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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1713
MET 10.0065
SER 20.0047
THR 30.0027
ILE 40.0018
THR 50.0019
LYS 60.0033
ASP 70.0038
GLN 80.0023
ILE 90.0017
LEU 100.0032
GLU 110.0030
GLY 120.0019
VAL 130.0017
ALA 140.0025
ALA 150.0021
LEU 160.0012
SER 170.0011
VAL 180.0010
MET 190.0014
GLU 200.0011
ILE 210.0009
VAL 220.0012
GLU 230.0011
LEU 240.0009
ILE 250.0013
SER 260.0012
ALA 270.0013
MET 280.0015
GLU 290.0016
GLU 300.0017
LYS 310.0020
PHE 320.0020
GLY 330.0021
VAL 340.0018
SER 350.0016
ALA 360.0018
ALA 370.0017
ALA 380.0016
VAL 390.0021
ALA 400.0024
ALA 410.0021
GLY 420.0028
PRO 430.0028
ALA 440.0020
ALA 450.0012
ALA 460.0020
VAL 470.0020
GLU 480.0015
ALA 490.0019
ALA 500.0030
GLU 510.0031
GLU 520.0040
GLN 530.0033
THR 540.0047
GLU 550.0039
PHE 560.0038
ASP 570.0028
VAL 580.0038
VAL 590.0034
LEU 600.0042
ALA 610.0061
SER 620.0068
PHE 630.0065
GLY 640.0093
GLU 650.0103
ASN 660.0096
LYS 670.0067
VAL 680.0076
ALA 690.0096
VAL 700.0076
ILE 710.0063
LYS 720.0092
ALA 730.0095
VAL 740.0070
ARG 750.0087
GLY 760.0111
ALA 770.0096
THR 780.0085
GLY 790.0108
LEU 800.0091
GLY 810.0096
LEU 820.0079
LYS 830.0066
GLU 840.0063
ALA 850.0051
LYS 860.0032
ASP 870.0033
LEU 880.0025
VAL 890.0025
GLU 900.0029
SER 910.0040
ALA 920.0039
PRO 930.0042
ALA 940.0028
VAL 950.0022
LEU 960.0032
LYS 970.0044
GLU 980.0040
GLY 990.0048
VAL 1000.0063
ASN 1010.0076
LYS 1020.0081
ASP 1030.0107
GLU 1040.0098
ALA 1050.0076
GLU 1060.0101
THR 1070.0115
LEU 1080.0092
LYS 1090.0091
LYS 1100.0119
SER 1110.0116
LEU 1120.0093
GLU 1130.0111
GLU 1140.0132
ALA 1150.0111
GLY 1160.0110
ALA 1170.0084
SER 1180.0087
VAL 1190.0070
GLU 1200.0065
ILE 1210.0053
LYS 1220.0042
GLU 1230.0033
ALA 1240.0024
ALA 1250.0032
ALA 1260.0030
LYS 1270.0032
ALA 1280.0031
TYR 1290.0035
LYS 1300.0036
ILE 1310.0037
ILE 1320.0045
SER 1330.0039
LEU 1340.0048
LYS 1350.0043
TYR 1360.0058
THR 1370.0055
ARG 1380.0058
LYS 1390.0055
VAL 1400.0058
CYS 1410.0061
ILE 1420.0070
GLY 1430.0074
PRO 1440.0078
GLY 1450.0086
PRO 1460.0080
GLY 1470.0066
LYS 1480.0065
ALA 1490.0054
TYR 1500.0056
LYS 1510.0061
ILE 1520.0050
ILE 1530.0061
SER 1540.0052
LEU 1550.0061
LYS 1560.0053
TYR 1570.0062
THR 1580.0056
ARG 1590.0065
LYS 1600.0060
VAL 1610.0067
CYS 1620.0068
GLY 1630.0068
PRO 1640.0088
GLY 1650.0096
PRO 1660.0106
GLY 1670.0120
GLY 1680.0112
LYS 1690.0118
ALA 1700.0104
TYR 1710.0106
LYS 1720.0100
ILE 1730.0094
ILE 1740.0092
SER 1750.0086
LEU 1760.0086
LYS 1770.0079
TYR 1780.0080
THR 1790.0071
ARG 1800.0072
LYS 1810.0061
VAL 1820.0060
GLY 1830.0046
PRO 1840.0036
GLY 1850.0035
PRO 1860.0045
GLY 1870.0045
ILE 1880.0046
ILE 1890.0050
SER 1900.0045
LEU 1910.0050
LYS 1920.0043
TYR 1930.0051
THR 1940.0044
ARG 1950.0053
LYS 1960.0045
VAL 1970.0049
CYS 1980.0043
ILE 1990.0047
GLN 2000.0044
LEU 2010.0037
GLY 2020.0034
GLY 2030.0025
PRO 2040.0020
GLY 2050.0024
PRO 2060.0029
GLY 2070.0038
ASN 2080.0045
ILE 2090.0048
LYS 2100.0051
THR 2110.0055
ALA 2120.0060
PHE 2130.0057
HIS 2140.0052
CYS 2150.0058
TYR 2160.0061
ALA 2170.0048
ALA 2180.0037
TYR 2190.0041
MET 2200.0035
THR 2210.0030
SER 2220.0020
ILE 2230.0026
LYS 2240.0060
ALA 2250.0080
CYS 2260.0102
ASP 2270.0078
LEU 2280.0071
LYS 2290.0073
LYS 2300.0083
PRO 2310.0080
LEU 2320.0107
MET 2330.0116
GLU 2340.0162
SER 2350.0190
GLY 2360.0168
TRP 2370.0141
SER 2380.0143
ASP 2390.0121
THR 2400.0132
ALA 2410.0150
HIS 2420.0247
GLY 2430.0220
LYS 2440.0412
LYS 2450.0360
SER 2460.0213
LEU 2470.0077
PRO 2480.0099
SER 2490.0256
SER 2500.0359
SER 2510.0249
SER 2520.0193
TYR 2530.0192
SER 2540.0154
TYR 2550.0143
ARG 2560.0155
ARG 2570.0111
LYS 2580.0121
LEU 2590.0061
THR 2600.0068
ASN 2610.0052
PRO 2620.0091
ALA 2630.0040
ASN 2640.0092
LYS 2650.0128
GLU 2660.0159
GLU 2670.0169
SER 2680.0194
ILE 2690.0172
LYS 2700.0234
LYS 2710.0174
GLN 2720.0152
LYS 2730.0116
TYR 2740.0100
SER 2750.0086
TYR 2760.0165
PRO 2770.0181
TRP 2780.0224
GLN 2790.0163
THR 2800.0117
SER 2810.0161
LYS 2820.0082
CYS 2830.0047
PHE 2840.0253
ASP 2880.0129
TYR 2890.0109
GLN 2900.0256
TYR 2910.0299
CYS 2970.0339
ASN 2980.0269
PRO 2990.0222
GLY 3000.0183
LYS 3010.0156
LYS 3020.0161
ASN 3030.0154
THR 3040.0161
ILE 3050.0163
SER 3060.0165
GLY 3070.0148
TYR 3080.0158
LYS 3090.0173
ARG 3100.0167
MET 3110.0166
MET 3120.0180
ALA 3130.0204
THR 3140.0208
LYS 3150.0195
ASP 3160.0223
SER 3170.0230
PHE 3180.0192
GLN 3190.0194
SER 3200.0154
PHE 3210.0156
ASN 3220.0117
LEU 3230.0137
THR 3240.0158
GLU 3250.0193
PRO 3260.0193
HIS 3270.0267
ILE 3280.0261
THR 3290.0319
THR 3300.0322
ASN 3310.0325
LYS 3320.0312
LEU 3330.0262
GLU 3340.0280
TRP 3350.0240
ILE 3360.0245
ASP 3370.0251
PRO 3380.0192
ASP 3390.0238
GLY 3400.0335
ASN 3410.0377
THR 3420.0459
ARG 3430.0768
GLY 3440.1091
GLY 3450.1409
GLY 3460.1713
GLY 10.0079
SER 20.0078
HIS 30.0075
SER 40.0070
MET 50.0069
ARG 60.0059
TYR 70.0056
PHE 80.0043
PHE 90.0041
THR 100.0030
SER 110.0028
VAL 120.0019
SER 130.0016
ARG 140.0020
PRO 150.0014
GLY 160.0019
ARG 170.0027
GLY 180.0031
GLU 190.0031
PRO 200.0030
ARG 210.0039
PHE 220.0043
ILE 230.0045
ALA 240.0051
VAL 250.0053
GLY 260.0062
TYR 270.0059
VAL 280.0066
ASP 290.0056
ASP 300.0044
THR 310.0054
GLN 320.0057
PHE 330.0072
VAL 340.0074
ARG 350.0067
PHE 360.0068
ASP 370.0062
SER 380.0063
ASP 390.0066
ALA 400.0078
ALA 410.0095
SER 420.0099
GLN 430.0091
ARG 440.0094
MET 450.0088
GLU 460.0089
PRO 470.0088
ARG 480.0077
ALA 490.0080
PRO 500.0093
TRP 510.0097
ILE 520.0099
GLU 530.0107
GLN 540.0120
GLU 550.0120
GLY 560.0133
PRO 570.0133
GLU 580.0134
TYR 590.0120
TRP 600.0112
ASP 610.0118
GLY 620.0114
GLU 630.0099
THR 640.0096
ARG 650.0100
LYS 660.0090
VAL 670.0076
LYS 680.0077
ALA 690.0077
HIS 700.0065
SER 710.0054
GLN 720.0055
THR 730.0053
HIS 740.0042
ARG 750.0036
VAL 760.0038
ASP 770.0036
LEU 780.0023
GLY 790.0025
THR 800.0035
LEU 810.0030
ARG 820.0022
GLY 830.0031
TYR 840.0039
TYR 850.0036
ASN 860.0030
GLN 870.0025
SER 880.0021
GLU 890.0014
ALA 900.0017
GLY 910.0014
SER 920.0006
HIS 930.0006
THR 940.0012
VAL 950.0024
GLN 960.0028
ARG 970.0041
MET 980.0046
TYR 990.0059
GLY 1000.0066
CYS 1010.0075
ASP 1020.0078
VAL 1030.0089
GLY 1040.0093
SER 1050.0095
ASP 1060.0109
TRP 1070.0102
ARG 1080.0106
PHE 1090.0100
LEU 1100.0093
ARG 1110.0081
GLY 1120.0076
TYR 1130.0065
HIS 1140.0059
GLN 1150.0048
TYR 1160.0042
ALA 1170.0033
TYR 1180.0027
ASP 1190.0018
GLY 1200.0020
LYS 1210.0031
ASP 1220.0039
TYR 1230.0043
ILE 1240.0051
ALA 1250.0054
LEU 1260.0061
LYS 1270.0067
GLU 1280.0070
ASP 1290.0083
LEU 1300.0079
ARG 1310.0088
SER 1320.0081
TRP 1330.0069
THR 1340.0063
ALA 1350.0059
ALA 1360.0057
ASP 1370.0055
MET 1380.0060
ALA 1390.0052
ALA 1400.0052
GLN 1410.0065
THR 1420.0063
THR 1430.0059
LYS 1440.0067
HIS 1450.0075
LYS 1460.0071
TRP 1470.0072
GLU 1480.0083
ALA 1490.0087
ALA 1500.0083
HIS 1510.0088
VAL 1520.0078
ALA 1530.0081
GLU 1540.0092
GLN 1550.0089
LEU 1560.0080
ARG 1570.0089
ALA 1580.0097
TYR 1590.0089
LEU 1600.0086
GLU 1610.0100
GLY 1620.0106
THR 1630.0100
CYS 1640.0090
VAL 1650.0098
GLU 1660.0110
TRP 1670.0102
LEU 1680.0092
ARG 1690.0102
ARG 1700.0108
TYR 1710.0096
LEU 1720.0093
GLU 1730.0106
ASN 1740.0106
GLY 1750.0093
LYS 1760.0093
GLU 1770.0085
THR 1780.0074
LEU 1790.0072
GLN 1800.0076
ARG 1810.0058
THR 1820.0045
ASP 1830.0032
ALA 1840.0021
PRO 1850.0009
LYS 1860.0009
THR 1870.0020
HIS 1880.0031
MET 1890.0043
THR 1900.0051
HIS 1910.0064
HIS 1920.0069
ALA 1930.0078
VAL 1940.0076
SER 1950.0087
ASP 1960.0100
HIS 1970.0095
GLU 1980.0081
ALA 1990.0074
THR 2000.0060
LEU 2010.0057
ARG 2020.0045
CYS 2030.0036
TRP 2040.0025
ALA 2050.0013
LEU 2060.0013
SER 2070.0020
PHE 2080.0020
TYR 2090.0032
PRO 2100.0037
ALA 2110.0024
GLU 2120.0029
ILE 2130.0026
THR 2140.0033
LEU 2150.0033
THR 2160.0042
TRP 2170.0050
GLN 2180.0060
ARG 2190.0070
ASP 2200.0079
GLY 2210.0071
GLU 2220.0067
ASP 2230.0056
GLN 2240.0053
THR 2250.0046
GLN 2260.0044
ASP 2270.0047
THR 2280.0042
GLU 2290.0035
LEU 2300.0030
VAL 2310.0026
GLU 2320.0015
THR 2330.0009
ARG 2340.0012
PRO 2350.0023
ALA 2360.0033
GLY 2370.0046
ASP 2380.0051
GLY 2390.0046
THR 2400.0032
PHE 2410.0018
GLN 2420.0011
LYS 2430.0013
TRP 2440.0024
ALA 2450.0035
ALA 2460.0043
VAL 2470.0052
VAL 2480.0060
VAL 2490.0071
PRO 2500.0082
SER 2510.0091
GLY 2520.0097
GLN 2530.0088
GLU 2540.0079
GLN 2550.0083
ARG 2560.0080
TYR 2570.0067
THR 2580.0060
CYS 2590.0047
HIS 2600.0044
VAL 2610.0033
GLN 2620.0038
HIS 2630.0033
GLU 2640.0043
GLY 2650.0034
LEU 2660.0034
PRO 2670.0046
LYS 2680.0050
PRO 2690.0048
LEU 2700.0040
THR 2710.0051
LEU 2720.0049
ARG 2730.0061
TRP 2740.0064
GLU 2750.0075
PRO 2760.0075
GLN 2780.0036
ARG 2790.0026
THR 2800.0030
PRO 2810.0026
LYS 2820.0028
ILE 2830.0038
GLN 2840.0038
VAL 2850.0050
TYR 2860.0048
SER 2870.0053
ARG 2880.0048
HIS 2890.0051
PRO 2900.0052
ALA 2910.0067
GLU 2920.0079
ASN 2930.0095
GLY 2940.0104
LYS 2950.0093
SER 2960.0091
ASN 2970.0076
PHE 2980.0068
LEU 2990.0065
ASN 3000.0051
CYS 3010.0045
TYR 3020.0029
VAL 3030.0025
SER 3040.0013
GLY 3050.0016
PHE 3060.0016
HIS 3070.0012
PRO 3080.0007
SER 3090.0012
ASP 3100.0022
ILE 3110.0030
GLU 3120.0042
VAL 3130.0052
ASP 3140.0067
LEU 3150.0073
LEU 3160.0087
LYS 3170.0100
ASN 3180.0111
GLY 3190.0106
GLU 3200.0108
ARG 3210.0097
ILE 3220.0095
GLU 3230.0098
LYS 3240.0093
VAL 3250.0077
GLU 3260.0069
HIS 3270.0054
SER 3280.0045
ASP 3290.0044
LEU 3300.0032
SER 3310.0026
PHE 3320.0018
SER 3330.0018
LYS 3340.0028
ASP 3350.0028
TRP 3360.0021
SER 3370.0014
PHE 3380.0007
TYR 3390.0012
LEU 3400.0026
LEU 3410.0035
TYR 3420.0048
TYR 3430.0061
THR 3440.0076
GLU 3450.0084
PHE 3460.0089
THR 3470.0095
PRO 3480.0092
THR 3490.0105
GLU 3500.0108
LYS 3510.0119
ASP 3520.0111
GLU 3530.0101
TYR 3540.0087
ALA 3550.0077
CYS 3560.0064
ARG 3570.0066
VAL 3580.0050
ASN 3590.0045
HIS 3600.0035
VAL 3610.0032
THR 3620.0037
LEU 3630.0043
SER 3640.0048
GLN 3650.0051
PRO 3660.0054
LYS 3670.0060
ILE 3680.0074
VAL 3690.0068
LYS 3700.0076
TRP 3710.0070
ASP 3720.0070
ARG 3730.0061
ASP 3740.0061
MET 3750.0054
SER 10.0040
GLN 20.0040
PHE 30.0041
ARG 40.0042
VAL 50.0043
SER 60.0049
PRO 70.0045
LEU 80.0044
ASP 90.0044
ARG 100.0036
THR 110.0048
TRP 120.0047
ASN 130.0057
LEU 140.0056
GLY 150.0054
GLU 160.0044
THR 170.0040
VAL 180.0035
GLU 190.0044
LEU 200.0045
LYS 210.0042
CYS 220.0041
GLN 230.0042
VAL 240.0043
LEU 250.0042
LEU 260.0037
SER 270.0032
ASN 280.0032
PRO 290.0037
THR 300.0039
SER 310.0044
GLY 320.0043
CYS 330.0041
SER 340.0039
TRP 350.0038
LEU 360.0034
PHE 370.0030
GLN 380.0032
PRO 390.0030
ARG 400.0032
GLY 410.0058
ALA 420.0059
ALA 430.0051
ALA 440.0048
SER 450.0040
PRO 460.0036
THR 470.0035
PHE 480.0035
LEU 490.0035
LEU 500.0036
TYR 510.0041
LEU 520.0042
SER 530.0042
GLN 540.0044
ASN 550.0046
LYS 560.0045
PRO 570.0041
LYS 580.0039
ALA 590.0036
ALA 600.0034
GLU 610.0026
GLY 620.0024
LEU 630.0026
ASP 640.0025
THR 650.0026
GLN 660.0026
ARG 670.0025
PHE 680.0027
SER 690.0036
GLY 700.0043
LYS 710.0046
ARG 720.0046
LEU 730.0048
GLY 740.0049
ASP 750.0046
THR 760.0047
PHE 770.0044
VAL 780.0042
LEU 790.0038
THR 800.0038
LEU 810.0029
SER 820.0034
ASP 830.0035
PHE 840.0028
ARG 850.0030
ARG 860.0050
GLU 870.0043
ASN 880.0014
GLU 890.0013
GLY 900.0027
TYR 910.0032
TYR 920.0032
PHE 930.0035
CYS 940.0038
SER 950.0040
ALA 960.0040
LEU 970.0039
SER 980.0036
ASN 990.0037
SER 1000.0040
ILE 1010.0039
MET 1020.0038
TYR 1030.0038
PHE 1040.0038
SER 1050.0039
HIS 1060.0046
PHE 1070.0039
VAL 1080.0036
PRO 1090.0031
VAL 1100.0028
PHE 1110.0024
LEU 1120.0044
PRO 1130.0065
ALA 1140.0058
SER 10.0056
GLN 20.0052
PHE 30.0049
ARG 40.0051
VAL 50.0048
SER 60.0050
PRO 70.0055
LEU 80.0061
ASP 90.0069
ARG 100.0067
THR 110.0069
TRP 120.0067
ASN 130.0073
LEU 140.0074
GLY 150.0069
GLU 160.0063
THR 170.0053
VAL 180.0050
GLU 190.0044
LEU 200.0043
LYS 210.0041
CYS 220.0042
GLN 230.0044
VAL 240.0044
LEU 250.0052
LEU 260.0052
SER 270.0059
ASN 280.0056
PRO 290.0049
THR 300.0047
SER 310.0044
GLY 320.0039
CYS 330.0036
SER 340.0035
TRP 350.0036
LEU 360.0039
PHE 370.0044
GLN 380.0048
PRO 390.0055
ARG 400.0061
GLY 410.0059
ALA 420.0049
ALA 430.0043
ALA 440.0050
SER 450.0046
PRO 460.0042
THR 470.0041
PHE 480.0038
LEU 490.0038
LEU 500.0036
TYR 510.0035
LEU 520.0038
SER 530.0043
GLN 540.0049
ASN 550.0047
LYS 560.0045
PRO 570.0039
LYS 580.0039
ALA 590.0037
ALA 600.0037
GLU 610.0043
GLY 620.0046
LEU 630.0042
ASP 640.0049
THR 650.0047
GLN 660.0052
ARG 670.0049
PHE 680.0043
SER 690.0038
GLY 700.0034
LYS 710.0035
ARG 720.0036
LEU 730.0038
GLY 740.0043
ASP 750.0044
THR 760.0041
PHE 770.0036
VAL 780.0036
LEU 790.0037
THR 800.0040
LEU 810.0046
SER 820.0052
ASP 830.0061
PHE 840.0062
ARG 850.0068
ARG 860.0073
GLU 870.0067
ASN 880.0059
GLU 890.0063
GLY 900.0058
TYR 910.0052
TYR 920.0045
PHE 930.0042
CYS 940.0038
SER 950.0037
ALA 960.0038
LEU 970.0038
SER 980.0042
ASN 990.0043
SER 1000.0039
ILE 1010.0038
MET 1020.0037
TYR 1030.0039
PHE 1040.0040
SER 1050.0043
HIS 1060.0048
PHE 1070.0050
VAL 1080.0051
PRO 1090.0059
VAL 1100.0059
PHE 1110.0068
LEU 1120.0076
PRO 1130.0083
ALA 1140.0091

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.