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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0701
MET 10.0052
SER 20.0045
THR 30.0022
ILE 40.0017
THR 50.0027
LYS 60.0033
ASP 70.0043
GLN 80.0029
ILE 90.0011
LEU 100.0029
GLU 110.0030
GLY 120.0014
VAL 130.0010
ALA 140.0024
ALA 150.0022
LEU 160.0011
SER 170.0014
VAL 180.0005
MET 190.0014
GLU 200.0019
ILE 210.0015
VAL 220.0021
GLU 230.0032
LEU 240.0034
ILE 250.0037
SER 260.0036
ALA 270.0055
MET 280.0061
GLU 290.0056
GLU 300.0065
LYS 310.0084
PHE 320.0086
GLY 330.0073
VAL 340.0071
SER 350.0052
ALA 360.0076
ALA 370.0070
ALA 380.0072
VAL 390.0103
ALA 400.0120
ALA 410.0119
GLY 420.0130
PRO 430.0106
ALA 440.0112
ALA 450.0092
ALA 460.0058
VAL 470.0066
GLU 480.0080
ALA 490.0060
ALA 500.0066
GLU 510.0086
GLU 520.0081
GLN 530.0074
THR 540.0081
GLU 550.0073
PHE 560.0063
ASP 570.0053
VAL 580.0053
VAL 590.0044
LEU 600.0045
ALA 610.0044
SER 620.0050
PHE 630.0057
GLY 640.0069
GLU 650.0078
ASN 660.0079
LYS 670.0067
VAL 680.0072
ALA 690.0080
VAL 700.0069
ILE 710.0063
LYS 720.0075
ALA 730.0077
VAL 740.0066
ARG 750.0070
GLY 760.0081
ALA 770.0077
THR 780.0070
GLY 790.0076
LEU 800.0064
GLY 810.0061
LEU 820.0058
LYS 830.0047
GLU 840.0046
ALA 850.0052
LYS 860.0047
ASP 870.0038
LEU 880.0040
VAL 890.0045
GLU 900.0040
SER 910.0033
ALA 920.0037
PRO 930.0035
ALA 940.0036
VAL 950.0041
LEU 960.0047
LYS 970.0056
GLU 980.0058
GLY 990.0069
VAL 1000.0075
ASN 1010.0085
LYS 1020.0083
ASP 1030.0094
GLU 1040.0087
ALA 1050.0075
GLU 1060.0083
THR 1070.0090
LEU 1080.0078
LYS 1090.0074
LYS 1100.0087
SER 1110.0087
LEU 1120.0075
GLU 1130.0079
GLU 1140.0091
ALA 1150.0083
GLY 1160.0079
ALA 1170.0066
SER 1180.0061
VAL 1190.0057
GLU 1200.0051
ILE 1210.0053
LYS 1220.0045
GLU 1230.0051
ALA 1240.0052
ALA 1250.0046
ALA 1260.0047
LYS 1270.0051
ALA 1280.0048
TYR 1290.0054
LYS 1300.0053
ILE 1310.0048
ILE 1320.0044
SER 1330.0046
LEU 1340.0047
LYS 1350.0058
TYR 1360.0075
THR 1370.0103
ARG 1380.0131
LYS 1390.0173
VAL 1400.0196
CYS 1410.0259
ILE 1420.0278
GLY 1430.0337
PRO 1440.0367
GLY 1450.0424
PRO 1460.0465
GLY 1470.0467
LYS 1480.0420
ALA 1490.0389
TYR 1500.0334
LYS 1510.0283
ILE 1520.0253
ILE 1530.0203
SER 1540.0178
LEU 1550.0133
LYS 1560.0117
TYR 1570.0089
THR 1580.0099
ARG 1590.0097
LYS 1600.0124
VAL 1610.0130
CYS 1620.0153
GLY 1630.0155
PRO 1640.0193
GLY 1650.0218
PRO 1660.0229
GLY 1670.0260
GLY 1680.0235
LYS 1690.0246
ALA 1700.0211
TYR 1710.0209
LYS 1720.0172
ILE 1730.0169
ILE 1740.0139
SER 1750.0148
LEU 1760.0138
LYS 1770.0169
TYR 1780.0177
THR 1790.0219
ARG 1800.0246
LYS 1810.0295
VAL 1820.0331
GLY 1830.0370
PRO 1840.0401
GLY 1850.0383
PRO 1860.0349
GLY 1870.0296
ILE 1880.0252
ILE 1890.0203
SER 1900.0166
LEU 1910.0117
LYS 1920.0100
TYR 1930.0067
THR 1940.0057
ARG 1950.0051
LYS 1960.0059
VAL 1970.0052
CYS 1980.0054
ILE 1990.0052
GLN 2000.0062
LEU 2010.0046
GLY 2020.0039
GLY 2030.0035
PRO 2040.0032
GLY 2050.0031
PRO 2060.0025
GLY 2070.0024
ASN 2080.0026
ILE 2090.0030
LYS 2100.0030
THR 2110.0026
ALA 2120.0028
PHE 2130.0031
HIS 2140.0029
CYS 2150.0028
TYR 2160.0023
ALA 2170.0024
ALA 2180.0023
TYR 2190.0025
MET 2200.0027
THR 2210.0024
SER 2220.0028
ILE 2230.0020
LYS 2240.0024
ALA 2250.0022
CYS 2260.0088
ASP 2270.0173
LEU 2280.0235
LYS 2290.0316
LYS 2300.0380
PRO 2310.0312
LEU 2320.0312
MET 2330.0251
GLU 2340.0262
SER 2350.0242
GLY 2360.0196
TRP 2370.0176
SER 2380.0170
ASP 2390.0174
THR 2400.0194
ALA 2410.0223
HIS 2420.0159
GLY 2430.0164
LYS 2440.0239
LYS 2450.0263
SER 2460.0231
LEU 2470.0132
PRO 2480.0133
SER 2490.0188
SER 2500.0192
SER 2510.0212
SER 2520.0205
TYR 2530.0160
SER 2540.0147
TYR 2550.0110
ARG 2560.0107
ARG 2570.0093
LYS 2580.0100
LEU 2590.0126
THR 2600.0166
ASN 2610.0220
PRO 2620.0288
ALA 2630.0318
ASN 2640.0285
LYS 2650.0248
GLU 2660.0177
GLU 2670.0120
SER 2680.0103
ILE 2690.0105
LYS 2700.0165
LYS 2710.0215
GLN 2720.0222
LYS 2730.0159
TYR 2740.0159
SER 2750.0125
TYR 2760.0156
PRO 2770.0359
TRP 2780.0243
GLN 2790.0476
THR 2800.0688
SER 2810.0613
LYS 2820.0701
CYS 2830.0197
PHE 2840.0548
ASP 2880.0097
TYR 2890.0179
GLN 2900.0428
TYR 2910.0507
CYS 2970.0092
ASN 2980.0078
PRO 2990.0061
GLY 3000.0052
LYS 3010.0054
LYS 3020.0049
ASN 3030.0049
THR 3040.0054
ILE 3050.0054
SER 3060.0052
GLY 3070.0051
TYR 3080.0053
LYS 3090.0055
ARG 3100.0052
MET 3110.0052
MET 3120.0054
ALA 3130.0056
THR 3140.0056
LYS 3150.0055
ASP 3160.0059
SER 3170.0058
PHE 3180.0052
GLN 3190.0050
SER 3200.0045
PHE 3210.0047
ASN 3220.0039
LEU 3230.0031
THR 3240.0034
GLU 3250.0035
PRO 3260.0032
HIS 3270.0053
ILE 3280.0063
THR 3290.0086
THR 3300.0104
ASN 3310.0094
LYS 3320.0062
LEU 3330.0045
GLU 3340.0044
TRP 3350.0036
ILE 3360.0047
ASP 3370.0053
PRO 3380.0051
ASP 3390.0061
GLY 3400.0072
ASN 3410.0075
THR 3420.0080
ARG 3430.0121
GLY 3440.0152
GLY 3450.0190
GLY 3460.0224
GLY 10.0038
SER 20.0036
HIS 30.0031
SER 40.0029
MET 50.0027
ARG 60.0025
TYR 70.0026
PHE 80.0024
PHE 90.0029
THR 100.0029
SER 110.0035
VAL 120.0035
SER 130.0042
ARG 140.0045
PRO 150.0050
GLY 160.0056
ARG 170.0053
GLY 180.0052
GLU 190.0050
PRO 200.0044
ARG 210.0039
PHE 220.0035
ILE 230.0029
ALA 240.0027
VAL 250.0020
GLY 260.0020
TYR 270.0017
VAL 280.0020
ASP 290.0020
ASP 300.0014
THR 310.0010
GLN 320.0010
PHE 330.0014
VAL 340.0019
ARG 350.0023
PHE 360.0030
ASP 370.0033
SER 380.0040
ASP 390.0041
ALA 400.0039
ALA 410.0045
SER 420.0041
GLN 430.0043
ARG 440.0038
MET 450.0032
GLU 460.0026
PRO 470.0019
ARG 480.0013
ALA 490.0008
PRO 500.0007
TRP 510.0011
ILE 520.0016
GLU 530.0015
GLN 540.0016
GLU 550.0023
GLY 560.0029
PRO 570.0035
GLU 580.0040
TYR 590.0035
TRP 600.0034
ASP 610.0042
GLY 620.0043
GLU 630.0038
THR 640.0040
ARG 650.0047
LYS 660.0044
VAL 670.0039
LYS 680.0045
ALA 690.0049
HIS 700.0043
SER 710.0043
GLN 720.0049
THR 730.0049
HIS 740.0044
ARG 750.0047
VAL 760.0052
ASP 770.0047
LEU 780.0045
GLY 790.0051
THR 800.0052
LEU 810.0046
ARG 820.0047
GLY 830.0053
TYR 840.0051
TYR 850.0048
ASN 860.0053
GLN 870.0047
SER 880.0049
GLU 890.0052
ALA 900.0046
GLY 910.0041
SER 920.0038
HIS 930.0036
THR 940.0033
VAL 950.0035
GLN 960.0030
ARG 970.0032
MET 980.0029
TYR 990.0033
GLY 1000.0033
CYS 1010.0036
ASP 1020.0036
VAL 1030.0040
GLY 1040.0043
SER 1050.0044
ASP 1060.0048
TRP 1070.0043
ARG 1080.0048
PHE 1090.0047
LEU 1100.0046
ARG 1110.0043
GLY 1120.0041
TYR 1130.0038
HIS 1140.0038
GLN 1150.0035
TYR 1160.0035
ALA 1170.0033
TYR 1180.0035
ASP 1190.0031
GLY 1200.0026
LYS 1210.0028
ASP 1220.0032
TYR 1230.0038
ILE 1240.0041
ALA 1250.0040
LEU 1260.0044
LYS 1270.0046
GLU 1280.0046
ASP 1290.0052
LEU 1300.0050
ARG 1310.0056
SER 1320.0054
TRP 1330.0050
THR 1340.0046
ALA 1350.0046
ALA 1360.0041
ASP 1370.0042
MET 1380.0047
ALA 1390.0048
ALA 1400.0046
GLN 1410.0053
THR 1420.0056
THR 1430.0052
LYS 1440.0054
HIS 1450.0061
LYS 1460.0060
TRP 1470.0057
GLU 1480.0062
ALA 1490.0066
ALA 1500.0063
HIS 1510.0062
VAL 1520.0056
ALA 1530.0054
GLU 1540.0058
GLN 1550.0054
LEU 1560.0049
ARG 1570.0052
ALA 1580.0053
TYR 1590.0047
LEU 1600.0044
GLU 1610.0049
GLY 1620.0049
THR 1630.0045
CYS 1640.0039
VAL 1650.0040
GLU 1660.0042
TRP 1670.0035
LEU 1680.0032
ARG 1690.0034
ARG 1700.0031
TYR 1710.0025
LEU 1720.0026
GLU 1730.0028
ASN 1740.0022
GLY 1750.0017
LYS 1760.0023
GLU 1770.0021
THR 1780.0016
LEU 1790.0020
GLN 1800.0027
ARG 1810.0028
THR 1820.0030
ASP 1830.0030
ALA 1840.0035
PRO 1850.0033
LYS 1860.0038
THR 1870.0039
HIS 1880.0043
MET 1890.0043
THR 1900.0043
HIS 1910.0046
HIS 1920.0044
ALA 1930.0045
VAL 1940.0038
SER 1950.0042
ASP 1960.0049
HIS 1970.0045
GLU 1980.0039
ALA 1990.0040
THR 2000.0035
LEU 2010.0038
ARG 2020.0034
CYS 2030.0034
TRP 2040.0032
ALA 2050.0030
LEU 2060.0029
SER 2070.0027
PHE 2080.0025
TYR 2090.0022
PRO 2100.0022
ALA 2110.0018
GLU 2120.0022
ILE 2130.0026
THR 2140.0028
LEU 2150.0028
THR 2160.0031
TRP 2170.0034
GLN 2180.0040
ARG 2190.0043
ASP 2200.0050
GLY 2210.0047
GLU 2220.0041
ASP 2230.0035
GLN 2240.0028
THR 2250.0024
GLN 2260.0020
ASP 2270.0020
THR 2280.0021
GLU 2290.0016
LEU 2300.0016
VAL 2310.0015
GLU 2320.0010
THR 2330.0013
ARG 2340.0012
PRO 2350.0011
ALA 2360.0017
GLY 2370.0014
ASP 2380.0015
GLY 2390.0013
THR 2400.0018
PHE 2410.0017
GLN 2420.0020
LYS 2430.0021
TRP 2440.0024
ALA 2450.0025
ALA 2460.0026
VAL 2470.0028
VAL 2480.0030
VAL 2490.0037
PRO 2500.0040
SER 2510.0048
GLY 2520.0054
GLN 2530.0050
GLU 2540.0049
GLN 2550.0055
ARG 2560.0051
TYR 2570.0045
THR 2580.0046
CYS 2590.0040
HIS 2600.0040
VAL 2610.0037
GLN 2620.0036
HIS 2630.0034
GLU 2640.0036
GLY 2650.0037
LEU 2660.0043
PRO 2670.0050
LYS 2680.0052
PRO 2690.0047
LEU 2700.0047
THR 2710.0050
LEU 2720.0050
ARG 2730.0054
TRP 2740.0052
GLU 2750.0061
PRO 2760.0066
GLN 2780.0014
ARG 2790.0011
THR 2800.0012
PRO 2810.0011
LYS 2820.0011
ILE 2830.0018
GLN 2840.0020
VAL 2850.0026
TYR 2860.0027
SER 2870.0028
ARG 2880.0025
HIS 2890.0031
PRO 2900.0037
ALA 2910.0041
GLU 2920.0046
ASN 2930.0050
GLY 2940.0050
LYS 2950.0044
SER 2960.0038
ASN 2970.0033
PHE 2980.0028
LEU 2990.0029
ASN 3000.0023
CYS 3010.0021
TYR 3020.0014
VAL 3030.0012
SER 3040.0007
GLY 3050.0006
PHE 3060.0011
HIS 3070.0017
PRO 3080.0023
SER 3090.0021
ASP 3100.0027
ILE 3110.0025
GLU 3120.0029
VAL 3130.0028
ASP 3140.0033
LEU 3150.0034
LEU 3160.0041
LYS 3170.0046
ASN 3180.0052
GLY 3190.0050
GLU 3200.0050
ARG 3210.0045
ILE 3220.0042
GLU 3230.0042
LYS 3240.0037
VAL 3250.0031
GLU 3260.0025
HIS 3270.0019
SER 3280.0014
ASP 3290.0016
LEU 3300.0017
SER 3310.0015
PHE 3320.0014
SER 3330.0014
LYS 3340.0019
ASP 3350.0018
TRP 3360.0019
SER 3370.0013
PHE 3380.0012
TYR 3390.0009
LEU 3400.0012
LEU 3410.0013
TYR 3420.0020
TYR 3430.0023
THR 3440.0028
GLU 3450.0031
PHE 3460.0037
THR 3470.0042
PRO 3480.0045
THR 3490.0052
GLU 3500.0056
LYS 3510.0059
ASP 3520.0053
GLU 3530.0048
TYR 3540.0041
ALA 3550.0037
CYS 3560.0032
ARG 3570.0033
VAL 3580.0027
ASN 3590.0029
HIS 3600.0025
VAL 3610.0027
THR 3620.0021
LEU 3630.0024
SER 3640.0028
GLN 3650.0032
PRO 3660.0032
LYS 3670.0029
ILE 3680.0034
VAL 3690.0032
LYS 3700.0037
TRP 3710.0036
ASP 3720.0039
ARG 3730.0039
ASP 3740.0042
MET 3750.0037
SER 10.0019
GLN 20.0019
PHE 30.0022
ARG 40.0026
VAL 50.0029
SER 60.0030
PRO 70.0030
LEU 80.0030
ASP 90.0030
ARG 100.0031
THR 110.0031
TRP 120.0032
ASN 130.0033
LEU 140.0034
GLY 150.0034
GLU 160.0034
THR 170.0033
VAL 180.0032
GLU 190.0032
LEU 200.0032
LYS 210.0031
CYS 220.0027
GLN 230.0025
VAL 240.0022
LEU 250.0019
LEU 260.0014
SER 270.0012
ASN 280.0013
PRO 290.0017
THR 300.0019
SER 310.0020
GLY 320.0023
CYS 330.0024
SER 340.0027
TRP 350.0030
LEU 360.0029
PHE 370.0031
GLN 380.0033
PRO 390.0036
ARG 400.0037
GLY 410.0045
ALA 420.0045
ALA 430.0042
ALA 440.0040
SER 450.0036
PRO 460.0032
THR 470.0033
PHE 480.0032
LEU 490.0033
LEU 500.0032
TYR 510.0030
LEU 520.0031
SER 530.0030
GLN 540.0032
ASN 550.0035
LYS 560.0036
PRO 570.0035
LYS 580.0034
ALA 590.0036
ALA 600.0035
GLU 610.0036
GLY 620.0036
LEU 630.0035
ASP 640.0034
THR 650.0034
GLN 660.0034
ARG 670.0034
PHE 680.0032
SER 690.0032
GLY 700.0032
LYS 710.0033
ARG 720.0030
LEU 730.0030
GLY 740.0027
ASP 750.0025
THR 760.0027
PHE 770.0028
VAL 780.0031
LEU 790.0031
THR 800.0034
LEU 810.0031
SER 820.0034
ASP 830.0036
PHE 840.0035
ARG 850.0035
ARG 860.0036
GLU 870.0035
ASN 880.0033
GLU 890.0033
GLY 900.0032
TYR 910.0031
TYR 920.0030
PHE 930.0027
CYS 940.0025
SER 950.0023
ALA 960.0021
LEU 970.0017
SER 980.0012
ASN 990.0010
SER 1000.0012
ILE 1010.0011
MET 1020.0015
TYR 1030.0017
PHE 1040.0021
SER 1050.0023
HIS 1060.0026
PHE 1070.0028
VAL 1080.0028
PRO 1090.0030
VAL 1100.0032
PHE 1110.0030
LEU 1120.0030
PRO 1130.0028
ALA 1140.0029
SER 10.0043
GLN 20.0039
PHE 30.0036
ARG 40.0037
VAL 50.0035
SER 60.0036
PRO 70.0038
LEU 80.0044
ASP 90.0048
ARG 100.0046
THR 110.0047
TRP 120.0044
ASN 130.0048
LEU 140.0047
GLY 150.0043
GLU 160.0040
THR 170.0033
VAL 180.0032
GLU 190.0028
LEU 200.0028
LYS 210.0026
CYS 220.0028
GLN 230.0029
VAL 240.0030
LEU 250.0036
LEU 260.0037
SER 270.0041
ASN 280.0037
PRO 290.0031
THR 300.0026
SER 310.0024
GLY 320.0019
CYS 330.0019
SER 340.0017
TRP 350.0020
LEU 360.0023
PHE 370.0027
GLN 380.0031
PRO 390.0035
ARG 400.0041
GLY 410.0038
ALA 420.0035
ALA 430.0030
ALA 440.0031
SER 450.0027
PRO 460.0026
THR 470.0022
PHE 480.0017
LEU 490.0016
LEU 500.0012
TYR 510.0011
LEU 520.0011
SER 530.0015
GLN 540.0018
ASN 550.0015
LYS 560.0010
PRO 570.0006
LYS 580.0006
ALA 590.0009
ALA 600.0011
GLU 610.0010
GLY 620.0017
LEU 630.0018
ASP 640.0023
THR 650.0019
GLN 660.0024
ARG 670.0025
PHE 680.0020
SER 690.0015
GLY 700.0012
LYS 710.0011
ARG 720.0013
LEU 730.0016
GLY 740.0021
ASP 750.0025
THR 760.0024
PHE 770.0019
VAL 780.0019
LEU 790.0020
THR 800.0022
LEU 810.0026
SER 820.0030
ASP 830.0036
PHE 840.0038
ARG 850.0041
ARG 860.0044
GLU 870.0039
ASN 880.0035
GLU 890.0040
GLY 900.0038
TYR 910.0036
TYR 920.0031
PHE 930.0029
CYS 940.0026
SER 950.0025
ALA 960.0025
LEU 970.0026
SER 980.0031
ASN 990.0033
SER 1000.0031
ILE 1010.0032
MET 1020.0029
TYR 1030.0031
PHE 1040.0031
SER 1050.0033
HIS 1060.0039
PHE 1070.0038
VAL 1080.0037
PRO 1090.0041
VAL 1100.0039
PHE 1110.0045
LEU 1120.0050
PRO 1130.0056
ALA 1140.0061

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.