CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0492
MET 10.0168
SER 20.0096
THR 30.0090
ILE 40.0055
THR 50.0112
LYS 60.0138
ASP 70.0154
GLN 80.0102
ILE 90.0077
LEU 100.0129
GLU 110.0127
GLY 120.0099
VAL 130.0080
ALA 140.0090
ALA 150.0075
LEU 160.0069
SER 170.0100
VAL 180.0106
MET 190.0118
GLU 200.0090
ILE 210.0048
VAL 220.0054
GLU 230.0075
LEU 240.0080
ILE 250.0073
SER 260.0078
ALA 270.0136
MET 280.0147
GLU 290.0150
GLU 300.0186
LYS 310.0233
PHE 320.0247
GLY 330.0244
VAL 340.0229
SER 350.0176
ALA 360.0256
ALA 370.0197
ALA 380.0157
VAL 390.0259
ALA 400.0288
ALA 410.0197
GLY 420.0140
PRO 430.0083
ALA 440.0197
ALA 450.0148
ALA 460.0224
VAL 470.0328
GLU 480.0312
ALA 490.0316
ALA 500.0433
GLU 510.0443
GLU 520.0433
GLN 530.0349
THR 540.0413
GLU 550.0329
PHE 560.0243
ASP 570.0142
VAL 580.0100
VAL 590.0057
LEU 600.0125
ALA 610.0199
SER 620.0285
PHE 630.0314
GLY 640.0407
GLU 650.0492
ASN 660.0426
LYS 670.0379
VAL 680.0355
ALA 690.0291
VAL 700.0236
ILE 710.0232
LYS 720.0184
ALA 730.0115
VAL 740.0081
ARG 750.0130
GLY 760.0038
ALA 770.0082
THR 780.0156
GLY 790.0211
LEU 800.0266
GLY 810.0348
LEU 820.0352
LYS 830.0434
GLU 840.0364
ALA 850.0260
LYS 860.0347
ASP 870.0359
LEU 880.0252
VAL 890.0254
GLU 900.0340
SER 910.0281
ALA 920.0222
PRO 930.0165
ALA 940.0139
VAL 950.0085
LEU 960.0065
LYS 970.0145
GLU 980.0201
GLY 990.0289
VAL 1000.0302
ASN 1010.0396
LYS 1020.0402
ASP 1030.0446
GLU 1040.0352
ALA 1050.0277
GLU 1060.0348
THR 1070.0322
LEU 1080.0204
LYS 1090.0247
LYS 1100.0323
SER 1110.0229
LEU 1120.0202
GLU 1130.0320
GLU 1140.0345
ALA 1150.0293
GLY 1160.0361
ALA 1170.0288
SER 1180.0294
VAL 1190.0210
GLU 1200.0200
ILE 1210.0197
LYS 1220.0150
GLU 1230.0193
ALA 1240.0173
ALA 1250.0131
ALA 1260.0116
LYS 1270.0111
ALA 1280.0086
TYR 1290.0083
LYS 1300.0062
ILE 1310.0078
ILE 1320.0078
SER 1330.0074
LEU 1340.0073
LYS 1350.0072
TYR 1360.0084
THR 1370.0094
ARG 1380.0085
LYS 1390.0113
VAL 1400.0118
CYS 1410.0197
ILE 1420.0214
GLY 1430.0294
PRO 1440.0312
GLY 1450.0393
PRO 1460.0421
GLY 1470.0332
LYS 1480.0218
ALA 1490.0126
TYR 1500.0089
LYS 1510.0077
ILE 1520.0082
ILE 1530.0096
SER 1540.0113
LEU 1550.0129
LYS 1560.0138
TYR 1570.0126
THR 1580.0112
ARG 1590.0102
LYS 1600.0095
VAL 1610.0088
CYS 1620.0068
GLY 1630.0105
PRO 1640.0134
GLY 1650.0117
PRO 1660.0163
GLY 1670.0191
GLY 1680.0199
LYS 1690.0172
ALA 1700.0146
TYR 1710.0108
LYS 1720.0126
ILE 1730.0127
ILE 1740.0161
SER 1750.0183
LEU 1760.0212
LYS 1770.0218
TYR 1780.0205
THR 1790.0202
ARG 1800.0189
LYS 1810.0183
VAL 1820.0141
GLY 1830.0161
PRO 1840.0178
GLY 1850.0233
PRO 1860.0234
GLY 1870.0156
ILE 1880.0152
ILE 1890.0082
SER 1900.0095
LEU 1910.0075
LYS 1920.0080
TYR 1930.0076
THR 1940.0085
ARG 1950.0079
LYS 1960.0072
VAL 1970.0079
CYS 1980.0081
ILE 1990.0091
GLN 2000.0100
LEU 2010.0068
GLY 2020.0052
GLY 2030.0035
PRO 2040.0023
GLY 2050.0033
PRO 2060.0040
GLY 2070.0036
ASN 2080.0038
ILE 2090.0041
LYS 2100.0036
THR 2110.0026
ALA 2120.0032
PHE 2130.0033
HIS 2140.0029
CYS 2150.0031
TYR 2160.0031
ALA 2170.0024
ALA 2180.0029
TYR 2190.0037
MET 2200.0034
THR 2210.0036
SER 2220.0036
ILE 2230.0037
LYS 2240.0038
ALA 2250.0039
CYS 2260.0037
ASP 2270.0031
LEU 2280.0072
LYS 2290.0056
LYS 2300.0116
PRO 2310.0157
LEU 2320.0196
MET 2330.0178
GLU 2340.0245
SER 2350.0258
GLY 2360.0204
TRP 2370.0160
SER 2380.0157
ASP 2390.0115
THR 2400.0126
ALA 2410.0102
HIS 2420.0163
GLY 2430.0096
LYS 2440.0078
LYS 2450.0111
SER 2460.0160
LEU 2470.0122
PRO 2480.0165
SER 2490.0173
SER 2500.0118
SER 2510.0041
SER 2520.0048
TYR 2530.0047
SER 2540.0055
TYR 2550.0056
ARG 2560.0066
ARG 2570.0068
LYS 2580.0072
LEU 2590.0064
THR 2600.0072
ASN 2610.0065
PRO 2620.0097
ALA 2630.0061
ASN 2640.0093
LYS 2650.0077
GLU 2660.0076
GLU 2670.0059
SER 2680.0064
ILE 2690.0041
LYS 2700.0063
LYS 2710.0028
GLN 2720.0016
LYS 2730.0025
TYR 2740.0048
SER 2750.0068
TYR 2760.0115
PRO 2770.0126
TRP 2780.0119
GLN 2790.0114
THR 2800.0125
SER 2810.0119
LYS 2820.0072
CYS 2830.0054
PHE 2840.0103
ASP 2880.0066
TYR 2890.0055
GLN 2900.0088
TYR 2910.0154
CYS 2970.0063
ASN 2980.0046
PRO 2990.0046
GLY 3000.0037
LYS 3010.0022
LYS 3020.0027
ASN 3030.0030
THR 3040.0035
ILE 3050.0039
SER 3060.0045
GLY 3070.0040
TYR 3080.0046
LYS 3090.0046
ARG 3100.0038
MET 3110.0038
MET 3120.0045
ALA 3130.0045
THR 3140.0037
LYS 3150.0039
ASP 3160.0040
SER 3170.0029
PHE 3180.0025
GLN 3190.0026
SER 3200.0033
PHE 3210.0031
ASN 3220.0038
LEU 3230.0037
THR 3240.0041
GLU 3250.0046
PRO 3260.0047
HIS 3270.0061
ILE 3280.0081
THR 3290.0098
THR 3300.0120
ASN 3310.0111
LYS 3320.0082
LEU 3330.0062
GLU 3340.0044
TRP 3350.0026
ILE 3360.0012
ASP 3370.0012
PRO 3380.0031
ASP 3390.0039
GLY 3400.0036
ASN 3410.0039
THR 3420.0045
ARG 3430.0091
GLY 3440.0124
GLY 3450.0155
GLY 3460.0200
GLY 10.0009
SER 20.0003
HIS 30.0010
SER 40.0015
MET 50.0023
ARG 60.0027
TYR 70.0032
PHE 80.0034
PHE 90.0038
THR 100.0041
SER 110.0043
VAL 120.0039
SER 130.0035
ARG 140.0032
PRO 150.0029
GLY 160.0012
ARG 170.0023
GLY 180.0029
GLU 190.0036
PRO 200.0045
ARG 210.0046
PHE 220.0043
ILE 230.0040
ALA 240.0037
VAL 250.0034
GLY 260.0033
TYR 270.0026
VAL 280.0021
ASP 290.0016
ASP 300.0020
THR 310.0025
GLN 320.0029
PHE 330.0031
VAL 340.0035
ARG 350.0039
PHE 360.0043
ASP 370.0044
SER 380.0046
ASP 390.0048
ALA 400.0048
ALA 410.0056
SER 420.0054
GLN 430.0052
ARG 440.0048
MET 450.0043
GLU 460.0043
PRO 470.0039
ARG 480.0037
ALA 490.0034
PRO 500.0036
TRP 510.0033
ILE 520.0034
GLU 530.0039
GLN 540.0037
GLU 550.0036
GLY 560.0038
PRO 570.0043
GLU 580.0042
TYR 590.0039
TRP 600.0043
ASP 610.0046
GLY 620.0043
GLU 630.0041
THR 640.0046
ARG 650.0048
LYS 660.0043
VAL 670.0043
LYS 680.0048
ALA 690.0048
HIS 700.0044
SER 710.0044
GLN 720.0046
THR 730.0045
HIS 740.0044
ARG 750.0046
VAL 760.0049
ASP 770.0046
LEU 780.0046
GLY 790.0048
THR 800.0047
LEU 810.0041
ARG 820.0041
GLY 830.0038
TYR 840.0034
TYR 850.0029
ASN 860.0041
GLN 870.0047
SER 880.0065
GLU 890.0073
ALA 900.0076
GLY 910.0037
SER 920.0038
HIS 930.0039
THR 940.0041
VAL 950.0043
GLN 960.0042
ARG 970.0039
MET 980.0035
TYR 990.0033
GLY 1000.0029
CYS 1010.0023
ASP 1020.0015
VAL 1030.0010
GLY 1040.0004
SER 1050.0003
ASP 1060.0003
TRP 1070.0006
ARG 1080.0012
PHE 1090.0017
LEU 1100.0015
ARG 1110.0021
GLY 1120.0026
TYR 1130.0029
HIS 1140.0035
GLN 1150.0036
TYR 1160.0042
ALA 1170.0042
TYR 1180.0041
ASP 1190.0041
GLY 1200.0042
LYS 1210.0036
ASP 1220.0036
TYR 1230.0038
ILE 1240.0039
ALA 1250.0038
LEU 1260.0035
LYS 1270.0032
GLU 1280.0029
ASP 1290.0034
LEU 1300.0037
ARG 1310.0043
SER 1320.0041
TRP 1330.0039
THR 1340.0035
ALA 1350.0038
ALA 1360.0035
ASP 1370.0031
MET 1380.0031
ALA 1390.0032
ALA 1400.0038
GLN 1410.0039
THR 1420.0045
THR 1430.0045
LYS 1440.0044
HIS 1450.0049
LYS 1460.0054
TRP 1470.0052
GLU 1480.0054
ALA 1490.0060
ALA 1500.0061
HIS 1510.0058
VAL 1520.0053
ALA 1530.0047
GLU 1540.0051
GLN 1550.0051
LEU 1560.0043
ARG 1570.0040
ALA 1580.0042
TYR 1590.0040
LEU 1600.0033
GLU 1610.0029
GLY 1620.0031
THR 1630.0033
CYS 1640.0029
VAL 1650.0023
GLU 1660.0022
TRP 1670.0026
LEU 1680.0022
ARG 1690.0017
ARG 1700.0023
TYR 1710.0025
LEU 1720.0019
GLU 1730.0021
ASN 1740.0028
GLY 1750.0028
LYS 1760.0026
GLU 1770.0033
THR 1780.0032
LEU 1790.0023
GLN 1800.0021
ARG 1810.0038
THR 1820.0036
ASP 1830.0040
ALA 1840.0040
PRO 1850.0038
LYS 1860.0043
THR 1870.0039
HIS 1880.0037
MET 1890.0031
THR 1900.0027
HIS 1910.0023
HIS 1920.0022
ALA 1930.0022
VAL 1940.0018
SER 1950.0020
ASP 1960.0026
HIS 1970.0026
GLU 1980.0023
ALA 1990.0023
THR 2000.0020
LEU 2010.0022
ARG 2020.0021
CYS 2030.0025
TRP 2040.0027
ALA 2050.0029
LEU 2060.0039
SER 2070.0043
PHE 2080.0036
TYR 2090.0031
PRO 2100.0023
ALA 2110.0018
GLU 2120.0016
ILE 2130.0018
THR 2140.0019
LEU 2150.0019
THR 2160.0019
TRP 2170.0022
GLN 2180.0025
ARG 2190.0028
ASP 2200.0033
GLY 2210.0029
GLU 2220.0026
ASP 2230.0020
GLN 2240.0019
THR 2250.0015
GLN 2260.0013
ASP 2270.0015
THR 2280.0015
GLU 2290.0016
LEU 2300.0016
VAL 2310.0023
GLU 2320.0022
THR 2330.0019
ARG 2340.0025
PRO 2350.0034
ALA 2360.0044
GLY 2370.0052
ASP 2380.0058
GLY 2390.0049
THR 2400.0043
PHE 2410.0030
GLN 2420.0028
LYS 2430.0020
TRP 2440.0019
ALA 2450.0017
ALA 2460.0017
VAL 2470.0018
VAL 2480.0021
VAL 2490.0024
PRO 2500.0027
SER 2510.0029
GLY 2520.0034
GLN 2530.0033
GLU 2540.0032
GLN 2550.0036
ARG 2560.0034
TYR 2570.0031
THR 2580.0031
CYS 2590.0027
HIS 2600.0026
VAL 2610.0027
GLN 2620.0028
HIS 2630.0028
GLU 2640.0031
GLY 2650.0036
LEU 2660.0041
PRO 2670.0048
LYS 2680.0046
PRO 2690.0039
LEU 2700.0038
THR 2710.0036
LEU 2720.0036
ARG 2730.0038
TRP 2740.0036
GLU 2750.0040
PRO 2760.0046
GLN 2780.0092
ARG 2790.0078
THR 2800.0081
PRO 2810.0070
LYS 2820.0070
ILE 2830.0064
GLN 2840.0048
VAL 2850.0059
TYR 2860.0052
SER 2870.0065
ARG 2880.0067
HIS 2890.0076
PRO 2900.0074
ALA 2910.0084
GLU 2920.0103
ASN 2930.0116
GLY 2940.0140
LYS 2950.0134
SER 2960.0132
ASN 2970.0108
PHE 2980.0092
LEU 2990.0083
ASN 3000.0068
CYS 3010.0065
TYR 3020.0049
VAL 3030.0051
SER 3040.0046
GLY 3050.0053
PHE 3060.0059
HIS 3070.0060
PRO 3080.0066
SER 3090.0050
ASP 3100.0072
ILE 3110.0086
GLU 3120.0107
VAL 3130.0111
ASP 3140.0122
LEU 3150.0113
LEU 3160.0129
LYS 3170.0137
ASN 3180.0147
GLY 3190.0154
GLU 3200.0169
ARG 3210.0162
ILE 3220.0153
GLU 3230.0169
LYS 3240.0154
VAL 3250.0123
GLU 3260.0102
HIS 3270.0072
SER 3280.0046
ASP 3290.0042
LEU 3300.0043
SER 3310.0035
PHE 3320.0035
SER 3330.0036
LYS 3340.0036
ASP 3350.0039
TRP 3360.0041
SER 3370.0041
PHE 3380.0046
TYR 3390.0042
LEU 3400.0050
LEU 3410.0054
TYR 3420.0070
TYR 3430.0086
THR 3440.0109
GLU 3450.0120
PHE 3460.0124
THR 3470.0130
PRO 3480.0113
THR 3490.0121
GLU 3500.0107
LYS 3510.0119
ASP 3520.0124
GLU 3530.0109
TYR 3540.0103
ALA 3550.0101
CYS 3560.0101
ARG 3570.0125
VAL 3580.0115
ASN 3590.0126
HIS 3600.0110
VAL 3610.0119
THR 3620.0127
LEU 3630.0165
SER 3640.0214
GLN 3650.0210
PRO 3660.0180
LYS 3670.0156
ILE 3680.0124
VAL 3690.0095
LYS 3700.0086
TRP 3710.0068
ASP 3720.0045
ARG 3730.0051
ASP 3740.0035
MET 3750.0021
SER 10.0026
GLN 20.0023
PHE 30.0025
ARG 40.0030
VAL 50.0031
SER 60.0035
PRO 70.0041
LEU 80.0041
ASP 90.0049
ARG 100.0051
THR 110.0049
TRP 120.0051
ASN 130.0052
LEU 140.0052
GLY 150.0056
GLU 160.0058
THR 170.0054
VAL 180.0048
GLU 190.0045
LEU 200.0039
LYS 210.0035
CYS 220.0029
GLN 230.0027
VAL 240.0021
LEU 250.0025
LEU 260.0025
SER 270.0027
ASN 280.0022
PRO 290.0017
THR 300.0014
SER 310.0011
GLY 320.0014
CYS 330.0018
SER 340.0020
TRP 350.0025
LEU 360.0025
PHE 370.0028
GLN 380.0026
PRO 390.0031
ARG 400.0031
GLY 410.0032
ALA 420.0023
ALA 430.0021
ALA 440.0026
SER 450.0024
PRO 460.0022
THR 470.0028
PHE 480.0027
LEU 490.0032
LEU 500.0030
TYR 510.0025
LEU 520.0023
SER 530.0018
GLN 540.0016
ASN 550.0021
LYS 560.0030
PRO 570.0031
LYS 580.0032
ALA 590.0036
ALA 600.0036
GLU 610.0042
GLY 620.0047
LEU 630.0044
ASP 640.0050
THR 650.0049
GLN 660.0055
ARG 670.0052
PHE 680.0044
SER 690.0042
GLY 700.0037
LYS 710.0032
ARG 720.0026
LEU 730.0029
GLY 740.0023
ASP 750.0022
THR 760.0028
PHE 770.0027
VAL 780.0034
LEU 790.0037
THR 800.0044
LEU 810.0047
SER 820.0053
ASP 830.0055
PHE 840.0050
ARG 850.0048
ARG 860.0041
GLU 870.0039
ASN 880.0042
GLU 890.0039
GLY 900.0036
TYR 910.0030
TYR 920.0029
PHE 930.0024
CYS 940.0021
SER 950.0015
ALA 960.0015
LEU 970.0013
SER 980.0016
ASN 990.0018
SER 1000.0016
ILE 1010.0017
MET 1020.0013
TYR 1030.0016
PHE 1040.0016
SER 1050.0022
HIS 1060.0021
PHE 1070.0025
VAL 1080.0030
PRO 1090.0036
VAL 1100.0040
PHE 1110.0043
LEU 1120.0043
PRO 1130.0044
ALA 1140.0039
SER 10.0043
GLN 20.0044
PHE 30.0042
ARG 40.0048
VAL 50.0043
SER 60.0049
PRO 70.0050
LEU 80.0047
ASP 90.0052
ARG 100.0050
THR 110.0045
TRP 120.0048
ASN 130.0052
LEU 140.0054
GLY 150.0062
GLU 160.0060
THR 170.0058
VAL 180.0050
GLU 190.0051
LEU 200.0044
LYS 210.0045
CYS 220.0042
GLN 230.0047
VAL 240.0043
LEU 250.0049
LEU 260.0043
SER 270.0047
ASN 280.0041
PRO 290.0039
THR 300.0036
SER 310.0026
GLY 320.0027
CYS 330.0026
SER 340.0021
TRP 350.0023
LEU 360.0017
PHE 370.0016
GLN 380.0013
PRO 390.0014
ARG 400.0012
GLY 410.0018
ALA 420.0024
ALA 430.0026
ALA 440.0018
SER 450.0017
PRO 460.0012
THR 470.0015
PHE 480.0016
LEU 490.0023
LEU 500.0025
TYR 510.0025
LEU 520.0030
SER 530.0030
GLN 540.0034
ASN 550.0035
LYS 560.0040
PRO 570.0034
LYS 580.0029
ALA 590.0029
ALA 600.0025
GLU 610.0035
GLY 620.0042
LEU 630.0036
ASP 640.0047
THR 650.0049
GLN 660.0059
ARG 670.0053
PHE 680.0045
SER 690.0046
GLY 700.0044
LYS 710.0048
ARG 720.0047
LEU 730.0056
GLY 740.0055
ASP 750.0049
THR 760.0049
PHE 770.0043
VAL 780.0045
LEU 790.0041
THR 800.0048
LEU 810.0047
SER 820.0057
ASP 830.0058
PHE 840.0049
ARG 850.0047
ARG 860.0039
GLU 870.0036
ASN 880.0033
GLU 890.0027
GLY 900.0019
TYR 910.0019
TYR 920.0022
PHE 930.0023
CYS 940.0025
SER 950.0021
ALA 960.0023
LEU 970.0023
SER 980.0029
ASN 990.0029
SER 1000.0024
ILE 1010.0027
MET 1020.0023
TYR 1030.0027
PHE 1040.0025
SER 1050.0030
HIS 1060.0032
PHE 1070.0026
VAL 1080.0031
PRO 1090.0028
VAL 1100.0031
PHE 1110.0031
LEU 1120.0038
PRO 1130.0041
ALA 1140.0034

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.