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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1141
MET 10.0150
SER 20.0115
THR 30.0068
ILE 40.0043
THR 50.0028
LYS 60.0052
ASP 70.0066
GLN 80.0037
ILE 90.0027
LEU 100.0059
GLU 110.0045
GLY 120.0020
VAL 130.0034
ALA 140.0046
ALA 150.0027
LEU 160.0020
SER 170.0010
VAL 180.0007
MET 190.0012
GLU 200.0018
ILE 210.0021
VAL 220.0022
GLU 230.0034
LEU 240.0038
ILE 250.0032
SER 260.0045
ALA 270.0069
MET 280.0057
GLU 290.0041
GLU 300.0074
LYS 310.0091
PHE 320.0067
GLY 330.0046
VAL 340.0011
SER 350.0022
ALA 360.0057
ALA 370.0088
ALA 380.0082
VAL 390.0097
ALA 400.0137
ALA 410.0141
GLY 420.0147
PRO 430.0135
ALA 440.0156
ALA 450.0141
ALA 460.0119
VAL 470.0129
GLU 480.0134
ALA 490.0118
ALA 500.0119
GLU 510.0126
GLU 520.0121
GLN 530.0111
THR 540.0120
GLU 550.0109
PHE 560.0099
ASP 570.0091
VAL 580.0094
VAL 590.0087
LEU 600.0090
ALA 610.0086
SER 620.0095
PHE 630.0107
GLY 640.0122
GLU 650.0136
ASN 660.0139
LYS 670.0125
VAL 680.0134
ALA 690.0141
VAL 700.0125
ILE 710.0120
LYS 720.0135
ALA 730.0134
VAL 740.0119
ARG 750.0125
GLY 760.0137
ALA 770.0129
THR 780.0119
GLY 790.0128
LEU 800.0114
GLY 810.0114
LEU 820.0115
LYS 830.0100
GLU 840.0094
ALA 850.0103
LYS 860.0099
ASP 870.0084
LEU 880.0084
VAL 890.0092
GLU 900.0085
SER 910.0070
ALA 920.0073
PRO 930.0068
ALA 940.0072
VAL 950.0079
LEU 960.0092
LYS 970.0097
GLU 980.0095
GLY 990.0105
VAL 1000.0114
ASN 1010.0126
LYS 1020.0126
ASP 1030.0139
GLU 1040.0132
ALA 1050.0120
GLU 1060.0130
THR 1070.0139
LEU 1080.0127
LYS 1090.0123
LYS 1100.0138
SER 1110.0140
LEU 1120.0127
GLU 1130.0131
GLU 1140.0146
ALA 1150.0140
GLY 1160.0133
ALA 1170.0117
SER 1180.0108
VAL 1190.0103
GLU 1200.0094
ILE 1210.0095
LYS 1220.0085
GLU 1230.0086
ALA 1240.0082
ALA 1250.0073
ALA 1260.0056
LYS 1270.0053
ALA 1280.0051
TYR 1290.0051
LYS 1300.0049
ILE 1310.0037
ILE 1320.0044
SER 1330.0040
LEU 1340.0046
LYS 1350.0044
TYR 1360.0043
THR 1370.0050
ARG 1380.0078
LYS 1390.0090
VAL 1400.0119
CYS 1410.0160
ILE 1420.0204
GLY 1430.0237
PRO 1440.0271
GLY 1450.0318
PRO 1460.0308
GLY 1470.0279
LYS 1480.0267
ALA 1490.0217
TYR 1500.0203
LYS 1510.0193
ILE 1520.0146
ILE 1530.0159
SER 1540.0120
LEU 1550.0128
LYS 1560.0103
TYR 1570.0099
THR 1580.0089
ARG 1590.0084
LYS 1600.0082
VAL 1610.0074
CYS 1620.0078
GLY 1630.0068
PRO 1640.0071
GLY 1650.0086
PRO 1660.0090
GLY 1670.0087
GLY 1680.0077
LYS 1690.0094
ALA 1700.0089
TYR 1710.0109
LYS 1720.0112
ILE 1730.0125
ILE 1740.0131
SER 1750.0145
LEU 1760.0166
LYS 1770.0171
TYR 1780.0185
THR 1790.0179
ARG 1800.0195
LYS 1810.0173
VAL 1820.0189
GLY 1830.0148
PRO 1840.0135
GLY 1850.0114
PRO 1860.0140
GLY 1870.0133
ILE 1880.0107
ILE 1890.0115
SER 1900.0074
LEU 1910.0077
LYS 1920.0053
TYR 1930.0057
THR 1940.0042
ARG 1950.0043
LYS 1960.0039
VAL 1970.0041
CYS 1980.0040
ILE 1990.0047
GLN 2000.0047
LEU 2010.0035
GLY 2020.0033
GLY 2030.0033
PRO 2040.0023
GLY 2050.0020
PRO 2060.0026
GLY 2070.0032
ASN 2080.0031
ILE 2090.0023
LYS 2100.0031
THR 2110.0055
ALA 2120.0055
PHE 2130.0050
HIS 2140.0058
CYS 2150.0066
TYR 2160.0076
ALA 2170.0075
ALA 2180.0080
TYR 2190.0082
MET 2200.0078
THR 2210.0089
SER 2220.0096
ILE 2230.0102
LYS 2240.0109
ALA 2250.0116
CYS 2260.0101
ASP 2270.0045
LEU 2280.0050
LYS 2290.0126
LYS 2300.0164
PRO 2310.0114
LEU 2320.0125
MET 2330.0081
GLU 2340.0099
SER 2350.0102
GLY 2360.0024
TRP 2370.0027
SER 2380.0058
ASP 2390.0061
THR 2400.0094
ALA 2410.0072
HIS 2420.0180
GLY 2430.0095
LYS 2440.0149
LYS 2450.0056
SER 2460.0105
LEU 2470.0136
PRO 2480.0201
SER 2490.0262
SER 2500.0278
SER 2510.0157
SER 2520.0108
TYR 2530.0104
SER 2540.0072
TYR 2550.0059
ARG 2560.0056
ARG 2570.0038
LYS 2580.0037
LEU 2590.0039
THR 2600.0053
ASN 2610.0065
PRO 2620.0099
ALA 2630.0102
ASN 2640.0085
LYS 2650.0057
GLU 2660.0019
GLU 2670.0023
SER 2680.0044
ILE 2690.0064
LYS 2700.0101
LYS 2710.0092
GLN 2720.0097
LYS 2730.0089
TYR 2740.0080
SER 2750.0081
TYR 2760.0093
PRO 2770.0118
TRP 2780.0126
GLN 2790.0078
THR 2800.0068
SER 2810.0103
LYS 2820.0046
CYS 2830.0042
PHE 2840.0148
ASP 2880.0051
TYR 2890.0053
GLN 2900.0098
TYR 2910.0137
CYS 2970.0740
ASN 2980.0523
PRO 2990.0348
GLY 3000.0202
LYS 3010.0276
LYS 3020.0367
ASN 3030.0306
THR 3040.0219
ILE 3050.0228
SER 3060.0273
GLY 3070.0309
TYR 3080.0270
LYS 3090.0230
ARG 3100.0282
MET 3110.0287
MET 3120.0233
ALA 3130.0264
THR 3140.0294
LYS 3150.0255
ASP 3160.0276
SER 3170.0319
PHE 3180.0284
GLN 3190.0273
SER 3200.0197
PHE 3210.0190
ASN 3220.0157
LEU 3230.0164
THR 3240.0139
GLU 3250.0152
PRO 3260.0199
HIS 3270.0275
ILE 3280.0323
THR 3290.0398
THR 3300.0458
ASN 3310.0480
LYS 3320.0419
LEU 3330.0353
GLU 3340.0314
TRP 3350.0256
ILE 3360.0234
ASP 3370.0268
PRO 3380.0211
ASP 3390.0286
GLY 3400.0370
ASN 3410.0418
THR 3420.0523
ARG 3430.0693
GLY 3440.0836
GLY 3450.0983
GLY 3460.1141
GLY 10.0028
SER 20.0027
HIS 30.0024
SER 40.0023
MET 50.0021
ARG 60.0020
TYR 70.0019
PHE 80.0016
PHE 90.0018
THR 100.0016
SER 110.0020
VAL 120.0021
SER 130.0029
ARG 140.0034
PRO 150.0042
GLY 160.0049
ARG 170.0045
GLY 180.0042
GLU 190.0038
PRO 200.0030
ARG 210.0023
PHE 220.0021
ILE 230.0017
ALA 240.0017
VAL 250.0015
GLY 260.0015
TYR 270.0015
VAL 280.0017
ASP 290.0017
ASP 300.0015
THR 310.0014
GLN 320.0013
PHE 330.0014
VAL 340.0015
ARG 350.0015
PHE 360.0018
ASP 370.0019
SER 380.0023
ASP 390.0023
ALA 400.0022
ALA 410.0025
SER 420.0023
GLN 430.0025
ARG 440.0023
MET 450.0021
GLU 460.0016
PRO 470.0014
ARG 480.0012
ALA 490.0012
PRO 500.0012
TRP 510.0014
ILE 520.0016
GLU 530.0015
GLN 540.0016
GLU 550.0019
GLY 560.0023
PRO 570.0024
GLU 580.0028
TYR 590.0025
TRP 600.0023
ASP 610.0028
GLY 620.0029
GLU 630.0026
THR 640.0026
ARG 650.0030
LYS 660.0031
VAL 670.0027
LYS 680.0030
ALA 690.0033
HIS 700.0029
SER 710.0028
GLN 720.0035
THR 730.0035
HIS 740.0029
ARG 750.0032
VAL 760.0039
ASP 770.0034
LEU 780.0032
GLY 790.0039
THR 800.0039
LEU 810.0032
ARG 820.0036
GLY 830.0043
TYR 840.0037
TYR 850.0032
ASN 860.0044
GLN 870.0042
SER 880.0049
GLU 890.0052
ALA 900.0050
GLY 910.0038
SER 920.0031
HIS 930.0025
THR 940.0018
VAL 950.0019
GLN 960.0017
ARG 970.0020
MET 980.0020
TYR 990.0024
GLY 1000.0026
CYS 1010.0028
ASP 1020.0029
VAL 1030.0030
GLY 1040.0032
SER 1050.0031
ASP 1060.0033
TRP 1070.0030
ARG 1080.0033
PHE 1090.0034
LEU 1100.0036
ARG 1110.0035
GLY 1120.0032
TYR 1130.0029
HIS 1140.0028
GLN 1150.0025
TYR 1160.0022
ALA 1170.0016
TYR 1180.0016
ASP 1190.0014
GLY 1200.0010
LYS 1210.0012
ASP 1220.0016
TYR 1230.0020
ILE 1240.0026
ALA 1250.0030
LEU 1260.0033
LYS 1270.0036
GLU 1280.0038
ASP 1290.0043
LEU 1300.0040
ARG 1310.0046
SER 1320.0043
TRP 1330.0037
THR 1340.0034
ALA 1350.0031
ALA 1360.0028
ASP 1370.0021
MET 1380.0026
ALA 1390.0028
ALA 1400.0030
GLN 1410.0036
THR 1420.0039
THR 1430.0037
LYS 1440.0040
HIS 1450.0047
LYS 1460.0046
TRP 1470.0044
GLU 1480.0050
ALA 1490.0056
ALA 1500.0053
HIS 1510.0051
VAL 1520.0043
ALA 1530.0043
GLU 1540.0049
GLN 1550.0044
LEU 1560.0037
ARG 1570.0041
ALA 1580.0042
TYR 1590.0035
LEU 1600.0033
GLU 1610.0037
GLY 1620.0035
THR 1630.0031
CYS 1640.0028
VAL 1650.0029
GLU 1660.0028
TRP 1670.0024
LEU 1680.0023
ARG 1690.0024
ARG 1700.0022
TYR 1710.0019
LEU 1720.0021
GLU 1730.0021
ASN 1740.0017
GLY 1750.0016
LYS 1760.0019
GLU 1770.0017
THR 1780.0015
LEU 1790.0017
GLN 1800.0020
ARG 1810.0018
THR 1820.0017
ASP 1830.0015
ALA 1840.0015
PRO 1850.0012
LYS 1860.0016
THR 1870.0019
HIS 1880.0021
MET 1890.0024
THR 1900.0024
HIS 1910.0034
HIS 1920.0039
ALA 1930.0052
VAL 1940.0059
SER 1950.0071
ASP 1960.0078
HIS 1970.0080
GLU 1980.0069
ALA 1990.0056
THR 2000.0044
LEU 2010.0036
ARG 2020.0029
CYS 2030.0025
TRP 2040.0017
ALA 2050.0013
LEU 2060.0011
SER 2070.0011
PHE 2080.0012
TYR 2090.0013
PRO 2100.0014
ALA 2110.0011
GLU 2120.0012
ILE 2130.0013
THR 2140.0016
LEU 2150.0018
THR 2160.0024
TRP 2170.0033
GLN 2180.0041
ARG 2190.0050
ASP 2200.0055
GLY 2210.0046
GLU 2220.0043
ASP 2230.0037
GLN 2240.0040
THR 2250.0034
GLN 2260.0041
ASP 2270.0045
THR 2280.0037
GLU 2290.0034
LEU 2300.0025
VAL 2310.0015
GLU 2320.0014
THR 2330.0012
ARG 2340.0011
PRO 2350.0010
ALA 2360.0010
GLY 2370.0011
ASP 2380.0012
GLY 2390.0012
THR 2400.0010
PHE 2410.0009
GLN 2420.0011
LYS 2430.0014
TRP 2440.0018
ALA 2450.0022
ALA 2460.0034
VAL 2470.0044
VAL 2480.0053
VAL 2490.0059
PRO 2500.0070
SER 2510.0070
GLY 2520.0073
GLN 2530.0067
GLU 2540.0058
GLN 2550.0060
ARG 2560.0057
TYR 2570.0048
THR 2580.0041
CYS 2590.0032
HIS 2600.0027
VAL 2610.0017
GLN 2620.0017
HIS 2630.0016
GLU 2640.0017
GLY 2650.0017
LEU 2660.0022
PRO 2670.0025
LYS 2680.0027
PRO 2690.0025
LEU 2700.0025
THR 2710.0034
LEU 2720.0034
ARG 2730.0043
TRP 2740.0043
GLU 2750.0051
PRO 2760.0054
GLN 2780.0014
ARG 2790.0010
THR 2800.0012
PRO 2810.0009
LYS 2820.0009
ILE 2830.0004
GLN 2840.0006
VAL 2850.0006
TYR 2860.0009
SER 2870.0009
ARG 2880.0011
HIS 2890.0014
PRO 2900.0015
ALA 2910.0016
GLU 2920.0020
ASN 2930.0022
GLY 2940.0022
LYS 2950.0021
SER 2960.0017
ASN 2970.0014
PHE 2980.0011
LEU 2990.0008
ASN 3000.0007
CYS 3010.0004
TYR 3020.0004
VAL 3030.0005
SER 3040.0005
GLY 3050.0006
PHE 3060.0008
HIS 3070.0011
PRO 3080.0016
SER 3090.0015
ASP 3100.0018
ILE 3110.0016
GLU 3120.0017
VAL 3130.0010
ASP 3140.0008
LEU 3150.0005
LEU 3160.0008
LYS 3170.0009
ASN 3180.0013
GLY 3190.0014
GLU 3200.0010
ARG 3210.0008
ILE 3220.0004
GLU 3230.0006
LYS 3240.0007
VAL 3250.0006
GLU 3260.0009
HIS 3270.0008
SER 3280.0009
ASP 3290.0011
LEU 3300.0011
SER 3310.0011
PHE 3320.0011
SER 3330.0014
LYS 3340.0016
ASP 3350.0013
TRP 3360.0012
SER 3370.0010
PHE 3380.0008
TYR 3390.0007
LEU 3400.0007
LEU 3410.0006
TYR 3420.0005
TYR 3430.0005
THR 3440.0006
GLU 3450.0010
PHE 3460.0011
THR 3470.0015
PRO 3480.0016
THR 3490.0019
GLU 3500.0022
LYS 3510.0021
ASP 3520.0017
GLU 3530.0016
TYR 3540.0012
ALA 3550.0012
CYS 3560.0010
ARG 3570.0013
VAL 3580.0019
ASN 3590.0024
HIS 3600.0022
VAL 3610.0028
THR 3620.0025
LEU 3630.0034
SER 3640.0047
GLN 3650.0047
PRO 3660.0039
LYS 3670.0036
ILE 3680.0014
VAL 3690.0013
LYS 3700.0013
TRP 3710.0012
ASP 3720.0016
ARG 3730.0012
ASP 3740.0011
MET 3750.0009
SER 10.0039
GLN 20.0033
PHE 30.0031
ARG 40.0032
VAL 50.0035
SER 60.0043
PRO 70.0049
LEU 80.0058
ASP 90.0068
ARG 100.0068
THR 110.0077
TRP 120.0075
ASN 130.0091
LEU 140.0100
GLY 150.0095
GLU 160.0078
THR 170.0065
VAL 180.0055
GLU 190.0044
LEU 200.0036
LYS 210.0029
CYS 220.0026
GLN 230.0021
VAL 240.0020
LEU 250.0024
LEU 260.0023
SER 270.0020
ASN 280.0021
PRO 290.0019
THR 300.0023
SER 310.0020
GLY 320.0012
CYS 330.0010
SER 340.0012
TRP 350.0018
LEU 360.0021
PHE 370.0029
GLN 380.0037
PRO 390.0047
ARG 400.0061
GLY 410.0061
ALA 420.0068
ALA 430.0058
ALA 440.0044
SER 450.0034
PRO 460.0027
THR 470.0016
PHE 480.0010
LEU 490.0014
LEU 500.0015
TYR 510.0010
LEU 520.0010
SER 530.0012
GLN 540.0017
ASN 550.0024
LYS 560.0035
PRO 570.0026
LYS 580.0026
ALA 590.0023
ALA 600.0018
GLU 610.0023
GLY 620.0031
LEU 630.0036
ASP 640.0057
THR 650.0062
GLN 660.0076
ARG 670.0069
PHE 680.0053
SER 690.0048
GLY 700.0036
LYS 710.0025
ARG 720.0019
LEU 730.0020
GLY 740.0014
ASP 750.0011
THR 760.0015
PHE 770.0018
VAL 780.0027
LEU 790.0032
THR 800.0043
LEU 810.0061
SER 820.0071
ASP 830.0082
PHE 840.0077
ARG 850.0084
ARG 860.0094
GLU 870.0085
ASN 880.0068
GLU 890.0067
GLY 900.0056
TYR 910.0049
TYR 920.0039
PHE 930.0033
CYS 940.0024
SER 950.0024
ALA 960.0022
LEU 970.0027
SER 980.0030
ASN 990.0039
SER 1000.0045
ILE 1010.0045
MET 1020.0038
TYR 1030.0037
PHE 1040.0037
SER 1050.0039
HIS 1060.0050
PHE 1070.0049
VAL 1080.0050
PRO 1090.0058
VAL 1100.0058
PHE 1110.0075
LEU 1120.0094
PRO 1130.0114
ALA 1140.0126
SER 10.0040
GLN 20.0051
PHE 30.0061
ARG 40.0072
VAL 50.0079
SER 60.0096
PRO 70.0105
LEU 80.0093
ASP 90.0106
ARG 100.0119
THR 110.0127
TRP 120.0140
ASN 130.0156
LEU 140.0164
GLY 150.0169
GLU 160.0160
THR 170.0149
VAL 180.0131
GLU 190.0124
LEU 200.0106
LYS 210.0099
CYS 220.0084
GLN 230.0085
VAL 240.0074
LEU 250.0073
LEU 260.0065
SER 270.0071
ASN 280.0073
PRO 290.0074
THR 300.0080
SER 310.0065
GLY 320.0069
CYS 330.0066
SER 340.0062
TRP 350.0071
LEU 360.0063
PHE 370.0072
GLN 380.0071
PRO 390.0086
ARG 400.0089
GLY 410.0082
ALA 420.0075
ALA 430.0073
ALA 440.0070
SER 450.0057
PRO 460.0054
THR 470.0063
PHE 480.0061
LEU 490.0075
LEU 500.0076
TYR 510.0069
LEU 520.0079
SER 530.0078
GLN 540.0086
ASN 550.0084
LYS 560.0090
PRO 570.0085
LYS 580.0073
ALA 590.0077
ALA 600.0070
GLU 610.0068
GLY 620.0090
LEU 630.0098
ASP 640.0120
THR 650.0120
GLN 660.0141
ARG 670.0137
PHE 680.0119
SER 690.0118
GLY 700.0110
LYS 710.0112
ARG 720.0108
LEU 730.0119
GLY 740.0114
ASP 750.0098
THR 760.0099
PHE 770.0096
VAL 780.0107
LEU 790.0105
THR 800.0121
LEU 810.0128
SER 820.0147
ASP 830.0157
PHE 840.0144
ARG 850.0147
ARG 860.0144
GLU 870.0131
ASN 880.0119
GLU 890.0114
GLY 900.0094
TYR 910.0078
TYR 920.0077
PHE 930.0063
CYS 940.0059
SER 950.0046
ALA 960.0047
LEU 970.0041
SER 980.0045
ASN 990.0042
SER 1000.0030
ILE 1010.0025
MET 1020.0024
TYR 1030.0031
PHE 1040.0036
SER 1050.0046
HIS 1060.0048
PHE 1070.0061
VAL 1080.0079
PRO 1090.0089
VAL 1100.0105
PHE 1110.0117
LEU 1120.0137
PRO 1130.0142
ALA 1140.0143

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.