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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0805
MET 10.0066
SER 20.0043
THR 30.0035
ILE 40.0017
THR 50.0025
LYS 60.0036
ASP 70.0039
GLN 80.0025
ILE 90.0023
LEU 100.0041
GLU 110.0041
GLY 120.0034
VAL 130.0034
ALA 140.0040
ALA 150.0037
LEU 160.0030
SER 170.0027
VAL 180.0026
MET 190.0029
GLU 200.0030
ILE 210.0027
VAL 220.0025
GLU 230.0033
LEU 240.0038
ILE 250.0035
SER 260.0035
ALA 270.0052
MET 280.0056
GLU 290.0052
GLU 300.0062
LYS 310.0080
PHE 320.0083
GLY 330.0076
VAL 340.0073
SER 350.0056
ALA 360.0070
ALA 370.0069
ALA 380.0072
VAL 390.0095
ALA 400.0106
ALA 410.0104
GLY 420.0117
PRO 430.0095
ALA 440.0093
ALA 450.0073
ALA 460.0040
VAL 470.0058
GLU 480.0077
ALA 490.0064
ALA 500.0073
GLU 510.0088
GLU 520.0084
GLN 530.0074
THR 540.0066
GLU 550.0057
PHE 560.0052
ASP 570.0041
VAL 580.0042
VAL 590.0041
LEU 600.0046
ALA 610.0057
SER 620.0063
PHE 630.0069
GLY 640.0089
GLU 650.0101
ASN 660.0103
LYS 670.0086
VAL 680.0097
ALA 690.0099
VAL 700.0080
ILE 710.0075
LYS 720.0087
ALA 730.0079
VAL 740.0059
ARG 750.0066
GLY 760.0072
ALA 770.0055
THR 780.0042
GLY 790.0058
LEU 800.0058
GLY 810.0077
LEU 820.0083
LYS 830.0076
GLU 840.0057
ALA 850.0055
LYS 860.0060
ASP 870.0045
LEU 880.0033
VAL 890.0046
GLU 900.0042
SER 910.0024
ALA 920.0032
PRO 930.0033
ALA 940.0024
VAL 950.0023
LEU 960.0024
LYS 970.0019
GLU 980.0024
GLY 990.0035
VAL 1000.0035
ASN 1010.0047
LYS 1020.0064
ASP 1030.0064
GLU 1040.0049
ALA 1050.0053
GLU 1060.0073
THR 1070.0070
LEU 1080.0060
LYS 1090.0072
LYS 1100.0087
SER 1110.0084
LEU 1120.0078
GLU 1130.0093
GLU 1140.0105
ALA 1150.0098
GLY 1160.0098
ALA 1170.0079
SER 1180.0077
VAL 1190.0066
GLU 1200.0066
ILE 1210.0059
LYS 1220.0057
GLU 1230.0062
ALA 1240.0052
ALA 1250.0055
ALA 1260.0064
LYS 1270.0067
ALA 1280.0056
TYR 1290.0070
LYS 1300.0060
ILE 1310.0060
ILE 1320.0046
SER 1330.0039
LEU 1340.0047
LYS 1350.0041
TYR 1360.0076
THR 1370.0098
ARG 1380.0138
LYS 1390.0172
VAL 1400.0198
CYS 1410.0254
ILE 1420.0273
GLY 1430.0340
PRO 1440.0359
GLY 1450.0424
PRO 1460.0463
GLY 1470.0436
LYS 1480.0360
ALA 1490.0314
TYR 1500.0258
LYS 1510.0185
ILE 1520.0169
ILE 1530.0099
SER 1540.0085
LEU 1550.0039
LYS 1560.0059
TYR 1570.0079
THR 1580.0108
ARG 1590.0148
LYS 1600.0181
VAL 1610.0208
CYS 1620.0248
GLY 1630.0261
PRO 1640.0339
GLY 1650.0385
PRO 1660.0442
GLY 1670.0489
GLY 1680.0438
LYS 1690.0443
ALA 1700.0371
TYR 1710.0361
LYS 1720.0305
ILE 1730.0276
ILE 1740.0228
SER 1750.0202
LEU 1760.0154
LYS 1770.0139
TYR 1780.0099
THR 1790.0130
ARG 1800.0133
LYS 1810.0199
VAL 1820.0229
GLY 1830.0298
PRO 1840.0349
GLY 1850.0359
PRO 1860.0328
GLY 1870.0257
ILE 1880.0225
ILE 1890.0161
SER 1900.0125
LEU 1910.0075
LYS 1920.0055
TYR 1930.0045
THR 1940.0037
ARG 1950.0081
LYS 1960.0087
VAL 1970.0089
CYS 1980.0089
ILE 1990.0082
GLN 2000.0088
LEU 2010.0056
GLY 2020.0050
GLY 2030.0037
PRO 2040.0028
GLY 2050.0030
PRO 2060.0023
GLY 2070.0025
ASN 2080.0026
ILE 2090.0026
LYS 2100.0027
THR 2110.0021
ALA 2120.0026
PHE 2130.0026
HIS 2140.0020
CYS 2150.0021
TYR 2160.0028
ALA 2170.0018
ALA 2180.0008
TYR 2190.0025
MET 2200.0026
THR 2210.0009
SER 2220.0015
ILE 2230.0015
LYS 2240.0019
ALA 2250.0016
CYS 2260.0098
ASP 2270.0108
LEU 2280.0167
LYS 2290.0181
LYS 2300.0242
PRO 2310.0216
LEU 2320.0221
MET 2330.0174
GLU 2340.0226
SER 2350.0242
GLY 2360.0220
TRP 2370.0169
SER 2380.0173
ASP 2390.0137
THR 2400.0173
ALA 2410.0210
HIS 2420.0368
GLY 2430.0310
LYS 2440.0540
LYS 2450.0440
SER 2460.0289
LEU 2470.0219
PRO 2480.0313
SER 2490.0535
SER 2500.0663
SER 2510.0456
SER 2520.0350
TYR 2530.0329
SER 2540.0245
TYR 2550.0215
ARG 2560.0201
ARG 2570.0139
LYS 2580.0134
LEU 2590.0055
THR 2600.0048
ASN 2610.0062
PRO 2620.0114
ALA 2630.0051
ASN 2640.0066
LYS 2650.0133
GLU 2660.0176
GLU 2670.0204
SER 2680.0235
ILE 2690.0210
LYS 2700.0293
LYS 2710.0212
GLN 2720.0171
LYS 2730.0118
TYR 2740.0097
SER 2750.0071
TYR 2760.0237
PRO 2770.0243
TRP 2780.0314
GLN 2790.0245
THR 2800.0181
SER 2810.0219
LYS 2820.0197
CYS 2830.0155
PHE 2840.0451
ASP 2880.0235
TYR 2890.0034
GLN 2900.0262
TYR 2910.0118
CYS 2970.0341
ASN 2980.0268
PRO 2990.0192
GLY 3000.0137
LYS 3010.0110
LYS 3020.0106
ASN 3030.0106
THR 3040.0108
ILE 3050.0110
SER 3060.0133
GLY 3070.0127
TYR 3080.0128
LYS 3090.0125
ARG 3100.0125
MET 3110.0127
MET 3120.0124
ALA 3130.0134
THR 3140.0131
LYS 3150.0123
ASP 3160.0126
SER 3170.0134
PHE 3180.0105
GLN 3190.0090
SER 3200.0063
PHE 3210.0054
ASN 3220.0035
LEU 3230.0038
THR 3240.0047
GLU 3250.0055
PRO 3260.0046
HIS 3270.0059
ILE 3280.0046
THR 3290.0054
THR 3300.0043
ASN 3310.0052
LYS 3320.0058
LEU 3330.0052
GLU 3340.0067
TRP 3350.0064
ILE 3360.0074
ASP 3370.0079
PRO 3380.0067
ASP 3390.0080
GLY 3400.0120
ASN 3410.0134
THR 3420.0168
ARG 3430.0328
GLY 3440.0492
GLY 3450.0648
GLY 3460.0805
GLY 10.0050
SER 20.0047
HIS 30.0042
SER 40.0037
MET 50.0033
ARG 60.0026
TYR 70.0020
PHE 80.0014
PHE 90.0009
THR 100.0004
SER 110.0006
VAL 120.0012
SER 130.0020
ARG 140.0026
PRO 150.0033
GLY 160.0041
ARG 170.0036
GLY 180.0030
GLU 190.0022
PRO 200.0015
ARG 210.0012
PHE 220.0006
ILE 230.0008
ALA 240.0011
VAL 250.0017
GLY 260.0024
TYR 270.0027
VAL 280.0033
ASP 290.0032
ASP 300.0026
THR 310.0030
GLN 320.0027
PHE 330.0031
VAL 340.0027
ARG 350.0022
PHE 360.0018
ASP 370.0016
SER 380.0015
ASP 390.0022
ALA 400.0026
ALA 410.0032
SER 420.0032
GLN 430.0024
ARG 440.0026
MET 450.0026
GLU 460.0030
PRO 470.0035
ARG 480.0033
ALA 490.0039
PRO 500.0046
TRP 510.0048
ILE 520.0044
GLU 530.0047
GLN 540.0053
GLU 550.0049
GLY 560.0051
PRO 570.0046
GLU 580.0044
TYR 590.0041
TRP 600.0036
ASP 610.0034
GLY 620.0032
GLU 630.0028
THR 640.0024
ARG 650.0022
LYS 660.0020
VAL 670.0015
LYS 680.0011
ALA 690.0011
HIS 700.0011
SER 710.0002
GLN 720.0005
THR 730.0011
HIS 740.0010
ARG 750.0012
VAL 760.0015
ASP 770.0017
LEU 780.0018
GLY 790.0022
THR 800.0024
LEU 810.0025
ARG 820.0030
GLY 830.0034
TYR 840.0035
TYR 850.0039
ASN 860.0048
GLN 870.0044
SER 880.0047
GLU 890.0045
ALA 900.0043
GLY 910.0032
SER 920.0025
HIS 930.0021
THR 940.0014
VAL 950.0013
GLN 960.0012
ARG 970.0016
MET 980.0019
TYR 990.0025
GLY 1000.0030
CYS 1010.0037
ASP 1020.0041
VAL 1030.0048
GLY 1040.0053
SER 1050.0057
ASP 1060.0062
TRP 1070.0056
ARG 1080.0056
PHE 1090.0052
LEU 1100.0051
ARG 1110.0044
GLY 1120.0039
TYR 1130.0033
HIS 1140.0029
GLN 1150.0025
TYR 1160.0022
ALA 1170.0021
TYR 1180.0021
ASP 1190.0020
GLY 1200.0018
LYS 1210.0023
ASP 1220.0026
TYR 1230.0028
ILE 1240.0030
ALA 1250.0030
LEU 1260.0035
LYS 1270.0039
GLU 1280.0041
ASP 1290.0047
LEU 1300.0043
ARG 1310.0047
SER 1320.0045
TRP 1330.0040
THR 1340.0038
ALA 1350.0037
ALA 1360.0036
ASP 1370.0037
MET 1380.0042
ALA 1390.0038
ALA 1400.0035
GLN 1410.0041
THR 1420.0040
THR 1430.0034
LYS 1440.0039
HIS 1450.0043
LYS 1460.0038
TRP 1470.0037
GLU 1480.0043
ALA 1490.0044
ALA 1500.0039
HIS 1510.0042
VAL 1520.0036
ALA 1530.0040
GLU 1540.0044
GLN 1550.0039
LEU 1560.0035
ARG 1570.0042
ALA 1580.0043
TYR 1590.0038
LEU 1600.0039
GLU 1610.0047
GLY 1620.0047
THR 1630.0042
CYS 1640.0039
VAL 1650.0046
GLU 1660.0050
TRP 1670.0045
LEU 1680.0044
ARG 1690.0051
ARG 1700.0051
TYR 1710.0046
LEU 1720.0049
GLU 1730.0057
ASN 1740.0055
GLY 1750.0050
LYS 1760.0055
GLU 1770.0054
THR 1780.0046
LEU 1790.0043
GLN 1800.0049
ARG 1810.0042
THR 1820.0036
ASP 1830.0032
ALA 1840.0028
PRO 1850.0021
LYS 1860.0020
THR 1870.0015
HIS 1880.0012
MET 1890.0007
THR 1900.0008
HIS 1910.0007
HIS 1920.0012
ALA 1930.0015
VAL 1940.0018
SER 1950.0022
ASP 1960.0023
HIS 1970.0022
GLU 1980.0018
ALA 1990.0014
THR 2000.0010
LEU 2010.0007
ARG 2020.0005
CYS 2030.0007
TRP 2040.0009
ALA 2050.0013
LEU 2060.0019
SER 2070.0024
PHE 2080.0024
TYR 2090.0027
PRO 2100.0027
ALA 2110.0020
GLU 2120.0020
ILE 2130.0017
THR 2140.0016
LEU 2150.0011
THR 2160.0012
TRP 2170.0012
GLN 2180.0015
ARG 2190.0017
ASP 2200.0020
GLY 2210.0019
GLU 2220.0019
ASP 2230.0017
GLN 2240.0016
THR 2250.0015
GLN 2260.0015
ASP 2270.0014
THR 2280.0012
GLU 2290.0009
LEU 2300.0008
VAL 2310.0004
GLU 2320.0005
THR 2330.0010
ARG 2340.0011
PRO 2350.0017
ALA 2360.0022
GLY 2370.0026
ASP 2380.0031
GLY 2390.0029
THR 2400.0025
PHE 2410.0019
GLN 2420.0015
LYS 2430.0010
TRP 2440.0006
ALA 2450.0006
ALA 2460.0007
VAL 2470.0011
VAL 2480.0013
VAL 2490.0015
PRO 2500.0018
SER 2510.0017
GLY 2520.0017
GLN 2530.0017
GLU 2540.0013
GLN 2550.0013
ARG 2560.0016
TYR 2570.0013
THR 2580.0012
CYS 2590.0011
HIS 2600.0014
VAL 2610.0015
GLN 2620.0021
HIS 2630.0024
GLU 2640.0031
GLY 2650.0031
LEU 2660.0029
PRO 2670.0034
LYS 2680.0030
PRO 2690.0025
LEU 2700.0019
THR 2710.0017
LEU 2720.0013
ARG 2730.0012
TRP 2740.0008
GLU 2750.0009
PRO 2760.0013
GLN 2780.0018
ARG 2790.0013
THR 2800.0011
PRO 2810.0007
LYS 2820.0005
ILE 2830.0011
GLN 2840.0013
VAL 2850.0018
TYR 2860.0020
SER 2870.0024
ARG 2880.0026
HIS 2890.0030
PRO 2900.0030
ALA 2910.0033
GLU 2920.0039
ASN 2930.0044
GLY 2940.0048
LYS 2950.0046
SER 2960.0043
ASN 2970.0036
PHE 2980.0031
LEU 2990.0027
ASN 3000.0021
CYS 3010.0017
TYR 3020.0011
VAL 3030.0007
SER 3040.0005
GLY 3050.0007
PHE 3060.0008
HIS 3070.0011
PRO 3080.0011
SER 3090.0008
ASP 3100.0011
ILE 3110.0010
GLU 3120.0013
VAL 3130.0015
ASP 3140.0021
LEU 3150.0025
LEU 3160.0030
LYS 3170.0036
ASN 3180.0040
GLY 3190.0037
GLU 3200.0038
ARG 3210.0033
ILE 3220.0033
GLU 3230.0033
LYS 3240.0031
VAL 3250.0027
GLU 3260.0024
HIS 3270.0019
SER 3280.0018
ASP 3290.0015
LEU 3300.0009
SER 3310.0008
PHE 3320.0009
SER 3330.0013
LYS 3340.0016
ASP 3350.0016
TRP 3360.0015
SER 3370.0012
PHE 3380.0005
TYR 3390.0005
LEU 3400.0008
LEU 3410.0013
TYR 3420.0017
TYR 3430.0024
THR 3440.0030
GLU 3450.0035
PHE 3460.0038
THR 3470.0041
PRO 3480.0040
THR 3490.0044
GLU 3500.0044
LYS 3510.0046
ASP 3520.0043
GLU 3530.0037
TYR 3540.0032
ALA 3550.0027
CYS 3560.0021
ARG 3570.0021
VAL 3580.0015
ASN 3590.0016
HIS 3600.0015
VAL 3610.0018
THR 3620.0016
LEU 3630.0018
SER 3640.0022
GLN 3650.0021
PRO 3660.0018
LYS 3670.0020
ILE 3680.0023
VAL 3690.0021
LYS 3700.0026
TRP 3710.0025
ASP 3720.0025
ARG 3730.0025
ASP 3740.0022
MET 3750.0016
SER 10.0019
GLN 20.0019
PHE 30.0019
ARG 40.0019
VAL 50.0018
SER 60.0020
PRO 70.0018
LEU 80.0016
ASP 90.0016
ARG 100.0012
THR 110.0012
TRP 120.0014
ASN 130.0018
LEU 140.0020
GLY 150.0023
GLU 160.0016
THR 170.0015
VAL 180.0012
GLU 190.0015
LEU 200.0015
LYS 210.0015
CYS 220.0016
GLN 230.0018
VAL 240.0019
LEU 250.0020
LEU 260.0016
SER 270.0013
ASN 280.0012
PRO 290.0015
THR 300.0014
SER 310.0016
GLY 320.0015
CYS 330.0015
SER 340.0014
TRP 350.0013
LEU 360.0011
PHE 370.0008
GLN 380.0008
PRO 390.0006
ARG 400.0008
GLY 410.0011
ALA 420.0011
ALA 430.0010
ALA 440.0009
SER 450.0010
PRO 460.0012
THR 470.0011
PHE 480.0012
LEU 490.0012
LEU 500.0013
TYR 510.0015
LEU 520.0015
SER 530.0014
GLN 540.0013
ASN 550.0013
LYS 560.0014
PRO 570.0014
LYS 580.0013
ALA 590.0013
ALA 600.0013
GLU 610.0012
GLY 620.0009
LEU 630.0009
ASP 640.0008
THR 650.0011
GLN 660.0011
ARG 670.0009
PHE 680.0009
SER 690.0012
GLY 700.0014
LYS 710.0015
ARG 720.0016
LEU 730.0018
GLY 740.0019
ASP 750.0019
THR 760.0019
PHE 770.0016
VAL 780.0015
LEU 790.0012
THR 800.0011
LEU 810.0011
SER 820.0014
ASP 830.0015
PHE 840.0011
ARG 850.0011
ARG 860.0017
GLU 870.0012
ASN 880.0002
GLU 890.0004
GLY 900.0010
TYR 910.0009
TYR 920.0010
PHE 930.0013
CYS 940.0014
SER 950.0015
ALA 960.0016
LEU 970.0015
SER 980.0014
ASN 990.0014
SER 1000.0015
ILE 1010.0015
MET 1020.0015
TYR 1030.0015
PHE 1040.0015
SER 1050.0015
HIS 1060.0017
PHE 1070.0013
VAL 1080.0013
PRO 1090.0010
VAL 1100.0008
PHE 1110.0005
LEU 1120.0011
PRO 1130.0013
ALA 1140.0007
SER 10.0014
GLN 20.0015
PHE 30.0015
ARG 40.0015
VAL 50.0014
SER 60.0014
PRO 70.0013
LEU 80.0013
ASP 90.0012
ARG 100.0013
THR 110.0013
TRP 120.0014
ASN 130.0015
LEU 140.0016
GLY 150.0017
GLU 160.0016
THR 170.0016
VAL 180.0015
GLU 190.0015
LEU 200.0015
LYS 210.0015
CYS 220.0015
GLN 230.0016
VAL 240.0016
LEU 250.0016
LEU 260.0016
SER 270.0017
ASN 280.0018
PRO 290.0017
THR 300.0018
SER 310.0017
GLY 320.0017
CYS 330.0016
SER 340.0015
TRP 350.0015
LEU 360.0014
PHE 370.0013
GLN 380.0013
PRO 390.0013
ARG 400.0012
GLY 410.0013
ALA 420.0012
ALA 430.0012
ALA 440.0013
SER 450.0013
PRO 460.0013
THR 470.0014
PHE 480.0014
LEU 490.0015
LEU 500.0016
TYR 510.0016
LEU 520.0017
SER 530.0017
GLN 540.0018
ASN 550.0018
LYS 560.0018
PRO 570.0017
LYS 580.0016
ALA 590.0016
ALA 600.0015
GLU 610.0015
GLY 620.0016
LEU 630.0015
ASP 640.0017
THR 650.0019
GLN 660.0020
ARG 670.0018
PHE 680.0017
SER 690.0018
GLY 700.0017
LYS 710.0018
ARG 720.0018
LEU 730.0019
GLY 740.0019
ASP 750.0018
THR 760.0017
PHE 770.0017
VAL 780.0016
LEU 790.0016
THR 800.0016
LEU 810.0016
SER 820.0017
ASP 830.0017
PHE 840.0016
ARG 850.0016
ARG 860.0015
GLU 870.0015
ASN 880.0015
GLU 890.0014
GLY 900.0013
TYR 910.0012
TYR 920.0013
PHE 930.0013
CYS 940.0014
SER 950.0014
ALA 960.0015
LEU 970.0015
SER 980.0015
ASN 990.0015
SER 1000.0015
ILE 1010.0014
MET 1020.0014
TYR 1030.0014
PHE 1040.0013
SER 1050.0013
HIS 1060.0012
PHE 1070.0012
VAL 1080.0012
PRO 1090.0012
VAL 1100.0013
PHE 1110.0013
LEU 1120.0013
PRO 1130.0013
ALA 1140.0013

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.