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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1558
MET 10.0702
SER 20.0539
THR 30.0457
ILE 40.0320
THR 50.0212
LYS 60.0134
ASP 70.0123
GLN 80.0147
ILE 90.0196
LEU 100.0195
GLU 110.0201
GLY 120.0202
VAL 130.0206
ALA 140.0219
ALA 150.0231
LEU 160.0165
SER 170.0108
VAL 180.0116
MET 190.0081
GLU 200.0064
ILE 210.0031
VAL 220.0128
GLU 230.0166
LEU 240.0124
ILE 250.0116
SER 260.0243
ALA 270.0274
MET 280.0204
GLU 290.0234
GLU 300.0358
LYS 310.0361
PHE 320.0294
GLY 330.0305
VAL 340.0191
SER 350.0185
ALA 360.0164
ALA 370.0184
ALA 380.0105
VAL 390.0113
ALA 400.0191
ALA 410.0188
GLY 420.0201
PRO 430.0199
ALA 440.0231
ALA 450.0150
ALA 460.0106
VAL 470.0132
GLU 480.0099
ALA 490.0037
ALA 500.0054
GLU 510.0053
GLU 520.0050
GLN 530.0043
THR 540.0050
GLU 550.0043
PHE 560.0040
ASP 570.0037
VAL 580.0040
VAL 590.0040
LEU 600.0045
ALA 610.0049
SER 620.0056
PHE 630.0059
GLY 640.0072
GLU 650.0081
ASN 660.0077
LYS 670.0066
VAL 680.0068
ALA 690.0073
VAL 700.0063
ILE 710.0056
LYS 720.0065
ALA 730.0065
VAL 740.0054
ARG 750.0057
GLY 760.0066
ALA 770.0060
THR 780.0054
GLY 790.0061
LEU 800.0052
GLY 810.0051
LEU 820.0050
LYS 830.0042
GLU 840.0041
ALA 850.0044
LYS 860.0044
ASP 870.0039
LEU 880.0039
VAL 890.0044
GLU 900.0046
SER 910.0041
ALA 920.0042
PRO 930.0040
ALA 940.0038
VAL 950.0037
LEU 960.0038
LYS 970.0040
GLU 980.0040
GLY 990.0045
VAL 1000.0049
ASN 1010.0056
LYS 1020.0057
ASP 1030.0067
GLU 1040.0062
ALA 1050.0054
GLU 1060.0063
THR 1070.0069
LEU 1080.0060
LYS 1090.0061
LYS 1100.0073
SER 1110.0072
LEU 1120.0064
GLU 1130.0072
GLU 1140.0081
ALA 1150.0075
GLY 1160.0075
ALA 1170.0064
SER 1180.0062
VAL 1190.0054
GLU 1200.0049
ILE 1210.0045
LYS 1220.0039
GLU 1230.0036
ALA 1240.0033
ALA 1250.0033
ALA 1260.0025
LYS 1270.0025
ALA 1280.0025
TYR 1290.0024
LYS 1300.0024
ILE 1310.0021
ILE 1320.0027
SER 1330.0025
LEU 1340.0029
LYS 1350.0029
TYR 1360.0030
THR 1370.0038
ARG 1380.0050
LYS 1390.0059
VAL 1400.0070
CYS 1410.0093
ILE 1420.0109
GLY 1430.0134
PRO 1440.0148
GLY 1450.0177
PRO 1460.0185
GLY 1470.0163
LYS 1480.0134
ALA 1490.0097
TYR 1500.0083
LYS 1510.0063
ILE 1520.0045
ILE 1530.0045
SER 1540.0024
LEU 1550.0032
LYS 1560.0018
TYR 1570.0025
THR 1580.0020
ARG 1590.0024
LYS 1600.0025
VAL 1610.0025
CYS 1620.0030
GLY 1630.0024
PRO 1640.0038
GLY 1650.0049
PRO 1660.0055
GLY 1670.0064
GLY 1680.0055
LYS 1690.0064
ALA 1700.0053
TYR 1710.0059
LYS 1720.0055
ILE 1730.0054
ILE 1740.0053
SER 1750.0053
LEU 1760.0056
LYS 1770.0048
TYR 1780.0048
THR 1790.0034
ARG 1800.0037
LYS 1810.0018
VAL 1820.0034
GLY 1830.0039
PRO 1840.0069
GLY 1850.0090
PRO 1860.0099
GLY 1870.0078
ILE 1880.0069
ILE 1890.0055
SER 1900.0036
LEU 1910.0030
LYS 1920.0019
TYR 1930.0021
THR 1940.0011
ARG 1950.0013
LYS 1960.0009
VAL 1970.0016
CYS 1980.0015
ILE 1990.0025
GLN 2000.0025
LEU 2010.0025
GLY 2020.0026
GLY 2030.0025
PRO 2040.0021
GLY 2050.0020
PRO 2060.0017
GLY 2070.0019
ASN 2080.0021
ILE 2090.0016
LYS 2100.0016
THR 2110.0024
ALA 2120.0024
PHE 2130.0020
HIS 2140.0024
CYS 2150.0029
TYR 2160.0028
ALA 2170.0028
ALA 2180.0035
TYR 2190.0036
MET 2200.0033
THR 2210.0039
SER 2220.0040
ILE 2230.0044
LYS 2240.0046
ALA 2250.0051
CYS 2260.0108
ASP 2270.0068
LEU 2280.0044
LYS 2290.0041
LYS 2300.0064
PRO 2310.0051
LEU 2320.0061
MET 2330.0051
GLU 2340.0066
SER 2350.0076
GLY 2360.0043
TRP 2370.0038
SER 2380.0049
ASP 2390.0046
THR 2400.0059
ALA 2410.0037
HIS 2420.0069
GLY 2430.0030
LYS 2440.0047
LYS 2450.0009
SER 2460.0047
LEU 2470.0057
PRO 2480.0087
SER 2490.0108
SER 2500.0104
SER 2510.0051
SER 2520.0034
TYR 2530.0032
SER 2540.0020
TYR 2550.0019
ARG 2560.0019
ARG 2570.0019
LYS 2580.0022
LEU 2590.0022
THR 2600.0029
ASN 2610.0025
PRO 2620.0036
ALA 2630.0046
ASN 2640.0050
LYS 2650.0045
GLU 2660.0031
GLU 2670.0021
SER 2680.0014
ILE 2690.0011
LYS 2700.0016
LYS 2710.0019
GLN 2720.0025
LYS 2730.0025
TYR 2740.0025
SER 2750.0028
TYR 2760.0029
PRO 2770.0040
TRP 2780.0036
GLN 2790.0017
THR 2800.0024
SER 2810.0031
LYS 2820.0015
CYS 2830.0017
PHE 2840.0045
ASP 2880.0017
TYR 2890.0015
GLN 2900.0012
TYR 2910.0040
CYS 2970.1558
ASN 2980.1038
PRO 2990.0585
GLY 3000.0094
LYS 3010.0508
LYS 3020.0757
ASN 3030.0612
THR 3040.0347
ILE 3050.0388
SER 3060.0358
GLY 3070.0457
TYR 3080.0293
LYS 3090.0291
ARG 3100.0441
MET 3110.0362
MET 3120.0256
ALA 3130.0375
THR 3140.0361
LYS 3150.0231
ASP 3160.0257
SER 3170.0263
PHE 3180.0179
GLN 3190.0095
SER 3200.0031
PHE 3210.0086
ASN 3220.0076
LEU 3230.0087
THR 3240.0085
GLU 3250.0094
PRO 3260.0110
HIS 3270.0144
ILE 3280.0167
THR 3290.0203
THR 3300.0233
ASN 3310.0247
LYS 3320.0220
LEU 3330.0188
GLU 3340.0174
TRP 3350.0147
ILE 3360.0142
ASP 3370.0156
PRO 3380.0133
ASP 3390.0148
GLY 3400.0204
ASN 3410.0193
THR 3420.0281
ARG 3430.0422
GLY 3440.0582
GLY 3450.0669
GLY 3460.0872
GLY 10.0017
SER 20.0015
HIS 30.0014
SER 40.0012
MET 50.0012
ARG 60.0010
TYR 70.0011
PHE 80.0009
PHE 90.0012
THR 100.0012
SER 110.0016
VAL 120.0018
SER 130.0022
ARG 140.0025
PRO 150.0029
GLY 160.0032
ARG 170.0030
GLY 180.0029
GLU 190.0027
PRO 200.0023
ARG 210.0020
PHE 220.0018
ILE 230.0015
ALA 240.0014
VAL 250.0012
GLY 260.0012
TYR 270.0011
VAL 280.0013
ASP 290.0011
ASP 300.0009
THR 310.0012
GLN 320.0012
PHE 330.0016
VAL 340.0017
ARG 350.0016
PHE 360.0019
ASP 370.0019
SER 380.0022
ASP 390.0023
ALA 400.0023
ALA 410.0027
SER 420.0027
GLN 430.0027
ARG 440.0025
MET 450.0022
GLU 460.0021
PRO 470.0020
ARG 480.0017
ALA 490.0018
PRO 500.0021
TRP 510.0022
ILE 520.0022
GLU 530.0024
GLN 540.0027
GLU 550.0027
GLY 560.0031
PRO 570.0031
GLU 580.0031
TYR 590.0028
TRP 600.0027
ASP 610.0029
GLY 620.0027
GLU 630.0024
THR 640.0025
ARG 650.0027
LYS 660.0023
VAL 670.0021
LYS 680.0024
ALA 690.0023
HIS 700.0019
SER 710.0020
GLN 720.0023
THR 730.0021
HIS 740.0018
ARG 750.0022
VAL 760.0023
ASP 770.0019
LEU 780.0020
GLY 790.0023
THR 800.0021
LEU 810.0018
ARG 820.0021
GLY 830.0023
TYR 840.0019
TYR 850.0020
ASN 860.0023
GLN 870.0024
SER 880.0027
GLU 890.0028
ALA 900.0028
GLY 910.0027
SER 920.0023
HIS 930.0019
THR 940.0015
VAL 950.0013
GLN 960.0010
ARG 970.0009
MET 980.0007
TYR 990.0009
GLY 1000.0011
CYS 1010.0012
ASP 1020.0013
VAL 1030.0016
GLY 1040.0018
SER 1050.0021
ASP 1060.0023
TRP 1070.0021
ARG 1080.0021
PHE 1090.0018
LEU 1100.0015
ARG 1110.0012
GLY 1120.0010
TYR 1130.0007
HIS 1140.0007
GLN 1150.0005
TYR 1160.0007
ALA 1170.0008
TYR 1180.0012
ASP 1190.0014
GLY 1200.0012
LYS 1210.0011
ASP 1220.0007
TYR 1230.0008
ILE 1240.0005
ALA 1250.0004
LEU 1260.0005
LYS 1270.0005
GLU 1280.0007
ASP 1290.0009
LEU 1300.0009
ARG 1310.0009
SER 1320.0007
TRP 1330.0005
THR 1340.0005
ALA 1350.0006
ALA 1360.0008
ASP 1370.0008
MET 1380.0009
ALA 1390.0011
ALA 1400.0008
GLN 1410.0007
THR 1420.0010
THR 1430.0010
LYS 1440.0008
HIS 1450.0009
LYS 1460.0012
TRP 1470.0011
GLU 1480.0011
ALA 1490.0014
ALA 1500.0016
HIS 1510.0014
VAL 1520.0013
ALA 1530.0011
GLU 1540.0014
GLN 1550.0016
LEU 1560.0013
ARG 1570.0014
ALA 1580.0017
TYR 1590.0017
LEU 1600.0014
GLU 1610.0017
GLY 1620.0020
THR 1630.0020
CYS 1640.0017
VAL 1650.0018
GLU 1660.0022
TRP 1670.0021
LEU 1680.0019
ARG 1690.0022
ARG 1700.0023
TYR 1710.0021
LEU 1720.0020
GLU 1730.0024
ASN 1740.0024
GLY 1750.0021
LYS 1760.0021
GLU 1770.0020
THR 1780.0017
LEU 1790.0016
GLN 1800.0018
ARG 1810.0013
THR 1820.0012
ASP 1830.0012
ALA 1840.0012
PRO 1850.0011
LYS 1860.0009
THR 1870.0009
HIS 1880.0010
MET 1890.0010
THR 1900.0010
HIS 1910.0009
HIS 1920.0013
ALA 1930.0015
VAL 1940.0018
SER 1950.0020
ASP 1960.0020
HIS 1970.0020
GLU 1980.0018
ALA 1990.0015
THR 2000.0013
LEU 2010.0011
ARG 2020.0010
CYS 2030.0009
TRP 2040.0009
ALA 2050.0008
LEU 2060.0010
SER 2070.0011
PHE 2080.0010
TYR 2090.0010
PRO 2100.0009
ALA 2110.0007
GLU 2120.0007
ILE 2130.0007
THR 2140.0007
LEU 2150.0008
THR 2160.0007
TRP 2170.0008
GLN 2180.0008
ARG 2190.0010
ASP 2200.0011
GLY 2210.0011
GLU 2220.0010
ASP 2230.0008
GLN 2240.0008
THR 2250.0007
GLN 2260.0008
ASP 2270.0010
THR 2280.0008
GLU 2290.0009
LEU 2300.0008
VAL 2310.0007
GLU 2320.0006
THR 2330.0007
ARG 2340.0007
PRO 2350.0007
ALA 2360.0009
GLY 2370.0010
ASP 2380.0012
GLY 2390.0011
THR 2400.0010
PHE 2410.0008
GLN 2420.0008
LYS 2430.0008
TRP 2440.0008
ALA 2450.0008
ALA 2460.0011
VAL 2470.0011
VAL 2480.0014
VAL 2490.0014
PRO 2500.0016
SER 2510.0016
GLY 2520.0016
GLN 2530.0014
GLU 2540.0013
GLN 2550.0012
ARG 2560.0012
TYR 2570.0011
THR 2580.0009
CYS 2590.0008
HIS 2600.0007
VAL 2610.0009
GLN 2620.0009
HIS 2630.0008
GLU 2640.0008
GLY 2650.0010
LEU 2660.0008
PRO 2670.0009
LYS 2680.0009
PRO 2690.0008
LEU 2700.0009
THR 2710.0007
LEU 2720.0008
ARG 2730.0008
TRP 2740.0009
GLU 2750.0009
PRO 2760.0008
GLN 2780.0020
ARG 2790.0015
THR 2800.0016
PRO 2810.0012
LYS 2820.0011
ILE 2830.0007
GLN 2840.0005
VAL 2850.0003
TYR 2860.0006
SER 2870.0008
ARG 2880.0011
HIS 2890.0014
PRO 2900.0016
ALA 2910.0015
GLU 2920.0018
ASN 2930.0016
GLY 2940.0017
LYS 2950.0019
SER 2960.0017
ASN 2970.0014
PHE 2980.0010
LEU 2990.0006
ASN 3000.0004
CYS 3010.0001
TYR 3020.0001
VAL 3030.0005
SER 3040.0005
GLY 3050.0008
PHE 3060.0011
HIS 3070.0013
PRO 3080.0016
SER 3090.0014
ASP 3100.0018
ILE 3110.0017
GLU 3120.0018
VAL 3130.0013
ASP 3140.0012
LEU 3150.0007
LEU 3160.0007
LYS 3170.0005
ASN 3180.0006
GLY 3190.0011
GLU 3200.0012
ARG 3210.0014
ILE 3220.0012
GLU 3230.0017
LYS 3240.0018
VAL 3250.0014
GLU 3260.0015
HIS 3270.0012
SER 3280.0010
ASP 3290.0012
LEU 3300.0010
SER 3310.0007
PHE 3320.0005
SER 3330.0004
LYS 3340.0005
ASP 3350.0007
TRP 3360.0006
SER 3370.0007
PHE 3380.0007
TYR 3390.0004
LEU 3400.0006
LEU 3410.0005
TYR 3420.0007
TYR 3430.0008
THR 3440.0011
GLU 3450.0013
PHE 3460.0011
THR 3470.0012
PRO 3480.0010
THR 3490.0011
GLU 3500.0012
LYS 3510.0008
ASP 3520.0004
GLU 3530.0005
TYR 3540.0003
ALA 3550.0006
CYS 3560.0008
ARG 3570.0013
VAL 3580.0017
ASN 3590.0022
HIS 3600.0022
VAL 3610.0026
THR 3620.0025
LEU 3630.0029
SER 3640.0036
GLN 3650.0034
PRO 3660.0029
LYS 3670.0026
ILE 3680.0015
VAL 3690.0012
LYS 3700.0009
TRP 3710.0007
ASP 3720.0012
ARG 3730.0012
ASP 3740.0015
MET 3750.0013
SER 10.0016
GLN 20.0013
PHE 30.0014
ARG 40.0016
VAL 50.0019
SER 60.0024
PRO 70.0029
LEU 80.0032
ASP 90.0039
ARG 100.0040
THR 110.0044
TRP 120.0046
ASN 130.0055
LEU 140.0058
GLY 150.0058
GLU 160.0050
THR 170.0043
VAL 180.0036
GLU 190.0031
LEU 200.0024
LYS 210.0020
CYS 220.0017
GLN 230.0014
VAL 240.0011
LEU 250.0011
LEU 260.0010
SER 270.0010
ASN 280.0007
PRO 290.0006
THR 300.0005
SER 310.0006
GLY 320.0008
CYS 330.0010
SER 340.0010
TRP 350.0014
LEU 360.0012
PHE 370.0016
GLN 380.0017
PRO 390.0021
ARG 400.0026
GLY 410.0030
ALA 420.0026
ALA 430.0018
ALA 440.0016
SER 450.0009
PRO 460.0009
THR 470.0011
PHE 480.0012
LEU 490.0017
LEU 500.0017
TYR 510.0014
LEU 520.0014
SER 530.0012
GLN 540.0013
ASN 550.0017
LYS 560.0023
PRO 570.0021
LYS 580.0021
ALA 590.0023
ALA 600.0022
GLU 610.0027
GLY 620.0031
LEU 630.0030
ASP 640.0037
THR 650.0037
GLN 660.0043
ARG 670.0040
PHE 680.0033
SER 690.0030
GLY 700.0024
LYS 710.0020
ARG 720.0016
LEU 730.0016
GLY 740.0012
ASP 750.0011
THR 760.0015
PHE 770.0016
VAL 780.0021
LEU 790.0024
THR 800.0029
LEU 810.0035
SER 820.0043
ASP 830.0048
PHE 840.0043
ARG 850.0044
ARG 860.0040
GLU 870.0035
ASN 880.0030
GLU 890.0030
GLY 900.0026
TYR 910.0024
TYR 920.0021
PHE 930.0017
CYS 940.0013
SER 950.0008
ALA 960.0007
LEU 970.0005
SER 980.0007
ASN 990.0009
SER 1000.0010
ILE 1010.0010
MET 1020.0008
TYR 1030.0011
PHE 1040.0013
SER 1050.0017
HIS 1060.0021
PHE 1070.0023
VAL 1080.0026
PRO 1090.0029
VAL 1100.0030
PHE 1110.0038
LEU 1120.0049
PRO 1130.0059
ALA 1140.0059
SER 10.0012
GLN 20.0017
PHE 30.0016
ARG 40.0018
VAL 50.0018
SER 60.0024
PRO 70.0026
LEU 80.0020
ASP 90.0024
ARG 100.0030
THR 110.0035
TRP 120.0041
ASN 130.0049
LEU 140.0054
GLY 150.0057
GLU 160.0052
THR 170.0048
VAL 180.0040
GLU 190.0037
LEU 200.0029
LYS 210.0027
CYS 220.0022
GLN 230.0024
VAL 240.0022
LEU 250.0025
LEU 260.0023
SER 270.0028
ASN 280.0028
PRO 290.0025
THR 300.0026
SER 310.0020
GLY 320.0019
CYS 330.0017
SER 340.0014
TRP 350.0017
LEU 360.0015
PHE 370.0019
GLN 380.0021
PRO 390.0028
ARG 400.0029
GLY 410.0031
ALA 420.0032
ALA 430.0030
ALA 440.0026
SER 450.0021
PRO 460.0016
THR 470.0018
PHE 480.0016
LEU 490.0021
LEU 500.0021
TYR 510.0018
LEU 520.0022
SER 530.0022
GLN 540.0026
ASN 550.0026
LYS 560.0028
PRO 570.0025
LYS 580.0021
ALA 590.0023
ALA 600.0021
GLU 610.0023
GLY 620.0033
LEU 630.0033
ASP 640.0042
THR 650.0041
GLN 660.0050
ARG 670.0047
PHE 680.0039
SER 690.0038
GLY 700.0035
LYS 710.0035
ARG 720.0034
LEU 730.0039
GLY 740.0038
ASP 750.0032
THR 760.0030
PHE 770.0028
VAL 780.0031
LEU 790.0031
THR 800.0038
LEU 810.0041
SER 820.0049
ASP 830.0053
PHE 840.0047
ARG 850.0050
ARG 860.0049
GLU 870.0045
ASN 880.0039
GLU 890.0036
GLY 900.0028
TYR 910.0020
TYR 920.0018
PHE 930.0012
CYS 940.0012
SER 950.0008
ALA 960.0012
LEU 970.0012
SER 980.0017
ASN 990.0019
SER 1000.0014
ILE 1010.0014
MET 1020.0009
TYR 1030.0008
PHE 1040.0005
SER 1050.0007
HIS 1060.0005
PHE 1070.0011
VAL 1080.0017
PRO 1090.0021
VAL 1100.0028
PHE 1110.0034
LEU 1120.0041
PRO 1130.0041
ALA 1140.0042

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.