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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1216
MET 10.1216
SER 20.0937
THR 30.0775
ILE 40.0539
THR 50.0330
LYS 60.0183
ASP 70.0151
GLN 80.0212
ILE 90.0317
LEU 100.0312
GLU 110.0300
GLY 120.0318
VAL 130.0339
ALA 140.0347
ALA 150.0363
LEU 160.0270
SER 170.0170
VAL 180.0181
MET 190.0134
GLU 200.0115
ILE 210.0048
VAL 220.0208
GLU 230.0286
LEU 240.0221
ILE 250.0190
SER 260.0416
ALA 270.0485
MET 280.0355
GLU 290.0391
GLU 300.0621
LYS 310.0638
PHE 320.0502
GLY 330.0509
VAL 340.0292
SER 350.0297
ALA 360.0253
ALA 370.0332
ALA 380.0177
VAL 390.0171
ALA 400.0341
ALA 410.0312
GLY 420.0327
PRO 430.0308
ALA 440.0341
ALA 450.0236
ALA 460.0138
VAL 470.0166
GLU 480.0153
ALA 490.0087
ALA 500.0057
GLU 510.0043
GLU 520.0049
GLN 530.0045
THR 540.0043
GLU 550.0040
PHE 560.0040
ASP 570.0038
VAL 580.0041
VAL 590.0045
LEU 600.0047
ALA 610.0059
SER 620.0059
PHE 630.0053
GLY 640.0067
GLU 650.0069
ASN 660.0064
LYS 670.0048
VAL 680.0051
ALA 690.0062
VAL 700.0053
ILE 710.0044
LYS 720.0058
ALA 730.0061
VAL 740.0047
ARG 750.0053
GLY 760.0066
ALA 770.0057
THR 780.0050
GLY 790.0062
LEU 800.0054
GLY 810.0060
LEU 820.0053
LYS 830.0048
GLU 840.0045
ALA 850.0038
LYS 860.0033
ASP 870.0035
LEU 880.0032
VAL 890.0034
GLU 900.0037
SER 910.0044
ALA 920.0044
PRO 930.0047
ALA 940.0040
VAL 950.0035
LEU 960.0034
LYS 970.0034
GLU 980.0034
GLY 990.0034
VAL 1000.0040
ASN 1010.0049
LYS 1020.0058
ASP 1030.0070
GLU 1040.0061
ALA 1050.0054
GLU 1060.0071
THR 1070.0074
LEU 1080.0061
LYS 1090.0066
LYS 1100.0081
SER 1110.0076
LEU 1120.0064
GLU 1130.0078
GLU 1140.0087
ALA 1150.0074
GLY 1160.0076
ALA 1170.0062
SER 1180.0069
VAL 1190.0060
GLU 1200.0063
ILE 1210.0053
LYS 1220.0051
GLU 1230.0047
ALA 1240.0039
ALA 1250.0049
ALA 1260.0043
LYS 1270.0041
ALA 1280.0039
TYR 1290.0041
LYS 1300.0038
ILE 1310.0040
ILE 1320.0041
SER 1330.0040
LEU 1340.0041
LYS 1350.0040
TYR 1360.0042
THR 1370.0041
ARG 1380.0045
LYS 1390.0045
VAL 1400.0049
CYS 1410.0051
ILE 1420.0060
GLY 1430.0063
PRO 1440.0071
GLY 1450.0079
PRO 1460.0081
GLY 1470.0079
LYS 1480.0074
ALA 1490.0064
TYR 1500.0060
LYS 1510.0056
ILE 1520.0051
ILE 1530.0052
SER 1540.0048
LEU 1550.0051
LYS 1560.0047
TYR 1570.0051
THR 1580.0050
ARG 1590.0054
LYS 1600.0053
VAL 1610.0058
CYS 1620.0059
GLY 1630.0063
PRO 1640.0069
GLY 1650.0070
PRO 1660.0076
GLY 1670.0082
GLY 1680.0080
LYS 1690.0078
ALA 1700.0073
TYR 1710.0068
LYS 1720.0066
ILE 1730.0060
ILE 1740.0059
SER 1750.0054
LEU 1760.0055
LYS 1770.0050
TYR 1780.0051
THR 1790.0046
ARG 1800.0047
LYS 1810.0045
VAL 1820.0049
GLY 1830.0047
PRO 1840.0052
GLY 1850.0052
PRO 1860.0053
GLY 1870.0051
ILE 1880.0047
ILE 1890.0050
SER 1900.0044
LEU 1910.0045
LYS 1920.0043
TYR 1930.0045
THR 1940.0044
ARG 1950.0046
LYS 1960.0043
VAL 1970.0042
CYS 1980.0042
ILE 1990.0041
GLN 2000.0041
LEU 2010.0030
GLY 2020.0029
GLY 2030.0026
PRO 2040.0019
GLY 2050.0016
PRO 2060.0005
GLY 2070.0004
ASN 2080.0004
ILE 2090.0005
LYS 2100.0005
THR 2110.0012
ALA 2120.0013
PHE 2130.0004
HIS 2140.0011
CYS 2150.0016
TYR 2160.0016
ALA 2170.0020
ALA 2180.0032
TYR 2190.0032
MET 2200.0028
THR 2210.0041
SER 2220.0043
ILE 2230.0045
LYS 2240.0048
ALA 2250.0050
CYS 2260.0073
ASP 2270.0040
LEU 2280.0030
LYS 2290.0036
LYS 2300.0057
PRO 2310.0062
LEU 2320.0081
MET 2330.0068
GLU 2340.0086
SER 2350.0094
GLY 2360.0056
TRP 2370.0047
SER 2380.0057
ASP 2390.0050
THR 2400.0065
ALA 2410.0046
HIS 2420.0080
GLY 2430.0036
LYS 2440.0042
LYS 2450.0014
SER 2460.0056
LEU 2470.0062
PRO 2480.0093
SER 2490.0109
SER 2500.0100
SER 2510.0044
SER 2520.0028
TYR 2530.0028
SER 2540.0019
TYR 2550.0018
ARG 2560.0020
ARG 2570.0019
LYS 2580.0021
LEU 2590.0020
THR 2600.0028
ASN 2610.0023
PRO 2620.0034
ALA 2630.0047
ASN 2640.0052
LYS 2650.0048
GLU 2660.0033
GLU 2670.0022
SER 2680.0014
ILE 2690.0009
LYS 2700.0014
LYS 2710.0021
GLN 2720.0028
LYS 2730.0030
TYR 2740.0032
SER 2750.0037
TYR 2760.0039
PRO 2770.0052
TRP 2780.0044
GLN 2790.0024
THR 2800.0034
SER 2810.0040
LYS 2820.0015
CYS 2830.0021
PHE 2840.0058
ASP 2880.0023
TYR 2890.0018
GLN 2900.0019
TYR 2910.0053
CYS 2970.0839
ASN 2980.0559
PRO 2990.0306
GLY 3000.0031
LYS 3010.0284
LYS 3020.0408
ASN 3030.0327
THR 3040.0179
ILE 3050.0201
SER 3060.0189
GLY 3070.0251
TYR 3080.0160
LYS 3090.0145
ARG 3100.0233
MET 3110.0193
MET 3120.0124
ALA 3130.0187
THR 3140.0186
LYS 3150.0114
ASP 3160.0126
SER 3170.0141
PHE 3180.0101
GLN 3190.0057
SER 3200.0024
PHE 3210.0054
ASN 3220.0053
LEU 3230.0054
THR 3240.0055
GLU 3250.0058
PRO 3260.0061
HIS 3270.0066
ILE 3280.0068
THR 3290.0074
THR 3300.0079
ASN 3310.0084
LYS 3320.0081
LEU 3330.0074
GLU 3340.0072
TRP 3350.0067
ILE 3360.0066
ASP 3370.0069
PRO 3380.0064
ASP 3390.0069
GLY 3400.0084
ASN 3410.0097
THR 3420.0129
ARG 3430.0268
GLY 3440.0446
GLY 3450.0621
GLY 3460.0787
GLY 10.0044
SER 20.0040
HIS 30.0035
SER 40.0030
MET 50.0028
ARG 60.0021
TYR 70.0019
PHE 80.0014
PHE 90.0015
THR 100.0016
SER 110.0019
VAL 120.0022
SER 130.0022
ARG 140.0029
PRO 150.0029
GLY 160.0032
ARG 170.0032
GLY 180.0030
GLU 190.0026
PRO 200.0025
ARG 210.0031
PHE 220.0026
ILE 230.0025
ALA 240.0023
VAL 250.0023
GLY 260.0026
TYR 270.0023
VAL 280.0028
ASP 290.0023
ASP 300.0016
THR 310.0022
GLN 320.0024
PHE 330.0032
VAL 340.0034
ARG 350.0033
PHE 360.0035
ASP 370.0036
SER 380.0039
ASP 390.0044
ALA 400.0048
ALA 410.0058
SER 420.0057
GLN 430.0052
ARG 440.0050
MET 450.0044
GLU 460.0045
PRO 470.0043
ARG 480.0037
ALA 490.0037
PRO 500.0044
TRP 510.0046
ILE 520.0047
GLU 530.0052
GLN 540.0059
GLU 550.0059
GLY 560.0067
PRO 570.0068
GLU 580.0067
TYR 590.0058
TRP 600.0056
ASP 610.0059
GLY 620.0054
GLU 630.0046
THR 640.0048
ARG 650.0048
LYS 660.0039
VAL 670.0034
LYS 680.0037
ALA 690.0033
HIS 700.0025
SER 710.0025
GLN 720.0024
THR 730.0016
HIS 740.0014
ARG 750.0019
VAL 760.0012
ASP 770.0008
LEU 780.0014
GLY 790.0015
THR 800.0011
LEU 810.0013
ARG 820.0018
GLY 830.0020
TYR 840.0019
TYR 850.0023
ASN 860.0032
GLN 870.0031
SER 880.0033
GLU 890.0032
ALA 900.0033
GLY 910.0030
SER 920.0025
HIS 930.0019
THR 940.0014
VAL 950.0009
GLN 960.0008
ARG 970.0009
MET 980.0012
TYR 990.0017
GLY 1000.0022
CYS 1010.0028
ASP 1020.0033
VAL 1030.0040
GLY 1040.0046
SER 1050.0051
ASP 1060.0057
TRP 1070.0050
ARG 1080.0050
PHE 1090.0042
LEU 1100.0040
ARG 1110.0031
GLY 1120.0026
TYR 1130.0020
HIS 1140.0015
GLN 1150.0011
TYR 1160.0007
ALA 1170.0006
TYR 1180.0008
ASP 1190.0011
GLY 1200.0008
LYS 1210.0008
ASP 1220.0009
TYR 1230.0010
ILE 1240.0011
ALA 1250.0012
LEU 1260.0016
LYS 1270.0020
GLU 1280.0023
ASP 1290.0026
LEU 1300.0023
ARG 1310.0024
SER 1320.0022
TRP 1330.0017
THR 1340.0017
ALA 1350.0016
ALA 1360.0015
ASP 1370.0016
MET 1380.0019
ALA 1390.0017
ALA 1400.0015
GLN 1410.0018
THR 1420.0016
THR 1430.0012
LYS 1440.0015
HIS 1450.0017
LYS 1460.0011
TRP 1470.0012
GLU 1480.0016
ALA 1490.0014
ALA 1500.0012
HIS 1510.0015
VAL 1520.0013
ALA 1530.0018
GLU 1540.0022
GLN 1550.0021
LEU 1560.0019
ARG 1570.0026
ALA 1580.0029
TYR 1590.0029
LEU 1600.0029
GLU 1610.0037
GLY 1620.0041
THR 1630.0039
CYS 1640.0036
VAL 1650.0042
GLU 1660.0050
TRP 1670.0046
LEU 1680.0041
ARG 1690.0049
ARG 1700.0052
TYR 1710.0045
LEU 1720.0045
GLU 1730.0053
ASN 1740.0052
GLY 1750.0044
LYS 1760.0046
GLU 1770.0041
THR 1780.0033
LEU 1790.0033
GLN 1800.0038
ARG 1810.0026
THR 1820.0023
ASP 1830.0015
ALA 1840.0022
PRO 1850.0023
LYS 1860.0031
THR 1870.0039
HIS 1880.0047
MET 1890.0053
THR 1900.0058
HIS 1910.0070
HIS 1920.0074
ALA 1930.0083
VAL 1940.0080
SER 1950.0091
ASP 1960.0105
HIS 1970.0095
GLU 1980.0081
ALA 1990.0076
THR 2000.0063
LEU 2010.0061
ARG 2020.0051
CYS 2030.0045
TRP 2040.0037
ALA 2050.0029
LEU 2060.0020
SER 2070.0013
PHE 2080.0013
TYR 2090.0013
PRO 2100.0016
ALA 2110.0010
GLU 2120.0016
ILE 2130.0022
THR 2140.0028
LEU 2150.0033
THR 2160.0037
TRP 2170.0045
GLN 2180.0050
ARG 2190.0057
ASP 2200.0064
GLY 2210.0057
GLU 2220.0047
ASP 2230.0038
GLN 2240.0036
THR 2250.0024
GLN 2260.0024
ASP 2270.0034
THR 2280.0035
GLU 2290.0036
LEU 2300.0034
VAL 2310.0030
GLU 2320.0022
THR 2330.0016
ARG 2340.0015
PRO 2350.0011
ALA 2360.0016
GLY 2370.0020
ASP 2380.0018
GLY 2390.0015
THR 2400.0008
PHE 2410.0010
GLN 2420.0018
LYS 2430.0024
TRP 2440.0033
ALA 2450.0039
ALA 2460.0047
VAL 2470.0050
VAL 2480.0059
VAL 2490.0066
PRO 2500.0076
SER 2510.0088
GLY 2520.0092
GLN 2530.0082
GLU 2540.0078
GLN 2550.0083
ARG 2560.0074
TYR 2570.0064
THR 2580.0061
CYS 2590.0051
HIS 2600.0046
VAL 2610.0038
GLN 2620.0036
HIS 2630.0028
GLU 2640.0030
GLY 2650.0026
LEU 2660.0036
PRO 2670.0045
LYS 2680.0051
PRO 2690.0049
LEU 2700.0049
THR 2710.0058
LEU 2720.0060
ARG 2730.0070
TRP 2740.0072
GLU 2750.0083
PRO 2760.0087
GLN 2780.0027
ARG 2790.0023
THR 2800.0028
PRO 2810.0025
LYS 2820.0026
ILE 2830.0034
GLN 2840.0032
VAL 2850.0036
TYR 2860.0033
SER 2870.0031
ARG 2880.0024
HIS 2890.0023
PRO 2900.0026
ALA 2910.0035
GLU 2920.0039
ASN 2930.0049
GLY 2940.0052
LYS 2950.0044
SER 2960.0045
ASN 2970.0038
PHE 2980.0036
LEU 2990.0038
ASN 3000.0032
CYS 3010.0033
TYR 3020.0025
VAL 3030.0024
SER 3040.0019
GLY 3050.0018
PHE 3060.0020
HIS 3070.0018
PRO 3080.0018
SER 3090.0019
ASP 3100.0026
ILE 3110.0030
GLU 3120.0036
VAL 3130.0041
ASP 3140.0049
LEU 3150.0050
LEU 3160.0060
LYS 3170.0066
ASN 3180.0074
GLY 3190.0073
GLU 3200.0074
ARG 3210.0067
ILE 3220.0063
GLU 3230.0064
LYS 3240.0059
VAL 3250.0049
GLU 3260.0042
HIS 3270.0033
SER 3280.0025
ASP 3290.0025
LEU 3300.0021
SER 3310.0013
PHE 3320.0008
SER 3330.0008
LYS 3340.0009
ASP 3350.0010
TRP 3360.0008
SER 3370.0012
PHE 3380.0013
TYR 3390.0015
LEU 3400.0021
LEU 3410.0024
TYR 3420.0032
TYR 3430.0037
THR 3440.0044
GLU 3450.0046
PHE 3460.0050
THR 3470.0051
PRO 3480.0051
THR 3490.0060
GLU 3500.0064
LYS 3510.0073
ASP 3520.0069
GLU 3530.0066
TYR 3540.0057
ALA 3550.0054
CYS 3560.0047
ARG 3570.0051
VAL 3580.0040
ASN 3590.0038
HIS 3600.0034
VAL 3610.0032
THR 3620.0033
LEU 3630.0036
SER 3640.0037
GLN 3650.0039
PRO 3660.0041
LYS 3670.0044
ILE 3680.0057
VAL 3690.0052
LYS 3700.0055
TRP 3710.0049
ASP 3720.0049
ARG 3730.0041
ASP 3740.0045
MET 3750.0047
SER 10.0011
GLN 20.0009
PHE 30.0004
ARG 40.0002
VAL 50.0006
SER 60.0013
PRO 70.0017
LEU 80.0017
ASP 90.0021
ARG 100.0028
THR 110.0036
TRP 120.0040
ASN 130.0046
LEU 140.0051
GLY 150.0052
GLU 160.0047
THR 170.0042
VAL 180.0035
GLU 190.0030
LEU 200.0024
LYS 210.0015
CYS 220.0009
GLN 230.0009
VAL 240.0009
LEU 250.0012
LEU 260.0018
SER 270.0021
ASN 280.0024
PRO 290.0022
THR 300.0025
SER 310.0018
GLY 320.0018
CYS 330.0013
SER 340.0013
TRP 350.0020
LEU 360.0024
PHE 370.0033
GLN 380.0038
PRO 390.0047
ARG 400.0051
GLY 410.0072
ALA 420.0080
ALA 430.0077
ALA 440.0066
SER 450.0057
PRO 460.0037
THR 470.0037
PHE 480.0031
LEU 490.0034
LEU 500.0030
TYR 510.0021
LEU 520.0024
SER 530.0026
GLN 540.0033
ASN 550.0036
LYS 560.0042
PRO 570.0037
LYS 580.0035
ALA 590.0038
ALA 600.0038
GLU 610.0050
GLY 620.0055
LEU 630.0050
ASP 640.0053
THR 650.0050
GLN 660.0054
ARG 670.0049
PHE 680.0041
SER 690.0038
GLY 700.0032
LYS 710.0029
ARG 720.0025
LEU 730.0027
GLY 740.0026
ASP 750.0018
THR 760.0018
PHE 770.0019
VAL 780.0024
LEU 790.0027
THR 800.0035
LEU 810.0040
SER 820.0046
ASP 830.0050
PHE 840.0047
ARG 850.0051
ARG 860.0045
GLU 870.0048
ASN 880.0045
GLU 890.0043
GLY 900.0042
TYR 910.0032
TYR 920.0026
PHE 930.0017
CYS 940.0010
SER 950.0004
ALA 960.0008
LEU 970.0016
SER 980.0025
ASN 990.0033
SER 1000.0028
ILE 1010.0027
MET 1020.0016
TYR 1030.0014
PHE 1040.0012
SER 1050.0009
HIS 1060.0013
PHE 1070.0019
VAL 1080.0021
PRO 1090.0029
VAL 1100.0034
PHE 1110.0041
LEU 1120.0044
PRO 1130.0047
ALA 1140.0048
SER 10.0066
GLN 20.0055
PHE 30.0054
ARG 40.0067
VAL 50.0071
SER 60.0087
PRO 70.0101
LEU 80.0108
ASP 90.0127
ARG 100.0129
THR 110.0134
TRP 120.0135
ASN 130.0149
LEU 140.0152
GLY 150.0150
GLU 160.0139
THR 170.0122
VAL 180.0108
GLU 190.0093
LEU 200.0080
LYS 210.0066
CYS 220.0054
GLN 230.0048
VAL 240.0036
LEU 250.0047
LEU 260.0040
SER 270.0047
ASN 280.0035
PRO 290.0020
THR 300.0009
SER 310.0011
GLY 320.0012
CYS 330.0019
SER 340.0026
TRP 350.0042
LEU 360.0043
PHE 370.0057
GLN 380.0059
PRO 390.0074
ARG 400.0085
GLY 410.0066
ALA 420.0054
ALA 430.0035
ALA 440.0041
SER 450.0030
PRO 460.0038
THR 470.0042
PHE 480.0037
LEU 490.0049
LEU 500.0044
TYR 510.0033
LEU 520.0032
SER 530.0026
GLN 540.0035
ASN 550.0049
LYS 560.0057
PRO 570.0051
LYS 580.0050
ALA 590.0056
ALA 600.0052
GLU 610.0062
GLY 620.0079
LEU 630.0079
ASP 640.0100
THR 650.0097
GLN 660.0113
ARG 670.0109
PHE 680.0090
SER 690.0079
GLY 700.0062
LYS 710.0053
ARG 720.0038
LEU 730.0040
GLY 740.0025
ASP 750.0027
THR 760.0041
PHE 770.0043
VAL 780.0060
LEU 790.0068
THR 800.0086
LEU 810.0100
SER 820.0117
ASP 830.0132
PHE 840.0126
ARG 850.0132
ARG 860.0132
GLU 870.0116
ASN 880.0104
GLU 890.0107
GLY 900.0092
TYR 910.0076
TYR 920.0067
PHE 930.0054
CYS 940.0040
SER 950.0024
ALA 960.0014
LEU 970.0013
SER 980.0021
ASN 990.0029
SER 1000.0025
ILE 1010.0029
MET 1020.0022
TYR 1030.0031
PHE 1040.0038
SER 1050.0049
HIS 1060.0069
PHE 1070.0074
VAL 1080.0084
PRO 1090.0097
VAL 1100.0103
PHE 1110.0121
LEU 1120.0141
PRO 1130.0157
ALA 1140.0164

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.