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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1158
MET 10.0269
SER 20.0187
THR 30.0106
ILE 40.0056
THR 50.0073
LYS 60.0140
ASP 70.0166
GLN 80.0100
ILE 90.0065
LEU 100.0146
GLU 110.0148
GLY 120.0091
VAL 130.0081
ALA 140.0132
ALA 150.0117
LEU 160.0057
SER 170.0037
VAL 180.0037
MET 190.0038
GLU 200.0029
ILE 210.0041
VAL 220.0050
GLU 230.0041
LEU 240.0041
ILE 250.0062
SER 260.0054
ALA 270.0056
MET 280.0062
GLU 290.0065
GLU 300.0064
LYS 310.0074
PHE 320.0075
GLY 330.0074
VAL 340.0066
SER 350.0056
ALA 360.0057
ALA 370.0055
ALA 380.0055
VAL 390.0063
ALA 400.0084
ALA 410.0093
GLY 420.0113
PRO 430.0118
ALA 440.0121
ALA 450.0088
ALA 460.0079
VAL 470.0084
GLU 480.0068
ALA 490.0049
ALA 500.0051
GLU 510.0052
GLU 520.0048
GLN 530.0043
THR 540.0046
GLU 550.0041
PHE 560.0036
ASP 570.0034
VAL 580.0031
VAL 590.0027
LEU 600.0025
ALA 610.0019
SER 620.0022
PHE 630.0029
GLY 640.0032
GLU 650.0040
ASN 660.0044
LYS 670.0043
VAL 680.0051
ALA 690.0050
VAL 700.0043
ILE 710.0047
LYS 720.0054
ALA 730.0049
VAL 740.0046
ARG 750.0054
GLY 760.0056
ALA 770.0051
THR 780.0053
GLY 790.0061
LEU 800.0059
GLY 810.0063
LEU 820.0060
LYS 830.0056
GLU 840.0052
ALA 850.0049
LYS 860.0045
ASP 870.0041
LEU 880.0038
VAL 890.0035
GLU 900.0032
SER 910.0027
ALA 920.0023
PRO 930.0021
ALA 940.0027
VAL 950.0032
LEU 960.0036
LYS 970.0040
GLU 980.0041
GLY 990.0044
VAL 1000.0044
ASN 1010.0045
LYS 1020.0039
ASP 1030.0042
GLU 1040.0044
ALA 1050.0037
GLU 1060.0034
THR 1070.0040
LEU 1080.0039
LYS 1090.0032
LYS 1100.0034
SER 1110.0041
LEU 1120.0037
GLU 1130.0032
GLU 1140.0039
ALA 1150.0042
GLY 1160.0035
ALA 1170.0030
SER 1180.0023
VAL 1190.0023
GLU 1200.0021
ILE 1210.0026
LYS 1220.0026
GLU 1230.0030
ALA 1240.0034
ALA 1250.0032
ALA 1260.0033
LYS 1270.0028
ALA 1280.0025
TYR 1290.0027
LYS 1300.0024
ILE 1310.0031
ILE 1320.0015
SER 1330.0021
LEU 1340.0005
LYS 1350.0010
TYR 1360.0015
THR 1370.0014
ARG 1380.0038
LYS 1390.0037
VAL 1400.0059
CYS 1410.0071
ILE 1420.0094
GLY 1430.0106
PRO 1440.0114
GLY 1450.0136
PRO 1460.0111
GLY 1470.0076
LYS 1480.0087
ALA 1490.0076
TYR 1500.0080
LYS 1510.0106
ILE 1520.0082
ILE 1530.0105
SER 1540.0090
LEU 1550.0105
LYS 1560.0097
TYR 1570.0096
THR 1580.0090
ARG 1590.0089
LYS 1600.0089
VAL 1610.0076
CYS 1620.0082
GLY 1630.0065
PRO 1640.0089
GLY 1650.0110
PRO 1660.0140
GLY 1670.0162
GLY 1680.0138
LYS 1690.0156
ALA 1700.0129
TYR 1710.0144
LYS 1720.0139
ILE 1730.0145
ILE 1740.0146
SER 1750.0154
LEU 1760.0161
LYS 1770.0161
TYR 1780.0163
THR 1790.0157
ARG 1800.0158
LYS 1810.0140
VAL 1820.0133
GLY 1830.0105
PRO 1840.0065
GLY 1850.0024
PRO 1860.0022
GLY 1870.0021
ILE 1880.0014
ILE 1890.0041
SER 1900.0022
LEU 1910.0044
LYS 1920.0033
TYR 1930.0041
THR 1940.0036
ARG 1950.0040
LYS 1960.0037
VAL 1970.0031
CYS 1980.0032
ILE 1990.0017
GLN 2000.0019
LEU 2010.0015
GLY 2020.0016
GLY 2030.0017
PRO 2040.0016
GLY 2050.0013
PRO 2060.0012
GLY 2070.0011
ASN 2080.0013
ILE 2090.0015
LYS 2100.0012
THR 2110.0011
ALA 2120.0012
PHE 2130.0011
HIS 2140.0009
CYS 2150.0009
TYR 2160.0007
ALA 2170.0004
ALA 2180.0006
TYR 2190.0006
MET 2200.0003
THR 2210.0002
SER 2220.0007
ILE 2230.0012
LYS 2240.0014
ALA 2250.0020
CYS 2260.0052
ASP 2270.0050
LEU 2280.0059
LYS 2290.0072
LYS 2300.0086
PRO 2310.0095
LEU 2320.0114
MET 2330.0100
GLU 2340.0120
SER 2350.0139
GLY 2360.0134
TRP 2370.0103
SER 2380.0126
ASP 2390.0119
THR 2400.0157
ALA 2410.0189
HIS 2420.0215
GLY 2430.0211
LYS 2440.0340
LYS 2450.0330
SER 2460.0287
LEU 2470.0190
PRO 2480.0214
SER 2490.0334
SER 2500.0364
SER 2510.0301
SER 2520.0252
TYR 2530.0214
SER 2540.0175
TYR 2550.0133
ARG 2560.0136
ARG 2570.0088
LYS 2580.0068
LEU 2590.0019
THR 2600.0019
ASN 2610.0058
PRO 2620.0077
ALA 2630.0099
ASN 2640.0069
LYS 2650.0099
GLU 2660.0093
GLU 2670.0106
SER 2680.0120
ILE 2690.0106
LYS 2700.0150
LYS 2710.0167
GLN 2720.0134
LYS 2730.0120
TYR 2740.0100
SER 2750.0087
TYR 2760.0100
PRO 2770.0253
TRP 2780.0265
GLN 2790.0396
THR 2800.0547
SER 2810.0588
LYS 2820.0620
CYS 2830.0427
PHE 2840.0467
ASP 2880.0300
TYR 2890.0396
GLN 2900.1123
TYR 2910.1158
CYS 2970.0046
ASN 2980.0041
PRO 2990.0030
GLY 3000.0028
LYS 3010.0025
LYS 3020.0018
ASN 3030.0015
THR 3040.0020
ILE 3050.0019
SER 3060.0022
GLY 3070.0020
TYR 3080.0024
LYS 3090.0022
ARG 3100.0018
MET 3110.0021
MET 3120.0021
ALA 3130.0020
THR 3140.0020
LYS 3150.0021
ASP 3160.0020
SER 3170.0023
PHE 3180.0020
GLN 3190.0017
SER 3200.0013
PHE 3210.0012
ASN 3220.0007
LEU 3230.0008
THR 3240.0009
GLU 3250.0011
PRO 3260.0010
HIS 3270.0013
ILE 3280.0012
THR 3290.0014
THR 3300.0013
ASN 3310.0014
LYS 3320.0017
LEU 3330.0014
GLU 3340.0017
TRP 3350.0015
ILE 3360.0016
ASP 3370.0015
PRO 3380.0012
ASP 3390.0015
GLY 3400.0021
ASN 3410.0024
THR 3420.0029
ARG 3430.0049
GLY 3440.0068
GLY 3450.0087
GLY 3460.0106
GLY 10.0022
SER 20.0022
HIS 30.0020
SER 40.0019
MET 50.0018
ARG 60.0016
TYR 70.0015
PHE 80.0014
PHE 90.0014
THR 100.0013
SER 110.0015
VAL 120.0015
SER 130.0018
ARG 140.0019
PRO 150.0022
GLY 160.0022
ARG 170.0020
GLY 180.0019
GLU 190.0019
PRO 200.0018
ARG 210.0014
PHE 220.0014
ILE 230.0012
ALA 240.0013
VAL 250.0012
GLY 260.0013
TYR 270.0014
VAL 280.0016
ASP 290.0016
ASP 300.0013
THR 310.0013
GLN 320.0012
PHE 330.0013
VAL 340.0012
ARG 350.0011
PHE 360.0011
ASP 370.0010
SER 380.0012
ASP 390.0011
ALA 400.0009
ALA 410.0008
SER 420.0009
GLN 430.0012
ARG 440.0012
MET 450.0013
GLU 460.0011
PRO 470.0012
ARG 480.0010
ALA 490.0013
PRO 500.0014
TRP 510.0017
ILE 520.0016
GLU 530.0015
GLN 540.0017
GLU 550.0018
GLY 560.0019
PRO 570.0017
GLU 580.0020
TYR 590.0019
TRP 600.0016
ASP 610.0018
GLY 620.0020
GLU 630.0018
THR 640.0016
ARG 650.0019
LYS 660.0020
VAL 670.0017
LYS 680.0018
ALA 690.0021
HIS 700.0019
SER 710.0018
GLN 720.0021
THR 730.0023
HIS 740.0020
ARG 750.0021
VAL 760.0024
ASP 770.0023
LEU 780.0022
GLY 790.0025
THR 800.0027
LEU 810.0024
ARG 820.0025
GLY 830.0027
TYR 840.0025
TYR 850.0024
ASN 860.0028
GLN 870.0026
SER 880.0029
GLU 890.0030
ALA 900.0028
GLY 910.0021
SER 920.0019
HIS 930.0018
THR 940.0016
VAL 950.0017
GLN 960.0015
ARG 970.0017
MET 980.0016
TYR 990.0018
GLY 1000.0019
CYS 1010.0021
ASP 1020.0021
VAL 1030.0023
GLY 1040.0024
SER 1050.0025
ASP 1060.0027
TRP 1070.0025
ARG 1080.0026
PHE 1090.0026
LEU 1100.0025
ARG 1110.0023
GLY 1120.0022
TYR 1130.0021
HIS 1140.0020
GLN 1150.0019
TYR 1160.0018
ALA 1170.0016
TYR 1180.0017
ASP 1190.0016
GLY 1200.0013
LYS 1210.0014
ASP 1220.0016
TYR 1230.0019
ILE 1240.0020
ALA 1250.0020
LEU 1260.0022
LYS 1270.0023
GLU 1280.0023
ASP 1290.0026
LEU 1300.0025
ARG 1310.0027
SER 1320.0027
TRP 1330.0024
THR 1340.0023
ALA 1350.0023
ALA 1360.0019
ASP 1370.0020
MET 1380.0022
ALA 1390.0024
ALA 1400.0023
GLN 1410.0026
THR 1420.0027
THR 1430.0026
LYS 1440.0026
HIS 1450.0029
LYS 1460.0029
TRP 1470.0027
GLU 1480.0030
ALA 1490.0032
ALA 1500.0030
HIS 1510.0030
VAL 1520.0027
ALA 1530.0027
GLU 1540.0029
GLN 1550.0026
LEU 1560.0024
ARG 1570.0026
ALA 1580.0027
TYR 1590.0024
LEU 1600.0023
GLU 1610.0026
GLY 1620.0026
THR 1630.0023
CYS 1640.0022
VAL 1650.0023
GLU 1660.0024
TRP 1670.0021
LEU 1680.0021
ARG 1690.0023
ARG 1700.0022
TYR 1710.0019
LEU 1720.0021
GLU 1730.0022
ASN 1740.0020
GLY 1750.0019
LYS 1760.0021
GLU 1770.0020
THR 1780.0017
LEU 1790.0018
GLN 1800.0020
ARG 1810.0020
THR 1820.0018
ASP 1830.0016
ALA 1840.0016
PRO 1850.0013
LYS 1860.0012
THR 1870.0011
HIS 1880.0009
MET 1890.0007
THR 1900.0005
HIS 1910.0003
HIS 1920.0004
ALA 1930.0006
VAL 1940.0009
SER 1950.0010
ASP 1960.0010
HIS 1970.0011
GLU 1980.0010
ALA 1990.0007
THR 2000.0006
LEU 2010.0005
ARG 2020.0005
CYS 2030.0007
TRP 2040.0007
ALA 2050.0009
LEU 2060.0010
SER 2070.0012
PHE 2080.0013
TYR 2090.0014
PRO 2100.0014
ALA 2110.0011
GLU 2120.0012
ILE 2130.0012
THR 2140.0011
LEU 2150.0009
THR 2160.0011
TRP 2170.0011
GLN 2180.0013
ARG 2190.0014
ASP 2200.0016
GLY 2210.0016
GLU 2220.0016
ASP 2230.0014
GLN 2240.0013
THR 2250.0014
GLN 2260.0013
ASP 2270.0012
THR 2280.0010
GLU 2290.0008
LEU 2300.0007
VAL 2310.0004
GLU 2320.0005
THR 2330.0006
ARG 2340.0005
PRO 2350.0006
ALA 2360.0008
GLY 2370.0009
ASP 2380.0012
GLY 2390.0012
THR 2400.0011
PHE 2410.0009
GLN 2420.0007
LYS 2430.0006
TRP 2440.0005
ALA 2450.0006
ALA 2460.0006
VAL 2470.0009
VAL 2480.0009
VAL 2490.0010
PRO 2500.0012
SER 2510.0010
GLY 2520.0011
GLN 2530.0012
GLU 2540.0010
GLN 2550.0011
ARG 2560.0013
TYR 2570.0011
THR 2580.0011
CYS 2590.0010
HIS 2600.0012
VAL 2610.0011
GLN 2620.0014
HIS 2630.0015
GLU 2640.0017
GLY 2650.0017
LEU 2660.0017
PRO 2670.0020
LYS 2680.0019
PRO 2690.0016
LEU 2700.0014
THR 2710.0014
LEU 2720.0012
ARG 2730.0012
TRP 2740.0009
GLU 2750.0011
PRO 2760.0014
GLN 2780.0012
ARG 2790.0010
THR 2800.0009
PRO 2810.0007
LYS 2820.0005
ILE 2830.0005
GLN 2840.0004
VAL 2850.0006
TYR 2860.0007
SER 2870.0010
ARG 2880.0010
HIS 2890.0013
PRO 2900.0014
ALA 2910.0016
GLU 2920.0020
ASN 2930.0022
GLY 2940.0023
LYS 2950.0022
SER 2960.0019
ASN 2970.0015
PHE 2980.0012
LEU 2990.0010
ASN 3000.0006
CYS 3010.0004
TYR 3020.0001
VAL 3030.0003
SER 3040.0004
GLY 3050.0007
PHE 3060.0008
HIS 3070.0011
PRO 3080.0013
SER 3090.0010
ASP 3100.0010
ILE 3110.0008
GLU 3120.0008
VAL 3130.0007
ASP 3140.0009
LEU 3150.0010
LEU 3160.0013
LYS 3170.0016
ASN 3180.0019
GLY 3190.0018
GLU 3200.0017
ARG 3210.0014
ILE 3220.0013
GLU 3230.0012
LYS 3240.0009
VAL 3250.0007
GLU 3260.0004
HIS 3270.0002
SER 3280.0004
ASP 3290.0006
LEU 3300.0007
SER 3310.0009
PHE 3320.0010
SER 3330.0010
LYS 3340.0011
ASP 3350.0011
TRP 3360.0012
SER 3370.0009
PHE 3380.0008
TYR 3390.0005
LEU 3400.0003
LEU 3410.0002
TYR 3420.0003
TYR 3430.0006
THR 3440.0010
GLU 3450.0013
PHE 3460.0015
THR 3470.0019
PRO 3480.0018
THR 3490.0022
GLU 3500.0022
LYS 3510.0023
ASP 3520.0021
GLU 3530.0018
TYR 3540.0015
ALA 3550.0013
CYS 3560.0010
ARG 3570.0011
VAL 3580.0009
ASN 3590.0011
HIS 3600.0012
VAL 3610.0015
THR 3620.0015
LEU 3630.0017
SER 3640.0021
GLN 3650.0019
PRO 3660.0016
LYS 3670.0014
ILE 3680.0013
VAL 3690.0011
LYS 3700.0013
TRP 3710.0011
ASP 3720.0012
ARG 3730.0012
ASP 3740.0011
MET 3750.0007
SER 10.0010
GLN 20.0010
PHE 30.0010
ARG 40.0010
VAL 50.0009
SER 60.0008
PRO 70.0007
LEU 80.0007
ASP 90.0006
ARG 100.0004
THR 110.0002
TRP 120.0002
ASN 130.0003
LEU 140.0003
GLY 150.0005
GLU 160.0005
THR 170.0006
VAL 180.0006
GLU 190.0007
LEU 200.0008
LYS 210.0008
CYS 220.0009
GLN 230.0010
VAL 240.0010
LEU 250.0011
LEU 260.0009
SER 270.0008
ASN 280.0008
PRO 290.0010
THR 300.0011
SER 310.0012
GLY 320.0012
CYS 330.0011
SER 340.0012
TRP 350.0012
LEU 360.0012
PHE 370.0011
GLN 380.0011
PRO 390.0010
ARG 400.0009
GLY 410.0011
ALA 420.0013
ALA 430.0015
ALA 440.0014
SER 450.0015
PRO 460.0014
THR 470.0015
PHE 480.0015
LEU 490.0014
LEU 500.0014
TYR 510.0014
LEU 520.0013
SER 530.0013
GLN 540.0012
ASN 550.0014
LYS 560.0016
PRO 570.0015
LYS 580.0016
ALA 590.0017
ALA 600.0017
GLU 610.0019
GLY 620.0017
LEU 630.0015
ASP 640.0013
THR 650.0015
GLN 660.0013
ARG 670.0011
PHE 680.0011
SER 690.0012
GLY 700.0011
LYS 710.0011
ARG 720.0011
LEU 730.0010
GLY 740.0011
ASP 750.0010
THR 760.0010
PHE 770.0010
VAL 780.0009
LEU 790.0009
THR 800.0009
LEU 810.0008
SER 820.0008
ASP 830.0006
PHE 840.0005
ARG 850.0004
ARG 860.0002
GLU 870.0005
ASN 880.0007
GLU 890.0005
GLY 900.0008
TYR 910.0008
TYR 920.0009
PHE 930.0009
CYS 940.0010
SER 950.0012
ALA 960.0012
LEU 970.0012
SER 980.0010
ASN 990.0010
SER 1000.0013
ILE 1010.0012
MET 1020.0012
TYR 1030.0011
PHE 1040.0010
SER 1050.0009
HIS 1060.0009
PHE 1070.0008
VAL 1080.0007
PRO 1090.0006
VAL 1100.0006
PHE 1110.0003
LEU 1120.0001
PRO 1130.0004
ALA 1140.0006
SER 10.0023
GLN 20.0024
PHE 30.0024
ARG 40.0026
VAL 50.0025
SER 60.0027
PRO 70.0027
LEU 80.0026
ASP 90.0028
ARG 100.0027
THR 110.0026
TRP 120.0027
ASN 130.0028
LEU 140.0027
GLY 150.0028
GLU 160.0029
THR 170.0028
VAL 180.0026
GLU 190.0026
LEU 200.0025
LYS 210.0025
CYS 220.0024
GLN 230.0026
VAL 240.0025
LEU 250.0026
LEU 260.0025
SER 270.0026
ASN 280.0024
PRO 290.0024
THR 300.0022
SER 310.0020
GLY 320.0019
CYS 330.0019
SER 340.0018
TRP 350.0018
LEU 360.0016
PHE 370.0016
GLN 380.0014
PRO 390.0014
ARG 400.0014
GLY 410.0011
ALA 420.0009
ALA 430.0008
ALA 440.0010
SER 450.0010
PRO 460.0012
THR 470.0013
PHE 480.0014
LEU 490.0016
LEU 500.0017
TYR 510.0017
LEU 520.0019
SER 530.0018
GLN 540.0019
ASN 550.0017
LYS 560.0018
PRO 570.0017
LYS 580.0015
ALA 590.0015
ALA 600.0013
GLU 610.0010
GLY 620.0013
LEU 630.0016
ASP 640.0019
THR 650.0020
GLN 660.0023
ARG 670.0023
PHE 680.0021
SER 690.0022
GLY 700.0023
LYS 710.0024
ARG 720.0025
LEU 730.0027
GLY 740.0028
ASP 750.0026
THR 760.0026
PHE 770.0024
VAL 780.0025
LEU 790.0023
THR 800.0024
LEU 810.0024
SER 820.0026
ASP 830.0026
PHE 840.0025
ARG 850.0023
ARG 860.0022
GLU 870.0019
ASN 880.0019
GLU 890.0019
GLY 900.0018
TYR 910.0018
TYR 920.0019
PHE 930.0019
CYS 940.0019
SER 950.0018
ALA 960.0019
LEU 970.0018
SER 980.0020
ASN 990.0019
SER 1000.0017
ILE 1010.0018
MET 1020.0017
TYR 1030.0018
PHE 1040.0018
SER 1050.0020
HIS 1060.0020
PHE 1070.0019
VAL 1080.0021
PRO 1090.0021
VAL 1100.0022
PHE 1110.0022
LEU 1120.0024
PRO 1130.0026
ALA 1140.0025

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.