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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0829
MET 10.0003
SER 20.0003
THR 30.0003
ILE 40.0003
THR 50.0004
LYS 60.0005
ASP 70.0005
GLN 80.0004
ILE 90.0003
LEU 100.0004
GLU 110.0004
GLY 120.0003
VAL 130.0003
ALA 140.0006
ALA 150.0006
LEU 160.0006
SER 170.0010
VAL 180.0010
MET 190.0010
GLU 200.0007
ILE 210.0003
VAL 220.0005
GLU 230.0004
LEU 240.0003
ILE 250.0005
SER 260.0002
ALA 270.0006
MET 280.0009
GLU 290.0007
GLU 300.0005
LYS 310.0012
PHE 320.0014
GLY 330.0010
VAL 340.0016
SER 350.0017
ALA 360.0031
ALA 370.0033
ALA 380.0024
VAL 390.0028
ALA 400.0041
ALA 410.0036
GLY 420.0030
PRO 430.0028
ALA 440.0042
ALA 450.0036
ALA 460.0030
VAL 470.0037
GLU 480.0031
ALA 490.0021
ALA 500.0028
GLU 510.0027
GLU 520.0026
GLN 530.0023
THR 540.0029
GLU 550.0025
PHE 560.0020
ASP 570.0015
VAL 580.0017
VAL 590.0017
LEU 600.0020
ALA 610.0023
SER 620.0030
PHE 630.0033
GLY 640.0042
GLU 650.0049
ASN 660.0046
LYS 670.0040
VAL 680.0039
ALA 690.0039
VAL 700.0033
ILE 710.0029
LYS 720.0030
ALA 730.0029
VAL 740.0021
ARG 750.0018
GLY 760.0021
ALA 770.0019
THR 780.0011
GLY 790.0008
LEU 800.0009
GLY 810.0017
LEU 820.0025
LYS 830.0027
GLU 840.0020
ALA 850.0019
LYS 860.0027
ASP 870.0025
LEU 880.0018
VAL 890.0023
GLU 900.0027
SER 910.0019
ALA 920.0018
PRO 930.0014
ALA 940.0011
VAL 950.0007
LEU 960.0012
LYS 970.0012
GLU 980.0012
GLY 990.0018
VAL 1000.0022
ASN 1010.0029
LYS 1020.0033
ASP 1030.0036
GLU 1040.0030
ALA 1050.0028
GLU 1060.0035
THR 1070.0034
LEU 1080.0028
LYS 1090.0032
LYS 1100.0038
SER 1110.0034
LEU 1120.0032
GLU 1130.0039
GLU 1140.0043
ALA 1150.0039
GLY 1160.0042
ALA 1170.0035
SER 1180.0033
VAL 1190.0028
GLU 1200.0026
ILE 1210.0023
LYS 1220.0020
GLU 1230.0021
ALA 1240.0017
ALA 1250.0015
ALA 1260.0014
LYS 1270.0022
ALA 1280.0017
TYR 1290.0025
LYS 1300.0023
ILE 1310.0034
ILE 1320.0037
SER 1330.0040
LEU 1340.0043
LYS 1350.0046
TYR 1360.0045
THR 1370.0040
ARG 1380.0033
LYS 1390.0029
VAL 1400.0024
CYS 1410.0027
ILE 1420.0032
GLY 1430.0039
PRO 1440.0064
GLY 1450.0083
PRO 1460.0090
GLY 1470.0123
LYS 1480.0131
ALA 1490.0127
TYR 1500.0095
LYS 1510.0091
ILE 1520.0071
ILE 1530.0057
SER 1540.0050
LEU 1550.0032
LYS 1560.0040
TYR 1570.0035
THR 1580.0050
ARG 1590.0055
LYS 1600.0071
VAL 1610.0077
CYS 1620.0095
GLY 1630.0106
PRO 1640.0125
GLY 1650.0139
PRO 1660.0159
GLY 1670.0161
GLY 1680.0147
LYS 1690.0133
ALA 1700.0115
TYR 1710.0104
LYS 1720.0083
ILE 1730.0074
ILE 1740.0053
SER 1750.0051
LEU 1760.0033
LYS 1770.0057
TYR 1780.0061
THR 1790.0085
ARG 1800.0098
LYS 1810.0116
VAL 1820.0131
GLY 1830.0138
PRO 1840.0132
GLY 1850.0099
PRO 1860.0048
GLY 1870.0043
ILE 1880.0034
ILE 1890.0024
SER 1900.0033
LEU 1910.0027
LYS 1920.0035
TYR 1930.0037
THR 1940.0046
ARG 1950.0049
LYS 1960.0048
VAL 1970.0045
CYS 1980.0041
ILE 1990.0038
GLN 2000.0036
LEU 2010.0017
GLY 2020.0021
GLY 2030.0022
PRO 2040.0021
GLY 2050.0023
PRO 2060.0018
GLY 2070.0017
ASN 2080.0017
ILE 2090.0017
LYS 2100.0017
THR 2110.0017
ALA 2120.0018
PHE 2130.0018
HIS 2140.0017
CYS 2150.0017
TYR 2160.0019
ALA 2170.0022
ALA 2180.0016
TYR 2190.0009
MET 2200.0014
THR 2210.0021
SER 2220.0015
ILE 2230.0025
LYS 2240.0035
ALA 2250.0047
CYS 2260.0093
ASP 2270.0123
LEU 2280.0139
LYS 2290.0174
LYS 2300.0196
PRO 2310.0233
LEU 2320.0199
MET 2330.0207
GLU 2340.0231
SER 2350.0217
GLY 2360.0304
TRP 2370.0335
SER 2380.0364
ASP 2390.0394
THR 2400.0438
ALA 2410.0439
HIS 2420.0532
GLY 2430.0440
LYS 2440.0249
LYS 2450.0306
SER 2460.0358
LEU 2470.0252
PRO 2480.0200
SER 2490.0215
SER 2500.0196
SER 2510.0224
SER 2520.0218
TYR 2530.0182
SER 2540.0201
TYR 2550.0187
ARG 2560.0081
ARG 2570.0061
LYS 2580.0099
LEU 2590.0186
THR 2600.0252
ASN 2610.0362
PRO 2620.0558
ALA 2630.0481
ASN 2640.0409
LYS 2650.0204
GLU 2660.0148
GLU 2670.0142
SER 2680.0253
ILE 2690.0316
LYS 2700.0485
LYS 2710.0359
GLN 2720.0328
LYS 2730.0254
TYR 2740.0294
SER 2750.0328
TYR 2760.0551
PRO 2770.0641
TRP 2780.0724
GLN 2790.0599
THR 2800.0640
SER 2810.0829
LYS 2820.0189
CYS 2830.0256
PHE 2840.0696
ASP 2880.0478
TYR 2890.0210
GLN 2900.0217
TYR 2910.0134
CYS 2970.0065
ASN 2980.0065
PRO 2990.0058
GLY 3000.0057
LYS 3010.0062
LYS 3020.0059
ASN 3030.0054
THR 3040.0054
ILE 3050.0054
SER 3060.0051
GLY 3070.0051
TYR 3080.0053
LYS 3090.0053
ARG 3100.0050
MET 3110.0050
MET 3120.0049
ALA 3130.0048
THR 3140.0045
LYS 3150.0047
ASP 3160.0046
SER 3170.0042
PHE 3180.0039
GLN 3190.0039
SER 3200.0033
PHE 3210.0034
ASN 3220.0023
LEU 3230.0026
THR 3240.0030
GLU 3250.0032
PRO 3260.0029
HIS 3270.0027
ILE 3280.0019
THR 3290.0019
THR 3300.0019
ASN 3310.0031
LYS 3320.0041
LEU 3330.0037
GLU 3340.0042
TRP 3350.0040
ILE 3360.0046
ASP 3370.0039
PRO 3380.0044
ASP 3390.0053
GLY 3400.0057
ASN 3410.0061
THR 3420.0077
ARG 3430.0107
GLY 3440.0170
GLY 3450.0247
GLY 3460.0307
GLY 10.0022
SER 20.0020
HIS 30.0018
SER 40.0016
MET 50.0015
ARG 60.0013
TYR 70.0013
PHE 80.0012
PHE 90.0013
THR 100.0013
SER 110.0014
VAL 120.0014
SER 130.0014
ARG 140.0014
PRO 150.0015
GLY 160.0014
ARG 170.0014
GLY 180.0013
GLU 190.0014
PRO 200.0015
ARG 210.0015
PHE 220.0014
ILE 230.0012
ALA 240.0011
VAL 250.0010
GLY 260.0011
TYR 270.0012
VAL 280.0014
ASP 290.0014
ASP 300.0013
THR 310.0012
GLN 320.0011
PHE 330.0011
VAL 340.0010
ARG 350.0010
PHE 360.0011
ASP 370.0012
SER 380.0014
ASP 390.0015
ALA 400.0014
ALA 410.0015
SER 420.0013
GLN 430.0013
ARG 440.0012
MET 450.0011
GLU 460.0010
PRO 470.0010
ARG 480.0010
ALA 490.0012
PRO 500.0014
TRP 510.0015
ILE 520.0013
GLU 530.0012
GLN 540.0014
GLU 550.0014
GLY 560.0013
PRO 570.0012
GLU 580.0014
TYR 590.0014
TRP 600.0012
ASP 610.0013
GLY 620.0015
GLU 630.0013
THR 640.0013
ARG 650.0015
LYS 660.0015
VAL 670.0013
LYS 680.0015
ALA 690.0017
HIS 700.0016
SER 710.0015
GLN 720.0016
THR 730.0016
HIS 740.0016
ARG 750.0016
VAL 760.0015
ASP 770.0014
LEU 780.0015
GLY 790.0015
THR 800.0014
LEU 810.0013
ARG 820.0012
GLY 830.0011
TYR 840.0012
TYR 850.0013
ASN 860.0011
GLN 870.0010
SER 880.0009
GLU 890.0008
ALA 900.0011
GLY 910.0014
SER 920.0014
HIS 930.0014
THR 940.0015
VAL 950.0015
GLN 960.0014
ARG 970.0015
MET 980.0014
TYR 990.0015
GLY 1000.0016
CYS 1010.0018
ASP 1020.0018
VAL 1030.0021
GLY 1040.0023
SER 1050.0024
ASP 1060.0026
TRP 1070.0024
ARG 1080.0025
PHE 1090.0024
LEU 1100.0023
ARG 1110.0020
GLY 1120.0019
TYR 1130.0017
HIS 1140.0017
GLN 1150.0016
TYR 1160.0016
ALA 1170.0016
TYR 1180.0016
ASP 1190.0015
GLY 1200.0015
LYS 1210.0015
ASP 1220.0015
TYR 1230.0017
ILE 1240.0017
ALA 1250.0017
LEU 1260.0018
LYS 1270.0019
GLU 1280.0018
ASP 1290.0021
LEU 1300.0021
ARG 1310.0022
SER 1320.0022
TRP 1330.0020
THR 1340.0019
ALA 1350.0020
ALA 1360.0018
ASP 1370.0018
MET 1380.0018
ALA 1390.0017
ALA 1400.0017
GLN 1410.0020
THR 1420.0021
THR 1430.0019
LYS 1440.0020
HIS 1450.0022
LYS 1460.0023
TRP 1470.0021
GLU 1480.0023
ALA 1490.0024
ALA 1500.0023
HIS 1510.0024
VAL 1520.0022
ALA 1530.0022
GLU 1540.0023
GLN 1550.0022
LEU 1560.0021
ARG 1570.0023
ALA 1580.0023
TYR 1590.0021
LEU 1600.0020
GLU 1610.0023
GLY 1620.0023
THR 1630.0021
CYS 1640.0019
VAL 1650.0020
GLU 1660.0022
TRP 1670.0019
LEU 1680.0018
ARG 1690.0021
ARG 1700.0020
TYR 1710.0018
LEU 1720.0019
GLU 1730.0021
ASN 1740.0019
GLY 1750.0018
LYS 1760.0021
GLU 1770.0021
THR 1780.0018
LEU 1790.0018
GLN 1800.0021
ARG 1810.0022
THR 1820.0022
ASP 1830.0022
ALA 1840.0023
PRO 1850.0022
LYS 1860.0025
THR 1870.0026
HIS 1880.0029
MET 1890.0030
THR 1900.0032
HIS 1910.0036
HIS 1920.0038
ALA 1930.0042
VAL 1940.0041
SER 1950.0047
ASP 1960.0052
HIS 1970.0047
GLU 1980.0040
ALA 1990.0038
THR 2000.0032
LEU 2010.0030
ARG 2020.0027
CYS 2030.0024
TRP 2040.0023
ALA 2050.0020
LEU 2060.0021
SER 2070.0021
PHE 2080.0019
TYR 2090.0017
PRO 2100.0016
ALA 2110.0013
GLU 2120.0014
ILE 2130.0014
THR 2140.0014
LEU 2150.0015
THR 2160.0017
TRP 2170.0020
GLN 2180.0022
ARG 2190.0024
ASP 2200.0027
GLY 2210.0024
GLU 2220.0019
ASP 2230.0015
GLN 2240.0015
THR 2250.0011
GLN 2260.0012
ASP 2270.0016
THR 2280.0016
GLU 2290.0017
LEU 2300.0015
VAL 2310.0013
GLU 2320.0012
THR 2330.0012
ARG 2340.0012
PRO 2350.0013
ALA 2360.0017
GLY 2370.0016
ASP 2380.0017
GLY 2390.0015
THR 2400.0017
PHE 2410.0015
GLN 2420.0016
LYS 2430.0016
TRP 2440.0018
ALA 2450.0018
ALA 2460.0023
VAL 2470.0024
VAL 2480.0029
VAL 2490.0032
PRO 2500.0036
SER 2510.0042
GLY 2520.0043
GLN 2530.0037
GLU 2540.0037
GLN 2550.0038
ARG 2560.0033
TYR 2570.0029
THR 2580.0028
CYS 2590.0025
HIS 2600.0022
VAL 2610.0020
GLN 2620.0019
HIS 2630.0020
GLU 2640.0022
GLY 2650.0024
LEU 2660.0027
PRO 2670.0031
LYS 2680.0030
PRO 2690.0026
LEU 2700.0028
THR 2710.0030
LEU 2720.0031
ARG 2730.0035
TRP 2740.0036
GLU 2750.0041
PRO 2760.0044
GLN 2780.0016
ARG 2790.0014
THR 2800.0012
PRO 2810.0010
LYS 2820.0009
ILE 2830.0012
GLN 2840.0013
VAL 2850.0017
TYR 2860.0019
SER 2870.0022
ARG 2880.0022
HIS 2890.0025
PRO 2900.0028
ALA 2910.0030
GLU 2920.0034
ASN 2930.0036
GLY 2940.0038
LYS 2950.0035
SER 2960.0032
ASN 2970.0028
PHE 2980.0024
LEU 2990.0022
ASN 3000.0018
CYS 3010.0015
TYR 3020.0012
VAL 3030.0009
SER 3040.0009
GLY 3050.0011
PHE 3060.0011
HIS 3070.0013
PRO 3080.0013
SER 3090.0010
ASP 3100.0011
ILE 3110.0011
GLU 3120.0013
VAL 3130.0016
ASP 3140.0019
LEU 3150.0021
LEU 3160.0024
LYS 3170.0029
ASN 3180.0031
GLY 3190.0029
GLU 3200.0031
ARG 3210.0028
ILE 3220.0028
GLU 3230.0029
LYS 3240.0026
VAL 3250.0022
GLU 3260.0018
HIS 3270.0014
SER 3280.0010
ASP 3290.0009
LEU 3300.0010
SER 3310.0009
PHE 3320.0010
SER 3330.0012
LYS 3340.0012
ASP 3350.0013
TRP 3360.0013
SER 3370.0012
PHE 3380.0010
TYR 3390.0009
LEU 3400.0010
LEU 3410.0012
TYR 3420.0015
TYR 3430.0019
THR 3440.0023
GLU 3450.0026
PHE 3460.0029
THR 3470.0033
PRO 3480.0032
THR 3490.0035
GLU 3500.0036
LYS 3510.0036
ASP 3520.0034
GLU 3530.0028
TYR 3540.0025
ALA 3550.0020
CYS 3560.0017
ARG 3570.0017
VAL 3580.0011
ASN 3590.0012
HIS 3600.0012
VAL 3610.0014
THR 3620.0015
LEU 3630.0016
SER 3640.0020
GLN 3650.0018
PRO 3660.0014
LYS 3670.0013
ILE 3680.0017
VAL 3690.0016
LYS 3700.0020
TRP 3710.0021
ASP 3720.0022
ARG 3730.0026
ASP 3740.0027
MET 3750.0025
SER 10.0015
GLN 20.0014
PHE 30.0014
ARG 40.0015
VAL 50.0014
SER 60.0017
PRO 70.0016
LEU 80.0014
ASP 90.0014
ARG 100.0013
THR 110.0014
TRP 120.0016
ASN 130.0017
LEU 140.0017
GLY 150.0019
GLU 160.0013
THR 170.0014
VAL 180.0012
GLU 190.0015
LEU 200.0014
LYS 210.0012
CYS 220.0012
GLN 230.0013
VAL 240.0013
LEU 250.0014
LEU 260.0012
SER 270.0010
ASN 280.0009
PRO 290.0008
THR 300.0008
SER 310.0010
GLY 320.0010
CYS 330.0010
SER 340.0010
TRP 350.0012
LEU 360.0013
PHE 370.0013
GLN 380.0013
PRO 390.0014
ARG 400.0014
GLY 410.0023
ALA 420.0026
ALA 430.0025
ALA 440.0022
SER 450.0020
PRO 460.0015
THR 470.0015
PHE 480.0014
LEU 490.0014
LEU 500.0013
TYR 510.0011
LEU 520.0011
SER 530.0010
GLN 540.0011
ASN 550.0013
LYS 560.0014
PRO 570.0013
LYS 580.0014
ALA 590.0015
ALA 600.0015
GLU 610.0017
GLY 620.0015
LEU 630.0012
ASP 640.0010
THR 650.0012
GLN 660.0010
ARG 670.0009
PHE 680.0010
SER 690.0011
GLY 700.0011
LYS 710.0010
ARG 720.0011
LEU 730.0012
GLY 740.0013
ASP 750.0013
THR 760.0014
PHE 770.0013
VAL 780.0012
LEU 790.0011
THR 800.0011
LEU 810.0011
SER 820.0012
ASP 830.0011
PHE 840.0011
ARG 850.0010
ARG 860.0011
GLU 870.0007
ASN 880.0010
GLU 890.0009
GLY 900.0010
TYR 910.0013
TYR 920.0012
PHE 930.0012
CYS 940.0012
SER 950.0012
ALA 960.0009
LEU 970.0010
SER 980.0012
ASN 990.0015
SER 1000.0015
ILE 1010.0014
MET 1020.0012
TYR 1030.0012
PHE 1040.0013
SER 1050.0015
HIS 1060.0015
PHE 1070.0014
VAL 1080.0014
PRO 1090.0013
VAL 1100.0013
PHE 1110.0010
LEU 1120.0014
PRO 1130.0020
ALA 1140.0022
SER 10.0022
GLN 20.0018
PHE 30.0017
ARG 40.0019
VAL 50.0021
SER 60.0025
PRO 70.0030
LEU 80.0033
ASP 90.0039
ARG 100.0041
THR 110.0044
TRP 120.0045
ASN 130.0051
LEU 140.0053
GLY 150.0052
GLU 160.0046
THR 170.0040
VAL 180.0035
GLU 190.0029
LEU 200.0024
LYS 210.0019
CYS 220.0016
GLN 230.0013
VAL 240.0012
LEU 250.0015
LEU 260.0016
SER 270.0019
ASN 280.0018
PRO 290.0013
THR 300.0014
SER 310.0013
GLY 320.0012
CYS 330.0012
SER 340.0013
TRP 350.0017
LEU 360.0017
PHE 370.0021
GLN 380.0023
PRO 390.0028
ARG 400.0032
GLY 410.0023
ALA 420.0021
ALA 430.0017
ALA 440.0018
SER 450.0015
PRO 460.0019
THR 470.0019
PHE 480.0017
LEU 490.0020
LEU 500.0018
TYR 510.0017
LEU 520.0017
SER 530.0017
GLN 540.0021
ASN 550.0025
LYS 560.0026
PRO 570.0023
LYS 580.0022
ALA 590.0024
ALA 600.0023
GLU 610.0025
GLY 620.0032
LEU 630.0033
ASP 640.0040
THR 650.0038
GLN 660.0043
ARG 670.0040
PHE 680.0034
SER 690.0030
GLY 700.0024
LYS 710.0021
ARG 720.0016
LEU 730.0015
GLY 740.0012
ASP 750.0010
THR 760.0012
PHE 770.0015
VAL 780.0020
LEU 790.0024
THR 800.0029
LEU 810.0035
SER 820.0041
ASP 830.0046
PHE 840.0044
ARG 850.0048
ARG 860.0049
GLU 870.0045
ASN 880.0038
GLU 890.0039
GLY 900.0034
TYR 910.0027
TYR 920.0023
PHE 930.0019
CYS 940.0014
SER 950.0012
ALA 960.0011
LEU 970.0011
SER 980.0013
ASN 990.0015
SER 1000.0013
ILE 1010.0014
MET 1020.0012
TYR 1030.0013
PHE 1040.0015
SER 1050.0016
HIS 1060.0023
PHE 1070.0025
VAL 1080.0027
PRO 1090.0032
VAL 1100.0034
PHE 1110.0042
LEU 1120.0049
PRO 1130.0054
ALA 1140.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.