CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1276
MET 10.0137
SER 20.0148
THR 30.0145
ILE 40.0155
THR 50.0188
LYS 60.0205
ASP 70.0230
GLN 80.0200
ILE 90.0180
LEU 100.0216
GLU 110.0221
GLY 120.0183
VAL 130.0187
ALA 140.0224
ALA 150.0208
LEU 160.0184
SER 170.0191
VAL 180.0196
MET 190.0170
GLU 200.0156
ILE 210.0172
VAL 220.0172
GLU 230.0157
LEU 240.0157
ILE 250.0172
SER 260.0166
ALA 270.0189
MET 280.0193
GLU 290.0192
GLU 300.0207
LYS 310.0240
PHE 320.0244
GLY 330.0229
VAL 340.0219
SER 350.0185
ALA 360.0189
ALA 370.0182
ALA 380.0208
VAL 390.0240
ALA 400.0240
ALA 410.0258
GLY 420.0307
PRO 430.0315
ALA 440.0304
ALA 450.0249
ALA 460.0225
VAL 470.0207
GLU 480.0169
ALA 490.0127
ALA 500.0103
GLU 510.0067
GLU 520.0060
GLN 530.0051
THR 540.0068
GLU 550.0057
PHE 560.0059
ASP 570.0057
VAL 580.0068
VAL 590.0059
LEU 600.0069
ALA 610.0062
SER 620.0076
PHE 630.0093
GLY 640.0110
GLU 650.0124
ASN 660.0132
LYS 670.0117
VAL 680.0135
ALA 690.0142
VAL 700.0121
ILE 710.0121
LYS 720.0142
ALA 730.0134
VAL 740.0117
ARG 750.0133
GLY 760.0145
ALA 770.0128
THR 780.0120
GLY 790.0140
LEU 800.0130
GLY 810.0139
LEU 820.0136
LYS 830.0121
GLU 840.0109
ALA 850.0109
LYS 860.0103
ASP 870.0085
LEU 880.0079
VAL 890.0084
GLU 900.0073
SER 910.0055
ALA 920.0055
PRO 930.0046
ALA 940.0052
VAL 950.0057
LEU 960.0078
LYS 970.0081
GLU 980.0070
GLY 990.0072
VAL 1000.0084
ASN 1010.0088
LYS 1020.0085
ASP 1030.0106
GLU 1040.0108
ALA 1050.0092
GLU 1060.0103
THR 1070.0121
LEU 1080.0112
LYS 1090.0105
LYS 1100.0125
SER 1110.0133
LEU 1120.0118
GLU 1130.0122
GLU 1140.0143
ALA 1150.0137
GLY 1160.0128
ALA 1170.0106
SER 1180.0093
VAL 1190.0082
GLU 1200.0066
ILE 1210.0062
LYS 1220.0045
GLU 1230.0040
ALA 1240.0040
ALA 1250.0026
ALA 1260.0020
LYS 1270.0022
ALA 1280.0017
TYR 1290.0019
LYS 1300.0017
ILE 1310.0022
ILE 1320.0021
SER 1330.0026
LEU 1340.0026
LYS 1350.0031
TYR 1360.0027
THR 1370.0031
ARG 1380.0028
LYS 1390.0030
VAL 1400.0031
CYS 1410.0028
ILE 1420.0037
GLY 1430.0032
PRO 1440.0043
GLY 1450.0042
PRO 1460.0049
GLY 1470.0069
LYS 1480.0078
ALA 1490.0085
TYR 1500.0076
LYS 1510.0084
ILE 1520.0076
ILE 1530.0078
SER 1540.0073
LEU 1550.0072
LYS 1560.0068
TYR 1570.0064
THR 1580.0060
ARG 1590.0057
LYS 1600.0055
VAL 1610.0049
CYS 1620.0049
GLY 1630.0041
PRO 1640.0050
GLY 1650.0056
PRO 1660.0062
GLY 1670.0073
GLY 1680.0066
LYS 1690.0076
ALA 1700.0066
TYR 1710.0075
LYS 1720.0074
ILE 1730.0077
ILE 1740.0079
SER 1750.0084
LEU 1760.0088
LYS 1770.0091
TYR 1780.0095
THR 1790.0097
ARG 1800.0101
LYS 1810.0100
VAL 1820.0102
GLY 1830.0098
PRO 1840.0089
GLY 1850.0072
PRO 1860.0054
GLY 1870.0057
ILE 1880.0048
ILE 1890.0051
SER 1900.0048
LEU 1910.0049
LYS 1920.0046
TYR 1930.0043
THR 1940.0040
ARG 1950.0037
LYS 1960.0033
VAL 1970.0030
CYS 1980.0026
ILE 1990.0024
GLN 2000.0024
LEU 2010.0019
GLY 2020.0020
GLY 2030.0018
PRO 2040.0013
GLY 2050.0012
PRO 2060.0004
GLY 2070.0006
ASN 2080.0007
ILE 2090.0006
LYS 2100.0008
THR 2110.0007
ALA 2120.0009
PHE 2130.0008
HIS 2140.0007
CYS 2150.0009
TYR 2160.0015
ALA 2170.0009
ALA 2180.0013
TYR 2190.0018
MET 2200.0014
THR 2210.0015
SER 2220.0021
ILE 2230.0023
LYS 2240.0027
ALA 2250.0029
CYS 2260.0044
ASP 2270.0033
LEU 2280.0038
LYS 2290.0047
LYS 2300.0059
PRO 2310.0073
LEU 2320.0077
MET 2330.0079
GLU 2340.0083
SER 2350.0087
GLY 2360.0072
TRP 2370.0074
SER 2380.0072
ASP 2390.0077
THR 2400.0071
ALA 2410.0094
HIS 2420.0127
GLY 2430.0160
LYS 2440.0256
LYS 2450.0287
SER 2460.0291
LEU 2470.0225
PRO 2480.0235
SER 2490.0224
SER 2500.0148
SER 2510.0081
SER 2520.0068
TYR 2530.0070
SER 2540.0043
TYR 2550.0054
ARG 2560.0034
ARG 2570.0050
LYS 2580.0031
LEU 2590.0051
THR 2600.0038
ASN 2610.0052
PRO 2620.0047
ALA 2630.0045
ASN 2640.0030
LYS 2650.0053
GLU 2660.0049
GLU 2670.0072
SER 2680.0070
ILE 2690.0085
LYS 2700.0096
LYS 2710.0079
GLN 2720.0103
LYS 2730.0079
TYR 2740.0108
SER 2750.0097
TYR 2760.0114
PRO 2770.0082
TRP 2780.0089
GLN 2790.0087
THR 2800.0072
SER 2810.0060
LYS 2820.0147
CYS 2830.0173
PHE 2840.0308
ASP 2880.0273
TYR 2890.0097
GLN 2900.0262
TYR 2910.0373
CYS 2970.1276
ASN 2980.1225
PRO 2990.1070
GLY 3000.1105
LYS 3010.0949
LYS 3020.0842
ASN 3030.0692
THR 3040.0678
ILE 3050.0501
SER 3060.0414
GLY 3070.0306
TYR 3080.0217
LYS 3090.0277
ARG 3100.0264
MET 3110.0147
MET 3120.0125
ALA 3130.0149
THR 3140.0121
LYS 3150.0055
ASP 3160.0068
SER 3170.0104
PHE 3180.0087
GLN 3190.0080
SER 3200.0051
PHE 3210.0046
ASN 3220.0034
LEU 3230.0028
THR 3240.0031
GLU 3250.0029
PRO 3260.0021
HIS 3270.0021
ILE 3280.0020
THR 3290.0026
THR 3300.0034
ASN 3310.0026
LYS 3320.0016
LEU 3330.0016
GLU 3340.0023
TRP 3350.0029
ILE 3360.0041
ASP 3370.0049
PRO 3380.0053
ASP 3390.0066
GLY 3400.0077
ASN 3410.0083
THR 3420.0079
ARG 3430.0105
GLY 3440.0111
GLY 3450.0136
GLY 3460.0147
GLY 10.0011
SER 20.0010
HIS 30.0010
SER 40.0009
MET 50.0010
ARG 60.0008
TYR 70.0009
PHE 80.0007
PHE 90.0008
THR 100.0008
SER 110.0010
VAL 120.0011
SER 130.0013
ARG 140.0017
PRO 150.0017
GLY 160.0024
ARG 170.0026
GLY 180.0025
GLU 190.0020
PRO 200.0015
ARG 210.0015
PHE 220.0014
ILE 230.0013
ALA 240.0012
VAL 250.0012
GLY 260.0011
TYR 270.0009
VAL 280.0010
ASP 290.0006
ASP 300.0005
THR 310.0009
GLN 320.0011
PHE 330.0014
VAL 340.0016
ARG 350.0016
PHE 360.0017
ASP 370.0018
SER 380.0019
ASP 390.0022
ALA 400.0023
ALA 410.0027
SER 420.0026
GLN 430.0024
ARG 440.0023
MET 450.0021
GLU 460.0021
PRO 470.0020
ARG 480.0017
ALA 490.0017
PRO 500.0020
TRP 510.0019
ILE 520.0020
GLU 530.0023
GLN 540.0025
GLU 550.0025
GLY 560.0028
PRO 570.0029
GLU 580.0029
TYR 590.0025
TRP 600.0024
ASP 610.0026
GLY 620.0024
GLU 630.0021
THR 640.0022
ARG 650.0023
LYS 660.0019
VAL 670.0017
LYS 680.0019
ALA 690.0017
HIS 700.0014
SER 710.0014
GLN 720.0014
THR 730.0012
HIS 740.0010
ARG 750.0011
VAL 760.0009
ASP 770.0006
LEU 780.0005
GLY 790.0005
THR 800.0004
LEU 810.0002
ARG 820.0003
GLY 830.0002
TYR 840.0005
TYR 850.0007
ASN 860.0008
GLN 870.0008
SER 880.0010
GLU 890.0011
ALA 900.0015
GLY 910.0014
SER 920.0013
HIS 930.0009
THR 940.0007
VAL 950.0004
GLN 960.0004
ARG 970.0005
MET 980.0005
TYR 990.0007
GLY 1000.0009
CYS 1010.0010
ASP 1020.0010
VAL 1030.0013
GLY 1040.0014
SER 1050.0014
ASP 1060.0018
TRP 1070.0016
ARG 1080.0017
PHE 1090.0016
LEU 1100.0014
ARG 1110.0011
GLY 1120.0010
TYR 1130.0008
HIS 1140.0007
GLN 1150.0004
TYR 1160.0004
ALA 1170.0001
TYR 1180.0002
ASP 1190.0005
GLY 1200.0005
LYS 1210.0004
ASP 1220.0004
TYR 1230.0004
ILE 1240.0006
ALA 1250.0006
LEU 1260.0008
LYS 1270.0009
GLU 1280.0009
ASP 1290.0012
LEU 1300.0011
ARG 1310.0014
SER 1320.0012
TRP 1330.0010
THR 1340.0009
ALA 1350.0008
ALA 1360.0009
ASP 1370.0009
MET 1380.0010
ALA 1390.0008
ALA 1400.0008
GLN 1410.0009
THR 1420.0009
THR 1430.0008
LYS 1440.0010
HIS 1450.0011
LYS 1460.0011
TRP 1470.0011
GLU 1480.0013
ALA 1490.0014
ALA 1500.0013
HIS 1510.0014
VAL 1520.0012
ALA 1530.0012
GLU 1540.0015
GLN 1550.0014
LEU 1560.0012
ARG 1570.0014
ALA 1580.0016
TYR 1590.0015
LEU 1600.0013
GLU 1610.0016
GLY 1620.0018
THR 1630.0017
CYS 1640.0015
VAL 1650.0016
GLU 1660.0019
TRP 1670.0018
LEU 1680.0015
ARG 1690.0017
ARG 1700.0019
TYR 1710.0017
LEU 1720.0015
GLU 1730.0018
ASN 1740.0019
GLY 1750.0016
LYS 1760.0015
GLU 1770.0014
THR 1780.0012
LEU 1790.0011
GLN 1800.0011
ARG 1810.0007
THR 1820.0003
ASP 1830.0002
ALA 1840.0003
PRO 1850.0007
LYS 1860.0009
THR 1870.0012
HIS 1880.0016
MET 1890.0019
THR 1900.0022
HIS 1910.0025
HIS 1920.0027
ALA 1930.0030
VAL 1940.0029
SER 1950.0033
ASP 1960.0036
HIS 1970.0034
GLU 1980.0030
ALA 1990.0028
THR 2000.0025
LEU 2010.0023
ARG 2020.0020
CYS 2030.0017
TRP 2040.0014
ALA 2050.0011
LEU 2060.0009
SER 2070.0007
PHE 2080.0004
TYR 2090.0002
PRO 2100.0002
ALA 2110.0003
GLU 2120.0003
ILE 2130.0007
THR 2140.0010
LEU 2150.0013
THR 2160.0016
TRP 2170.0019
GLN 2180.0021
ARG 2190.0024
ASP 2200.0026
GLY 2210.0024
GLU 2220.0022
ASP 2230.0019
GLN 2240.0019
THR 2250.0016
GLN 2260.0016
ASP 2270.0019
THR 2280.0017
GLU 2290.0016
LEU 2300.0014
VAL 2310.0014
GLU 2320.0011
THR 2330.0008
ARG 2340.0010
PRO 2350.0009
ALA 2360.0012
GLY 2370.0014
ASP 2380.0013
GLY 2390.0010
THR 2400.0007
PHE 2410.0007
GLN 2420.0009
LYS 2430.0010
TRP 2440.0014
ALA 2450.0016
ALA 2460.0019
VAL 2470.0021
VAL 2480.0024
VAL 2490.0027
PRO 2500.0030
SER 2510.0033
GLY 2520.0034
GLN 2530.0031
GLU 2540.0028
GLN 2550.0029
ARG 2560.0028
TYR 2570.0024
THR 2580.0022
CYS 2590.0019
HIS 2600.0016
VAL 2610.0013
GLN 2620.0011
HIS 2630.0007
GLU 2640.0006
GLY 2650.0004
LEU 2660.0008
PRO 2670.0011
LYS 2680.0014
PRO 2690.0014
LEU 2700.0015
THR 2710.0019
LEU 2720.0019
ARG 2730.0023
TRP 2740.0024
GLU 2750.0027
PRO 2760.0027
GLN 2780.0018
ARG 2790.0015
THR 2800.0018
PRO 2810.0017
LYS 2820.0017
ILE 2830.0020
GLN 2840.0019
VAL 2850.0021
TYR 2860.0020
SER 2870.0019
ARG 2880.0016
HIS 2890.0016
PRO 2900.0017
ALA 2910.0021
GLU 2920.0023
ASN 2930.0028
GLY 2940.0029
LYS 2950.0026
SER 2960.0026
ASN 2970.0023
PHE 2980.0022
LEU 2990.0023
ASN 3000.0020
CYS 3010.0020
TYR 3020.0016
VAL 3030.0016
SER 3040.0012
GLY 3050.0011
PHE 3060.0013
HIS 3070.0011
PRO 3080.0012
SER 3090.0013
ASP 3100.0018
ILE 3110.0022
GLU 3120.0027
VAL 3130.0026
ASP 3140.0030
LEU 3150.0029
LEU 3160.0033
LYS 3170.0036
ASN 3180.0039
GLY 3190.0039
GLU 3200.0040
ARG 3210.0037
ILE 3220.0035
GLU 3230.0036
LYS 3240.0033
VAL 3250.0028
GLU 3260.0025
HIS 3270.0020
SER 3280.0016
ASP 3290.0015
LEU 3300.0012
SER 3310.0008
PHE 3320.0005
SER 3330.0005
LYS 3340.0004
ASP 3350.0006
TRP 3360.0004
SER 3370.0007
PHE 3380.0009
TYR 3390.0011
LEU 3400.0014
LEU 3410.0016
TYR 3420.0020
TYR 3430.0022
THR 3440.0026
GLU 3450.0027
PHE 3460.0028
THR 3470.0029
PRO 3480.0029
THR 3490.0032
GLU 3500.0033
LYS 3510.0037
ASP 3520.0036
GLU 3530.0035
TYR 3540.0031
ALA 3550.0030
CYS 3560.0028
ARG 3570.0031
VAL 3580.0027
ASN 3590.0029
HIS 3600.0024
VAL 3610.0024
THR 3620.0024
LEU 3630.0032
SER 3640.0041
GLN 3650.0042
PRO 3660.0037
LYS 3670.0032
ILE 3680.0032
VAL 3690.0029
LYS 3700.0030
TRP 3710.0027
ASP 3720.0026
ARG 3730.0023
ASP 3740.0023
MET 3750.0022
SER 10.0006
GLN 20.0008
PHE 30.0007
ARG 40.0006
VAL 50.0007
SER 60.0010
PRO 70.0010
LEU 80.0008
ASP 90.0009
ARG 100.0011
THR 110.0015
TRP 120.0018
ASN 130.0022
LEU 140.0026
GLY 150.0028
GLU 160.0022
THR 170.0021
VAL 180.0017
GLU 190.0017
LEU 200.0014
LYS 210.0011
CYS 220.0010
GLN 230.0010
VAL 240.0010
LEU 250.0010
LEU 260.0010
SER 270.0010
ASN 280.0012
PRO 290.0012
THR 300.0014
SER 310.0014
GLY 320.0014
CYS 330.0012
SER 340.0012
TRP 350.0011
LEU 360.0008
PHE 370.0009
GLN 380.0010
PRO 390.0013
ARG 400.0015
GLY 410.0017
ALA 420.0015
ALA 430.0011
ALA 440.0011
SER 450.0008
PRO 460.0008
THR 470.0010
PHE 480.0011
LEU 490.0013
LEU 500.0014
TYR 510.0015
LEU 520.0015
SER 530.0015
GLN 540.0017
ASN 550.0018
LYS 560.0020
PRO 570.0018
LYS 580.0017
ALA 590.0016
ALA 600.0015
GLU 610.0015
GLY 620.0017
LEU 630.0017
ASP 640.0020
THR 650.0021
GLN 660.0024
ARG 670.0022
PHE 680.0018
SER 690.0019
GLY 700.0018
LYS 710.0017
ARG 720.0016
LEU 730.0016
GLY 740.0016
ASP 750.0013
THR 760.0014
PHE 770.0014
VAL 780.0014
LEU 790.0014
THR 800.0017
LEU 810.0019
SER 820.0023
ASP 830.0024
PHE 840.0021
ARG 850.0022
ARG 860.0024
GLU 870.0020
ASN 880.0017
GLU 890.0016
GLY 900.0012
TYR 910.0010
TYR 920.0009
PHE 930.0007
CYS 940.0008
SER 950.0008
ALA 960.0011
LEU 970.0012
SER 980.0013
ASN 990.0015
SER 1000.0015
ILE 1010.0011
MET 1020.0010
TYR 1030.0008
PHE 1040.0006
SER 1050.0005
HIS 1060.0006
PHE 1070.0007
VAL 1080.0008
PRO 1090.0009
VAL 1100.0012
PHE 1110.0015
LEU 1120.0018
PRO 1130.0016
ALA 1140.0017
SER 10.0015
GLN 20.0016
PHE 30.0013
ARG 40.0012
VAL 50.0008
SER 60.0006
PRO 70.0004
LEU 80.0007
ASP 90.0009
ARG 100.0008
THR 110.0010
TRP 120.0011
ASN 130.0015
LEU 140.0018
GLY 150.0018
GLU 160.0014
THR 170.0012
VAL 180.0008
GLU 190.0007
LEU 200.0005
LYS 210.0007
CYS 220.0009
GLN 230.0013
VAL 240.0015
LEU 250.0018
LEU 260.0019
SER 270.0023
ASN 280.0023
PRO 290.0020
THR 300.0021
SER 310.0019
GLY 320.0016
CYS 330.0013
SER 340.0010
TRP 350.0007
LEU 360.0005
PHE 370.0005
GLN 380.0006
PRO 390.0010
ARG 400.0014
GLY 410.0014
ALA 420.0013
ALA 430.0010
ALA 440.0008
SER 450.0005
PRO 460.0004
THR 470.0004
PHE 480.0007
LEU 490.0008
LEU 500.0011
TYR 510.0013
LEU 520.0015
SER 530.0019
GLN 540.0022
ASN 550.0022
LYS 560.0021
PRO 570.0017
LYS 580.0016
ALA 590.0013
ALA 600.0011
GLU 610.0013
GLY 620.0014
LEU 630.0013
ASP 640.0017
THR 650.0018
GLN 660.0021
ARG 670.0017
PHE 680.0014
SER 690.0015
GLY 700.0014
LYS 710.0015
ARG 720.0017
LEU 730.0017
GLY 740.0019
ASP 750.0018
THR 760.0014
PHE 770.0012
VAL 780.0010
LEU 790.0009
THR 800.0010
LEU 810.0012
SER 820.0015
ASP 830.0017
PHE 840.0014
ARG 850.0017
ARG 860.0018
GLU 870.0017
ASN 880.0013
GLU 890.0012
GLY 900.0010
TYR 910.0006
TYR 920.0003
PHE 930.0004
CYS 940.0007
SER 950.0010
ALA 960.0013
LEU 970.0015
SER 980.0017
ASN 990.0018
SER 1000.0016
ILE 1010.0015
MET 1020.0012
TYR 1030.0012
PHE 1040.0009
SER 1050.0009
HIS 1060.0009
PHE 1070.0007
VAL 1080.0005
PRO 1090.0008
VAL 1100.0008
PHE 1110.0012
LEU 1120.0015
PRO 1130.0017
ALA 1140.0021

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.