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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0830
MET 10.0028
SER 20.0017
THR 30.0014
ILE 40.0007
THR 50.0013
LYS 60.0016
ASP 70.0018
GLN 80.0010
ILE 90.0009
LEU 100.0015
GLU 110.0013
GLY 120.0013
VAL 130.0009
ALA 140.0008
ALA 150.0011
LEU 160.0018
SER 170.0028
VAL 180.0028
MET 190.0028
GLU 200.0021
ILE 210.0007
VAL 220.0009
GLU 230.0014
LEU 240.0018
ILE 250.0019
SER 260.0016
ALA 270.0031
MET 280.0039
GLU 290.0038
GLU 300.0042
LYS 310.0057
PHE 320.0063
GLY 330.0057
VAL 340.0059
SER 350.0048
ALA 360.0078
ALA 370.0069
ALA 380.0047
VAL 390.0074
ALA 400.0096
ALA 410.0079
GLY 420.0061
PRO 430.0047
ALA 440.0092
ALA 450.0074
ALA 460.0071
VAL 470.0101
GLU 480.0090
ALA 490.0077
ALA 500.0108
GLU 510.0111
GLU 520.0109
GLN 530.0091
THR 540.0104
GLU 550.0085
PHE 560.0069
ASP 570.0047
VAL 580.0042
VAL 590.0036
LEU 600.0043
ALA 610.0058
SER 620.0074
PHE 630.0083
GLY 640.0109
GLU 650.0129
ASN 660.0119
LYS 670.0102
VAL 680.0102
ALA 690.0095
VAL 700.0077
ILE 710.0069
LYS 720.0068
ALA 730.0058
VAL 740.0037
ARG 750.0034
GLY 760.0031
ALA 770.0026
THR 780.0004
GLY 790.0016
LEU 800.0037
GLY 810.0065
LEU 820.0078
LYS 830.0089
GLU 840.0066
ALA 850.0052
LYS 860.0075
ASP 870.0069
LEU 880.0044
VAL 890.0056
GLU 900.0069
SER 910.0046
ALA 920.0040
PRO 930.0029
ALA 940.0017
VAL 950.0006
LEU 960.0014
LYS 970.0029
GLU 980.0043
GLY 990.0066
VAL 1000.0071
ASN 1010.0094
LYS 1020.0102
ASP 1030.0107
GLU 1040.0084
ALA 1050.0076
GLU 1060.0095
THR 1070.0086
LEU 1080.0063
LYS 1090.0079
LYS 1100.0095
SER 1110.0078
LEU 1120.0074
GLU 1130.0099
GLU 1140.0107
ALA 1150.0096
GLY 1160.0106
ALA 1170.0086
SER 1180.0085
VAL 1190.0070
GLU 1200.0069
ILE 1210.0064
LYS 1220.0057
GLU 1230.0066
ALA 1240.0056
ALA 1250.0051
ALA 1260.0043
LYS 1270.0043
ALA 1280.0038
TYR 1290.0037
LYS 1300.0033
ILE 1310.0033
ILE 1320.0039
SER 1330.0038
LEU 1340.0045
LYS 1350.0046
TYR 1360.0051
THR 1370.0053
ARG 1380.0055
LYS 1390.0059
VAL 1400.0060
CYS 1410.0065
ILE 1420.0063
GLY 1430.0070
PRO 1440.0078
GLY 1450.0084
PRO 1460.0093
GLY 1470.0099
LYS 1480.0097
ALA 1490.0097
TYR 1500.0089
LYS 1510.0083
ILE 1520.0078
ILE 1530.0067
SER 1540.0064
LEU 1550.0054
LYS 1560.0051
TYR 1570.0047
THR 1580.0046
ARG 1590.0044
LYS 1600.0046
VAL 1610.0045
CYS 1620.0054
GLY 1630.0058
PRO 1640.0073
GLY 1650.0084
PRO 1660.0099
GLY 1670.0104
GLY 1680.0093
LYS 1690.0087
ALA 1700.0072
TYR 1710.0069
LYS 1720.0059
ILE 1730.0054
ILE 1740.0047
SER 1750.0045
LEU 1760.0043
LYS 1770.0052
TYR 1780.0057
THR 1790.0067
ARG 1800.0075
LYS 1810.0088
VAL 1820.0096
GLY 1830.0105
PRO 1840.0109
GLY 1850.0102
PRO 1860.0089
GLY 1870.0080
ILE 1880.0074
ILE 1890.0064
SER 1900.0061
LEU 1910.0053
LYS 1920.0051
TYR 1930.0049
THR 1940.0047
ARG 1950.0045
LYS 1960.0036
VAL 1970.0039
CYS 1980.0036
ILE 1990.0042
GLN 2000.0042
LEU 2010.0033
GLY 2020.0032
GLY 2030.0032
PRO 2040.0027
GLY 2050.0022
PRO 2060.0019
GLY 2070.0017
ASN 2080.0018
ILE 2090.0018
LYS 2100.0016
THR 2110.0018
ALA 2120.0021
PHE 2130.0020
HIS 2140.0017
CYS 2150.0018
TYR 2160.0027
ALA 2170.0032
ALA 2180.0024
TYR 2190.0021
MET 2200.0031
THR 2210.0048
SER 2220.0044
ILE 2230.0056
LYS 2240.0062
ALA 2250.0076
CYS 2260.0189
ASP 2270.0164
LEU 2280.0163
LYS 2290.0163
LYS 2300.0166
PRO 2310.0349
LEU 2320.0490
MET 2330.0507
GLU 2340.0677
SER 2350.0751
GLY 2360.0623
TRP 2370.0548
SER 2380.0602
ASP 2390.0544
THR 2400.0618
ALA 2410.0490
HIS 2420.0668
GLY 2430.0311
LYS 2440.0245
LYS 2450.0365
SER 2460.0585
LEU 2470.0499
PRO 2480.0756
SER 2490.0830
SER 2500.0616
SER 2510.0223
SER 2520.0183
TYR 2530.0200
SER 2540.0229
TYR 2550.0283
ARG 2560.0345
ARG 2570.0344
LYS 2580.0374
LEU 2590.0327
THR 2600.0375
ASN 2610.0256
PRO 2620.0345
ALA 2630.0307
ASN 2640.0465
LYS 2650.0414
GLU 2660.0393
GLU 2670.0280
SER 2680.0286
ILE 2690.0141
LYS 2700.0152
LYS 2710.0133
GLN 2720.0086
LYS 2730.0097
TYR 2740.0127
SER 2750.0162
TYR 2760.0201
PRO 2770.0169
TRP 2780.0197
GLN 2790.0174
THR 2800.0129
SER 2810.0131
LYS 2820.0124
CYS 2830.0138
PHE 2840.0103
ASP 2880.0240
TYR 2890.0114
GLN 2900.0134
TYR 2910.0131
CYS 2970.0380
ASN 2980.0203
PRO 2990.0143
GLY 3000.0114
LYS 3010.0192
LYS 3020.0251
ASN 3030.0168
THR 3040.0075
ILE 3050.0065
SER 3060.0048
GLY 3070.0055
TYR 3080.0051
LYS 3090.0045
ARG 3100.0044
MET 3110.0019
MET 3120.0054
ALA 3130.0063
THR 3140.0050
LYS 3150.0053
ASP 3160.0063
SER 3170.0044
PHE 3180.0034
GLN 3190.0025
SER 3200.0026
PHE 3210.0018
ASN 3220.0013
LEU 3230.0013
THR 3240.0014
GLU 3250.0015
PRO 3260.0023
HIS 3270.0037
ILE 3280.0053
THR 3290.0072
THR 3300.0092
ASN 3310.0096
LYS 3320.0081
LEU 3330.0064
GLU 3340.0055
TRP 3350.0042
ILE 3360.0045
ASP 3370.0046
PRO 3380.0042
ASP 3390.0068
GLY 3400.0088
ASN 3410.0094
THR 3420.0134
ARG 3430.0216
GLY 3440.0275
GLY 3450.0340
GLY 3460.0413
GLY 10.0027
SER 20.0025
HIS 30.0023
SER 40.0021
MET 50.0020
ARG 60.0019
TYR 70.0019
PHE 80.0018
PHE 90.0020
THR 100.0021
SER 110.0024
VAL 120.0024
SER 130.0025
ARG 140.0027
PRO 150.0027
GLY 160.0027
ARG 170.0027
GLY 180.0026
GLU 190.0026
PRO 200.0026
ARG 210.0025
PHE 220.0024
ILE 230.0022
ALA 240.0020
VAL 250.0019
GLY 260.0018
TYR 270.0018
VAL 280.0019
ASP 290.0020
ASP 300.0018
THR 310.0017
GLN 320.0017
PHE 330.0018
VAL 340.0019
ARG 350.0019
PHE 360.0022
ASP 370.0023
SER 380.0026
ASP 390.0026
ALA 400.0025
ALA 410.0027
SER 420.0025
GLN 430.0026
ARG 440.0025
MET 450.0023
GLU 460.0020
PRO 470.0019
ARG 480.0017
ALA 490.0017
PRO 500.0018
TRP 510.0020
ILE 520.0020
GLU 530.0020
GLN 540.0021
GLU 550.0023
GLY 560.0025
PRO 570.0026
GLU 580.0029
TYR 590.0026
TRP 600.0025
ASP 610.0028
GLY 620.0028
GLU 630.0026
THR 640.0026
ARG 650.0029
LYS 660.0027
VAL 670.0025
LYS 680.0028
ALA 690.0029
HIS 700.0026
SER 710.0026
GLN 720.0027
THR 730.0026
HIS 740.0025
ARG 750.0027
VAL 760.0027
ASP 770.0025
LEU 780.0026
GLY 790.0027
THR 800.0026
LEU 810.0023
ARG 820.0026
GLY 830.0025
TYR 840.0021
TYR 850.0023
ASN 860.0027
GLN 870.0029
SER 880.0032
GLU 890.0033
ALA 900.0034
GLY 910.0027
SER 920.0026
HIS 930.0024
THR 940.0023
VAL 950.0022
GLN 960.0020
ARG 970.0020
MET 980.0019
TYR 990.0020
GLY 1000.0020
CYS 1010.0022
ASP 1020.0022
VAL 1030.0025
GLY 1040.0027
SER 1050.0029
ASP 1060.0031
TRP 1070.0028
ARG 1080.0029
PHE 1090.0028
LEU 1100.0026
ARG 1110.0023
GLY 1120.0022
TYR 1130.0020
HIS 1140.0020
GLN 1150.0019
TYR 1160.0019
ALA 1170.0019
TYR 1180.0021
ASP 1190.0020
GLY 1200.0017
LYS 1210.0015
ASP 1220.0015
TYR 1230.0018
ILE 1240.0019
ALA 1250.0018
LEU 1260.0019
LYS 1270.0019
GLU 1280.0018
ASP 1290.0022
LEU 1300.0022
ARG 1310.0024
SER 1320.0022
TRP 1330.0020
THR 1340.0018
ALA 1350.0020
ALA 1360.0016
ASP 1370.0017
MET 1380.0018
ALA 1390.0018
ALA 1400.0018
GLN 1410.0022
THR 1420.0024
THR 1430.0023
LYS 1440.0022
HIS 1450.0025
LYS 1460.0028
TRP 1470.0026
GLU 1480.0026
ALA 1490.0029
ALA 1500.0029
HIS 1510.0029
VAL 1520.0027
ALA 1530.0026
GLU 1540.0028
GLN 1550.0028
LEU 1560.0026
ARG 1570.0027
ALA 1580.0028
TYR 1590.0027
LEU 1600.0025
GLU 1610.0027
GLY 1620.0029
THR 1630.0028
CYS 1640.0025
VAL 1650.0025
GLU 1660.0028
TRP 1670.0026
LEU 1680.0024
ARG 1690.0026
ARG 1700.0026
TYR 1710.0023
LEU 1720.0024
GLU 1730.0026
ASN 1740.0024
GLY 1750.0022
LYS 1760.0024
GLU 1770.0024
THR 1780.0022
LEU 1790.0023
GLN 1800.0026
ARG 1810.0030
THR 1820.0031
ASP 1830.0031
ALA 1840.0035
PRO 1850.0034
LYS 1860.0038
THR 1870.0039
HIS 1880.0043
MET 1890.0044
THR 1900.0046
HIS 1910.0050
HIS 1920.0053
ALA 1930.0058
VAL 1940.0056
SER 1950.0063
ASP 1960.0070
HIS 1970.0064
GLU 1980.0056
ALA 1990.0053
THR 2000.0046
LEU 2010.0044
ARG 2020.0039
CYS 2030.0037
TRP 2040.0035
ALA 2050.0032
LEU 2060.0032
SER 2070.0031
PHE 2080.0029
TYR 2090.0026
PRO 2100.0024
ALA 2110.0022
GLU 2120.0023
ILE 2130.0024
THR 2140.0025
LEU 2150.0027
THR 2160.0030
TRP 2170.0034
GLN 2180.0037
ARG 2190.0041
ASP 2200.0045
GLY 2210.0042
GLU 2220.0035
ASP 2230.0029
GLN 2240.0028
THR 2250.0022
GLN 2260.0021
ASP 2270.0026
THR 2280.0026
GLU 2290.0026
LEU 2300.0024
VAL 2310.0021
GLU 2320.0020
THR 2330.0020
ARG 2340.0021
PRO 2350.0021
ALA 2360.0026
GLY 2370.0024
ASP 2380.0026
GLY 2390.0023
THR 2400.0026
PHE 2410.0024
GLN 2420.0026
LYS 2430.0026
TRP 2440.0029
ALA 2450.0029
ALA 2460.0034
VAL 2470.0037
VAL 2480.0042
VAL 2490.0046
PRO 2500.0052
SER 2510.0060
GLY 2520.0062
GLN 2530.0056
GLU 2540.0054
GLN 2550.0057
ARG 2560.0051
TYR 2570.0046
THR 2580.0045
CYS 2590.0039
HIS 2600.0037
VAL 2610.0033
GLN 2620.0032
HIS 2630.0031
GLU 2640.0032
GLY 2650.0035
LEU 2660.0039
PRO 2670.0045
LYS 2680.0045
PRO 2690.0041
LEU 2700.0043
THR 2710.0046
LEU 2720.0048
ARG 2730.0052
TRP 2740.0053
GLU 2750.0060
PRO 2760.0064
GLN 2780.0019
ARG 2790.0017
THR 2800.0015
PRO 2810.0014
LYS 2820.0014
ILE 2830.0016
GLN 2840.0020
VAL 2850.0024
TYR 2860.0028
SER 2870.0033
ARG 2880.0033
HIS 2890.0039
PRO 2900.0043
ALA 2910.0045
GLU 2920.0051
ASN 2930.0053
GLY 2940.0056
LYS 2950.0053
SER 2960.0048
ASN 2970.0042
PHE 2980.0035
LEU 2990.0032
ASN 3000.0027
CYS 3010.0023
TYR 3020.0019
VAL 3030.0014
SER 3040.0015
GLY 3050.0016
PHE 3060.0015
HIS 3070.0016
PRO 3080.0017
SER 3090.0013
ASP 3100.0011
ILE 3110.0011
GLU 3120.0013
VAL 3130.0019
ASP 3140.0025
LEU 3150.0028
LEU 3160.0032
LYS 3170.0038
ASN 3180.0041
GLY 3190.0036
GLU 3200.0040
ARG 3210.0037
ILE 3220.0038
GLU 3230.0040
LYS 3240.0037
VAL 3250.0031
GLU 3260.0026
HIS 3270.0020
SER 3280.0015
ASP 3290.0015
LEU 3300.0016
SER 3310.0015
PHE 3320.0015
SER 3330.0014
LYS 3340.0014
ASP 3350.0015
TRP 3360.0016
SER 3370.0016
PHE 3380.0015
TYR 3390.0015
LEU 3400.0016
LEU 3410.0019
TYR 3420.0021
TYR 3430.0027
THR 3440.0033
GLU 3450.0039
PHE 3460.0042
THR 3470.0048
PRO 3480.0046
THR 3490.0051
GLU 3500.0051
LYS 3510.0050
ASP 3520.0046
GLU 3530.0038
TYR 3540.0034
ALA 3550.0027
CYS 3560.0022
ARG 3570.0020
VAL 3580.0010
ASN 3590.0011
HIS 3600.0011
VAL 3610.0013
THR 3620.0018
LEU 3630.0024
SER 3640.0035
GLN 3650.0031
PRO 3660.0021
LYS 3670.0018
ILE 3680.0019
VAL 3690.0018
LYS 3700.0025
TRP 3710.0030
ASP 3720.0033
ARG 3730.0040
ASP 3740.0040
MET 3750.0038
SER 10.0012
GLN 20.0012
PHE 30.0010
ARG 40.0011
VAL 50.0010
SER 60.0011
PRO 70.0010
LEU 80.0009
ASP 90.0010
ARG 100.0009
THR 110.0013
TRP 120.0012
ASN 130.0012
LEU 140.0012
GLY 150.0013
GLU 160.0007
THR 170.0007
VAL 180.0007
GLU 190.0008
LEU 200.0008
LYS 210.0007
CYS 220.0008
GLN 230.0009
VAL 240.0010
LEU 250.0011
LEU 260.0013
SER 270.0014
ASN 280.0015
PRO 290.0013
THR 300.0016
SER 310.0015
GLY 320.0014
CYS 330.0011
SER 340.0011
TRP 350.0011
LEU 360.0012
PHE 370.0013
GLN 380.0015
PRO 390.0019
ARG 400.0022
GLY 410.0035
ALA 420.0037
ALA 430.0033
ALA 440.0029
SER 450.0023
PRO 460.0015
THR 470.0017
PHE 480.0016
LEU 490.0017
LEU 500.0017
TYR 510.0017
LEU 520.0017
SER 530.0019
GLN 540.0022
ASN 550.0025
LYS 560.0026
PRO 570.0023
LYS 580.0023
ALA 590.0023
ALA 600.0022
GLU 610.0027
GLY 620.0025
LEU 630.0020
ASP 640.0016
THR 650.0016
GLN 660.0013
ARG 670.0011
PHE 680.0010
SER 690.0010
GLY 700.0009
LYS 710.0010
ARG 720.0011
LEU 730.0011
GLY 740.0013
ASP 750.0012
THR 760.0010
PHE 770.0010
VAL 780.0009
LEU 790.0008
THR 800.0007
LEU 810.0006
SER 820.0007
ASP 830.0008
PHE 840.0009
ARG 850.0012
ARG 860.0013
GLU 870.0014
ASN 880.0013
GLU 890.0013
GLY 900.0013
TYR 910.0011
TYR 920.0009
PHE 930.0008
CYS 940.0009
SER 950.0010
ALA 960.0011
LEU 970.0014
SER 980.0017
ASN 990.0021
SER 1000.0020
ILE 1010.0015
MET 1020.0012
TYR 1030.0011
PHE 1040.0010
SER 1050.0010
HIS 1060.0012
PHE 1070.0010
VAL 1080.0011
PRO 1090.0011
VAL 1100.0011
PHE 1110.0011
LEU 1120.0014
PRO 1130.0024
ALA 1140.0034
SER 10.0033
GLN 20.0031
PHE 30.0026
ARG 40.0027
VAL 50.0023
SER 60.0025
PRO 70.0030
LEU 80.0037
ASP 90.0044
ARG 100.0043
THR 110.0046
TRP 120.0045
ASN 130.0052
LEU 140.0055
GLY 150.0052
GLU 160.0044
THR 170.0035
VAL 180.0029
GLU 190.0020
LEU 200.0017
LYS 210.0013
CYS 220.0015
GLN 230.0020
VAL 240.0022
LEU 250.0030
LEU 260.0032
SER 270.0040
ASN 280.0038
PRO 290.0030
THR 300.0029
SER 310.0026
GLY 320.0020
CYS 330.0013
SER 340.0010
TRP 350.0010
LEU 360.0011
PHE 370.0018
GLN 380.0022
PRO 390.0030
ARG 400.0036
GLY 410.0029
ALA 420.0023
ALA 430.0015
ALA 440.0017
SER 450.0012
PRO 460.0015
THR 470.0016
PHE 480.0013
LEU 490.0016
LEU 500.0015
TYR 510.0016
LEU 520.0018
SER 530.0023
GLN 540.0030
ASN 550.0033
LYS 560.0031
PRO 570.0025
LYS 580.0024
ALA 590.0024
ALA 600.0023
GLU 610.0026
GLY 620.0034
LEU 630.0032
ASP 640.0040
THR 650.0038
GLN 660.0043
ARG 670.0038
PHE 680.0030
SER 690.0025
GLY 700.0018
LYS 710.0016
ARG 720.0016
LEU 730.0015
GLY 740.0021
ASP 750.0021
THR 760.0015
PHE 770.0010
VAL 780.0009
LEU 790.0014
THR 800.0021
LEU 810.0029
SER 820.0036
ASP 830.0045
PHE 840.0043
ARG 850.0050
ARG 860.0054
GLU 870.0048
ASN 880.0039
GLU 890.0041
GLY 900.0035
TYR 910.0026
TYR 920.0019
PHE 930.0015
CYS 940.0012
SER 950.0013
ALA 960.0017
LEU 970.0021
SER 980.0026
ASN 990.0029
SER 1000.0024
ILE 1010.0023
MET 1020.0018
TYR 1030.0019
PHE 1040.0017
SER 1050.0020
HIS 1060.0027
PHE 1070.0026
VAL 1080.0027
PRO 1090.0034
VAL 1100.0034
PHE 1110.0045
LEU 1120.0054
PRO 1130.0061
ALA 1140.0068

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.