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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1698
MET 10.0097
SER 20.0064
THR 30.0067
ILE 40.0052
THR 50.0073
LYS 60.0083
ASP 70.0094
GLN 80.0071
ILE 90.0057
LEU 100.0082
GLU 110.0087
GLY 120.0065
VAL 130.0059
ALA 140.0075
ALA 150.0067
LEU 160.0040
SER 170.0037
VAL 180.0046
MET 190.0039
GLU 200.0029
ILE 210.0035
VAL 220.0039
GLU 230.0034
LEU 240.0028
ILE 250.0031
SER 260.0039
ALA 270.0041
MET 280.0025
GLU 290.0037
GLU 300.0052
LYS 310.0045
PHE 320.0042
GLY 330.0065
VAL 340.0062
SER 350.0060
ALA 360.0078
ALA 370.0096
ALA 380.0104
VAL 390.0106
ALA 400.0123
ALA 410.0123
GLY 420.0124
PRO 430.0125
ALA 440.0124
ALA 450.0123
ALA 460.0121
VAL 470.0123
GLU 480.0139
ALA 490.0144
ALA 500.0139
GLU 510.0143
GLU 520.0130
GLN 530.0129
THR 540.0127
GLU 550.0126
PHE 560.0113
ASP 570.0112
VAL 580.0099
VAL 590.0105
LEU 600.0103
ALA 610.0122
SER 620.0132
PHE 630.0135
GLY 640.0177
GLU 650.0208
ASN 660.0200
LYS 670.0166
VAL 680.0187
ALA 690.0193
VAL 700.0153
ILE 710.0149
LYS 720.0181
ALA 730.0162
VAL 740.0135
ARG 750.0166
GLY 760.0181
ALA 770.0149
THR 780.0153
GLY 790.0192
LEU 800.0181
GLY 810.0199
LEU 820.0185
LYS 830.0163
GLU 840.0150
ALA 850.0135
LYS 860.0123
ASP 870.0106
LEU 880.0102
VAL 890.0099
GLU 900.0098
SER 910.0093
ALA 920.0095
PRO 930.0105
ALA 940.0102
VAL 950.0110
LEU 960.0101
LYS 970.0110
GLU 980.0126
GLY 990.0132
VAL 1000.0114
ASN 1010.0114
LYS 1020.0103
ASP 1030.0108
GLU 1040.0113
ALA 1050.0102
GLU 1060.0108
THR 1070.0125
LEU 1080.0117
LYS 1090.0117
LYS 1100.0142
SER 1110.0153
LEU 1120.0138
GLU 1130.0157
GLU 1140.0187
ALA 1150.0180
GLY 1160.0180
ALA 1170.0145
SER 1180.0144
VAL 1190.0120
GLU 1200.0125
ILE 1210.0118
LYS 1220.0124
GLU 1230.0125
ALA 1240.0127
ALA 1250.0143
ALA 1260.0131
LYS 1270.0129
ALA 1280.0127
TYR 1290.0128
LYS 1300.0125
ILE 1310.0129
ILE 1320.0145
SER 1330.0138
LEU 1340.0147
LYS 1350.0146
TYR 1360.0157
THR 1370.0161
ARG 1380.0180
LYS 1390.0191
VAL 1400.0207
CYS 1410.0273
ILE 1420.0297
GLY 1430.0361
PRO 1440.0375
GLY 1450.0447
PRO 1460.0435
GLY 1470.0329
LYS 1480.0258
ALA 1490.0152
TYR 1500.0151
LYS 1510.0142
ILE 1520.0084
ILE 1530.0119
SER 1540.0071
LEU 1550.0100
LYS 1560.0076
TYR 1570.0079
THR 1580.0058
ARG 1590.0063
LYS 1600.0051
VAL 1610.0053
CYS 1620.0042
GLY 1630.0070
PRO 1640.0068
GLY 1650.0041
PRO 1660.0035
GLY 1670.0079
GLY 1680.0115
LYS 1690.0127
ALA 1700.0112
TYR 1710.0113
LYS 1720.0126
ILE 1730.0129
ILE 1740.0149
SER 1750.0165
LEU 1760.0190
LYS 1770.0192
TYR 1780.0199
THR 1790.0187
ARG 1800.0192
LYS 1810.0155
VAL 1820.0137
GLY 1830.0086
PRO 1840.0078
GLY 1850.0168
PRO 1860.0222
GLY 1870.0165
ILE 1880.0175
ILE 1890.0136
SER 1900.0116
LEU 1910.0102
LYS 1920.0089
TYR 1930.0096
THR 1940.0090
ARG 1950.0096
LYS 1960.0096
VAL 1970.0110
CYS 1980.0108
ILE 1990.0135
GLN 2000.0133
LEU 2010.0124
GLY 2020.0118
GLY 2030.0105
PRO 2040.0088
GLY 2050.0080
PRO 2060.0064
GLY 2070.0073
ASN 2080.0079
ILE 2090.0066
LYS 2100.0066
THR 2110.0074
ALA 2120.0072
PHE 2130.0065
HIS 2140.0073
CYS 2150.0080
TYR 2160.0069
ALA 2170.0069
ALA 2180.0086
TYR 2190.0081
MET 2200.0067
THR 2210.0077
SER 2220.0083
ILE 2230.0074
LYS 2240.0082
ALA 2250.0076
CYS 2260.0056
ASP 2270.0037
LEU 2280.0041
LYS 2290.0045
LYS 2300.0076
PRO 2310.0064
LEU 2320.0067
MET 2330.0057
GLU 2340.0064
SER 2350.0071
GLY 2360.0044
TRP 2370.0039
SER 2380.0043
ASP 2390.0041
THR 2400.0050
ALA 2410.0028
HIS 2420.0054
GLY 2430.0022
LYS 2440.0045
LYS 2450.0009
SER 2460.0039
LEU 2470.0050
PRO 2480.0080
SER 2490.0100
SER 2500.0097
SER 2510.0043
SER 2520.0029
TYR 2530.0029
SER 2540.0020
TYR 2550.0020
ARG 2560.0021
ARG 2570.0019
LYS 2580.0021
LEU 2590.0018
THR 2600.0023
ASN 2610.0026
PRO 2620.0031
ALA 2630.0049
ASN 2640.0053
LYS 2650.0054
GLU 2660.0040
GLU 2670.0032
SER 2680.0022
ILE 2690.0011
LYS 2700.0007
LYS 2710.0008
GLN 2720.0013
LYS 2730.0017
TYR 2740.0021
SER 2750.0028
TYR 2760.0034
PRO 2770.0047
TRP 2780.0043
GLN 2790.0025
THR 2800.0034
SER 2810.0044
LYS 2820.0012
CYS 2830.0020
PHE 2840.0053
ASP 2880.0013
TYR 2890.0010
GLN 2900.0012
TYR 2910.0013
CYS 2970.0218
ASN 2980.0180
PRO 2990.0169
GLY 3000.0160
LYS 3010.0166
LYS 3020.0170
ASN 3030.0154
THR 3040.0144
ILE 3050.0144
SER 3060.0152
GLY 3070.0149
TYR 3080.0149
LYS 3090.0142
ARG 3100.0140
MET 3110.0141
MET 3120.0142
ALA 3130.0147
THR 3140.0138
LYS 3150.0138
ASP 3160.0148
SER 3170.0142
PHE 3180.0116
GLN 3190.0123
SER 3200.0107
PHE 3210.0106
ASN 3220.0108
LEU 3230.0109
THR 3240.0108
GLU 3250.0126
PRO 3260.0148
HIS 3270.0224
ILE 3280.0262
THR 3290.0330
THR 3300.0377
ASN 3310.0373
LYS 3320.0322
LEU 3330.0256
GLU 3340.0227
TRP 3350.0169
ILE 3360.0151
ASP 3370.0155
PRO 3380.0164
ASP 3390.0200
GLY 3400.0247
ASN 3410.0246
THR 3420.0327
ARG 3430.0603
GLY 3440.0985
GLY 3450.1246
GLY 3460.1698
GLY 10.0043
SER 20.0034
HIS 30.0026
SER 40.0016
MET 50.0014
ARG 60.0010
TYR 70.0020
PHE 80.0026
PHE 90.0038
THR 100.0046
SER 110.0061
VAL 120.0069
SER 130.0084
ARG 140.0093
PRO 150.0108
GLY 160.0116
ARG 170.0109
GLY 180.0105
GLU 190.0097
PRO 200.0083
ARG 210.0073
PHE 220.0063
ILE 230.0053
ALA 240.0044
VAL 250.0035
GLY 260.0027
TYR 270.0020
VAL 280.0022
ASP 290.0018
ASP 300.0016
THR 310.0029
GLN 320.0031
PHE 330.0040
VAL 340.0044
ARG 350.0048
PHE 360.0058
ASP 370.0065
SER 380.0076
ASP 390.0082
ALA 400.0082
ALA 410.0094
SER 420.0089
GLN 430.0085
ARG 440.0076
MET 450.0064
GLU 460.0063
PRO 470.0059
ARG 480.0053
ALA 490.0053
PRO 500.0064
TRP 510.0062
ILE 520.0059
GLU 530.0071
GLN 540.0077
GLU 550.0070
GLY 560.0079
PRO 570.0083
GLU 580.0076
TYR 590.0065
TRP 600.0069
ASP 610.0075
GLY 620.0064
GLU 630.0058
THR 640.0068
ARG 650.0068
LYS 660.0057
VAL 670.0057
LYS 680.0069
ALA 690.0064
HIS 700.0055
SER 710.0065
GLN 720.0074
THR 730.0067
HIS 740.0064
ARG 750.0076
VAL 760.0081
ASP 770.0073
LEU 780.0079
GLY 790.0089
THR 800.0085
LEU 810.0079
ARG 820.0095
GLY 830.0103
TYR 840.0091
TYR 850.0100
ASN 860.0118
GLN 870.0117
SER 880.0129
GLU 890.0128
ALA 900.0128
GLY 910.0105
SER 920.0091
HIS 930.0080
THR 940.0065
VAL 950.0056
GLN 960.0042
ARG 970.0033
MET 980.0021
TYR 990.0013
GLY 1000.0002
CYS 1010.0009
ASP 1020.0019
VAL 1030.0030
GLY 1040.0041
SER 1050.0049
ASP 1060.0054
TRP 1070.0043
ARG 1080.0040
PHE 1090.0030
LEU 1100.0032
ARG 1110.0023
GLY 1120.0015
TYR 1130.0016
HIS 1140.0020
GLN 1150.0027
TYR 1160.0036
ALA 1170.0047
TYR 1180.0060
ASP 1190.0065
GLY 1200.0056
LYS 1210.0056
ASP 1220.0050
TYR 1230.0051
ILE 1240.0043
ALA 1250.0033
LEU 1260.0030
LYS 1270.0035
GLU 1280.0032
ASP 1290.0034
LEU 1300.0026
ARG 1310.0029
SER 1320.0036
TRP 1330.0039
THR 1340.0045
ALA 1350.0052
ALA 1360.0059
ASP 1370.0063
MET 1380.0066
ALA 1390.0062
ALA 1400.0053
GLN 1410.0057
THR 1420.0057
THR 1430.0048
LYS 1440.0043
HIS 1450.0045
LYS 1460.0044
TRP 1470.0035
GLU 1480.0034
ALA 1490.0034
ALA 1500.0030
HIS 1510.0024
VAL 1520.0023
ALA 1530.0020
GLU 1540.0013
GLN 1550.0010
LEU 1560.0011
ARG 1570.0009
ALA 1580.0005
TYR 1590.0008
LEU 1600.0005
GLU 1610.0015
GLY 1620.0019
THR 1630.0020
CYS 1640.0017
VAL 1650.0024
GLU 1660.0033
TRP 1670.0034
LEU 1680.0031
ARG 1690.0042
ARG 1700.0048
TYR 1710.0044
LEU 1720.0045
GLU 1730.0057
ASN 1740.0060
GLY 1750.0055
LYS 1760.0056
GLU 1770.0058
THR 1780.0047
LEU 1790.0039
GLN 1800.0045
ARG 1810.0028
THR 1820.0027
ASP 1830.0027
ALA 1840.0029
PRO 1850.0026
LYS 1860.0023
THR 1870.0025
HIS 1880.0028
MET 1890.0029
THR 1900.0030
HIS 1910.0034
HIS 1920.0042
ALA 1930.0052
VAL 1940.0058
SER 1950.0068
ASP 1960.0075
HIS 1970.0073
GLU 1980.0062
ALA 1990.0050
THR 2000.0041
LEU 2010.0033
ARG 2020.0028
CYS 2030.0025
TRP 2040.0022
ALA 2050.0019
LEU 2060.0023
SER 2070.0024
PHE 2080.0022
TYR 2090.0019
PRO 2100.0016
ALA 2110.0010
GLU 2120.0015
ILE 2130.0018
THR 2140.0021
LEU 2150.0021
THR 2160.0021
TRP 2170.0026
GLN 2180.0034
ARG 2190.0043
ASP 2200.0052
GLY 2210.0048
GLU 2220.0042
ASP 2230.0032
GLN 2240.0028
THR 2250.0020
GLN 2260.0019
ASP 2270.0026
THR 2280.0018
GLU 2290.0017
LEU 2300.0014
VAL 2310.0015
GLU 2320.0013
THR 2330.0013
ARG 2340.0009
PRO 2350.0012
ALA 2360.0021
GLY 2370.0023
ASP 2380.0027
GLY 2390.0020
THR 2400.0021
PHE 2410.0015
GLN 2420.0017
LYS 2430.0017
TRP 2440.0019
ALA 2450.0019
ALA 2460.0025
VAL 2470.0032
VAL 2480.0043
VAL 2490.0048
PRO 2500.0059
SER 2510.0063
GLY 2520.0065
GLN 2530.0058
GLU 2540.0052
GLN 2550.0055
ARG 2560.0050
TYR 2570.0042
THR 2580.0037
CYS 2590.0030
HIS 2600.0028
VAL 2610.0026
GLN 2620.0026
HIS 2630.0024
GLU 2640.0025
GLY 2650.0027
LEU 2660.0033
PRO 2670.0040
LYS 2680.0041
PRO 2690.0036
LEU 2700.0035
THR 2710.0036
LEU 2720.0035
ARG 2730.0040
TRP 2740.0040
GLU 2750.0046
PRO 2760.0048
GLN 2780.0072
ARG 2790.0057
THR 2800.0054
PRO 2810.0039
LYS 2820.0034
ILE 2830.0021
GLN 2840.0009
VAL 2850.0003
TYR 2860.0012
SER 2870.0025
ARG 2880.0030
HIS 2890.0040
PRO 2900.0044
ALA 2910.0043
GLU 2920.0054
ASN 2930.0054
GLY 2940.0062
LYS 2950.0063
SER 2960.0058
ASN 2970.0047
PHE 2980.0037
LEU 2990.0026
ASN 3000.0018
CYS 3010.0013
TYR 3020.0009
VAL 3030.0022
SER 3040.0023
GLY 3050.0034
PHE 3060.0043
HIS 3070.0052
PRO 3080.0060
SER 3090.0053
ASP 3100.0062
ILE 3110.0055
GLU 3120.0055
VAL 3130.0042
ASP 3140.0040
LEU 3150.0030
LEU 3160.0031
LYS 3170.0031
ASN 3180.0027
GLY 3190.0034
GLU 3200.0046
ARG 3210.0050
ILE 3220.0050
GLU 3230.0062
LYS 3240.0065
VAL 3250.0052
GLU 3260.0051
HIS 3270.0040
SER 3280.0036
ASP 3290.0040
LEU 3300.0038
SER 3310.0026
PHE 3320.0024
SER 3330.0022
LYS 3340.0028
ASP 3350.0039
TRP 3360.0036
SER 3370.0038
PHE 3380.0032
TYR 3390.0022
LEU 3400.0024
LEU 3410.0021
TYR 3420.0029
TYR 3430.0032
THR 3440.0042
GLU 3450.0048
PHE 3460.0046
THR 3470.0050
PRO 3480.0040
THR 3490.0043
GLU 3500.0038
LYS 3510.0028
ASP 3520.0026
GLU 3530.0013
TYR 3540.0012
ALA 3550.0013
CYS 3560.0021
ARG 3570.0036
VAL 3580.0048
ASN 3590.0061
HIS 3600.0066
VAL 3610.0080
THR 3620.0078
LEU 3630.0082
SER 3640.0093
GLN 3650.0085
PRO 3660.0072
LYS 3670.0067
ILE 3680.0035
VAL 3690.0023
LYS 3700.0010
TRP 3710.0007
ASP 3720.0023
ARG 3730.0030
ASP 3740.0034
MET 3750.0030
SER 10.0056
GLN 20.0048
PHE 30.0054
ARG 40.0061
VAL 50.0068
SER 60.0077
PRO 70.0084
LEU 80.0085
ASP 90.0095
ARG 100.0099
THR 110.0095
TRP 120.0093
ASN 130.0096
LEU 140.0090
GLY 150.0088
GLU 160.0098
THR 170.0093
VAL 180.0087
GLU 190.0087
LEU 200.0080
LYS 210.0074
CYS 220.0065
GLN 230.0059
VAL 240.0049
LEU 250.0047
LEU 260.0041
SER 270.0038
ASN 280.0027
PRO 290.0028
THR 300.0021
SER 310.0025
GLY 320.0038
CYS 330.0042
SER 340.0040
TRP 350.0049
LEU 360.0044
PHE 370.0050
GLN 380.0049
PRO 390.0057
ARG 400.0066
GLY 410.0055
ALA 420.0050
ALA 430.0036
ALA 440.0026
SER 450.0014
PRO 460.0020
THR 470.0028
PHE 480.0034
LEU 490.0050
LEU 500.0055
TYR 510.0051
LEU 520.0058
SER 530.0054
GLN 540.0061
ASN 550.0070
LYS 560.0086
PRO 570.0075
LYS 580.0067
ALA 590.0065
ALA 600.0052
GLU 610.0051
GLY 620.0052
LEU 630.0051
ASP 640.0065
THR 650.0080
GLN 660.0088
ARG 670.0081
PHE 680.0070
SER 690.0078
GLY 700.0077
LYS 710.0077
ARG 720.0069
LEU 730.0076
GLY 740.0065
ASP 750.0056
THR 760.0067
PHE 770.0065
VAL 780.0074
LEU 790.0073
THR 800.0083
LEU 810.0076
SER 820.0086
ASP 830.0087
PHE 840.0082
ARG 850.0079
ARG 860.0083
GLU 870.0073
ASN 880.0070
GLU 890.0074
GLY 900.0069
TYR 910.0067
TYR 920.0064
PHE 930.0056
CYS 940.0049
SER 950.0036
ALA 960.0031
LEU 970.0019
SER 980.0022
ASN 990.0021
SER 1000.0021
ILE 1010.0027
MET 1020.0023
TYR 1030.0038
PHE 1040.0044
SER 1050.0061
HIS 1060.0064
PHE 1070.0067
VAL 1080.0074
PRO 1090.0079
VAL 1100.0082
PHE 1110.0080
LEU 1120.0082
PRO 1130.0085
ALA 1140.0086
SER 10.0069
GLN 20.0082
PHE 30.0083
ARG 40.0098
VAL 50.0095
SER 60.0120
PRO 70.0131
LEU 80.0111
ASP 90.0131
ARG 100.0144
THR 110.0151
TRP 120.0171
ASN 130.0196
LEU 140.0210
GLY 150.0221
GLU 160.0205
THR 170.0189
VAL 180.0159
GLU 190.0151
LEU 200.0124
LYS 210.0118
CYS 220.0100
GLN 230.0110
VAL 240.0098
LEU 250.0111
LEU 260.0097
SER 270.0114
ASN 280.0106
PRO 290.0098
THR 300.0094
SER 310.0067
GLY 320.0065
CYS 330.0060
SER 340.0049
TRP 350.0063
LEU 360.0048
PHE 370.0064
GLN 380.0062
PRO 390.0085
ARG 400.0082
GLY 410.0074
ALA 420.0079
ALA 430.0087
ALA 440.0072
SER 450.0061
PRO 460.0047
THR 470.0059
PHE 480.0051
LEU 490.0071
LEU 500.0070
TYR 510.0058
LEU 520.0076
SER 530.0074
GLN 540.0086
ASN 550.0081
LYS 560.0091
PRO 570.0082
LYS 580.0065
ALA 590.0075
ALA 600.0070
GLU 610.0087
GLY 620.0119
LEU 630.0116
ASP 640.0146
THR 650.0139
GLN 660.0173
ARG 670.0167
PHE 680.0139
SER 690.0135
GLY 700.0124
LYS 710.0128
ARG 720.0126
LEU 730.0148
GLY 740.0147
ASP 750.0128
THR 760.0125
PHE 770.0112
VAL 780.0124
LEU 790.0118
THR 800.0143
LEU 810.0154
SER 820.0185
ASP 830.0202
PHE 840.0180
ARG 850.0186
ARG 860.0179
GLU 870.0162
ASN 880.0139
GLU 890.0127
GLY 900.0093
TYR 910.0067
TYR 920.0069
PHE 930.0051
CYS 940.0050
SER 950.0033
ALA 960.0042
LEU 970.0042
SER 980.0060
ASN 990.0066
SER 1000.0052
ILE 1010.0048
MET 1020.0029
TYR 1030.0033
PHE 1040.0026
SER 1050.0041
HIS 1060.0043
PHE 1070.0047
VAL 1080.0076
PRO 1090.0085
VAL 1100.0112
PHE 1110.0129
LEU 1120.0161
PRO 1130.0167
ALA 1140.0161

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.