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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0882
MET 10.0882
SER 20.0789
THR 30.0645
ILE 40.0536
THR 50.0438
LYS 60.0297
ASP 70.0356
GLN 80.0469
ILE 90.0385
LEU 100.0371
GLU 110.0505
GLY 120.0520
VAL 130.0485
ALA 140.0550
ALA 150.0644
LEU 160.0606
SER 170.0657
VAL 180.0633
MET 190.0645
GLU 200.0593
ILE 210.0536
VAL 220.0551
GLU 230.0558
LEU 240.0488
ILE 250.0458
SER 260.0500
ALA 270.0475
MET 280.0405
GLU 290.0429
GLU 300.0466
LYS 310.0406
PHE 320.0369
GLY 330.0416
VAL 340.0381
SER 350.0408
ALA 360.0395
ALA 370.0403
ALA 380.0383
VAL 390.0382
ALA 400.0401
ALA 410.0395
GLY 420.0401
PRO 430.0370
ALA 440.0361
ALA 450.0346
ALA 460.0322
VAL 470.0272
GLU 480.0221
ALA 490.0215
ALA 500.0171
GLU 510.0097
GLU 520.0082
GLN 530.0053
THR 540.0036
GLU 550.0009
PHE 560.0013
ASP 570.0015
VAL 580.0028
VAL 590.0035
LEU 600.0048
ALA 610.0050
SER 620.0063
PHE 630.0073
GLY 640.0085
GLU 650.0099
ASN 660.0099
LYS 670.0091
VAL 680.0098
ALA 690.0094
VAL 700.0080
ILE 710.0081
LYS 720.0087
ALA 730.0075
VAL 740.0065
ARG 750.0073
GLY 760.0072
ALA 770.0057
THR 780.0055
GLY 790.0068
LEU 800.0071
GLY 810.0086
LEU 820.0091
LYS 830.0088
GLU 840.0074
ALA 850.0071
LYS 860.0078
ASP 870.0068
LEU 880.0057
VAL 890.0064
GLU 900.0065
SER 910.0051
ALA 920.0048
PRO 930.0040
ALA 940.0037
VAL 950.0031
LEU 960.0038
LYS 970.0028
GLU 980.0016
GLY 990.0009
VAL 1000.0009
ASN 1010.0006
LYS 1020.0023
ASP 1030.0027
GLU 1040.0025
ALA 1050.0029
GLU 1060.0041
THR 1070.0045
LEU 1080.0046
LYS 1090.0052
LYS 1100.0063
SER 1110.0066
LEU 1120.0066
GLU 1130.0074
GLU 1140.0084
ALA 1150.0085
GLY 1160.0086
ALA 1170.0073
SER 1180.0065
VAL 1190.0053
GLU 1200.0044
ILE 1210.0033
LYS 1220.0028
GLU 1230.0022
ALA 1240.0010
ALA 1250.0011
ALA 1260.0009
LYS 1270.0014
ALA 1280.0015
TYR 1290.0019
LYS 1300.0022
ILE 1310.0024
ILE 1320.0028
SER 1330.0030
LEU 1340.0034
LYS 1350.0036
TYR 1360.0038
THR 1370.0039
ARG 1380.0038
LYS 1390.0039
VAL 1400.0039
CYS 1410.0039
ILE 1420.0040
GLY 1430.0041
PRO 1440.0043
GLY 1450.0044
PRO 1460.0048
GLY 1470.0051
LYS 1480.0050
ALA 1490.0049
TYR 1500.0046
LYS 1510.0045
ILE 1520.0044
ILE 1530.0043
SER 1540.0041
LEU 1550.0040
LYS 1560.0038
TYR 1570.0036
THR 1580.0033
ARG 1590.0031
LYS 1600.0028
VAL 1610.0026
CYS 1620.0020
GLY 1630.0017
PRO 1640.0018
GLY 1650.0014
PRO 1660.0017
GLY 1670.0019
GLY 1680.0021
LYS 1690.0022
ALA 1700.0022
TYR 1710.0026
LYS 1720.0028
ILE 1730.0029
ILE 1740.0033
SER 1750.0034
LEU 1760.0038
LYS 1770.0040
TYR 1780.0041
THR 1790.0043
ARG 1800.0045
LYS 1810.0046
VAL 1820.0048
GLY 1830.0048
PRO 1840.0049
GLY 1850.0046
PRO 1860.0044
GLY 1870.0043
ILE 1880.0041
ILE 1890.0041
SER 1900.0040
LEU 1910.0040
LYS 1920.0037
TYR 1930.0036
THR 1940.0034
ARG 1950.0032
LYS 1960.0029
VAL 1970.0028
CYS 1980.0024
ILE 1990.0025
GLN 2000.0022
LEU 2010.0021
GLY 2020.0020
GLY 2030.0019
PRO 2040.0020
GLY 2050.0021
PRO 2060.0021
GLY 2070.0022
ASN 2080.0025
ILE 2090.0026
LYS 2100.0027
THR 2110.0029
ALA 2120.0032
PHE 2130.0031
HIS 2140.0031
CYS 2150.0034
TYR 2160.0036
ALA 2170.0034
ALA 2180.0034
TYR 2190.0036
MET 2200.0036
THR 2210.0035
SER 2220.0036
ILE 2230.0036
LYS 2240.0035
ALA 2250.0035
CYS 2260.0022
ASP 2270.0020
LEU 2280.0032
LYS 2290.0071
LYS 2300.0090
PRO 2310.0108
LEU 2320.0132
MET 2330.0130
GLU 2340.0154
SER 2350.0164
GLY 2360.0130
TRP 2370.0123
SER 2380.0112
ASP 2390.0107
THR 2400.0090
ALA 2410.0098
HIS 2420.0098
GLY 2430.0114
LYS 2440.0194
LYS 2450.0211
SER 2460.0206
LEU 2470.0142
PRO 2480.0142
SER 2490.0138
SER 2500.0082
SER 2510.0061
SER 2520.0078
TYR 2530.0067
SER 2540.0071
TYR 2550.0067
ARG 2560.0065
ARG 2570.0079
LYS 2580.0060
LEU 2590.0087
THR 2600.0069
ASN 2610.0093
PRO 2620.0086
ALA 2630.0077
ASN 2640.0046
LYS 2650.0081
GLU 2660.0084
GLU 2670.0123
SER 2680.0127
ILE 2690.0153
LYS 2700.0175
LYS 2710.0157
GLN 2720.0174
LYS 2730.0135
TYR 2740.0147
SER 2750.0121
TYR 2760.0124
PRO 2770.0094
TRP 2780.0101
GLN 2790.0095
THR 2800.0070
SER 2810.0066
LYS 2820.0173
CYS 2830.0237
PHE 2840.0417
ASP 2880.0191
TYR 2890.0099
GLN 2900.0229
TYR 2910.0316
CYS 2970.0095
ASN 2980.0089
PRO 2990.0072
GLY 3000.0075
LYS 3010.0063
LYS 3020.0043
ASN 3030.0029
THR 3040.0029
ILE 3050.0017
SER 3060.0005
GLY 3070.0009
TYR 3080.0017
LYS 3090.0019
ARG 3100.0016
MET 3110.0022
MET 3120.0028
ALA 3130.0028
THR 3140.0028
LYS 3150.0032
ASP 3160.0036
SER 3170.0033
PHE 3180.0033
GLN 3190.0034
SER 3200.0034
PHE 3210.0035
ASN 3220.0032
LEU 3230.0032
THR 3240.0029
GLU 3250.0030
PRO 3260.0033
HIS 3270.0035
ILE 3280.0039
THR 3290.0042
THR 3300.0046
ASN 3310.0046
LYS 3320.0041
LEU 3330.0039
GLU 3340.0035
TRP 3350.0033
ILE 3360.0030
ASP 3370.0031
PRO 3380.0028
ASP 3390.0030
GLY 3400.0031
ASN 3410.0034
THR 3420.0036
ARG 3430.0038
GLY 3440.0041
GLY 3450.0045
GLY 3460.0047
GLY 10.0006
SER 20.0008
HIS 30.0010
SER 40.0012
MET 50.0014
ARG 60.0015
TYR 70.0016
PHE 80.0016
PHE 90.0018
THR 100.0018
SER 110.0018
VAL 120.0018
SER 130.0019
ARG 140.0018
PRO 150.0019
GLY 160.0020
ARG 170.0019
GLY 180.0019
GLU 190.0020
PRO 200.0019
ARG 210.0018
PHE 220.0018
ILE 230.0017
ALA 240.0017
VAL 250.0016
GLY 260.0015
TYR 270.0013
VAL 280.0012
ASP 290.0010
ASP 300.0010
THR 310.0011
GLN 320.0013
PHE 330.0014
VAL 340.0016
ARG 350.0017
PHE 360.0017
ASP 370.0018
SER 380.0019
ASP 390.0018
ALA 400.0018
ALA 410.0020
SER 420.0020
GLN 430.0020
ARG 440.0020
MET 450.0018
GLU 460.0018
PRO 470.0016
ARG 480.0014
ALA 490.0013
PRO 500.0014
TRP 510.0014
ILE 520.0015
GLU 530.0016
GLN 540.0017
GLU 550.0018
GLY 560.0019
PRO 570.0020
GLU 580.0021
TYR 590.0019
TRP 600.0019
ASP 610.0021
GLY 620.0020
GLU 630.0019
THR 640.0020
ARG 650.0021
LYS 660.0020
VAL 670.0019
LYS 680.0021
ALA 690.0022
HIS 700.0020
SER 710.0019
GLN 720.0021
THR 730.0023
HIS 740.0020
ARG 750.0019
VAL 760.0023
ASP 770.0022
LEU 780.0021
GLY 790.0023
THR 800.0025
LEU 810.0023
ARG 820.0021
GLY 830.0024
TYR 840.0025
TYR 850.0024
ASN 860.0021
GLN 870.0018
SER 880.0014
GLU 890.0011
ALA 900.0010
GLY 910.0018
SER 920.0018
HIS 930.0019
THR 940.0019
VAL 950.0019
GLN 960.0019
ARG 970.0019
MET 980.0018
TYR 990.0018
GLY 1000.0016
CYS 1010.0015
ASP 1020.0013
VAL 1030.0012
GLY 1040.0010
SER 1050.0008
ASP 1060.0009
TRP 1070.0011
ARG 1080.0012
PHE 1090.0014
LEU 1100.0013
ARG 1110.0015
GLY 1120.0017
TYR 1130.0018
HIS 1140.0020
GLN 1150.0020
TYR 1160.0021
ALA 1170.0021
TYR 1180.0021
ASP 1190.0020
GLY 1200.0019
LYS 1210.0021
ASP 1220.0022
TYR 1230.0023
ILE 1240.0024
ALA 1250.0023
LEU 1260.0022
LYS 1270.0022
GLU 1280.0020
ASP 1290.0021
LEU 1300.0022
ARG 1310.0024
SER 1320.0026
TRP 1330.0025
THR 1340.0025
ALA 1350.0027
ALA 1360.0027
ASP 1370.0028
MET 1380.0030
ALA 1390.0029
ALA 1400.0028
GLN 1410.0030
THR 1420.0031
THR 1430.0029
LYS 1440.0029
HIS 1450.0031
LYS 1460.0031
TRP 1470.0028
GLU 1480.0030
ALA 1490.0032
ALA 1500.0030
HIS 1510.0029
VAL 1520.0027
ALA 1530.0025
GLU 1540.0025
GLN 1550.0025
LEU 1560.0022
ARG 1570.0022
ALA 1580.0022
TYR 1590.0020
LEU 1600.0019
GLU 1610.0018
GLY 1620.0018
THR 1630.0019
CYS 1640.0017
VAL 1650.0015
GLU 1660.0016
TRP 1670.0016
LEU 1680.0014
ARG 1690.0013
ARG 1700.0015
TYR 1710.0014
LEU 1720.0012
GLU 1730.0013
ASN 1740.0014
GLY 1750.0012
LYS 1760.0011
GLU 1770.0010
THR 1780.0009
LEU 1790.0009
GLN 1800.0008
ARG 1810.0007
THR 1820.0005
ASP 1830.0004
ALA 1840.0004
PRO 1850.0004
LYS 1860.0005
THR 1870.0007
HIS 1880.0010
MET 1890.0012
THR 1900.0013
HIS 1910.0017
HIS 1920.0019
ALA 1930.0023
VAL 1940.0025
SER 1950.0028
ASP 1960.0030
HIS 1970.0031
GLU 1980.0028
ALA 1990.0023
THR 2000.0020
LEU 2010.0017
ARG 2020.0014
CYS 2030.0012
TRP 2040.0008
ALA 2050.0006
LEU 2060.0004
SER 2070.0004
PHE 2080.0004
TYR 2090.0005
PRO 2100.0006
ALA 2110.0007
GLU 2120.0007
ILE 2130.0006
THR 2140.0008
LEU 2150.0010
THR 2160.0013
TRP 2170.0016
GLN 2180.0018
ARG 2190.0022
ASP 2200.0023
GLY 2210.0020
GLU 2220.0020
ASP 2230.0018
GLN 2240.0020
THR 2250.0019
GLN 2260.0022
ASP 2270.0022
THR 2280.0018
GLU 2290.0017
LEU 2300.0014
VAL 2310.0013
GLU 2320.0012
THR 2330.0009
ARG 2340.0010
PRO 2350.0009
ALA 2360.0008
GLY 2370.0010
ASP 2380.0009
GLY 2390.0009
THR 2400.0006
PHE 2410.0006
GLN 2420.0006
LYS 2430.0008
TRP 2440.0010
ALA 2450.0013
ALA 2460.0016
VAL 2470.0020
VAL 2480.0023
VAL 2490.0025
PRO 2500.0028
SER 2510.0028
GLY 2520.0029
GLN 2530.0027
GLU 2540.0024
GLN 2550.0024
ARG 2560.0024
TYR 2570.0020
THR 2580.0017
CYS 2590.0014
HIS 2600.0011
VAL 2610.0008
GLN 2620.0007
HIS 2630.0004
GLU 2640.0003
GLY 2650.0004
LEU 2660.0006
PRO 2670.0008
LYS 2680.0009
PRO 2690.0009
LEU 2700.0010
THR 2710.0013
LEU 2720.0014
ARG 2730.0018
TRP 2740.0018
GLU 2750.0021
PRO 2760.0021
GLN 2780.0023
ARG 2790.0020
THR 2800.0021
PRO 2810.0018
LYS 2820.0016
ILE 2830.0016
GLN 2840.0013
VAL 2850.0013
TYR 2860.0010
SER 2870.0009
ARG 2880.0008
HIS 2890.0006
PRO 2900.0004
ALA 2910.0005
GLU 2920.0005
ASN 2930.0006
GLY 2940.0009
LYS 2950.0010
SER 2960.0012
ASN 2970.0010
PHE 2980.0011
LEU 2990.0012
ASN 3000.0012
CYS 3010.0014
TYR 3020.0014
VAL 3030.0016
SER 3040.0015
GLY 3050.0015
PHE 3060.0018
HIS 3070.0019
PRO 3080.0020
SER 3090.0020
ASP 3100.0023
ILE 3110.0023
GLU 3120.0025
VAL 3130.0023
ASP 3140.0022
LEU 3150.0019
LEU 3160.0020
LYS 3170.0019
ASN 3180.0019
GLY 3190.0022
GLU 3200.0024
ARG 3210.0024
ILE 3220.0022
GLU 3230.0024
LYS 3240.0023
VAL 3250.0020
GLU 3260.0019
HIS 3270.0017
SER 3280.0014
ASP 3290.0016
LEU 3300.0016
SER 3310.0016
PHE 3320.0015
SER 3330.0015
LYS 3340.0015
ASP 3350.0017
TRP 3360.0018
SER 3370.0017
PHE 3380.0016
TYR 3390.0015
LEU 3400.0015
LEU 3410.0014
TYR 3420.0016
TYR 3430.0015
THR 3440.0016
GLU 3450.0015
PHE 3460.0014
THR 3470.0012
PRO 3480.0010
THR 3490.0009
GLU 3500.0008
LYS 3510.0011
ASP 3520.0013
GLU 3530.0015
TYR 3540.0015
ALA 3550.0018
CYS 3560.0019
ARG 3570.0023
VAL 3580.0024
ASN 3590.0027
HIS 3600.0026
VAL 3610.0027
THR 3620.0025
LEU 3630.0030
SER 3640.0038
GLN 3650.0038
PRO 3660.0033
LYS 3670.0028
ILE 3680.0023
VAL 3690.0019
LYS 3700.0017
TRP 3710.0013
ASP 3720.0011
ARG 3730.0008
ASP 3740.0009
MET 3750.0011
SER 10.0024
GLN 20.0021
PHE 30.0021
ARG 40.0022
VAL 50.0023
SER 60.0023
PRO 70.0025
LEU 80.0028
ASP 90.0029
ARG 100.0029
THR 110.0029
TRP 120.0027
ASN 130.0027
LEU 140.0026
GLY 150.0023
GLU 160.0022
THR 170.0020
VAL 180.0021
GLU 190.0019
LEU 200.0020
LYS 210.0019
CYS 220.0019
GLN 230.0018
VAL 240.0017
LEU 250.0018
LEU 260.0017
SER 270.0015
ASN 280.0014
PRO 290.0015
THR 300.0015
SER 310.0016
GLY 320.0015
CYS 330.0017
SER 340.0019
TRP 350.0020
LEU 360.0024
PHE 370.0026
GLN 380.0030
PRO 390.0031
ARG 400.0034
GLY 410.0037
ALA 420.0041
ALA 430.0040
ALA 440.0036
SER 450.0034
PRO 460.0030
THR 470.0028
PHE 480.0024
LEU 490.0021
LEU 500.0018
TYR 510.0017
LEU 520.0014
SER 530.0012
GLN 540.0008
ASN 550.0010
LYS 560.0011
PRO 570.0013
LYS 580.0017
ALA 590.0018
ALA 600.0022
GLU 610.0025
GLY 620.0025
LEU 630.0022
ASP 640.0019
THR 650.0015
GLN 660.0014
ARG 670.0016
PHE 680.0017
SER 690.0014
GLY 700.0013
LYS 710.0011
ARG 720.0010
LEU 730.0010
GLY 740.0010
ASP 750.0013
THR 760.0014
PHE 770.0015
VAL 780.0015
LEU 790.0017
THR 800.0017
LEU 810.0019
SER 820.0018
ASP 830.0020
PHE 840.0023
ARG 850.0026
ARG 860.0029
GLU 870.0028
ASN 880.0026
GLU 890.0029
GLY 900.0029
TYR 910.0028
TYR 920.0025
PHE 930.0024
CYS 940.0022
SER 950.0022
ALA 960.0019
LEU 970.0020
SER 980.0019
ASN 990.0020
SER 1000.0023
ILE 1010.0025
MET 1020.0024
TYR 1030.0024
PHE 1040.0025
SER 1050.0025
HIS 1060.0027
PHE 1070.0028
VAL 1080.0026
PRO 1090.0029
VAL 1100.0027
PHE 1110.0030
LEU 1120.0031
PRO 1130.0032
ALA 1140.0035
SER 10.0036
GLN 20.0036
PHE 30.0039
ARG 40.0043
VAL 50.0045
SER 60.0049
PRO 70.0052
LEU 80.0051
ASP 90.0055
ARG 100.0056
THR 110.0057
TRP 120.0057
ASN 130.0060
LEU 140.0059
GLY 150.0059
GLU 160.0058
THR 170.0054
VAL 180.0052
GLU 190.0050
LEU 200.0047
LYS 210.0045
CYS 220.0042
GLN 230.0042
VAL 240.0038
LEU 250.0039
LEU 260.0035
SER 270.0035
ASN 280.0033
PRO 290.0034
THR 300.0033
SER 310.0029
GLY 320.0031
CYS 330.0033
SER 340.0032
TRP 350.0036
LEU 360.0035
PHE 370.0038
GLN 380.0038
PRO 390.0042
ARG 400.0044
GLY 410.0041
ALA 420.0037
ALA 430.0034
ALA 440.0035
SER 450.0032
PRO 460.0032
THR 470.0033
PHE 480.0032
LEU 490.0035
LEU 500.0034
TYR 510.0031
LEU 520.0034
SER 530.0032
GLN 540.0032
ASN 550.0031
LYS 560.0032
PRO 570.0033
LYS 580.0030
ALA 590.0032
ALA 600.0031
GLU 610.0030
GLY 620.0034
LEU 630.0037
ASP 640.0041
THR 650.0040
GLN 660.0045
ARG 670.0046
PHE 680.0043
SER 690.0042
GLY 700.0041
LYS 710.0041
ARG 720.0041
LEU 730.0044
GLY 740.0043
ASP 750.0041
THR 760.0043
PHE 770.0041
VAL 780.0044
LEU 790.0043
THR 800.0046
LEU 810.0048
SER 820.0051
ASP 830.0054
PHE 840.0053
ARG 850.0053
ARG 860.0054
GLU 870.0049
ASN 880.0047
GLU 890.0049
GLY 900.0045
TYR 910.0042
TYR 920.0041
PHE 930.0038
CYS 940.0036
SER 950.0031
ALA 960.0030
LEU 970.0026
SER 980.0026
ASN 990.0023
SER 1000.0020
ILE 1010.0023
MET 1020.0025
TYR 1030.0029
PHE 1040.0032
SER 1050.0036
HIS 1060.0039
PHE 1070.0041
VAL 1080.0045
PRO 1090.0047
VAL 1100.0049
PHE 1110.0052
LEU 1120.0057
PRO 1130.0060
ALA 1140.0061

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.