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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0480
MET 10.0069
SER 20.0056
THR 30.0038
ILE 40.0030
THR 50.0024
LYS 60.0028
ASP 70.0041
GLN 80.0041
ILE 90.0032
LEU 100.0046
GLU 110.0055
GLY 120.0048
VAL 130.0048
ALA 140.0062
ALA 150.0064
LEU 160.0055
SER 170.0060
VAL 180.0060
MET 190.0055
GLU 200.0049
ILE 210.0048
VAL 220.0048
GLU 230.0043
LEU 240.0038
ILE 250.0038
SER 260.0040
ALA 270.0037
MET 280.0029
GLU 290.0031
GLU 300.0032
LYS 310.0029
PHE 320.0024
GLY 330.0025
VAL 340.0027
SER 350.0033
ALA 360.0035
ALA 370.0041
ALA 380.0039
VAL 390.0043
ALA 400.0058
ALA 410.0064
GLY 420.0057
PRO 430.0035
ALA 440.0052
ALA 450.0057
ALA 460.0045
VAL 470.0088
GLU 480.0091
ALA 490.0064
ALA 500.0105
GLU 510.0131
GLU 520.0126
GLN 530.0115
THR 540.0186
GLU 550.0172
PHE 560.0153
ASP 570.0140
VAL 580.0172
VAL 590.0124
LEU 600.0156
ALA 610.0139
SER 620.0186
PHE 630.0242
GLY 640.0318
GLU 650.0368
ASN 660.0397
LYS 670.0332
VAL 680.0403
ALA 690.0439
VAL 700.0360
ILE 710.0361
LYS 720.0447
ALA 730.0424
VAL 740.0357
ARG 750.0425
GLY 760.0480
ALA 770.0414
THR 780.0392
GLY 790.0474
LEU 800.0434
GLY 810.0465
LEU 820.0437
LYS 830.0382
GLU 840.0347
ALA 850.0330
LYS 860.0289
ASP 870.0233
LEU 880.0210
VAL 890.0206
GLU 900.0153
SER 910.0097
ALA 920.0087
PRO 930.0059
ALA 940.0101
VAL 950.0137
LEU 960.0215
LYS 970.0241
GLU 980.0214
GLY 990.0227
VAL 1000.0262
ASN 1010.0279
LYS 1020.0263
ASP 1030.0349
GLU 1040.0351
ALA 1050.0279
GLU 1060.0329
THR 1070.0397
LEU 1080.0350
LYS 1090.0319
LYS 1100.0405
SER 1110.0431
LEU 1120.0362
GLU 1130.0383
GLU 1140.0467
ALA 1150.0432
GLY 1160.0396
ALA 1170.0307
SER 1180.0264
VAL 1190.0222
GLU 1200.0166
ILE 1210.0152
LYS 1220.0084
GLU 1230.0068
ALA 1240.0094
ALA 1250.0087
ALA 1260.0067
LYS 1270.0077
ALA 1280.0072
TYR 1290.0074
LYS 1300.0078
ILE 1310.0059
ILE 1320.0065
SER 1330.0041
LEU 1340.0046
LYS 1350.0041
TYR 1360.0038
THR 1370.0046
ARG 1380.0031
LYS 1390.0061
VAL 1400.0063
CYS 1410.0089
ILE 1420.0113
GLY 1430.0129
PRO 1440.0172
GLY 1450.0194
PRO 1460.0232
GLY 1470.0277
LYS 1480.0278
ALA 1490.0275
TYR 1500.0233
LYS 1510.0228
ILE 1520.0194
ILE 1530.0176
SER 1540.0148
LEU 1550.0125
LYS 1560.0103
TYR 1570.0083
THR 1580.0065
ARG 1590.0059
LYS 1600.0045
VAL 1610.0054
CYS 1620.0044
GLY 1630.0058
PRO 1640.0080
GLY 1650.0064
PRO 1660.0063
GLY 1670.0112
GLY 1680.0126
LYS 1690.0133
ALA 1700.0114
TYR 1710.0110
LYS 1720.0110
ILE 1730.0105
ILE 1740.0114
SER 1750.0123
LEU 1760.0143
LYS 1770.0162
TYR 1780.0188
THR 1790.0209
ARG 1800.0236
LYS 1810.0253
VAL 1820.0280
GLY 1830.0289
PRO 1840.0287
GLY 1850.0245
PRO 1860.0193
GLY 1870.0174
ILE 1880.0136
ILE 1890.0116
SER 1900.0092
LEU 1910.0064
LYS 1920.0055
TYR 1930.0027
THR 1940.0018
ARG 1950.0025
LYS 1960.0035
VAL 1970.0059
CYS 1980.0060
ILE 1990.0084
GLN 2000.0091
LEU 2010.0084
GLY 2020.0076
GLY 2030.0066
PRO 2040.0065
GLY 2050.0067
PRO 2060.0064
GLY 2070.0064
ASN 2080.0069
ILE 2090.0071
LYS 2100.0067
THR 2110.0071
ALA 2120.0078
PHE 2130.0070
HIS 2140.0061
CYS 2150.0069
TYR 2160.0069
ALA 2170.0055
ALA 2180.0054
TYR 2190.0059
MET 2200.0048
THR 2210.0035
SER 2220.0042
ILE 2230.0035
LYS 2240.0034
ALA 2250.0026
CYS 2260.0019
ASP 2270.0018
LEU 2280.0033
LYS 2290.0026
LYS 2300.0048
PRO 2310.0048
LEU 2320.0052
MET 2330.0055
GLU 2340.0081
SER 2350.0088
GLY 2360.0093
TRP 2370.0081
SER 2380.0074
ASP 2390.0063
THR 2400.0063
ALA 2410.0049
HIS 2420.0059
GLY 2430.0059
LYS 2440.0116
LYS 2450.0112
SER 2460.0080
LEU 2470.0034
PRO 2480.0027
SER 2490.0032
SER 2500.0077
SER 2510.0092
SER 2520.0088
TYR 2530.0069
SER 2540.0067
TYR 2550.0051
ARG 2560.0049
ARG 2570.0047
LYS 2580.0054
LEU 2590.0066
THR 2600.0083
ASN 2610.0101
PRO 2620.0127
ALA 2630.0133
ASN 2640.0120
LYS 2650.0100
GLU 2660.0075
GLU 2670.0060
SER 2680.0050
ILE 2690.0056
LYS 2700.0067
LYS 2710.0076
GLN 2720.0085
LYS 2730.0085
TYR 2740.0088
SER 2750.0095
TYR 2760.0084
PRO 2770.0049
TRP 2780.0046
GLN 2790.0036
THR 2800.0025
SER 2810.0048
LYS 2820.0097
CYS 2830.0154
PHE 2840.0285
ASP 2880.0085
TYR 2890.0050
GLN 2900.0082
TYR 2910.0103
CYS 2970.0292
ASN 2980.0255
PRO 2990.0217
GLY 3000.0206
LYS 3010.0156
LYS 3020.0136
ASN 3030.0112
THR 3040.0116
ILE 3050.0083
SER 3060.0092
GLY 3070.0062
TYR 3080.0071
LYS 3090.0069
ARG 3100.0038
MET 3110.0041
MET 3120.0063
ALA 3130.0056
THR 3140.0052
LYS 3150.0063
ASP 3160.0072
SER 3170.0060
PHE 3180.0048
GLN 3190.0046
SER 3200.0042
PHE 3210.0038
ASN 3220.0028
LEU 3230.0024
THR 3240.0022
GLU 3250.0020
PRO 3260.0019
HIS 3270.0030
ILE 3280.0031
THR 3290.0040
THR 3300.0043
ASN 3310.0049
LYS 3320.0036
LEU 3330.0032
GLU 3340.0033
TRP 3350.0029
ILE 3360.0029
ASP 3370.0033
PRO 3380.0031
ASP 3390.0037
GLY 3400.0042
ASN 3410.0046
THR 3420.0050
ARG 3430.0064
GLY 3440.0076
GLY 3450.0091
GLY 3460.0103
GLY 10.0040
SER 20.0042
HIS 30.0046
SER 40.0049
MET 50.0054
ARG 60.0055
TYR 70.0059
PHE 80.0058
PHE 90.0062
THR 100.0063
SER 110.0064
VAL 120.0061
SER 130.0061
ARG 140.0057
PRO 150.0058
GLY 160.0051
ARG 170.0051
GLY 180.0055
GLU 190.0058
PRO 200.0058
ARG 210.0064
PHE 220.0064
ILE 230.0061
ALA 240.0061
VAL 250.0058
GLY 260.0059
TYR 270.0054
VAL 280.0052
ASP 290.0047
ASP 300.0045
THR 310.0049
GLN 320.0053
PHE 330.0057
VAL 340.0061
ARG 350.0062
PHE 360.0064
ASP 370.0064
SER 380.0066
ASP 390.0066
ALA 400.0065
ALA 410.0071
SER 420.0071
GLN 430.0072
ARG 440.0071
MET 450.0068
GLU 460.0066
PRO 470.0063
ARG 480.0058
ALA 490.0057
PRO 500.0059
TRP 510.0061
ILE 520.0063
GLU 530.0066
GLN 540.0068
GLU 550.0070
GLY 560.0074
PRO 570.0077
GLU 580.0077
TYR 590.0073
TRP 600.0073
ASP 610.0077
GLY 620.0075
GLU 630.0071
THR 640.0073
ARG 650.0076
LYS 660.0072
VAL 670.0069
LYS 680.0073
ALA 690.0074
HIS 700.0069
SER 710.0069
GLN 720.0073
THR 730.0073
HIS 740.0070
ARG 750.0071
VAL 760.0074
ASP 770.0072
LEU 780.0069
GLY 790.0073
THR 800.0076
LEU 810.0072
ARG 820.0069
GLY 830.0076
TYR 840.0079
TYR 850.0076
ASN 860.0069
GLN 870.0066
SER 880.0057
GLU 890.0051
ALA 900.0053
GLY 910.0062
SER 920.0061
HIS 930.0063
THR 940.0063
VAL 950.0066
GLN 960.0064
ARG 970.0064
MET 980.0059
TYR 990.0060
GLY 1000.0057
CYS 1010.0054
ASP 1020.0049
VAL 1030.0049
GLY 1040.0045
SER 1050.0044
ASP 1060.0049
TRP 1070.0052
ARG 1080.0053
PHE 1090.0053
LEU 1100.0049
ARG 1110.0050
GLY 1120.0055
TYR 1130.0056
HIS 1140.0061
GLN 1150.0061
TYR 1160.0066
ALA 1170.0065
TYR 1180.0067
ASP 1190.0065
GLY 1200.0062
LYS 1210.0063
ASP 1220.0063
TYR 1230.0068
ILE 1240.0067
ALA 1250.0064
LEU 1260.0061
LYS 1270.0055
GLU 1280.0050
ASP 1290.0054
LEU 1300.0060
ARG 1310.0065
SER 1320.0065
TRP 1330.0065
THR 1340.0062
ALA 1350.0068
ALA 1360.0067
ASP 1370.0073
MET 1380.0080
ALA 1390.0080
ALA 1400.0076
GLN 1410.0078
THR 1420.0084
THR 1430.0080
LYS 1440.0077
HIS 1450.0084
LYS 1460.0086
TRP 1470.0081
GLU 1480.0080
ALA 1490.0087
ALA 1500.0087
HIS 1510.0081
VAL 1520.0078
ALA 1530.0072
GLU 1540.0074
GLN 1550.0077
LEU 1560.0070
ARG 1570.0067
ALA 1580.0070
TYR 1590.0069
LEU 1600.0063
GLU 1610.0062
GLY 1620.0066
THR 1630.0068
CYS 1640.0063
VAL 1650.0060
GLU 1660.0064
TRP 1670.0063
LEU 1680.0058
ARG 1690.0059
ARG 1700.0062
TYR 1710.0060
LEU 1720.0055
GLU 1730.0059
ASN 1740.0061
GLY 1750.0057
LYS 1760.0055
GLU 1770.0053
THR 1780.0051
LEU 1790.0050
GLN 1800.0048
ARG 1810.0046
THR 1820.0039
ASP 1830.0038
ALA 1840.0031
PRO 1850.0027
LYS 1860.0028
THR 1870.0019
HIS 1880.0015
MET 1890.0010
THR 1900.0015
HIS 1910.0017
HIS 1920.0031
ALA 1930.0038
VAL 1940.0051
SER 1950.0058
ASP 1960.0057
HIS 1970.0057
GLU 1980.0051
ALA 1990.0038
THR 2000.0033
LEU 2010.0020
ARG 2020.0019
CYS 2030.0013
TRP 2040.0020
ALA 2050.0024
LEU 2060.0031
SER 2070.0036
PHE 2080.0035
TYR 2090.0039
PRO 2100.0038
ALA 2110.0038
GLU 2120.0031
ILE 2130.0023
THR 2140.0015
LEU 2150.0013
THR 2160.0008
TRP 2170.0016
GLN 2180.0025
ARG 2190.0037
ASP 2200.0044
GLY 2210.0038
GLU 2220.0038
ASP 2230.0028
GLN 2240.0033
THR 2250.0032
GLN 2260.0043
ASP 2270.0043
THR 2280.0031
GLU 2290.0036
LEU 2300.0033
VAL 2310.0038
GLU 2320.0042
THR 2330.0041
ARG 2340.0044
PRO 2350.0046
ALA 2360.0043
GLY 2370.0049
ASP 2380.0048
GLY 2390.0048
THR 2400.0042
PHE 2410.0041
GLN 2420.0035
LYS 2430.0031
TRP 2440.0026
ALA 2450.0023
ALA 2460.0027
VAL 2470.0032
VAL 2480.0042
VAL 2490.0041
PRO 2500.0051
SER 2510.0046
GLY 2520.0046
GLN 2530.0044
GLU 2540.0031
GLN 2550.0033
ARG 2560.0037
TYR 2570.0026
THR 2580.0018
CYS 2590.0007
HIS 2600.0007
VAL 2610.0009
GLN 2620.0013
HIS 2630.0021
GLU 2640.0028
GLY 2650.0033
LEU 2660.0028
PRO 2670.0032
LYS 2680.0025
PRO 2690.0016
LEU 2700.0016
THR 2710.0019
LEU 2720.0015
ARG 2730.0019
TRP 2740.0015
GLU 2750.0024
PRO 2760.0032
GLN 2780.0060
ARG 2790.0059
THR 2800.0056
PRO 2810.0054
LYS 2820.0055
ILE 2830.0048
GLN 2840.0045
VAL 2850.0043
TYR 2860.0041
SER 2870.0040
ARG 2880.0041
HIS 2890.0039
PRO 2900.0037
ALA 2910.0038
GLU 2920.0037
ASN 2930.0037
GLY 2940.0037
LYS 2950.0038
SER 2960.0039
ASN 2970.0040
PHE 2980.0041
LEU 2990.0041
ASN 3000.0043
CYS 3010.0044
TYR 3020.0046
VAL 3030.0048
SER 3040.0051
GLY 3050.0055
PHE 3060.0054
HIS 3070.0057
PRO 3080.0057
SER 3090.0052
ASP 3100.0045
ILE 3110.0039
GLU 3120.0030
VAL 3130.0038
ASP 3140.0037
LEU 3150.0038
LEU 3160.0037
LYS 3170.0037
ASN 3180.0036
GLY 3190.0037
GLU 3200.0036
ARG 3210.0037
ILE 3220.0037
GLU 3230.0037
LYS 3240.0039
VAL 3250.0041
GLU 3260.0044
HIS 3270.0047
SER 3280.0050
ASP 3290.0054
LEU 3300.0055
SER 3310.0054
PHE 3320.0053
SER 3330.0053
LYS 3340.0052
ASP 3350.0053
TRP 3360.0058
SER 3370.0057
PHE 3380.0053
TYR 3390.0050
LEU 3400.0048
LEU 3410.0045
TYR 3420.0043
TYR 3430.0043
THR 3440.0042
GLU 3450.0041
PHE 3460.0040
THR 3470.0038
PRO 3480.0038
THR 3490.0037
GLU 3500.0037
LYS 3510.0036
ASP 3520.0037
GLU 3530.0039
TYR 3540.0039
ALA 3550.0039
CYS 3560.0039
ARG 3570.0037
VAL 3580.0033
ASN 3590.0029
HIS 3600.0036
VAL 3610.0037
THR 3620.0053
LEU 3630.0068
SER 3640.0083
GLN 3650.0064
PRO 3660.0040
LYS 3670.0054
ILE 3680.0041
VAL 3690.0041
LYS 3700.0040
TRP 3710.0040
ASP 3720.0041
ARG 3730.0038
ASP 3740.0037
MET 3750.0036
SER 10.0059
GLN 20.0050
PHE 30.0044
ARG 40.0045
VAL 50.0038
SER 60.0032
PRO 70.0030
LEU 80.0040
ASP 90.0041
ARG 100.0028
THR 110.0015
TRP 120.0006
ASN 130.0013
LEU 140.0026
GLY 150.0030
GLU 160.0021
THR 170.0021
VAL 180.0009
GLU 190.0008
LEU 200.0007
LYS 210.0018
CYS 220.0025
GLN 230.0032
VAL 240.0033
LEU 250.0044
LEU 260.0045
SER 270.0046
ASN 280.0037
PRO 290.0028
THR 300.0021
SER 310.0018
GLY 320.0011
CYS 330.0015
SER 340.0027
TRP 350.0026
LEU 360.0041
PHE 370.0046
GLN 380.0057
PRO 390.0059
ARG 400.0063
GLY 410.0087
ALA 420.0106
ALA 430.0111
ALA 440.0093
SER 450.0090
PRO 460.0070
THR 470.0065
PHE 480.0056
LEU 490.0046
LEU 500.0037
TYR 510.0029
LEU 520.0019
SER 530.0015
GLN 540.0021
ASN 550.0034
LYS 560.0048
PRO 570.0041
LYS 580.0050
ALA 590.0055
ALA 600.0064
GLU 610.0082
GLY 620.0083
LEU 630.0066
ASP 640.0063
THR 650.0060
GLN 660.0060
ARG 670.0046
PHE 680.0038
SER 690.0034
GLY 700.0023
LYS 710.0021
ARG 720.0017
LEU 730.0029
GLY 740.0030
ASP 750.0026
THR 760.0023
PHE 770.0009
VAL 780.0008
LEU 790.0009
THR 800.0018
LEU 810.0024
SER 820.0032
ASP 830.0036
PHE 840.0027
ARG 850.0037
ARG 860.0040
GLU 870.0049
ASN 880.0039
GLU 890.0037
GLY 900.0041
TYR 910.0041
TYR 920.0031
PHE 930.0034
CYS 940.0030
SER 950.0037
ALA 960.0032
LEU 970.0036
SER 980.0040
ASN 990.0047
SER 1000.0054
ILE 1010.0060
MET 1020.0055
TYR 1030.0053
PHE 1040.0051
SER 1050.0047
HIS 1060.0052
PHE 1070.0045
VAL 1080.0033
PRO 1090.0035
VAL 1100.0023
PHE 1110.0027
LEU 1120.0021
PRO 1130.0016
ALA 1140.0024
SER 10.0121
GLN 20.0120
PHE 30.0128
ARG 40.0147
VAL 50.0148
SER 60.0167
PRO 70.0179
LEU 80.0175
ASP 90.0194
ARG 100.0197
THR 110.0197
TRP 120.0200
ASN 130.0213
LEU 140.0213
GLY 150.0216
GLU 160.0211
THR 170.0196
VAL 180.0180
GLU 190.0173
LEU 200.0158
LYS 210.0151
CYS 220.0138
GLN 230.0140
VAL 240.0124
LEU 250.0133
LEU 260.0116
SER 270.0121
ASN 280.0106
PRO 290.0105
THR 300.0095
SER 310.0077
GLY 320.0085
CYS 330.0093
SER 340.0089
TRP 350.0105
LEU 360.0098
PHE 370.0109
GLN 380.0104
PRO 390.0119
ARG 400.0123
GLY 410.0103
ALA 420.0079
ALA 430.0065
ALA 440.0082
SER 450.0072
PRO 460.0080
THR 470.0089
PHE 480.0086
LEU 490.0103
LEU 500.0100
TYR 510.0088
LEU 520.0097
SER 530.0087
GLN 540.0087
ASN 550.0082
LYS 560.0096
PRO 570.0099
LYS 580.0087
ALA 590.0098
ALA 600.0093
GLU 610.0095
GLY 620.0119
LEU 630.0124
ASP 640.0147
THR 650.0141
GLN 660.0164
ARG 670.0166
PHE 680.0147
SER 690.0141
GLY 700.0134
LYS 710.0134
ARG 720.0129
LEU 730.0147
GLY 740.0142
ASP 750.0135
THR 760.0142
PHE 770.0132
VAL 780.0145
LEU 790.0142
THR 800.0158
LEU 810.0165
SER 820.0184
ASP 830.0197
PHE 840.0188
ARG 850.0187
ARG 860.0183
GLU 870.0163
ASN 880.0156
GLU 890.0157
GLY 900.0138
TYR 910.0127
TYR 920.0124
PHE 930.0113
CYS 940.0105
SER 950.0086
ALA 960.0081
LEU 970.0069
SER 980.0074
ASN 990.0066
SER 1000.0051
ILE 1010.0062
MET 1020.0063
TYR 1030.0081
PHE 1040.0090
SER 1050.0109
HIS 1060.0121
PHE 1070.0124
VAL 1080.0143
PRO 1090.0150
VAL 1100.0161
PHE 1110.0173
LEU 1120.0195
PRO 1130.0209
ALA 1140.0206

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.