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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1069
MET 10.0290
SER 20.0218
THR 30.0138
ILE 40.0104
THR 50.0080
LYS 60.0127
ASP 70.0151
GLN 80.0108
ILE 90.0070
LEU 100.0119
GLU 110.0141
GLY 120.0108
VAL 130.0069
ALA 140.0114
ALA 150.0138
LEU 160.0095
SER 170.0093
VAL 180.0063
MET 190.0107
GLU 200.0104
ILE 210.0063
VAL 220.0097
GLU 230.0120
LEU 240.0083
ILE 250.0093
SER 260.0127
ALA 270.0113
MET 280.0091
GLU 290.0127
GLU 300.0141
LYS 310.0108
PHE 320.0111
GLY 330.0144
VAL 340.0139
SER 350.0143
ALA 360.0153
ALA 370.0145
ALA 380.0124
VAL 390.0135
ALA 400.0152
ALA 410.0136
GLY 420.0131
PRO 430.0101
ALA 440.0108
ALA 450.0085
ALA 460.0062
VAL 470.0051
GLU 480.0056
ALA 490.0074
ALA 500.0082
GLU 510.0086
GLU 520.0081
GLN 530.0069
THR 540.0074
GLU 550.0063
PHE 560.0046
ASP 570.0037
VAL 580.0029
VAL 590.0019
LEU 600.0016
ALA 610.0011
SER 620.0019
PHE 630.0025
GLY 640.0029
GLU 650.0039
ASN 660.0036
LYS 670.0040
VAL 680.0044
ALA 690.0033
VAL 700.0029
ILE 710.0040
LYS 720.0041
ALA 730.0032
VAL 740.0036
ARG 750.0049
GLY 760.0046
ALA 770.0043
THR 780.0052
GLY 790.0062
LEU 800.0063
GLY 810.0071
LEU 820.0066
LYS 830.0070
GLU 840.0063
ALA 850.0052
LYS 860.0053
ASP 870.0053
LEU 880.0042
VAL 890.0036
GLU 900.0042
SER 910.0037
ALA 920.0026
PRO 930.0018
ALA 940.0025
VAL 950.0028
LEU 960.0036
LYS 970.0044
GLU 980.0049
GLY 990.0057
VAL 1000.0056
ASN 1010.0063
LYS 1020.0058
ASP 1030.0059
GLU 1040.0053
ALA 1050.0043
GLU 1060.0040
THR 1070.0039
LEU 1080.0032
LYS 1090.0023
LYS 1100.0023
SER 1110.0020
LEU 1120.0014
GLU 1130.0009
GLU 1140.0008
ALA 1150.0015
GLY 1160.0016
ALA 1170.0014
SER 1180.0012
VAL 1190.0010
GLU 1200.0016
ILE 1210.0028
LYS 1220.0028
GLU 1230.0039
ALA 1240.0041
ALA 1250.0037
ALA 1260.0050
LYS 1270.0048
ALA 1280.0037
TYR 1290.0048
LYS 1300.0038
ILE 1310.0066
ILE 1320.0033
SER 1330.0048
LEU 1340.0018
LYS 1350.0027
TYR 1360.0014
THR 1370.0021
ARG 1380.0057
LYS 1390.0068
VAL 1400.0095
CYS 1410.0130
ILE 1420.0146
GLY 1430.0186
PRO 1440.0183
GLY 1450.0228
PRO 1460.0221
GLY 1470.0148
LYS 1480.0076
ALA 1490.0015
TYR 1500.0015
LYS 1510.0076
ILE 1520.0067
ILE 1530.0111
SER 1540.0114
LEU 1550.0148
LYS 1560.0155
TYR 1570.0166
THR 1580.0174
ARG 1590.0187
LYS 1600.0203
VAL 1610.0204
CYS 1620.0227
GLY 1630.0212
PRO 1640.0266
GLY 1650.0308
PRO 1660.0330
GLY 1670.0363
GLY 1680.0327
LYS 1690.0353
ALA 1700.0310
TYR 1710.0328
LYS 1720.0301
ILE 1730.0300
ILE 1740.0282
SER 1750.0282
LEU 1760.0269
LYS 1770.0258
TYR 1780.0239
THR 1790.0222
ARG 1800.0202
LYS 1810.0179
VAL 1820.0149
GLY 1830.0139
PRO 1840.0118
GLY 1850.0132
PRO 1860.0124
GLY 1870.0060
ILE 1880.0064
ILE 1890.0020
SER 1900.0011
LEU 1910.0050
LYS 1920.0050
TYR 1930.0069
THR 1940.0075
ARG 1950.0091
LYS 1960.0093
VAL 1970.0080
CYS 1980.0078
ILE 1990.0050
GLN 2000.0053
LEU 2010.0023
GLY 2020.0023
GLY 2030.0018
PRO 2040.0013
GLY 2050.0016
PRO 2060.0009
GLY 2070.0009
ASN 2080.0009
ILE 2090.0007
LYS 2100.0007
THR 2110.0013
ALA 2120.0012
PHE 2130.0009
HIS 2140.0012
CYS 2150.0015
TYR 2160.0019
ALA 2170.0016
ALA 2180.0019
TYR 2190.0028
MET 2200.0030
THR 2210.0028
SER 2220.0036
ILE 2230.0047
LYS 2240.0055
ALA 2250.0067
CYS 2260.0106
ASP 2270.0129
LEU 2280.0152
LYS 2290.0181
LYS 2300.0208
PRO 2310.0219
LEU 2320.0205
MET 2330.0167
GLU 2340.0168
SER 2350.0118
GLY 2360.0125
TRP 2370.0127
SER 2380.0096
ASP 2390.0102
THR 2400.0089
ALA 2410.0114
HIS 2420.0294
GLY 2430.0314
LYS 2440.0542
LYS 2450.0541
SER 2460.0396
LEU 2470.0183
PRO 2480.0101
SER 2490.0151
SER 2500.0297
SER 2510.0286
SER 2520.0246
TYR 2530.0182
SER 2540.0152
TYR 2550.0091
ARG 2560.0052
ARG 2570.0016
LYS 2580.0083
LEU 2590.0124
THR 2600.0182
ASN 2610.0236
PRO 2620.0275
ALA 2630.0333
ASN 2640.0306
LYS 2650.0300
GLU 2660.0239
GLU 2670.0209
SER 2680.0149
ILE 2690.0106
LYS 2700.0066
LYS 2710.0025
GLN 2720.0077
LYS 2730.0142
TYR 2740.0219
SER 2750.0286
TYR 2760.0277
PRO 2770.0165
TRP 2780.0170
GLN 2790.0505
THR 2800.0633
SER 2810.0551
LYS 2820.0503
CYS 2830.0349
PHE 2840.1069
ASP 2880.0129
TYR 2890.0158
GLN 2900.0206
TYR 2910.0316
CYS 2970.0135
ASN 2980.0128
PRO 2990.0095
GLY 3000.0092
LYS 3010.0079
LYS 3020.0054
ASN 3030.0050
THR 3040.0067
ILE 3050.0063
SER 3060.0058
GLY 3070.0053
TYR 3080.0065
LYS 3090.0069
ARG 3100.0059
MET 3110.0063
MET 3120.0070
ALA 3130.0068
THR 3140.0067
LYS 3150.0069
ASP 3160.0069
SER 3170.0071
PHE 3180.0066
GLN 3190.0063
SER 3200.0055
PHE 3210.0055
ASN 3220.0044
LEU 3230.0045
THR 3240.0046
GLU 3250.0050
PRO 3260.0050
HIS 3270.0055
ILE 3280.0052
THR 3290.0057
THR 3300.0056
ASN 3310.0057
LYS 3320.0064
LEU 3330.0058
GLU 3340.0064
TRP 3350.0059
ILE 3360.0063
ASP 3370.0064
PRO 3380.0053
ASP 3390.0059
GLY 3400.0074
ASN 3410.0082
THR 3420.0095
ARG 3430.0131
GLY 3440.0169
GLY 3450.0205
GLY 3460.0241
GLY 10.0034
SER 20.0033
HIS 30.0031
SER 40.0028
MET 50.0027
ARG 60.0023
TYR 70.0022
PHE 80.0019
PHE 90.0018
THR 100.0015
SER 110.0014
VAL 120.0011
SER 130.0011
ARG 140.0011
PRO 150.0010
GLY 160.0013
ARG 170.0014
GLY 180.0015
GLU 190.0015
PRO 200.0014
ARG 210.0017
PHE 220.0019
ILE 230.0019
ALA 240.0021
VAL 250.0022
GLY 260.0025
TYR 270.0024
VAL 280.0027
ASP 290.0024
ASP 300.0021
THR 310.0023
GLN 320.0024
PHE 330.0028
VAL 340.0029
ARG 350.0027
PHE 360.0026
ASP 370.0024
SER 380.0024
ASP 390.0025
ALA 400.0028
ALA 410.0033
SER 420.0035
GLN 430.0033
ARG 440.0034
MET 450.0032
GLU 460.0033
PRO 470.0033
ARG 480.0029
ALA 490.0030
PRO 500.0035
TRP 510.0036
ILE 520.0036
GLU 530.0038
GLN 540.0042
GLU 550.0042
GLY 560.0046
PRO 570.0046
GLU 580.0046
TYR 590.0042
TRP 600.0040
ASP 610.0041
GLY 620.0039
GLU 630.0035
THR 640.0034
ARG 650.0035
LYS 660.0032
VAL 670.0028
LYS 680.0028
ALA 690.0028
HIS 700.0024
SER 710.0022
GLN 720.0023
THR 730.0022
HIS 740.0017
ARG 750.0016
VAL 760.0017
ASP 770.0017
LEU 780.0012
GLY 790.0014
THR 800.0018
LEU 810.0017
ARG 820.0019
GLY 830.0022
TYR 840.0020
TYR 850.0018
ASN 860.0032
GLN 870.0027
SER 880.0032
GLU 890.0031
ALA 900.0026
GLY 910.0008
SER 920.0007
HIS 930.0008
THR 940.0009
VAL 950.0012
GLN 960.0012
ARG 970.0016
MET 980.0018
TYR 990.0022
GLY 1000.0025
CYS 1010.0028
ASP 1020.0030
VAL 1030.0033
GLY 1040.0036
SER 1050.0038
ASP 1060.0041
TRP 1070.0038
ARG 1080.0038
PHE 1090.0035
LEU 1100.0034
ARG 1110.0030
GLY 1120.0027
TYR 1130.0023
HIS 1140.0020
GLN 1150.0017
TYR 1160.0014
ALA 1170.0011
TYR 1180.0010
ASP 1190.0007
GLY 1200.0007
LYS 1210.0008
ASP 1220.0011
TYR 1230.0012
ILE 1240.0015
ALA 1250.0016
LEU 1260.0020
LYS 1270.0022
GLU 1280.0024
ASP 1290.0026
LEU 1300.0025
ARG 1310.0025
SER 1320.0022
TRP 1330.0019
THR 1340.0017
ALA 1350.0015
ALA 1360.0012
ASP 1370.0012
MET 1380.0012
ALA 1390.0012
ALA 1400.0012
GLN 1410.0015
THR 1420.0014
THR 1430.0014
LYS 1440.0016
HIS 1450.0017
LYS 1460.0015
TRP 1470.0017
GLU 1480.0019
ALA 1490.0019
ALA 1500.0018
HIS 1510.0021
VAL 1520.0020
ALA 1530.0023
GLU 1540.0026
GLN 1550.0025
LEU 1560.0024
ARG 1570.0028
ALA 1580.0029
TYR 1590.0028
LEU 1600.0029
GLU 1610.0033
GLY 1620.0035
THR 1630.0033
CYS 1640.0031
VAL 1650.0035
GLU 1660.0038
TRP 1670.0036
LEU 1680.0034
ARG 1690.0037
ARG 1700.0039
TYR 1710.0036
LEU 1720.0036
GLU 1730.0040
ASN 1740.0039
GLY 1750.0036
LYS 1760.0037
GLU 1770.0035
THR 1780.0031
LEU 1790.0031
GLN 1800.0033
ARG 1810.0033
THR 1820.0029
ASP 1830.0023
ALA 1840.0021
PRO 1850.0016
LYS 1860.0016
THR 1870.0017
HIS 1880.0017
MET 1890.0021
THR 1900.0022
HIS 1910.0031
HIS 1920.0035
ALA 1930.0045
VAL 1940.0048
SER 1950.0057
ASP 1960.0064
HIS 1970.0063
GLU 1980.0054
ALA 1990.0045
THR 2000.0036
LEU 2010.0031
ARG 2020.0024
CYS 2030.0021
TRP 2040.0014
ALA 2050.0012
LEU 2060.0011
SER 2070.0015
PHE 2080.0018
TYR 2090.0021
PRO 2100.0022
ALA 2110.0017
GLU 2120.0019
ILE 2130.0018
THR 2140.0020
LEU 2150.0020
THR 2160.0026
TRP 2170.0031
GLN 2180.0039
ARG 2190.0046
ASP 2200.0052
GLY 2210.0048
GLU 2220.0045
ASP 2230.0037
GLN 2240.0036
THR 2250.0031
GLN 2260.0032
ASP 2270.0035
THR 2280.0029
GLU 2290.0025
LEU 2300.0017
VAL 2310.0011
GLU 2320.0008
THR 2330.0008
ARG 2340.0009
PRO 2350.0014
ALA 2360.0016
GLY 2370.0022
ASP 2380.0025
GLY 2390.0024
THR 2400.0018
PHE 2410.0013
GLN 2420.0009
LYS 2430.0010
TRP 2440.0014
ALA 2450.0019
ALA 2460.0027
VAL 2470.0034
VAL 2480.0042
VAL 2490.0047
PRO 2500.0055
SER 2510.0057
GLY 2520.0060
GLN 2530.0055
GLU 2540.0048
GLN 2550.0051
ARG 2560.0050
TYR 2570.0042
THR 2580.0038
CYS 2590.0030
HIS 2600.0029
VAL 2610.0022
GLN 2620.0026
HIS 2630.0025
GLU 2640.0029
GLY 2650.0028
LEU 2660.0031
PRO 2670.0037
LYS 2680.0038
PRO 2690.0034
LEU 2700.0030
THR 2710.0036
LEU 2720.0033
ARG 2730.0039
TRP 2740.0037
GLU 2750.0044
PRO 2760.0046
GLN 2780.0007
ARG 2790.0006
THR 2800.0010
PRO 2810.0010
LYS 2820.0011
ILE 2830.0015
GLN 2840.0015
VAL 2850.0019
TYR 2860.0018
SER 2870.0021
ARG 2880.0020
HIS 2890.0021
PRO 2900.0019
ALA 2910.0024
GLU 2920.0029
ASN 2930.0035
GLY 2940.0040
LYS 2950.0037
SER 2960.0037
ASN 2970.0031
PHE 2980.0029
LEU 2990.0027
ASN 3000.0022
CYS 3010.0019
TYR 3020.0014
VAL 3030.0012
SER 3040.0007
GLY 3050.0003
PHE 3060.0005
HIS 3070.0004
PRO 3080.0004
SER 3090.0009
ASP 3100.0011
ILE 3110.0015
GLU 3120.0020
VAL 3130.0023
ASP 3140.0029
LEU 3150.0031
LEU 3160.0036
LYS 3170.0040
ASN 3180.0044
GLY 3190.0042
GLU 3200.0044
ARG 3210.0040
ILE 3220.0040
GLU 3230.0041
LYS 3240.0039
VAL 3250.0033
GLU 3260.0030
HIS 3270.0024
SER 3280.0020
ASP 3290.0020
LEU 3300.0016
SER 3310.0014
PHE 3320.0011
SER 3330.0008
LYS 3340.0008
ASP 3350.0007
TRP 3360.0008
SER 3370.0006
PHE 3380.0007
TYR 3390.0010
LEU 3400.0014
LEU 3410.0018
TYR 3420.0022
TYR 3430.0026
THR 3440.0032
GLU 3450.0035
PHE 3460.0037
THR 3470.0038
PRO 3480.0035
THR 3490.0040
GLU 3500.0039
LYS 3510.0044
ASP 3520.0042
GLU 3530.0038
TYR 3540.0034
ALA 3550.0030
CYS 3560.0027
ARG 3570.0028
VAL 3580.0022
ASN 3590.0019
HIS 3600.0014
VAL 3610.0011
THR 3620.0013
LEU 3630.0018
SER 3640.0024
GLN 3650.0025
PRO 3660.0025
LYS 3670.0026
ILE 3680.0029
VAL 3690.0026
LYS 3700.0029
TRP 3710.0026
ASP 3720.0024
ARG 3730.0021
ASP 3740.0019
MET 3750.0018
SER 10.0011
GLN 20.0008
PHE 30.0006
ARG 40.0007
VAL 50.0008
SER 60.0011
PRO 70.0015
LEU 80.0017
ASP 90.0023
ARG 100.0025
THR 110.0027
TRP 120.0028
ASN 130.0031
LEU 140.0029
GLY 150.0029
GLU 160.0030
THR 170.0028
VAL 180.0022
GLU 190.0022
LEU 200.0016
LYS 210.0014
CYS 220.0009
GLN 230.0008
VAL 240.0008
LEU 250.0007
LEU 260.0008
SER 270.0007
ASN 280.0012
PRO 290.0015
THR 300.0021
SER 310.0024
GLY 320.0022
CYS 330.0017
SER 340.0018
TRP 350.0014
LEU 360.0013
PHE 370.0009
GLN 380.0010
PRO 390.0010
ARG 400.0016
GLY 410.0017
ALA 420.0025
ALA 430.0027
ALA 440.0019
SER 450.0022
PRO 460.0019
THR 470.0019
PHE 480.0022
LEU 490.0022
LEU 500.0025
TYR 510.0027
LEU 520.0026
SER 530.0027
GLN 540.0030
ASN 550.0036
LYS 560.0041
PRO 570.0035
LYS 580.0036
ALA 590.0033
ALA 600.0032
GLU 610.0038
GLY 620.0034
LEU 630.0028
ASP 640.0029
THR 650.0034
GLN 660.0036
ARG 670.0028
PHE 680.0024
SER 690.0029
GLY 700.0027
LYS 710.0027
ARG 720.0025
LEU 730.0025
GLY 740.0022
ASP 750.0015
THR 760.0016
PHE 770.0017
VAL 780.0020
LEU 790.0019
THR 800.0023
LEU 810.0022
SER 820.0027
ASP 830.0025
PHE 840.0020
ARG 850.0016
ARG 860.0020
GLU 870.0014
ASN 880.0010
GLU 890.0014
GLY 900.0013
TYR 910.0009
TYR 920.0007
PHE 930.0007
CYS 940.0009
SER 950.0014
ALA 960.0016
LEU 970.0020
SER 980.0019
ASN 990.0025
SER 1000.0031
ILE 1010.0026
MET 1020.0022
TYR 1030.0015
PHE 1040.0012
SER 1050.0009
HIS 1060.0009
PHE 1070.0009
VAL 1080.0010
PRO 1090.0014
VAL 1100.0014
PHE 1110.0021
LEU 1120.0027
PRO 1130.0035
ALA 1140.0039
SER 10.0044
GLN 20.0050
PHE 30.0052
ARG 40.0057
VAL 50.0055
SER 60.0062
PRO 70.0064
LEU 80.0058
ASP 90.0063
ARG 100.0066
THR 110.0066
TRP 120.0072
ASN 130.0078
LEU 140.0081
GLY 150.0085
GLU 160.0083
THR 170.0079
VAL 180.0070
GLU 190.0070
LEU 200.0063
LYS 210.0063
CYS 220.0058
GLN 230.0062
VAL 240.0058
LEU 250.0061
LEU 260.0058
SER 270.0063
ASN 280.0062
PRO 290.0060
THR 300.0060
SER 310.0050
GLY 320.0050
CYS 330.0047
SER 340.0040
TRP 350.0042
LEU 360.0035
PHE 370.0035
GLN 380.0030
PRO 390.0035
ARG 400.0035
GLY 410.0028
ALA 420.0022
ALA 430.0020
ALA 440.0022
SER 450.0018
PRO 460.0021
THR 470.0027
PHE 480.0030
LEU 490.0040
LEU 500.0044
TYR 510.0043
LEU 520.0051
SER 530.0053
GLN 540.0058
ASN 550.0055
LYS 560.0056
PRO 570.0052
LYS 580.0043
ALA 590.0043
ALA 600.0036
GLU 610.0033
GLY 620.0043
LEU 630.0048
ASP 640.0060
THR 650.0062
GLN 660.0073
ARG 670.0071
PHE 680.0063
SER 690.0065
GLY 700.0064
LYS 710.0068
ARG 720.0068
LEU 730.0076
GLY 740.0076
ASP 750.0069
THR 760.0067
PHE 770.0062
VAL 780.0065
LEU 790.0061
THR 800.0067
LEU 810.0067
SER 820.0077
ASP 830.0079
PHE 840.0072
ARG 850.0070
ARG 860.0066
GLU 870.0059
ASN 880.0056
GLU 890.0053
GLY 900.0043
TYR 910.0039
TYR 920.0042
PHE 930.0039
CYS 940.0041
SER 950.0037
ALA 960.0041
LEU 970.0040
SER 980.0045
ASN 990.0045
SER 1000.0037
ILE 1010.0036
MET 1020.0031
TYR 1030.0035
PHE 1040.0033
SER 1050.0039
HIS 1060.0037
PHE 1070.0037
VAL 1080.0046
PRO 1090.0046
VAL 1100.0054
PHE 1110.0057
LEU 1120.0066
PRO 1130.0069
ALA 1140.0065

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.