CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0819
MET 10.0040
SER 20.0037
THR 30.0033
ILE 40.0029
THR 50.0043
LYS 60.0050
ASP 70.0057
GLN 80.0044
ILE 90.0039
LEU 100.0053
GLU 110.0051
GLY 120.0043
VAL 130.0048
ALA 140.0068
ALA 150.0070
LEU 160.0084
SER 170.0127
VAL 180.0132
MET 190.0134
GLU 200.0097
ILE 210.0058
VAL 220.0083
GLU 230.0073
LEU 240.0046
ILE 250.0049
SER 260.0046
ALA 270.0086
MET 280.0101
GLU 290.0065
GLU 300.0056
LYS 310.0134
PHE 320.0150
GLY 330.0088
VAL 340.0174
SER 350.0195
ALA 360.0374
ALA 370.0390
ALA 380.0250
VAL 390.0304
ALA 400.0442
ALA 410.0340
GLY 420.0225
PRO 430.0269
ALA 440.0408
ALA 450.0354
ALA 460.0275
VAL 470.0347
GLU 480.0312
ALA 490.0198
ALA 500.0188
GLU 510.0186
GLU 520.0158
GLN 530.0121
THR 540.0146
GLU 550.0113
PHE 560.0096
ASP 570.0091
VAL 580.0101
VAL 590.0098
LEU 600.0111
ALA 610.0110
SER 620.0135
PHE 630.0153
GLY 640.0185
GLU 650.0214
ASN 660.0213
LYS 670.0192
VAL 680.0207
ALA 690.0209
VAL 700.0179
ILE 710.0172
LYS 720.0192
ALA 730.0183
VAL 740.0158
ARG 750.0170
GLY 760.0184
ALA 770.0166
THR 780.0153
GLY 790.0170
LEU 800.0154
GLY 810.0164
LEU 820.0169
LYS 830.0149
GLU 840.0132
ALA 850.0142
LYS 860.0142
ASP 870.0120
LEU 880.0111
VAL 890.0124
GLU 900.0125
SER 910.0094
ALA 920.0091
PRO 930.0084
ALA 940.0085
VAL 950.0087
LEU 960.0108
LYS 970.0106
GLU 980.0097
GLY 990.0105
VAL 1000.0119
ASN 1010.0142
LYS 1020.0141
ASP 1030.0164
GLU 1040.0159
ALA 1050.0140
GLU 1060.0151
THR 1070.0172
LEU 1080.0159
LYS 1090.0152
LYS 1100.0176
SER 1110.0185
LEU 1120.0169
GLU 1130.0175
GLU 1140.0201
ALA 1150.0199
GLY 1160.0189
ALA 1170.0164
SER 1180.0145
VAL 1190.0128
GLU 1200.0108
ILE 1210.0107
LYS 1220.0083
GLU 1230.0073
ALA 1240.0065
ALA 1250.0047
ALA 1260.0038
LYS 1270.0049
ALA 1280.0042
TYR 1290.0053
LYS 1300.0058
ILE 1310.0089
ILE 1320.0100
SER 1330.0102
LEU 1340.0114
LYS 1350.0118
TYR 1360.0145
THR 1370.0127
ARG 1380.0096
LYS 1390.0089
VAL 1400.0062
CYS 1410.0099
ILE 1420.0107
GLY 1430.0176
PRO 1440.0218
GLY 1450.0290
PRO 1460.0357
GLY 1470.0340
LYS 1480.0256
ALA 1490.0193
TYR 1500.0125
LYS 1510.0084
ILE 1520.0092
ILE 1530.0076
SER 1540.0107
LEU 1550.0114
LYS 1560.0131
TYR 1570.0129
THR 1580.0118
ARG 1590.0118
LYS 1600.0106
VAL 1610.0108
CYS 1620.0076
GLY 1630.0109
PRO 1640.0154
GLY 1650.0152
PRO 1660.0217
GLY 1670.0248
GLY 1680.0236
LYS 1690.0205
ALA 1700.0168
TYR 1710.0120
LYS 1720.0124
ILE 1730.0101
ILE 1740.0127
SER 1750.0125
LEU 1760.0141
LYS 1770.0137
TYR 1780.0115
THR 1790.0115
ARG 1800.0098
LYS 1810.0123
VAL 1820.0119
GLY 1830.0169
PRO 1840.0209
GLY 1850.0225
PRO 1860.0188
GLY 1870.0133
ILE 1880.0121
ILE 1890.0078
SER 1900.0117
LEU 1910.0115
LYS 1920.0118
TYR 1930.0120
THR 1940.0123
ARG 1950.0126
LYS 1960.0107
VAL 1970.0107
CYS 1980.0093
ILE 1990.0094
GLN 2000.0086
LEU 2010.0065
GLY 2020.0061
GLY 2030.0054
PRO 2040.0046
GLY 2050.0045
PRO 2060.0038
GLY 2070.0037
ASN 2080.0042
ILE 2090.0042
LYS 2100.0036
THR 2110.0032
ALA 2120.0041
PHE 2130.0036
HIS 2140.0027
CYS 2150.0035
TYR 2160.0051
ALA 2170.0030
ALA 2180.0031
TYR 2190.0048
MET 2200.0039
THR 2210.0026
SER 2220.0051
ILE 2230.0047
LYS 2240.0058
ALA 2250.0050
CYS 2260.0090
ASP 2270.0078
LEU 2280.0044
LYS 2290.0055
LYS 2300.0065
PRO 2310.0099
LEU 2320.0097
MET 2330.0103
GLU 2340.0104
SER 2350.0098
GLY 2360.0096
TRP 2370.0113
SER 2380.0132
ASP 2390.0148
THR 2400.0163
ALA 2410.0165
HIS 2420.0150
GLY 2430.0147
LYS 2440.0100
LYS 2450.0088
SER 2460.0103
LEU 2470.0082
PRO 2480.0110
SER 2490.0167
SER 2500.0151
SER 2510.0093
SER 2520.0059
TYR 2530.0032
SER 2540.0018
TYR 2550.0059
ARG 2560.0070
ARG 2570.0076
LYS 2580.0094
LEU 2590.0085
THR 2600.0107
ASN 2610.0086
PRO 2620.0118
ALA 2630.0098
ASN 2640.0132
LYS 2650.0109
GLU 2660.0106
GLU 2670.0075
SER 2680.0079
ILE 2690.0042
LYS 2700.0056
LYS 2710.0042
GLN 2720.0033
LYS 2730.0033
TYR 2740.0025
SER 2750.0025
TYR 2760.0050
PRO 2770.0071
TRP 2780.0083
GLN 2790.0101
THR 2800.0122
SER 2810.0116
LYS 2820.0099
CYS 2830.0133
PHE 2840.0118
ASP 2880.0206
TYR 2890.0119
GLN 2900.0170
TYR 2910.0240
CYS 2970.0747
ASN 2980.0522
PRO 2990.0423
GLY 3000.0372
LYS 3010.0443
LYS 3020.0456
ASN 3030.0373
THR 3040.0331
ILE 3050.0337
SER 3060.0356
GLY 3070.0345
TYR 3080.0356
LYS 3090.0331
ARG 3100.0313
MET 3110.0326
MET 3120.0326
ALA 3130.0322
THR 3140.0305
LYS 3150.0317
ASP 3160.0321
SER 3170.0295
PHE 3180.0239
GLN 3190.0209
SER 3200.0153
PHE 3210.0125
ASN 3220.0073
LEU 3230.0062
THR 3240.0071
GLU 3250.0071
PRO 3260.0051
HIS 3270.0063
ILE 3280.0049
THR 3290.0068
THR 3300.0068
ASN 3310.0048
LYS 3320.0047
LEU 3330.0040
GLU 3340.0071
TRP 3350.0075
ILE 3360.0103
ASP 3370.0111
PRO 3380.0141
ASP 3390.0170
GLY 3400.0177
ASN 3410.0188
THR 3420.0170
ARG 3430.0138
GLY 3440.0393
GLY 3450.0597
GLY 3460.0819
GLY 10.0051
SER 20.0045
HIS 30.0038
SER 40.0033
MET 50.0032
ARG 60.0028
TYR 70.0030
PHE 80.0030
PHE 90.0037
THR 100.0040
SER 110.0043
VAL 120.0044
SER 130.0046
ARG 140.0047
PRO 150.0050
GLY 160.0053
ARG 170.0048
GLY 180.0044
GLU 190.0046
PRO 200.0048
ARG 210.0051
PHE 220.0046
ILE 230.0039
ALA 240.0035
VAL 250.0028
GLY 260.0027
TYR 270.0023
VAL 280.0026
ASP 290.0026
ASP 300.0021
THR 310.0020
GLN 320.0019
PHE 330.0021
VAL 340.0026
ARG 350.0031
PHE 360.0039
ASP 370.0044
SER 380.0051
ASP 390.0054
ALA 400.0051
ALA 410.0057
SER 420.0050
GLN 430.0053
ARG 440.0046
MET 450.0039
GLU 460.0033
PRO 470.0024
ARG 480.0020
ALA 490.0018
PRO 500.0019
TRP 510.0025
ILE 520.0025
GLU 530.0022
GLN 540.0027
GLU 550.0034
GLY 560.0040
PRO 570.0044
GLU 580.0052
TYR 590.0046
TRP 600.0043
ASP 610.0052
GLY 620.0053
GLU 630.0046
THR 640.0050
ARG 650.0058
LYS 660.0052
VAL 670.0047
LYS 680.0055
ALA 690.0058
HIS 700.0050
SER 710.0050
GLN 720.0054
THR 730.0052
HIS 740.0049
ARG 750.0054
VAL 760.0051
ASP 770.0047
LEU 780.0048
GLY 790.0052
THR 800.0050
LEU 810.0044
ARG 820.0044
GLY 830.0049
TYR 840.0052
TYR 850.0053
ASN 860.0045
GLN 870.0038
SER 880.0027
GLU 890.0016
ALA 900.0029
GLY 910.0045
SER 920.0042
HIS 930.0043
THR 940.0042
VAL 950.0042
GLN 960.0040
ARG 970.0039
MET 980.0033
TYR 990.0036
GLY 1000.0035
CYS 1010.0041
ASP 1020.0040
VAL 1030.0048
GLY 1040.0052
SER 1050.0057
ASP 1060.0065
TRP 1070.0057
ARG 1080.0061
PHE 1090.0057
LEU 1100.0051
ARG 1110.0044
GLY 1120.0043
TYR 1130.0039
HIS 1140.0042
GLN 1150.0039
TYR 1160.0040
ALA 1170.0040
TYR 1180.0044
ASP 1190.0043
GLY 1200.0038
LYS 1210.0038
ASP 1220.0039
TYR 1230.0045
ILE 1240.0045
ALA 1250.0042
LEU 1260.0046
LYS 1270.0043
GLU 1280.0040
ASP 1290.0050
LEU 1300.0053
ARG 1310.0058
SER 1320.0055
TRP 1330.0052
THR 1340.0046
ALA 1350.0051
ALA 1360.0046
ASP 1370.0052
MET 1380.0061
ALA 1390.0060
ALA 1400.0054
GLN 1410.0060
THR 1420.0067
THR 1430.0061
LYS 1440.0060
HIS 1450.0068
LYS 1460.0072
TRP 1470.0067
GLU 1480.0069
ALA 1490.0078
ALA 1500.0076
HIS 1510.0075
VAL 1520.0068
ALA 1530.0063
GLU 1540.0069
GLN 1550.0069
LEU 1560.0061
ARG 1570.0061
ALA 1580.0067
TYR 1590.0060
LEU 1600.0053
GLU 1610.0060
GLY 1620.0063
THR 1630.0060
CYS 1640.0050
VAL 1650.0052
GLU 1660.0058
TRP 1670.0049
LEU 1680.0044
ARG 1690.0050
ARG 1700.0048
TYR 1710.0038
LEU 1720.0042
GLU 1730.0047
ASN 1740.0040
GLY 1750.0034
LYS 1760.0042
GLU 1770.0041
THR 1780.0033
LEU 1790.0034
GLN 1800.0044
ARG 1810.0047
THR 1820.0049
ASP 1830.0051
ALA 1840.0059
PRO 1850.0059
LYS 1860.0070
THR 1870.0076
HIS 1880.0086
MET 1890.0091
THR 1900.0097
HIS 1910.0111
HIS 1920.0117
ALA 1930.0129
VAL 1940.0124
SER 1950.0140
ASP 1960.0159
HIS 1970.0142
GLU 1980.0122
ALA 1990.0117
THR 2000.0099
LEU 2010.0094
ARG 2020.0082
CYS 2030.0074
TRP 2040.0067
ALA 2050.0057
LEU 2060.0055
SER 2070.0050
PHE 2080.0045
TYR 2090.0037
PRO 2100.0032
ALA 2110.0027
GLU 2120.0030
ILE 2130.0037
THR 2140.0041
LEU 2150.0049
THR 2160.0056
TRP 2170.0068
GLN 2180.0074
ARG 2190.0083
ASP 2200.0093
GLY 2210.0083
GLU 2220.0067
ASP 2230.0055
GLN 2240.0052
THR 2250.0036
GLN 2260.0035
ASP 2270.0050
THR 2280.0050
GLU 2290.0051
LEU 2300.0046
VAL 2310.0038
GLU 2320.0031
THR 2330.0028
ARG 2340.0032
PRO 2350.0030
ALA 2360.0043
GLY 2370.0039
ASP 2380.0036
GLY 2390.0026
THR 2400.0035
PHE 2410.0033
GLN 2420.0042
LYS 2430.0045
TRP 2440.0054
ALA 2450.0057
ALA 2460.0072
VAL 2470.0076
VAL 2480.0089
VAL 2490.0099
PRO 2500.0112
SER 2510.0132
GLY 2520.0137
GLN 2530.0121
GLU 2540.0118
GLN 2550.0125
ARG 2560.0109
TYR 2570.0097
THR 2580.0093
CYS 2590.0080
HIS 2600.0072
VAL 2610.0062
GLN 2620.0057
HIS 2630.0053
GLU 2640.0055
GLY 2650.0060
LEU 2660.0073
PRO 2670.0086
LYS 2680.0089
PRO 2690.0080
LEU 2700.0085
THR 2710.0094
LEU 2720.0099
ARG 2730.0111
TRP 2740.0114
GLU 2750.0131
PRO 2760.0141
GLN 2780.0042
ARG 2790.0038
THR 2800.0036
PRO 2810.0033
LYS 2820.0033
ILE 2830.0033
GLN 2840.0038
VAL 2850.0047
TYR 2860.0054
SER 2870.0062
ARG 2880.0059
HIS 2890.0069
PRO 2900.0078
ALA 2910.0085
GLU 2920.0096
ASN 2930.0104
GLY 2940.0108
LYS 2950.0100
SER 2960.0091
ASN 2970.0079
PHE 2980.0067
LEU 2990.0063
ASN 3000.0053
CYS 3010.0046
TYR 3020.0037
VAL 3030.0031
SER 3040.0030
GLY 3050.0032
PHE 3060.0033
HIS 3070.0035
PRO 3080.0038
SER 3090.0034
ASP 3100.0036
ILE 3110.0036
GLU 3120.0038
VAL 3130.0046
ASP 3140.0056
LEU 3150.0060
LEU 3160.0068
LYS 3170.0080
ASN 3180.0084
GLY 3190.0076
GLU 3200.0085
ARG 3210.0079
ILE 3220.0081
GLU 3230.0085
LYS 3240.0080
VAL 3250.0067
GLU 3260.0058
HIS 3270.0045
SER 3280.0032
ASP 3290.0031
LEU 3300.0032
SER 3310.0027
PHE 3320.0026
SER 3330.0023
LYS 3340.0023
ASP 3350.0027
TRP 3360.0031
SER 3370.0031
PHE 3380.0030
TYR 3390.0029
LEU 3400.0034
LEU 3410.0037
TYR 3420.0045
TYR 3430.0056
THR 3440.0068
GLU 3450.0076
PHE 3460.0084
THR 3470.0093
PRO 3480.0091
THR 3490.0102
GLU 3500.0105
LYS 3510.0104
ASP 3520.0095
GLU 3530.0079
TYR 3540.0069
ALA 3550.0055
CYS 3560.0045
ARG 3570.0044
VAL 3580.0034
ASN 3590.0032
HIS 3600.0033
VAL 3610.0036
THR 3620.0042
LEU 3630.0060
SER 3640.0078
GLN 3650.0070
PRO 3660.0054
LYS 3670.0060
ILE 3680.0040
VAL 3690.0037
LYS 3700.0052
TRP 3710.0059
ASP 3720.0066
ARG 3730.0075
ASP 3740.0079
MET 3750.0076
SER 10.0021
GLN 20.0017
PHE 30.0014
ARG 40.0015
VAL 50.0014
SER 60.0019
PRO 70.0017
LEU 80.0019
ASP 90.0019
ARG 100.0013
THR 110.0013
TRP 120.0019
ASN 130.0031
LEU 140.0039
GLY 150.0043
GLU 160.0022
THR 170.0018
VAL 180.0012
GLU 190.0016
LEU 200.0017
LYS 210.0011
CYS 220.0013
GLN 230.0013
VAL 240.0013
LEU 250.0015
LEU 260.0016
SER 270.0017
ASN 280.0023
PRO 290.0021
THR 300.0030
SER 310.0024
GLY 320.0023
CYS 330.0018
SER 340.0016
TRP 350.0017
LEU 360.0017
PHE 370.0021
GLN 380.0019
PRO 390.0023
ARG 400.0021
GLY 410.0044
ALA 420.0044
ALA 430.0061
ALA 440.0047
SER 450.0047
PRO 460.0026
THR 470.0028
PHE 480.0026
LEU 490.0030
LEU 500.0029
TYR 510.0027
LEU 520.0029
SER 530.0031
GLN 540.0038
ASN 550.0041
LYS 560.0046
PRO 570.0040
LYS 580.0039
ALA 590.0039
ALA 600.0038
GLU 610.0054
GLY 620.0043
LEU 630.0030
ASP 640.0018
THR 650.0027
GLN 660.0018
ARG 670.0012
PHE 680.0011
SER 690.0016
GLY 700.0017
LYS 710.0015
ARG 720.0017
LEU 730.0017
GLY 740.0019
ASP 750.0018
THR 760.0017
PHE 770.0016
VAL 780.0014
LEU 790.0013
THR 800.0012
LEU 810.0014
SER 820.0017
ASP 830.0020
PHE 840.0016
ARG 850.0019
ARG 860.0034
GLU 870.0026
ASN 880.0012
GLU 890.0014
GLY 900.0026
TYR 910.0017
TYR 920.0016
PHE 930.0014
CYS 940.0012
SER 950.0010
ALA 960.0017
LEU 970.0026
SER 980.0034
ASN 990.0043
SER 1000.0038
ILE 1010.0034
MET 1020.0023
TYR 1030.0021
PHE 1040.0015
SER 1050.0013
HIS 1060.0015
PHE 1070.0015
VAL 1080.0014
PRO 1090.0016
VAL 1100.0014
PHE 1110.0011
LEU 1120.0019
PRO 1130.0015
ALA 1140.0019
SER 10.0088
GLN 20.0078
PHE 30.0075
ARG 40.0091
VAL 50.0092
SER 60.0117
PRO 70.0135
LEU 80.0142
ASP 90.0169
ARG 100.0170
THR 110.0174
TRP 120.0177
ASN 130.0197
LEU 140.0201
GLY 150.0200
GLU 160.0184
THR 170.0160
VAL 180.0139
GLU 190.0120
LEU 200.0101
LYS 210.0084
CYS 220.0071
GLN 230.0070
VAL 240.0057
LEU 250.0076
LEU 260.0066
SER 270.0078
ASN 280.0064
PRO 290.0044
THR 300.0029
SER 310.0029
GLY 320.0014
CYS 330.0018
SER 340.0025
TRP 350.0045
LEU 360.0043
PHE 370.0057
GLN 380.0053
PRO 390.0071
ARG 400.0079
GLY 410.0033
ALA 420.0029
ALA 430.0025
ALA 440.0017
SER 450.0016
PRO 460.0032
THR 470.0042
PHE 480.0040
LEU 490.0054
LEU 500.0048
TYR 510.0035
LEU 520.0032
SER 530.0026
GLN 540.0038
ASN 550.0057
LYS 560.0064
PRO 570.0057
LYS 580.0059
ALA 590.0067
ALA 600.0064
GLU 610.0089
GLY 620.0108
LEU 630.0103
ASP 640.0125
THR 650.0119
GLN 660.0140
ARG 670.0135
PHE 680.0110
SER 690.0093
GLY 700.0071
LYS 710.0059
ARG 720.0041
LEU 730.0050
GLY 740.0043
ASP 750.0049
THR 760.0060
PHE 770.0053
VAL 780.0073
LEU 790.0082
THR 800.0105
LEU 810.0124
SER 820.0150
ASP 830.0173
PHE 840.0163
ARG 850.0172
ARG 860.0170
GLU 870.0147
ASN 880.0128
GLU 890.0129
GLY 900.0103
TYR 910.0079
TYR 920.0071
PHE 930.0057
CYS 940.0043
SER 950.0026
ALA 960.0023
LEU 970.0028
SER 980.0041
ASN 990.0051
SER 1000.0044
ILE 1010.0044
MET 1020.0030
TYR 1030.0037
PHE 1040.0040
SER 1050.0053
HIS 1060.0080
PHE 1070.0081
VAL 1080.0098
PRO 1090.0112
VAL 1100.0122
PHE 1110.0148
LEU 1120.0180
PRO 1130.0204
ALA 1140.0209

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.