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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0643
MET 10.0643
SER 20.0467
THR 30.0311
ILE 40.0215
THR 50.0171
LYS 60.0288
ASP 70.0327
GLN 80.0212
ILE 90.0150
LEU 100.0276
GLU 110.0305
GLY 120.0221
VAL 130.0155
ALA 140.0257
ALA 150.0281
LEU 160.0177
SER 170.0159
VAL 180.0103
MET 190.0183
GLU 200.0173
ILE 210.0094
VAL 220.0156
GLU 230.0187
LEU 240.0111
ILE 250.0130
SER 260.0186
ALA 270.0142
MET 280.0091
GLU 290.0165
GLU 300.0167
LYS 310.0087
PHE 320.0119
GLY 330.0183
VAL 340.0211
SER 350.0238
ALA 360.0271
ALA 370.0297
ALA 380.0260
VAL 390.0274
ALA 400.0334
ALA 410.0335
GLY 420.0348
PRO 430.0314
ALA 440.0322
ALA 450.0261
ALA 460.0193
VAL 470.0166
GLU 480.0173
ALA 490.0159
ALA 500.0134
GLU 510.0147
GLU 520.0131
GLN 530.0118
THR 540.0124
GLU 550.0114
PHE 560.0091
ASP 570.0084
VAL 580.0077
VAL 590.0064
LEU 600.0064
ALA 610.0044
SER 620.0061
PHE 630.0085
GLY 640.0095
GLU 650.0119
ASN 660.0130
LYS 670.0126
VAL 680.0149
ALA 690.0142
VAL 700.0120
ILE 710.0135
LYS 720.0151
ALA 730.0133
VAL 740.0126
ARG 750.0151
GLY 760.0154
ALA 770.0136
THR 780.0143
GLY 790.0169
LEU 800.0165
GLY 810.0180
LEU 820.0174
LYS 830.0164
GLU 840.0149
ALA 850.0138
LYS 860.0133
ASP 870.0119
LEU 880.0105
VAL 890.0100
GLU 900.0094
SER 910.0076
ALA 920.0063
PRO 930.0050
ALA 940.0069
VAL 950.0079
LEU 960.0096
LYS 970.0106
GLU 980.0108
GLY 990.0118
VAL 1000.0115
ASN 1010.0117
LYS 1020.0097
ASP 1030.0102
GLU 1040.0110
ALA 1050.0091
GLU 1060.0078
THR 1070.0097
LEU 1080.0098
LYS 1090.0075
LYS 1100.0081
SER 1110.0104
LEU 1120.0095
GLU 1130.0080
GLU 1140.0101
ALA 1150.0113
GLY 1160.0098
ALA 1170.0083
SER 1180.0058
VAL 1190.0055
GLU 1200.0042
ILE 1210.0059
LYS 1220.0059
GLU 1230.0074
ALA 1240.0084
ALA 1250.0079
ALA 1260.0078
LYS 1270.0065
ALA 1280.0060
TYR 1290.0055
LYS 1300.0049
ILE 1310.0056
ILE 1320.0035
SER 1330.0030
LEU 1340.0050
LYS 1350.0060
TYR 1360.0106
THR 1370.0132
ARG 1380.0178
LYS 1390.0205
VAL 1400.0246
CYS 1410.0294
ILE 1420.0338
GLY 1430.0381
PRO 1440.0416
GLY 1450.0471
PRO 1460.0469
GLY 1470.0432
LYS 1480.0398
ALA 1490.0330
TYR 1500.0309
LYS 1510.0280
ILE 1520.0226
ILE 1530.0231
SER 1540.0175
LEU 1550.0186
LYS 1560.0138
TYR 1570.0154
THR 1580.0132
ARG 1590.0146
LYS 1600.0144
VAL 1610.0152
CYS 1620.0173
GLY 1630.0172
PRO 1640.0216
GLY 1650.0250
PRO 1660.0275
GLY 1670.0290
GLY 1680.0266
LYS 1690.0264
ALA 1700.0234
TYR 1710.0243
LYS 1720.0227
ILE 1730.0223
ILE 1740.0218
SER 1750.0210
LEU 1760.0223
LYS 1770.0204
TYR 1780.0225
THR 1790.0198
ARG 1800.0225
LYS 1810.0194
VAL 1820.0229
GLY 1830.0208
PRO 1840.0242
GLY 1850.0256
PRO 1860.0287
GLY 1870.0260
ILE 1880.0230
ILE 1890.0221
SER 1900.0169
LEU 1910.0161
LYS 1920.0111
TYR 1930.0115
THR 1940.0071
ARG 1950.0078
LYS 1960.0060
VAL 1970.0055
CYS 1980.0052
ILE 1990.0033
GLN 2000.0038
LEU 2010.0035
GLY 2020.0033
GLY 2030.0034
PRO 2040.0028
GLY 2050.0019
PRO 2060.0014
GLY 2070.0010
ASN 2080.0013
ILE 2090.0020
LYS 2100.0019
THR 2110.0020
ALA 2120.0020
PHE 2130.0023
HIS 2140.0026
CYS 2150.0027
TYR 2160.0032
ALA 2170.0028
ALA 2180.0031
TYR 2190.0039
MET 2200.0040
THR 2210.0038
SER 2220.0044
ILE 2230.0060
LYS 2240.0057
ALA 2250.0074
CYS 2260.0095
ASP 2270.0145
LEU 2280.0124
LYS 2290.0178
LYS 2300.0160
PRO 2310.0104
LEU 2320.0125
MET 2330.0091
GLU 2340.0124
SER 2350.0139
GLY 2360.0070
TRP 2370.0061
SER 2380.0037
ASP 2390.0032
THR 2400.0020
ALA 2410.0050
HIS 2420.0151
GLY 2430.0190
LYS 2440.0351
LYS 2450.0378
SER 2460.0305
LEU 2470.0184
PRO 2480.0152
SER 2490.0060
SER 2500.0077
SER 2510.0099
SER 2520.0088
TYR 2530.0067
SER 2540.0066
TYR 2550.0050
ARG 2560.0041
ARG 2570.0038
LYS 2580.0051
LEU 2590.0065
THR 2600.0085
ASN 2610.0111
PRO 2620.0117
ALA 2630.0158
ASN 2640.0150
LYS 2650.0162
GLU 2660.0134
GLU 2670.0129
SER 2680.0104
ILE 2690.0094
LYS 2700.0086
LYS 2710.0063
GLN 2720.0068
LYS 2730.0050
TYR 2740.0106
SER 2750.0132
TYR 2760.0129
PRO 2770.0113
TRP 2780.0096
GLN 2790.0324
THR 2800.0428
SER 2810.0383
LYS 2820.0385
CYS 2830.0138
PHE 2840.0523
ASP 2880.0108
TYR 2890.0168
GLN 2900.0301
TYR 2910.0465
CYS 2970.0089
ASN 2980.0093
PRO 2990.0067
GLY 3000.0075
LYS 3010.0067
LYS 3020.0043
ASN 3030.0033
THR 3040.0048
ILE 3050.0045
SER 3060.0041
GLY 3070.0038
TYR 3080.0052
LYS 3090.0053
ARG 3100.0040
MET 3110.0046
MET 3120.0053
ALA 3130.0049
THR 3140.0045
LYS 3150.0049
ASP 3160.0046
SER 3170.0045
PHE 3180.0045
GLN 3190.0043
SER 3200.0041
PHE 3210.0041
ASN 3220.0034
LEU 3230.0045
THR 3240.0047
GLU 3250.0062
PRO 3260.0068
HIS 3270.0092
ILE 3280.0103
THR 3290.0124
THR 3300.0139
ASN 3310.0138
LYS 3320.0116
LEU 3330.0097
GLU 3340.0089
TRP 3350.0071
ILE 3360.0060
ASP 3370.0048
PRO 3380.0036
ASP 3390.0031
GLY 3400.0044
ASN 3410.0045
THR 3420.0063
ARG 3430.0081
GLY 3440.0114
GLY 3450.0131
GLY 3460.0160
GLY 10.0051
SER 20.0047
HIS 30.0041
SER 40.0036
MET 50.0030
ARG 60.0026
TYR 70.0021
PHE 80.0018
PHE 90.0017
THR 100.0015
SER 110.0021
VAL 120.0022
SER 130.0028
ARG 140.0030
PRO 150.0037
GLY 160.0035
ARG 170.0032
GLY 180.0030
GLU 190.0028
PRO 200.0025
ARG 210.0017
PHE 220.0015
ILE 230.0010
ALA 240.0012
VAL 250.0013
GLY 260.0018
TYR 270.0022
VAL 280.0029
ASP 290.0031
ASP 300.0026
THR 310.0025
GLN 320.0020
PHE 330.0021
VAL 340.0016
ARG 350.0010
PHE 360.0007
ASP 370.0005
SER 380.0010
ASP 390.0011
ALA 400.0007
ALA 410.0011
SER 420.0007
GLN 430.0005
ARG 440.0006
MET 450.0010
GLU 460.0012
PRO 470.0018
ARG 480.0019
ALA 490.0025
PRO 500.0030
TRP 510.0032
ILE 520.0027
GLU 530.0027
GLN 540.0031
GLU 550.0029
GLY 560.0027
PRO 570.0021
GLU 580.0023
TYR 590.0024
TRP 600.0017
ASP 610.0016
GLY 620.0021
GLU 630.0019
THR 640.0013
ARG 650.0017
LYS 660.0024
VAL 670.0019
LYS 680.0018
ALA 690.0025
HIS 700.0025
SER 710.0023
GLN 720.0029
THR 730.0034
HIS 740.0031
ARG 750.0032
VAL 760.0044
ASP 770.0042
LEU 780.0040
GLY 790.0049
THR 800.0053
LEU 810.0048
ARG 820.0051
GLY 830.0058
TYR 840.0052
TYR 850.0046
ASN 860.0059
GLN 870.0056
SER 880.0066
GLU 890.0072
ALA 900.0067
GLY 910.0042
SER 920.0035
HIS 930.0031
THR 940.0025
VAL 950.0027
GLN 960.0021
ARG 970.0024
MET 980.0024
TYR 990.0029
GLY 1000.0032
CYS 1010.0037
ASP 1020.0042
VAL 1030.0046
GLY 1040.0052
SER 1050.0055
ASP 1060.0057
TRP 1070.0051
ARG 1080.0052
PHE 1090.0049
LEU 1100.0051
ARG 1110.0047
GLY 1120.0041
TYR 1130.0038
HIS 1140.0034
GLN 1150.0032
TYR 1160.0030
ALA 1170.0026
TYR 1180.0028
ASP 1190.0024
GLY 1200.0018
LYS 1210.0020
ASP 1220.0025
TYR 1230.0032
ILE 1240.0037
ALA 1250.0038
LEU 1260.0042
LYS 1270.0046
GLU 1280.0048
ASP 1290.0053
LEU 1300.0049
ARG 1310.0055
SER 1320.0053
TRP 1330.0048
THR 1340.0045
ALA 1350.0045
ALA 1360.0037
ASP 1370.0038
MET 1380.0044
ALA 1390.0046
ALA 1400.0045
GLN 1410.0052
THR 1420.0055
THR 1430.0050
LYS 1440.0053
HIS 1450.0060
LYS 1460.0057
TRP 1470.0052
GLU 1480.0060
ALA 1490.0064
ALA 1500.0058
HIS 1510.0056
VAL 1520.0047
ALA 1530.0049
GLU 1540.0053
GLN 1550.0045
LEU 1560.0041
ARG 1570.0047
ALA 1580.0045
TYR 1590.0037
LEU 1600.0040
GLU 1610.0046
GLY 1620.0042
THR 1630.0035
CYS 1640.0034
VAL 1650.0040
GLU 1660.0040
TRP 1670.0034
LEU 1680.0036
ARG 1690.0041
ARG 1700.0037
TYR 1710.0035
LEU 1720.0040
GLU 1730.0043
ASN 1740.0039
GLY 1750.0038
LYS 1760.0045
GLU 1770.0046
THR 1780.0039
LEU 1790.0039
GLN 1800.0046
ARG 1810.0049
THR 1820.0046
ASP 1830.0043
ALA 1840.0042
PRO 1850.0035
LYS 1860.0038
THR 1870.0034
HIS 1880.0031
MET 1890.0026
THR 1900.0019
HIS 1910.0021
HIS 1920.0019
ALA 1930.0028
VAL 1940.0034
SER 1950.0042
ASP 1960.0046
HIS 1970.0052
GLU 1980.0045
ALA 1990.0035
THR 2000.0028
LEU 2010.0026
ARG 2020.0021
CYS 2030.0026
TRP 2040.0024
ALA 2050.0028
LEU 2060.0029
SER 2070.0034
PHE 2080.0034
TYR 2090.0035
PRO 2100.0034
ALA 2110.0027
GLU 2120.0030
ILE 2130.0030
THR 2140.0031
LEU 2150.0028
THR 2160.0034
TRP 2170.0037
GLN 2180.0046
ARG 2190.0052
ASP 2200.0060
GLY 2210.0056
GLU 2220.0054
ASP 2230.0047
GLN 2240.0044
THR 2250.0041
GLN 2260.0043
ASP 2270.0042
THR 2280.0034
GLU 2290.0027
LEU 2300.0020
VAL 2310.0011
GLU 2320.0011
THR 2330.0015
ARG 2340.0015
PRO 2350.0020
ALA 2360.0025
GLY 2370.0029
ASP 2380.0036
GLY 2390.0034
THR 2400.0031
PHE 2410.0025
GLN 2420.0021
LYS 2430.0018
TRP 2440.0018
ALA 2450.0022
ALA 2460.0025
VAL 2470.0034
VAL 2480.0038
VAL 2490.0045
PRO 2500.0051
SER 2510.0048
GLY 2520.0053
GLN 2530.0053
GLU 2540.0046
GLN 2550.0051
ARG 2560.0053
TYR 2570.0045
THR 2580.0044
CYS 2590.0038
HIS 2600.0040
VAL 2610.0034
GLN 2620.0039
HIS 2630.0040
GLU 2640.0045
GLY 2650.0046
LEU 2660.0049
PRO 2670.0056
LYS 2680.0055
PRO 2690.0049
LEU 2700.0044
THR 2710.0048
LEU 2720.0044
ARG 2730.0047
TRP 2740.0041
GLU 2750.0049
PRO 2760.0056
GLN 2780.0020
ARG 2790.0015
THR 2800.0014
PRO 2810.0010
LYS 2820.0008
ILE 2830.0013
GLN 2840.0014
VAL 2850.0022
TYR 2860.0025
SER 2870.0031
ARG 2880.0033
HIS 2890.0039
PRO 2900.0040
ALA 2910.0044
GLU 2920.0053
ASN 2930.0058
GLY 2940.0065
LYS 2950.0061
SER 2960.0056
ASN 2970.0047
PHE 2980.0039
LEU 2990.0034
ASN 3000.0026
CYS 3010.0021
TYR 3020.0013
VAL 3030.0008
SER 3040.0002
GLY 3050.0006
PHE 3060.0010
HIS 3070.0014
PRO 3080.0019
SER 3090.0012
ASP 3100.0016
ILE 3110.0018
GLU 3120.0024
VAL 3130.0026
ASP 3140.0033
LEU 3150.0035
LEU 3160.0043
LYS 3170.0049
ASN 3180.0054
GLY 3190.0052
GLU 3200.0053
ARG 3210.0047
ILE 3220.0046
GLU 3230.0046
LYS 3240.0041
VAL 3250.0034
GLU 3260.0027
HIS 3270.0018
SER 3280.0012
ASP 3290.0006
LEU 3300.0001
SER 3310.0008
PHE 3320.0011
SER 3330.0013
LYS 3340.0017
ASP 3350.0016
TRP 3360.0015
SER 3370.0010
PHE 3380.0007
TYR 3390.0001
LEU 3400.0007
LEU 3410.0015
TYR 3420.0020
TYR 3430.0028
THR 3440.0037
GLU 3450.0045
PHE 3460.0049
THR 3470.0055
PRO 3480.0052
THR 3490.0058
GLU 3500.0058
LYS 3510.0060
ASP 3520.0056
GLU 3530.0049
TYR 3540.0043
ALA 3550.0037
CYS 3560.0032
ARG 3570.0034
VAL 3580.0028
ASN 3590.0029
HIS 3600.0026
VAL 3610.0031
THR 3620.0031
LEU 3630.0037
SER 3640.0050
GLN 3650.0049
PRO 3660.0043
LYS 3670.0038
ILE 3680.0034
VAL 3690.0029
LYS 3700.0033
TRP 3710.0032
ASP 3720.0030
ARG 3730.0030
ASP 3740.0026
MET 3750.0015
SER 10.0023
GLN 20.0022
PHE 30.0019
ARG 40.0017
VAL 50.0016
SER 60.0012
PRO 70.0013
LEU 80.0020
ASP 90.0024
ARG 100.0023
THR 110.0026
TRP 120.0021
ASN 130.0024
LEU 140.0019
GLY 150.0020
GLU 160.0019
THR 170.0014
VAL 180.0007
GLU 190.0005
LEU 200.0004
LYS 210.0008
CYS 220.0012
GLN 230.0013
VAL 240.0017
LEU 250.0018
LEU 260.0019
SER 270.0015
ASN 280.0019
PRO 290.0024
THR 300.0028
SER 310.0031
GLY 320.0027
CYS 330.0024
SER 340.0028
TRP 350.0025
LEU 360.0027
PHE 370.0026
GLN 380.0032
PRO 390.0030
ARG 400.0035
GLY 410.0043
ALA 420.0056
ALA 430.0060
ALA 440.0049
SER 450.0050
PRO 460.0043
THR 470.0040
PHE 480.0039
LEU 490.0033
LEU 500.0033
TYR 510.0034
LEU 520.0030
SER 530.0030
GLN 540.0031
ASN 550.0037
LYS 560.0044
PRO 570.0039
LYS 580.0044
ALA 590.0043
ALA 600.0046
GLU 610.0055
GLY 620.0047
LEU 630.0037
ASP 640.0030
THR 650.0035
GLN 660.0031
ARG 670.0021
PHE 680.0020
SER 690.0022
GLY 700.0020
LYS 710.0020
ARG 720.0019
LEU 730.0016
GLY 740.0016
ASP 750.0015
THR 760.0011
PHE 770.0014
VAL 780.0011
LEU 790.0012
THR 800.0011
LEU 810.0010
SER 820.0015
ASP 830.0013
PHE 840.0006
ARG 850.0005
ARG 860.0014
GLU 870.0015
ASN 880.0011
GLU 890.0017
GLY 900.0023
TYR 910.0023
TYR 920.0019
PHE 930.0021
CYS 940.0022
SER 950.0029
ALA 960.0028
LEU 970.0031
SER 980.0028
ASN 990.0032
SER 1000.0040
ILE 1010.0039
MET 1020.0036
TYR 1030.0031
PHE 1040.0030
SER 1050.0024
HIS 1060.0025
PHE 1070.0024
VAL 1080.0018
PRO 1090.0021
VAL 1100.0016
PHE 1110.0022
LEU 1120.0028
PRO 1130.0040
ALA 1140.0049
SER 10.0075
GLN 20.0079
PHE 30.0082
ARG 40.0091
VAL 50.0090
SER 60.0100
PRO 70.0105
LEU 80.0100
ASP 90.0109
ARG 100.0111
THR 110.0110
TRP 120.0113
ASN 130.0120
LEU 140.0120
GLY 150.0123
GLU 160.0121
THR 170.0114
VAL 180.0105
GLU 190.0104
LEU 200.0096
LYS 210.0095
CYS 220.0089
GLN 230.0092
VAL 240.0085
LEU 250.0090
LEU 260.0083
SER 270.0088
ASN 280.0083
PRO 290.0081
THR 300.0078
SER 310.0067
GLY 320.0067
CYS 330.0067
SER 340.0061
TRP 350.0066
LEU 360.0059
PHE 370.0062
GLN 380.0057
PRO 390.0064
ARG 400.0065
GLY 410.0052
ALA 420.0040
ALA 430.0034
ALA 440.0042
SER 450.0037
PRO 460.0044
THR 470.0048
PHE 480.0050
LEU 490.0060
LEU 500.0063
TYR 510.0059
LEU 520.0067
SER 530.0066
GLN 540.0069
ASN 550.0063
LYS 560.0066
PRO 570.0065
LYS 580.0055
ALA 590.0057
ALA 600.0051
GLU 610.0044
GLY 620.0057
LEU 630.0066
ASP 640.0080
THR 650.0081
GLN 660.0094
ARG 670.0095
PHE 680.0086
SER 690.0087
GLY 700.0087
LYS 710.0090
ARG 720.0091
LEU 730.0102
GLY 740.0102
ASP 750.0096
THR 760.0096
PHE 770.0089
VAL 780.0093
LEU 790.0088
THR 800.0096
LEU 810.0097
SER 820.0107
ASP 830.0112
PHE 840.0106
ARG 850.0104
ARG 860.0100
GLU 870.0089
ASN 880.0086
GLU 890.0086
GLY 900.0076
TYR 910.0071
TYR 920.0072
PHE 930.0068
CYS 940.0067
SER 950.0059
ALA 960.0061
LEU 970.0057
SER 980.0063
ASN 990.0060
SER 1000.0051
ILE 1010.0052
MET 1020.0050
TYR 1030.0057
PHE 1040.0059
SER 1050.0068
HIS 1060.0071
PHE 1070.0071
VAL 1080.0082
PRO 1090.0084
VAL 1100.0091
PHE 1110.0096
LEU 1120.0108
PRO 1130.0115
ALA 1140.0112

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.