CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1200
MET 10.1200
SER 20.0844
THR 30.0506
ILE 40.0296
THR 50.0311
LYS 60.0591
ASP 70.0696
GLN 80.0421
ILE 90.0267
LEU 100.0601
GLU 110.0627
GLY 120.0398
VAL 130.0319
ALA 140.0547
ALA 150.0515
LEU 160.0255
SER 170.0177
VAL 180.0128
MET 190.0203
GLU 200.0167
ILE 210.0139
VAL 220.0221
GLU 230.0213
LEU 240.0145
ILE 250.0250
SER 260.0251
ALA 270.0203
MET 280.0225
GLU 290.0280
GLU 300.0252
LYS 310.0245
PHE 320.0291
GLY 330.0314
VAL 340.0328
SER 350.0320
ALA 360.0356
ALA 370.0347
ALA 380.0300
VAL 390.0343
ALA 400.0435
ALA 410.0445
GLY 420.0512
PRO 430.0504
ALA 440.0519
ALA 450.0369
ALA 460.0294
VAL 470.0304
GLU 480.0220
ALA 490.0089
ALA 500.0099
GLU 510.0075
GLU 520.0070
GLN 530.0054
THR 540.0057
GLU 550.0043
PHE 560.0045
ASP 570.0041
VAL 580.0042
VAL 590.0037
LEU 600.0038
ALA 610.0035
SER 620.0038
PHE 630.0043
GLY 640.0046
GLU 650.0051
ASN 660.0054
LYS 670.0050
VAL 680.0055
ALA 690.0058
VAL 700.0052
ILE 710.0050
LYS 720.0056
ALA 730.0056
VAL 740.0050
ARG 750.0052
GLY 760.0057
ALA 770.0054
THR 780.0050
GLY 790.0053
LEU 800.0047
GLY 810.0048
LEU 820.0050
LYS 830.0044
GLU 840.0041
ALA 850.0044
LYS 860.0043
ASP 870.0037
LEU 880.0037
VAL 890.0039
GLU 900.0036
SER 910.0030
ALA 920.0031
PRO 930.0029
ALA 940.0032
VAL 950.0035
LEU 960.0038
LYS 970.0040
GLU 980.0039
GLY 990.0044
VAL 1000.0049
ASN 1010.0055
LYS 1020.0057
ASP 1030.0062
GLU 1040.0057
ALA 1050.0053
GLU 1060.0057
THR 1070.0060
LEU 1080.0054
LYS 1090.0053
LYS 1100.0059
SER 1110.0059
LEU 1120.0053
GLU 1130.0054
GLU 1140.0060
ALA 1150.0057
GLY 1160.0053
ALA 1170.0047
SER 1180.0043
VAL 1190.0043
GLU 1200.0040
ILE 1210.0042
LYS 1220.0038
GLU 1230.0041
ALA 1240.0041
ALA 1250.0038
ALA 1260.0046
LYS 1270.0041
ALA 1280.0040
TYR 1290.0041
LYS 1300.0039
ILE 1310.0053
ILE 1320.0036
SER 1330.0032
LEU 1340.0030
LYS 1350.0033
TYR 1360.0060
THR 1370.0077
ARG 1380.0110
LYS 1390.0129
VAL 1400.0158
CYS 1410.0197
ILE 1420.0229
GLY 1430.0266
PRO 1440.0290
GLY 1450.0335
PRO 1460.0335
GLY 1470.0297
LYS 1480.0261
ALA 1490.0202
TYR 1500.0188
LYS 1510.0166
ILE 1520.0128
ILE 1530.0138
SER 1540.0100
LEU 1550.0119
LYS 1560.0094
TYR 1570.0108
THR 1580.0101
ARG 1590.0112
LYS 1600.0118
VAL 1610.0123
CYS 1620.0138
GLY 1630.0131
PRO 1640.0160
GLY 1650.0188
PRO 1660.0193
GLY 1670.0201
GLY 1680.0185
LYS 1690.0195
ALA 1700.0180
TYR 1710.0190
LYS 1720.0177
ILE 1730.0177
ILE 1740.0171
SER 1750.0168
LEU 1760.0169
LYS 1770.0152
TYR 1780.0156
THR 1790.0128
ARG 1800.0137
LYS 1810.0101
VAL 1820.0119
GLY 1830.0100
PRO 1840.0135
GLY 1850.0161
PRO 1860.0188
GLY 1870.0161
ILE 1880.0143
ILE 1890.0133
SER 1900.0096
LEU 1910.0093
LYS 1920.0060
TYR 1930.0068
THR 1940.0045
ARG 1950.0054
LYS 1960.0052
VAL 1970.0045
CYS 1980.0044
ILE 1990.0031
GLN 2000.0032
LEU 2010.0031
GLY 2020.0028
GLY 2030.0027
PRO 2040.0022
GLY 2050.0017
PRO 2060.0012
GLY 2070.0010
ASN 2080.0013
ILE 2090.0017
LYS 2100.0014
THR 2110.0010
ALA 2120.0012
PHE 2130.0014
HIS 2140.0012
CYS 2150.0010
TYR 2160.0009
ALA 2170.0007
ALA 2180.0008
TYR 2190.0012
MET 2200.0013
THR 2210.0011
SER 2220.0016
ILE 2230.0026
LYS 2240.0025
ALA 2250.0036
CYS 2260.0056
ASP 2270.0077
LEU 2280.0071
LYS 2290.0085
LYS 2300.0073
PRO 2310.0048
LEU 2320.0034
MET 2330.0026
GLU 2340.0035
SER 2350.0051
GLY 2360.0034
TRP 2370.0028
SER 2380.0027
ASP 2390.0024
THR 2400.0026
ALA 2410.0039
HIS 2420.0020
GLY 2430.0032
LYS 2440.0074
LYS 2450.0093
SER 2460.0090
LEU 2470.0065
PRO 2480.0070
SER 2490.0064
SER 2500.0035
SER 2510.0018
SER 2520.0016
TYR 2530.0015
SER 2540.0012
TYR 2550.0012
ARG 2560.0010
ARG 2570.0011
LYS 2580.0011
LEU 2590.0015
THR 2600.0016
ASN 2610.0021
PRO 2620.0026
ALA 2630.0022
ASN 2640.0016
LYS 2650.0011
GLU 2660.0009
GLU 2670.0011
SER 2680.0012
ILE 2690.0016
LYS 2700.0019
LYS 2710.0017
GLN 2720.0017
LYS 2730.0016
TYR 2740.0014
SER 2750.0014
TYR 2760.0007
PRO 2770.0004
TRP 2780.0010
GLN 2790.0018
THR 2800.0022
SER 2810.0023
LYS 2820.0074
CYS 2830.0108
PHE 2840.0169
ASP 2880.0090
TYR 2890.0206
GLN 2900.0488
TYR 2910.0603
CYS 2970.0042
ASN 2980.0037
PRO 2990.0024
GLY 3000.0023
LYS 3010.0019
LYS 3020.0006
ASN 3030.0007
THR 3040.0010
ILE 3050.0014
SER 3060.0015
GLY 3070.0018
TYR 3080.0021
LYS 3090.0021
ARG 3100.0020
MET 3110.0022
MET 3120.0023
ALA 3130.0023
THR 3140.0022
LYS 3150.0022
ASP 3160.0022
SER 3170.0023
PHE 3180.0022
GLN 3190.0020
SER 3200.0018
PHE 3210.0017
ASN 3220.0011
LEU 3230.0018
THR 3240.0020
GLU 3250.0030
PRO 3260.0033
HIS 3270.0050
ILE 3280.0057
THR 3290.0071
THR 3300.0081
ASN 3310.0081
LYS 3320.0066
LEU 3330.0053
GLU 3340.0047
TRP 3350.0035
ILE 3360.0026
ASP 3370.0018
PRO 3380.0010
ASP 3390.0006
GLY 3400.0013
ASN 3410.0018
THR 3420.0028
ARG 3430.0039
GLY 3440.0060
GLY 3450.0073
GLY 3460.0090
GLY 10.0037
SER 20.0035
HIS 30.0031
SER 40.0028
MET 50.0024
ARG 60.0021
TYR 70.0017
PHE 80.0014
PHE 90.0013
THR 100.0012
SER 110.0016
VAL 120.0017
SER 130.0023
ARG 140.0026
PRO 150.0031
GLY 160.0036
ARG 170.0032
GLY 180.0029
GLU 190.0027
PRO 200.0023
ARG 210.0015
PHE 220.0013
ILE 230.0008
ALA 240.0010
VAL 250.0011
GLY 260.0015
TYR 270.0018
VAL 280.0023
ASP 290.0023
ASP 300.0019
THR 310.0020
GLN 320.0016
PHE 330.0018
VAL 340.0014
ARG 350.0009
PHE 360.0007
ASP 370.0006
SER 380.0010
ASP 390.0010
ALA 400.0006
ALA 410.0007
SER 420.0003
GLN 430.0007
ARG 440.0008
MET 450.0011
GLU 460.0011
PRO 470.0015
ARG 480.0016
ALA 490.0021
PRO 500.0025
TRP 510.0027
ILE 520.0024
GLU 530.0023
GLN 540.0027
GLU 550.0026
GLY 560.0026
PRO 570.0022
GLU 580.0025
TYR 590.0024
TRP 600.0018
ASP 610.0019
GLY 620.0023
GLU 630.0020
THR 640.0015
ARG 650.0020
LYS 660.0023
VAL 670.0018
LYS 680.0018
ALA 690.0024
HIS 700.0022
SER 710.0020
GLN 720.0027
THR 730.0029
HIS 740.0023
ARG 750.0027
VAL 760.0033
ASP 770.0031
LEU 780.0029
GLY 790.0035
THR 800.0037
LEU 810.0033
ARG 820.0035
GLY 830.0040
TYR 840.0037
TYR 850.0035
ASN 860.0042
GLN 870.0038
SER 880.0041
GLU 890.0041
ALA 900.0038
GLY 910.0029
SER 920.0025
HIS 930.0022
THR 940.0018
VAL 950.0019
GLN 960.0015
ARG 970.0018
MET 980.0018
TYR 990.0023
GLY 1000.0025
CYS 1010.0030
ASP 1020.0032
VAL 1030.0036
GLY 1040.0039
SER 1050.0041
ASP 1060.0044
TRP 1070.0040
ARG 1080.0041
PHE 1090.0039
LEU 1100.0039
ARG 1110.0035
GLY 1120.0032
TYR 1130.0028
HIS 1140.0026
GLN 1150.0023
TYR 1160.0022
ALA 1170.0019
TYR 1180.0020
ASP 1190.0018
GLY 1200.0013
LYS 1210.0015
ASP 1220.0018
TYR 1230.0023
ILE 1240.0027
ALA 1250.0027
LEU 1260.0031
LYS 1270.0033
GLU 1280.0035
ASP 1290.0040
LEU 1300.0037
ARG 1310.0041
SER 1320.0039
TRP 1330.0035
THR 1340.0032
ALA 1350.0032
ALA 1360.0026
ASP 1370.0028
MET 1380.0033
ALA 1390.0034
ALA 1400.0032
GLN 1410.0037
THR 1420.0040
THR 1430.0036
LYS 1440.0038
HIS 1450.0043
LYS 1460.0042
TRP 1470.0039
GLU 1480.0044
ALA 1490.0047
ALA 1500.0043
HIS 1510.0043
VAL 1520.0037
ALA 1530.0038
GLU 1540.0042
GLN 1550.0037
LEU 1560.0034
ARG 1570.0038
ALA 1580.0038
TYR 1590.0033
LEU 1600.0033
GLU 1610.0038
GLY 1620.0037
THR 1630.0033
CYS 1640.0030
VAL 1650.0034
GLU 1660.0035
TRP 1670.0031
LEU 1680.0031
ARG 1690.0035
ARG 1700.0033
TYR 1710.0030
LEU 1720.0033
GLU 1730.0036
ASN 1740.0033
GLY 1750.0031
LYS 1760.0036
GLU 1770.0036
THR 1780.0031
LEU 1790.0030
GLN 1800.0035
ARG 1810.0035
THR 1820.0032
ASP 1830.0031
ALA 1840.0030
PRO 1850.0026
LYS 1860.0027
THR 1870.0023
HIS 1880.0022
MET 1890.0018
THR 1900.0017
HIS 1910.0013
HIS 1920.0013
ALA 1930.0012
VAL 1940.0016
SER 1950.0017
ASP 1960.0015
HIS 1970.0015
GLU 1980.0014
ALA 1990.0010
THR 2000.0010
LEU 2010.0009
ARG 2020.0011
CYS 2030.0014
TRP 2040.0017
ALA 2050.0019
LEU 2060.0022
SER 2070.0026
PHE 2080.0025
TYR 2090.0025
PRO 2100.0024
ALA 2110.0018
GLU 2120.0019
ILE 2130.0018
THR 2140.0016
LEU 2150.0014
THR 2160.0015
TRP 2170.0014
GLN 2180.0018
ARG 2190.0019
ASP 2200.0024
GLY 2210.0024
GLU 2220.0023
ASP 2230.0020
GLN 2240.0017
THR 2250.0018
GLN 2260.0018
ASP 2270.0016
THR 2280.0011
GLU 2290.0009
LEU 2300.0007
VAL 2310.0007
GLU 2320.0007
THR 2330.0011
ARG 2340.0013
PRO 2350.0016
ALA 2360.0020
GLY 2370.0022
ASP 2380.0026
GLY 2390.0024
THR 2400.0023
PHE 2410.0019
GLN 2420.0017
LYS 2430.0013
TRP 2440.0011
ALA 2450.0009
ALA 2460.0008
VAL 2470.0010
VAL 2480.0012
VAL 2490.0013
PRO 2500.0014
SER 2510.0012
GLY 2520.0013
GLN 2530.0015
GLU 2540.0013
GLN 2550.0017
ARG 2560.0019
TYR 2570.0016
THR 2580.0018
CYS 2590.0017
HIS 2600.0020
VAL 2610.0019
GLN 2620.0023
HIS 2630.0025
GLU 2640.0029
GLY 2650.0031
LEU 2660.0031
PRO 2670.0036
LYS 2680.0033
PRO 2690.0028
LEU 2700.0026
THR 2710.0025
LEU 2720.0022
ARG 2730.0022
TRP 2740.0018
GLU 2750.0021
PRO 2760.0027
GLN 2780.0013
ARG 2790.0010
THR 2800.0010
PRO 2810.0008
LYS 2820.0009
ILE 2830.0012
GLN 2840.0014
VAL 2850.0019
TYR 2860.0022
SER 2870.0025
ARG 2880.0025
HIS 2890.0030
PRO 2900.0032
ALA 2910.0034
GLU 2920.0040
ASN 2930.0043
GLY 2940.0046
LYS 2950.0043
SER 2960.0038
ASN 2970.0033
PHE 2980.0027
LEU 2990.0025
ASN 3000.0020
CYS 3010.0016
TYR 3020.0011
VAL 3030.0008
SER 3040.0004
GLY 3050.0002
PHE 3060.0006
HIS 3070.0009
PRO 3080.0012
SER 3090.0009
ASP 3100.0012
ILE 3110.0012
GLU 3120.0014
VAL 3130.0015
ASP 3140.0019
LEU 3150.0022
LEU 3160.0028
LYS 3170.0033
ASN 3180.0037
GLY 3190.0034
GLU 3200.0033
ARG 3210.0028
ILE 3220.0027
GLU 3230.0025
LYS 3240.0022
VAL 3250.0019
GLU 3260.0015
HIS 3270.0011
SER 3280.0009
ASP 3290.0005
LEU 3300.0002
SER 3310.0005
PHE 3320.0007
SER 3330.0008
LYS 3340.0011
ASP 3350.0009
TRP 3360.0009
SER 3370.0005
PHE 3380.0003
TYR 3390.0002
LEU 3400.0005
LEU 3410.0010
TYR 3420.0013
TYR 3430.0019
THR 3440.0024
GLU 3450.0029
PHE 3460.0033
THR 3470.0038
PRO 3480.0038
THR 3490.0043
GLU 3500.0044
LYS 3510.0045
ASP 3520.0040
GLU 3530.0036
TYR 3540.0030
ALA 3550.0026
CYS 3560.0021
ARG 3570.0022
VAL 3580.0017
ASN 3590.0018
HIS 3600.0016
VAL 3610.0019
THR 3620.0019
LEU 3630.0022
SER 3640.0028
GLN 3650.0027
PRO 3660.0024
LYS 3670.0023
ILE 3680.0024
VAL 3690.0023
LYS 3700.0026
TRP 3710.0026
ASP 3720.0027
ARG 3730.0028
ASP 3740.0028
MET 3750.0021
SER 10.0010
GLN 20.0010
PHE 30.0010
ARG 40.0010
VAL 50.0010
SER 60.0007
PRO 70.0004
LEU 80.0007
ASP 90.0007
ARG 100.0005
THR 110.0005
TRP 120.0004
ASN 130.0006
LEU 140.0005
GLY 150.0011
GLU 160.0009
THR 170.0010
VAL 180.0007
GLU 190.0007
LEU 200.0007
LYS 210.0008
CYS 220.0008
GLN 230.0008
VAL 240.0009
LEU 250.0010
LEU 260.0008
SER 270.0007
ASN 280.0008
PRO 290.0010
THR 300.0011
SER 310.0014
GLY 320.0014
CYS 330.0013
SER 340.0016
TRP 350.0016
LEU 360.0018
PHE 370.0017
GLN 380.0019
PRO 390.0018
ARG 400.0018
GLY 410.0024
ALA 420.0031
ALA 430.0034
ALA 440.0029
SER 450.0031
PRO 460.0025
THR 470.0026
PHE 480.0025
LEU 490.0023
LEU 500.0022
TYR 510.0021
LEU 520.0019
SER 530.0017
GLN 540.0017
ASN 550.0021
LYS 560.0026
PRO 570.0025
LYS 580.0027
ALA 590.0028
ALA 600.0030
GLU 610.0036
GLY 620.0033
LEU 630.0028
ASP 640.0025
THR 650.0027
GLN 660.0025
ARG 670.0020
PHE 680.0018
SER 690.0018
GLY 700.0016
LYS 710.0015
ARG 720.0013
LEU 730.0011
GLY 740.0010
ASP 750.0009
THR 760.0009
PHE 770.0011
VAL 780.0011
LEU 790.0012
THR 800.0013
LEU 810.0013
SER 820.0014
ASP 830.0013
PHE 840.0009
ARG 850.0009
ARG 860.0008
GLU 870.0014
ASN 880.0013
GLU 890.0010
GLY 900.0013
TYR 910.0012
TYR 920.0012
PHE 930.0012
CYS 940.0013
SER 950.0015
ALA 960.0014
LEU 970.0014
SER 980.0011
ASN 990.0013
SER 1000.0017
ILE 1010.0017
MET 1020.0017
TYR 1030.0014
PHE 1040.0014
SER 1050.0011
HIS 1060.0012
PHE 1070.0011
VAL 1080.0008
PRO 1090.0008
VAL 1100.0006
PHE 1110.0004
LEU 1120.0006
PRO 1130.0014
ALA 1140.0020
SER 10.0046
GLN 20.0047
PHE 30.0048
ARG 40.0053
VAL 50.0052
SER 60.0058
PRO 70.0061
LEU 80.0059
ASP 90.0065
ARG 100.0065
THR 110.0064
TRP 120.0064
ASN 130.0068
LEU 140.0067
GLY 150.0069
GLU 160.0068
THR 170.0064
VAL 180.0059
GLU 190.0058
LEU 200.0053
LYS 210.0053
CYS 220.0049
GLN 230.0051
VAL 240.0047
LEU 250.0051
LEU 260.0047
SER 270.0049
ASN 280.0044
PRO 290.0043
THR 300.0038
SER 310.0032
GLY 320.0033
CYS 330.0034
SER 340.0031
TRP 350.0035
LEU 360.0031
PHE 370.0033
GLN 380.0030
PRO 390.0033
ARG 400.0035
GLY 410.0025
ALA 420.0017
ALA 430.0013
ALA 440.0019
SER 450.0017
PRO 460.0023
THR 470.0024
PHE 480.0025
LEU 490.0031
LEU 500.0032
TYR 510.0029
LEU 520.0033
SER 530.0031
GLN 540.0031
ASN 550.0027
LYS 560.0030
PRO 570.0031
LYS 580.0026
ALA 590.0028
ALA 600.0025
GLU 610.0023
GLY 620.0032
LEU 630.0035
ASP 640.0044
THR 650.0043
GLN 660.0051
ARG 670.0052
PHE 680.0046
SER 690.0046
GLY 700.0045
LYS 710.0046
ARG 720.0046
LEU 730.0053
GLY 740.0053
ASP 750.0051
THR 760.0052
PHE 770.0047
VAL 780.0050
LEU 790.0047
THR 800.0052
LEU 810.0053
SER 820.0059
ASP 830.0062
PHE 840.0059
ARG 850.0057
ARG 860.0055
GLU 870.0048
ASN 880.0047
GLU 890.0047
GLY 900.0042
TYR 910.0039
TYR 920.0040
PHE 930.0038
CYS 940.0037
SER 950.0032
ALA 960.0033
LEU 970.0030
SER 980.0033
ASN 990.0032
SER 1000.0027
ILE 1010.0030
MET 1020.0028
TYR 1030.0033
PHE 1040.0034
SER 1050.0039
HIS 1060.0042
PHE 1070.0042
VAL 1080.0047
PRO 1090.0048
VAL 1100.0051
PHE 1110.0054
LEU 1120.0061
PRO 1130.0066
ALA 1140.0064

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.