.0082
LYS 720.0094
ALA 730.0086
VAL 740.0076
ARG 750.0088
GLY 760.0093
ALA 770.0080
THR 780.0078
GLY 790.0092
LEU 800.0090
GLY 810.0099
LEU 820.0098
LYS 830.0092
GLU 840.0082
ALA 850.0078
LYS 860.0076
ASP 870.0066
LEU 880.0059
VAL 890.0059
GLU 900.0053
SER 910.0042
ALA 920.0037
PRO 930.0030
ALA 940.0037
VAL 950.0040
LEU 960.0053
LYS 970.0051
GLU 980.0043
GLY 990.0040
VAL 1000.0044
ASN 1010.0039
LYS 1020.0038
ASP 1030.0052
GLU 1040.0057
ALA 1050.0048
GLU 1060.0055
THR 1070.0067
LEU 1080.0063
LYS 1090.0059
LYS 1100.0072
SER 1110.0079
LEU 1120.0071
GLU 1130.0072
GLU 1140.0086
ALA 1150.0084
GLY 1160.0078
ALA 1170.0064
SER 1180.0053
VAL 1190.0047
GLU 1200.0035
ILE 1210.0033
LYS 1220.0023
GLU 1230.0017
ALA 1240.0024
ALA 1250.0023
ALA 1260.0031
LYS 1270.0033
ALA 1280.0029
TYR 1290.0034
LYS 1300.0031
ILE 1310.0042
ILE 1320.0040
SER 1330.0054
LEU 1340.0054
LYS 1350.0067
TYR 1360.0065
THR 1370.0077
ARG 1380.0074
LYS 1390.0085
VAL 1400.0085
CYS 1410.0094
ILE 1420.0099
GLY 1430.0103
PRO 1440.0117
GLY 1450.0121
PRO 1460.0137
GLY 1470.0156
LYS 1480.0160
ALA 1490.0166
TYR 1500.0152
LYS 1510.0154
ILE 1520.0144
ILE 1530.0138
SER 1540.0130
LEU 1550.0123
LYS 1560.0116
TYR 1570.0106
THR 1580.0099
ARG 1590.0091
LYS 1600.0086
VAL 1610.0080
CYS 1620.0076
GLY 1630.0068
PRO 1640.0075
GLY 1650.0076
PRO 1660.0075
GLY 1670.0091
GLY 1680.0090
LYS 1690.0100
ALA 1700.0096
TYR 1710.0100
LYS 1720.0102
ILE 1730.0108
ILE 1740.0114
SER 1750.0122
LEU 1760.0132
LYS 1770.0141
TYR 1780.0148
THR 1790.0156
ARG 1800.0165
LYS 1810.0171
VAL 1820.0178
GLY 1830.0180
PRO 1840.0175
GLY 1850.0157
PRO 1860.0136
GLY 1870.0131
ILE 1880.0118
ILE 1890.0112
SER 1900.0106
LEU 1910.0097
LYS 1920.0092
TYR 1930.0082
THR 1940.0077
ARG 1950.0067
LYS 1960.0059
VAL 1970.0051
CYS 1980.0048
ILE 1990.0038
GLN 2000.0037
LEU 2010.0026
GLY 2020.0026
GLY 2030.0024
PRO 2040.0022
GLY 2050.0022
PRO 2060.0017
GLY 2070.0017
ASN 2080.0018
ILE 2090.0018
LYS 2100.0017
THR 2110.0015
ALA 2120.0018
PHE 2130.0017
HIS 2140.0014
CYS 2150.0015
TYR 2160.0020
ALA 2170.0016
ALA 2180.0010
TYR 2190.0015
MET 2200.0019
THR 2210.0015
SER 2220.0009
ILE 2230.0014
LYS 2240.0012
ALA 2250.0018
CYS 2260.0011
ASP 2270.0028
LEU 2280.0012
LYS 2290.0033
LYS 2300.0034
PRO 2310.0046
LEU 2320.0065
MET 2330.0060
GLU 2340.0086
SER 2350.0094
GLY 2360.0086
TRP 2370.0064
SER 2380.0061
ASP 2390.0053
THR 2400.0070
ALA 2410.0076
HIS 2420.0127
GLY 2430.0155
LYS 2440.0211
LYS 2450.0243
SER 2460.0253
LEU 2470.0217
PRO 2480.0235
SER 2490.0234
SER 2500.0190
SER 2510.0139
SER 2520.0117
TYR 2530.0109
SER 2540.0084
TYR 2550.0083
ARG 2560.0065
ARG 2570.0055
LYS 2580.0055
LEU 2590.0052
THR 2600.0066
ASN 2610.0077
PRO 2620.0093
ALA 2630.0106
ASN 2640.0100
LYS 2650.0090
GLU 2660.0074
GLU 2670.0063
SER 2680.0051
ILE 2690.0049
LYS 2700.0051
LYS 2710.0058
GLN 2720.0065
LYS 2730.0078
TYR 2740.0097
SER 2750.0113
TYR 2760.0119
PRO 2770.0073
TRP 2780.0088
GLN 2790.0049
THR 2800.0062
SER 2810.0107
LYS 2820.0203
CYS 2830.0257
PHE 2840.0430
ASP 2880.0364
TYR 2890.0190
GLN 2900.0396
TYR 2910.0568
CYS 2970.0614
ASN 2980.0594
PRO 2990.0518
GLY 3000.0539
LYS 3010.0465
LYS 3020.0410
ASN 3030.0335
THR 3040.0329
ILE 3050.0243
SER 3060.0195
GLY 3070.0142
TYR 3080.0098
LYS 3090.0133
ARG 3100.0127
MET 3110.0066
MET 3120.0057
ALA 3130.0073
THR 3140.0059
LYS 3150.0022
ASP 3160.0031
SER 3170.0048
PHE 3180.0037
GLN 3190.0037
SER 3200.0031
PHE 3210.0035
ASN 3220.0033
LEU 3230.0039
THR 3240.0051
GLU 3250.0058
PRO 3260.0051
HIS 3270.0067
ILE 3280.0065
THR 3290.0081
THR 3300.0086
ASN 3310.0078
LYS 3320.0066
LEU 3330.0054
GLU 3340.0061
TRP 3350.0056
ILE 3360.0063
ASP 3370.0057
PRO 3380.0061
ASP 3390.0063
GLY 3400.0074
ASN 3410.0068
THR 3420.0067
ARG 3430.0089
GLY 3440.0093
GLY 3450.0106
GLY 3460.0119
GLY 10.0008
SER 20.0009
HIS 30.0011
SER 40.0012
MET 50.0014
ARG 60.0015
TYR 70.0016
PHE 80.0017
PHE 90.0018
THR 100.0019
SER 110.0018
VAL 120.0019
SER 130.0019
ARG 140.0019
PRO 150.0019
GLY 160.0017
ARG 170.0016
GLY 180.0014
GLU 190.0015
PRO 200.0018
ARG 210.0019
PHE 220.0019
ILE 230.0018
ALA 240.0018
VAL 250.0017
GLY 260.0017
TYR 270.0015
VAL 280.0014
ASP 290.0013
ASP 300.0013
THR 310.0015
GLN 320.0016
PHE 330.0017
VAL 340.0018
ARG 350.0018
PHE 360.0019
ASP 370.0019
SER 380.0020
ASP 390.0020
ALA 400.0020
ALA 410.0022
SER 420.0021
GLN 430.0021
ARG 440.0020
MET 450.0019
GLU 460.0019
PRO 470.0018
ARG 480.0018
ALA 490.0017
PRO 500.0017
TRP 510.0017
ILE 520.0017
GLU 530.0019
GLN 540.0018
GLU 550.0019
GLY 560.0019
PRO 570.0020
GLU 580.0020
TYR 590.0019
TRP 600.0020
ASP 610.0020
GLY 620.0020
GLU 630.0019
THR 640.0020
ARG 650.0020
LYS 660.0019
VAL 670.0019
LYS 680.0020
ALA 690.0019
HIS 700.0019
SER 710.0017
GLN 720.0016
THR 730.0017
HIS 740.0019
ARG 750.0017
VAL 760.0019
ASP 770.0019
LEU 780.0020
GLY 790.0020
THR 800.0021
LEU 810.0020
ARG 820.0021
GLY 830.0022
TYR 840.0021
TYR 850.0022
ASN 860.0025
GLN 870.0023
SER 880.0023
GLU 890.0020
ALA 900.0021
GLY 910.0022
SER 920.0021
HIS 930.0020
THR 940.0019
VAL 950.0018
GLN 960.0018
ARG 970.0018
MET 980.0016
TYR 990.0016
GLY 1000.0015
CYS 1010.0013
ASP 1020.0012
VAL 1030.0011
GLY 1040.0009
SER 1050.0008
ASP 1060.0009
TRP 1070.0010
ARG 1080.0011
PHE 1090.0012
LEU 1100.0011
ARG 1110.0012
GLY 1120.0014
TYR 1130.0014
HIS 1140.0016
GLN 1150.0016
TYR 1160.0017
ALA 1170.0018
TYR 1180.0019
ASP 1190.0019
GLY 1200.0018
LYS 1210.0017
ASP 1220.0017
TYR 1230.0018
ILE 1240.0017
ALA 1250.0017
LEU 1260.0016
LYS 1270.0015
GLU 1280.0014
ASP 1290.0015
LEU 1300.0016
ARG 1310.0017
SER 1320.0017
TRP 1330.0017
THR 1340.0016
ALA 1350.0018
ALA 1360.0017
ASP 1370.0018
MET 1380.0019
ALA 1390.0020
ALA 1400.0019
GLN 1410.0019
THR 1420.0020
THR 1430.0020
LYS 1440.0019
HIS 1450.0020
LYS 1460.0021
TRP 1470.0020
GLU 1480.0020
ALA 1490.0022
ALA 1500.0022
HIS 1510.0022
VAL 1520.0021
ALA 1530.0019
GLU 1540.0020
GLN 1550.0020
LEU 1560.0019
ARG 1570.0017
ALA 1580.0018
TYR 1590.0018
LEU 1600.0016
GLU 1610.0015
GLY 1620.0016
THR 1630.0017
CYS 1640.0016
VAL 1650.0014
GLU 1660.0015
TRP 1670.0015
LEU 1680.0014
ARG 1690.0013
ARG 1700.0015
TYR 1710.0015
LEU 1720.0013
GLU 1730.0014
ASN 1740.0015
GLY 1750.0015
LYS 1760.0014
GLU 1770.0014
THR 1780.0014
LEU 1790.0013
GLN 1800.0012
ARG 1810.0012
THR 1820.0011
ASP 1830.0012
ALA 1840.0011
PRO 1850.0011
LYS 1860.0013
THR 1870.0013
HIS 1880.0014
MET 1890.0015
THR 1900.0017
HIS 1910.0018
HIS 1920.0020
ALA 1930.0021
VAL 1940.0022
SER 1950.0024
ASP 1960.0025
HIS 1970.0024
GLU 1980.0021
ALA 1990.0020
THR 2000.0018
LEU 2010.0016
ARG 2020.0015
CYS 2030.0013
TRP 2040.0014
ALA 2050.0013
LEU 2060.0014
SER 2070.0015
PHE 2080.0013
TYR 2090.0012
PRO 2100.0011
ALA 2110.0012
GLU 2120.0009
ILE 2130.0009
THR 2140.0007
LEU 2150.0009
THR 2160.0008
TRP 2170.0010
GLN 2180.0010
ARG 2190.0013
ASP 2200.0013
GLY 2210.0010
GLU 2220.0010
ASP 2230.0009
GLN 2240.0010
THR 2250.0009
GLN 2260.0011
ASP 2270.0013
THR 2280.0012
GLU 2290.0013
LEU 2300.0012
VAL 2310.0013
GLU 2320.0014
THR 2330.0014
ARG 2340.0016
PRO 2350.0017
ALA 2360.0018
GLY 2370.0019
ASP 2380.0019
GLY 2390.0016
THR 2400.0015
PHE 2410.0014
GLN 2420.0014
LYS 2430.0013
TRP 2440.0013
ALA 2450.0012
ALA 2460.0014
VAL 2470.0015
VAL 2480.0017
VAL 2490.0017
PRO 2500.0020
SER 2510.0021
GLY 2520.0021
GLN 2530.0018
GLU 2540.0017
GLN 2550.0016
ARG 2560.0015
TYR 2570.0013
THR 2580.0011
CYS 2590.0010
HIS 2600.0008
VAL 2610.0008
GLN 2620.0007
HIS 2630.0007
GLU 2640.0007
GLY 2650.0008
LEU 2660.0007
PRO 2670.0005
LYS 2680.0005
PRO 2690.0006
LEU 2700.0008
THR 2710.0008
LEU 2720.0010
ARG 2730.0012
TRP 2740.0014
GLU 2750.0015
PRO 2760.0013
GLN 2780.0019
ARG 2790.0019
THR 2800.0019
PRO 2810.0019
LYS 2820.0019
ILE 2830.0017
GLN 2840.0017
VAL 2850.0018
TYR 2860.0019
SER 2870.0020
ARG 2880.0020
HIS 2890.0021
PRO 2900.0022
ALA 2910.0024
GLU 2920.0026
ASN 2930.0028
GLY 2940.0030
LYS 2950.0029
SER 2960.0028
ASN 2970.0025
PHE 2980.0023
LEU 2990.0022
ASN 3000.0020
CYS 3010.0019
TYR 3020.0018
VAL 3030.0018
SER 3040.0017
GLY 3050.0017
PHE 3060.0018
HIS 3070.0018
PRO 3080.0020
SER 3090.0018
ASP 3100.0020
ILE 3110.0020
GLU 3120.0020
VAL 3130.0021
ASP 3140.0023
LEU 3150.0022
LEU 3160.0023
LYS 3170.0024
ASN 3180.0024
GLY 3190.0023
GLU 3200.0026
ARG 3210.0026
ILE 3220.0027
GLU 3230.0029
LYS 3240.0028
VAL 3250.0025
GLU 3260.0024
HIS 3270.0021
SER 3280.0018
ASP 3290.0019
LEU 3300.0018
SER 3310.0017
PHE 3320.0016
SER 3330.0016
LYS 3340.0015
ASP 3350.0015
TRP 3360.0017
SER 3370.0017
PHE 3380.0017
TYR 3390.0017
LEU 3400.0018
LEU 3410.0018
TYR 3420.0020
TYR 3430.0022
THR 3440.0024
GLU 3450.0026
PHE 3460.0026
THR 3470.0027
PRO 3480.0026
THR 3490.0028
GLU 3500.0026
LYS 3510.0026
ASP 3520.0025
GLU 3530.0022
TYR 3540.0022
ALA 3550.0020
CYS 3560.0019
ARG 3570.0020
VAL 3580.0019
ASN 3590.0020
HIS 3600.0020
VAL 3610.0021
THR 3620.0022
LEU 3630.0026
SER 3640.0033
GLN 3650.0029
PRO 3660.0023
LYS 3670.0021
ILE 3680.0018
VAL 3690.0016
LYS 3700.0018
TRP 3710.0018
ASP 3720.0018
ARG 3730.0020
ASP 3740.0020
MET 3750.0018
SER 10.0013
GLN 20.0012
PHE 30.0011
ARG 40.0012
VAL 50.0012
SER 60.0016
PRO 70.0019
LEU 80.0018
ASP 90.0024
ARG 100.0023
THR 110.0024
TRP 120.0027
ASN 130.0032
LEU 140.0035
GLY 150.0038
GLU 160.0033
THR 170.0029
VAL 180.0023
GLU 190.0020
LEU 200.0015
LYS 210.0012
CYS 220.0010
GLN 230.0011
VAL 240.0009
LEU 250.0013
LEU 260.0011
SER 270.0013
ASN 280.0011
PRO 290.0008
THR 300.0007
SER 310.0005
GLY 320.0001
CYS 330.0002
SER 340.0004
TRP 350.0006
LEU 360.0007
PHE 370.0008
GLN 380.0007
PRO 390.0008
ARG 400.0005
GLY 410.0010
ALA 420.0012
ALA 430.0015
ALA 440.0012
SER 450.0013
PRO 460.0010
THR 470.0012
PHE 480.0012
LEU 490.0013
LEU 500.0012
TYR 510.0008
LEU 520.0007
SER 530.0005
GLN 540.0005
ASN 550.0008
LYS 560.0013
PRO 570.0013
LYS 580.0015
ALA 590.0017
ALA 600.0018
GLU 610.0024
GLY 620.0026
LEU 630.0023
ASP 640.0026
THR 650.0025
GLN 660.0029
ARG 670.0027
PHE 680.0021
SER 690.0018
GLY 700.0014
LYS 710.0012
ARG 720.0009
LEU 730.0012
GLY 740.0011
ASP 750.0010
THR 760.0011
PHE 770.0009
VAL 780.0013
LEU 790.0014
THR 800.0018
LEU 810.0022
SER 820.0029
ASP 830.0033
PHE 840.0028
ARG 850.0029
ARG 860.0026
GLU 870.0024
ASN 880.0019
GLU 890.0016
GLY 900.0008
TYR 910.0005
TYR 920.0006
PHE 930.0003
CYS 940.0002
SER 950.0003
ALA 960.0004
LEU 970.0007
SER 980.0010
ASN 990.0013
SER 1000.0013
ILE 1010.0013
MET 1020.0010
TYR 1030.0008
PHE 1040.0006
SER 1050.0006
HIS 1060.0009
PHE 1070.0006
VAL 1080.0009
PRO 1090.0010
VAL 1100.0013
PHE 1110.0017
LEU 1120.0023
PRO 1130.0026
ALA 1140.0021
SER 10.0024
GLN 20.0025
PHE 30.0026
ARG 40.0029
VAL 50.0028
SER 60.0032
PRO 70.0033
LEU 80.0031
ASP 90.0034
ARG 100.0034
THR 110.0033
TRP 120.0034
ASN 130.0036
LEU 140.0037
GLY 150.0040
GLU 160.0039
THR 170.0037
VAL 180.0034
GLU 190.0034
LEU 200.0030
LYS 210.0030
CYS 220.0028
GLN 230.0029
VAL 240.0026
LEU 250.0028
LEU 260.0026
SER 270.0027
ASN 280.0024
PRO 290.0024
THR 300.0023
SER 310.0018
GLY 320.0020
CYS 330.0020
SER 340.0018
TRP 350.0019
LEU 360.0016
PHE 370.0017
GLN 380.0014
PRO 390.0016
ARG 400.0015
GLY 410.0010
ALA 420.0005
ALA 430.0005
ALA 440.0008
SER 450.0008
PRO 460.0010
THR 470.0013
PHE 480.0015
LEU 490.0019
LEU 500.0020
TYR 510.0019
LEU 520.0022
SER 530.0022
GLN 540.0024
ASN 550.0024
LYS 560.0026
PRO 570.0024
LYS 580.0021
ALA 590.0022
ALA 600.0019
GLU 610.0020
GLY 620.0024
LEU 630.0024
ASP 640.0030
THR 650.0031
GLN 660.0035
ARG 670.0034
PHE 680.0030
SER 690.0030
GLY 700.0029
LYS 710.0031
ARG 720.0030
LEU 730.0034
GLY 740.0033
ASP 750.0030
THR 760.0031
PHE 770.0028
VAL 780.0030
LEU 790.0029
THR 800.0032
LEU 810.0032
SER 820.0036
ASP 830.0037
PHE 840.0034
ARG 850.0032
ARG 860.0029
GLU 870.0026
ASN 880.0026
GLU 890.0024
GLY 900.0021
TYR 910.0019
TYR 920.0021
PHE 930.0019
CYS 940.0019
SER 950.0016
ALA 960.0017
LEU 970.0015
SER 980.0017
ASN 990.0016
SER 1000.0012
ILE 1010.0014
MET 1020.0013
TYR 1030.0016
PHE 1040.0016
SER 1050.0020
HIS 1060.0021
PHE 1070.0020
VAL 1080.0024
PRO 1090.0024
VAL 1100.0026
PHE 1110.0027
LEU 1120.0031
PRO 1130.0033
ALA 1140.0030

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.