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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0795
MET 10.0073
SER 20.0039
THR 30.0046
ILE 40.0032
THR 50.0068
LYS 60.0077
ASP 70.0086
GLN 80.0057
ILE 90.0037
LEU 100.0063
GLU 110.0061
GLY 120.0042
VAL 130.0029
ALA 140.0036
ALA 150.0027
LEU 160.0025
SER 170.0044
VAL 180.0050
MET 190.0053
GLU 200.0036
ILE 210.0021
VAL 220.0024
GLU 230.0024
LEU 240.0017
ILE 250.0015
SER 260.0029
ALA 270.0040
MET 280.0034
GLU 290.0051
GLU 300.0067
LYS 310.0066
PHE 320.0072
GLY 330.0094
VAL 340.0090
SER 350.0081
ALA 360.0093
ALA 370.0084
ALA 380.0102
VAL 390.0113
ALA 400.0101
ALA 410.0090
GLY 420.0106
PRO 430.0142
ALA 440.0141
ALA 450.0115
ALA 460.0135
VAL 470.0145
GLU 480.0122
ALA 490.0124
ALA 500.0145
GLU 510.0137
GLU 520.0141
GLN 530.0127
THR 540.0145
GLU 550.0134
PHE 560.0118
ASP 570.0104
VAL 580.0090
VAL 590.0074
LEU 600.0065
ALA 610.0051
SER 620.0063
PHE 630.0086
GLY 640.0104
GLU 650.0137
ASN 660.0139
LYS 670.0138
VAL 680.0162
ALA 690.0142
VAL 700.0116
ILE 710.0140
LYS 720.0152
ALA 730.0122
VAL 740.0126
ARG 750.0160
GLY 760.0148
ALA 770.0133
THR 780.0160
GLY 790.0189
LEU 800.0196
GLY 810.0223
LEU 820.0210
LYS 830.0212
GLU 840.0191
ALA 850.0161
LYS 860.0156
ASP 870.0145
LEU 880.0121
VAL 890.0105
GLU 900.0108
SER 910.0079
ALA 920.0058
PRO 930.0053
ALA 940.0075
VAL 950.0090
LEU 960.0103
LYS 970.0118
GLU 980.0126
GLY 990.0139
VAL 1000.0135
ASN 1010.0147
LYS 1020.0131
ASP 1030.0133
GLU 1040.0131
ALA 1050.0111
GLU 1060.0096
THR 1070.0099
LEU 1080.0097
LYS 1090.0073
LYS 1100.0067
SER 1110.0082
LEU 1120.0078
GLU 1130.0061
GLU 1140.0074
ALA 1150.0095
GLY 1160.0086
ALA 1170.0073
SER 1180.0057
VAL 1190.0057
GLU 1200.0067
ILE 1210.0091
LYS 1220.0085
GLU 1230.0094
ALA 1240.0099
ALA 1250.0087
ALA 1260.0054
LYS 1270.0064
ALA 1280.0047
TYR 1290.0065
LYS 1300.0076
ILE 1310.0115
ILE 1320.0152
SER 1330.0161
LEU 1340.0194
LYS 1350.0212
TYR 1360.0226
THR 1370.0236
ARG 1380.0247
LYS 1390.0263
VAL 1400.0263
CYS 1410.0326
ILE 1420.0316
GLY 1430.0375
PRO 1440.0359
GLY 1450.0429
PRO 1460.0342
GLY 1470.0175
LYS 1480.0185
ALA 1490.0213
TYR 1500.0182
LYS 1510.0228
ILE 1520.0193
ILE 1530.0178
SER 1540.0185
LEU 1550.0141
LYS 1560.0161
TYR 1570.0109
THR 1580.0148
ARG 1590.0136
LYS 1600.0183
VAL 1610.0195
CYS 1620.0269
GLY 1630.0319
PRO 1640.0370
GLY 1650.0412
PRO 1660.0484
GLY 1670.0474
GLY 1680.0433
LYS 1690.0357
ALA 1700.0293
TYR 1710.0231
LYS 1720.0162
ILE 1730.0135
ILE 1740.0072
SER 1750.0143
LEU 1760.0186
LYS 1770.0268
TYR 1780.0289
THR 1790.0356
ARG 1800.0384
LYS 1810.0425
VAL 1820.0422
GLY 1830.0423
PRO 1840.0350
GLY 1850.0308
PRO 1860.0272
GLY 1870.0194
ILE 1880.0238
ILE 1890.0160
SER 1900.0192
LEU 1910.0150
LYS 1920.0170
TYR 1930.0161
THR 1940.0177
ARG 1950.0172
LYS 1960.0159
VAL 1970.0155
CYS 1980.0127
ILE 1990.0135
GLN 2000.0120
LEU 2010.0076
GLY 2020.0076
GLY 2030.0064
PRO 2040.0043
GLY 2050.0039
PRO 2060.0009
GLY 2070.0011
ASN 2080.0013
ILE 2090.0012
LYS 2100.0010
THR 2110.0014
ALA 2120.0016
PHE 2130.0012
HIS 2140.0010
CYS 2150.0014
TYR 2160.0024
ALA 2170.0013
ALA 2180.0029
TYR 2190.0032
MET 2200.0020
THR 2210.0014
SER 2220.0013
ILE 2230.0015
LYS 2240.0016
ALA 2250.0020
CYS 2260.0051
ASP 2270.0060
LEU 2280.0166
LYS 2290.0234
LYS 2300.0352
PRO 2310.0355
LEU 2320.0328
MET 2330.0290
GLU 2340.0270
SER 2350.0236
GLY 2360.0141
TRP 2370.0166
SER 2380.0202
ASP 2390.0259
THR 2400.0306
ALA 2410.0399
HIS 2420.0313
GLY 2430.0349
LYS 2440.0249
LYS 2450.0243
SER 2460.0240
LEU 2470.0195
PRO 2480.0213
SER 2490.0303
SER 2500.0289
SER 2510.0222
SER 2520.0169
TYR 2530.0107
SER 2540.0074
TYR 2550.0091
ARG 2560.0108
ARG 2570.0100
LYS 2580.0108
LEU 2590.0091
THR 2600.0125
ASN 2610.0130
PRO 2620.0170
ALA 2630.0258
ASN 2640.0254
LYS 2650.0241
GLU 2660.0163
GLU 2670.0128
SER 2680.0098
ILE 2690.0106
LYS 2700.0123
LYS 2710.0114
GLN 2720.0077
LYS 2730.0053
TYR 2740.0046
SER 2750.0083
TYR 2760.0246
PRO 2770.0393
TRP 2780.0366
GLN 2790.0377
THR 2800.0530
SER 2810.0497
LYS 2820.0461
CYS 2830.0497
PHE 2840.0471
ASP 2880.0795
TYR 2890.0386
GLN 2900.0438
TYR 2910.0484
CYS 2970.0037
ASN 2980.0018
PRO 2990.0017
GLY 3000.0017
LYS 3010.0021
LYS 3020.0023
ASN 3030.0012
THR 3040.0007
ILE 3050.0010
SER 3060.0009
GLY 3070.0008
TYR 3080.0014
LYS 3090.0015
ARG 3100.0012
MET 3110.0013
MET 3120.0018
ALA 3130.0017
THR 3140.0016
LYS 3150.0018
ASP 3160.0019
SER 3170.0016
PHE 3180.0015
GLN 3190.0013
SER 3200.0014
PHE 3210.0013
ASN 3220.0010
LEU 3230.0011
THR 3240.0010
GLU 3250.0012
PRO 3260.0015
HIS 3270.0020
ILE 3280.0021
THR 3290.0023
THR 3300.0025
ASN 3310.0025
LYS 3320.0026
LEU 3330.0022
GLU 3340.0020
TRP 3350.0017
ILE 3360.0015
ASP 3370.0011
PRO 3380.0008
ASP 3390.0009
GLY 3400.0012
ASN 3410.0012
THR 3420.0026
ARG 3430.0043
GLY 3440.0059
GLY 3450.0074
GLY 3460.0093
GLY 10.0033
SER 20.0030
HIS 30.0027
SER 40.0024
MET 50.0021
ARG 60.0016
TYR 70.0013
PHE 80.0009
PHE 90.0006
THR 100.0004
SER 110.0006
VAL 120.0011
SER 130.0015
ARG 140.0019
PRO 150.0023
GLY 160.0027
ARG 170.0025
GLY 180.0021
GLU 190.0015
PRO 200.0012
ARG 210.0009
PHE 220.0006
ILE 230.0005
ALA 240.0006
VAL 250.0009
GLY 260.0014
TYR 270.0016
VAL 280.0020
ASP 290.0020
ASP 300.0017
THR 310.0018
GLN 320.0015
PHE 330.0017
VAL 340.0014
ARG 350.0011
PHE 360.0010
ASP 370.0009
SER 380.0009
ASP 390.0013
ALA 400.0015
ALA 410.0017
SER 420.0017
GLN 430.0012
ARG 440.0013
MET 450.0014
GLU 460.0015
PRO 470.0018
ARG 480.0018
ALA 490.0022
PRO 500.0027
TRP 510.0028
ILE 520.0025
GLU 530.0026
GLN 540.0030
GLU 550.0027
GLY 560.0028
PRO 570.0025
GLU 580.0024
TYR 590.0022
TRP 600.0019
ASP 610.0018
GLY 620.0018
GLU 630.0016
THR 640.0013
ARG 650.0012
LYS 660.0012
VAL 670.0009
LYS 680.0007
ALA 690.0008
HIS 700.0008
SER 710.0006
GLN 720.0006
THR 730.0008
HIS 740.0007
ARG 750.0007
VAL 760.0009
ASP 770.0010
LEU 780.0010
GLY 790.0012
THR 800.0015
LEU 810.0014
ARG 820.0017
GLY 830.0024
TYR 840.0027
TYR 850.0030
ASN 860.0033
GLN 870.0025
SER 880.0023
GLU 890.0027
ALA 900.0045
GLY 910.0025
SER 920.0020
HIS 930.0016
THR 940.0012
VAL 950.0007
GLN 960.0006
ARG 970.0009
MET 980.0011
TYR 990.0016
GLY 1000.0019
CYS 1010.0025
ASP 1020.0027
VAL 1030.0031
GLY 1040.0034
SER 1050.0036
ASP 1060.0039
TRP 1070.0035
ARG 1080.0035
PHE 1090.0033
LEU 1100.0033
ARG 1110.0029
GLY 1120.0025
TYR 1130.0021
HIS 1140.0018
GLN 1150.0015
TYR 1160.0011
ALA 1170.0009
TYR 1180.0010
ASP 1190.0011
GLY 1200.0008
LYS 1210.0009
ASP 1220.0010
TYR 1230.0013
ILE 1240.0016
ALA 1250.0017
LEU 1260.0022
LYS 1270.0024
GLU 1280.0026
ASP 1290.0031
LEU 1300.0029
ARG 1310.0032
SER 1320.0029
TRP 1330.0024
THR 1340.0020
ALA 1350.0020
ALA 1360.0015
ASP 1370.0019
MET 1380.0028
ALA 1390.0025
ALA 1400.0020
GLN 1410.0026
THR 1420.0028
THR 1430.0025
LYS 1440.0027
HIS 1450.0032
LYS 1460.0030
TRP 1470.0029
GLU 1480.0032
ALA 1490.0036
ALA 1500.0034
HIS 1510.0033
VAL 1520.0029
ALA 1530.0029
GLU 1540.0033
GLN 1550.0031
LEU 1560.0025
ARG 1570.0030
ALA 1580.0030
TYR 1590.0026
LEU 1600.0027
GLU 1610.0031
GLY 1620.0030
THR 1630.0026
CYS 1640.0025
VAL 1650.0030
GLU 1660.0030
TRP 1670.0027
LEU 1680.0027
ARG 1690.0031
ARG 1700.0030
TYR 1710.0028
LEU 1720.0030
GLU 1730.0034
ASN 1740.0032
GLY 1750.0030
LYS 1760.0033
GLU 1770.0032
THR 1780.0027
LEU 1790.0026
GLN 1800.0029
ARG 1810.0022
THR 1820.0022
ASP 1830.0021
ALA 1840.0022
PRO 1850.0021
LYS 1860.0022
THR 1870.0025
HIS 1880.0027
MET 1890.0029
THR 1900.0031
HIS 1910.0036
HIS 1920.0038
ALA 1930.0042
VAL 1940.0042
SER 1950.0048
ASP 1960.0054
HIS 1970.0051
GLU 1980.0044
ALA 1990.0041
THR 2000.0035
LEU 2010.0033
ARG 2020.0029
CYS 2030.0026
TRP 2040.0023
ALA 2050.0020
LEU 2060.0020
SER 2070.0019
PHE 2080.0018
TYR 2090.0017
PRO 2100.0017
ALA 2110.0015
GLU 2120.0016
ILE 2130.0018
THR 2140.0019
LEU 2150.0021
THR 2160.0024
TRP 2170.0028
GLN 2180.0032
ARG 2190.0036
ASP 2200.0040
GLY 2210.0036
GLU 2220.0033
ASP 2230.0028
GLN 2240.0026
THR 2250.0021
GLN 2260.0020
ASP 2270.0023
THR 2280.0022
GLU 2290.0020
LEU 2300.0017
VAL 2310.0014
GLU 2320.0011
THR 2330.0011
ARG 2340.0011
PRO 2350.0010
ALA 2360.0015
GLY 2370.0012
ASP 2380.0012
GLY 2390.0009
THR 2400.0014
PHE 2410.0014
GLN 2420.0016
LYS 2430.0017
TRP 2440.0020
ALA 2450.0022
ALA 2460.0026
VAL 2470.0030
VAL 2480.0034
VAL 2490.0038
PRO 2500.0044
SER 2510.0048
GLY 2520.0050
GLN 2530.0046
GLU 2540.0043
GLN 2550.0046
ARG 2560.0042
TYR 2570.0038
THR 2580.0035
CYS 2590.0030
HIS 2600.0028
VAL 2610.0024
GLN 2620.0023
HIS 2630.0022
GLU 2640.0023
GLY 2650.0024
LEU 2660.0027
PRO 2670.0031
LYS 2680.0032
PRO 2690.0030
LEU 2700.0030
THR 2710.0034
LEU 2720.0034
ARG 2730.0038
TRP 2740.0039
GLU 2750.0044
PRO 2760.0046
GLN 2780.0006
ARG 2790.0005
THR 2800.0007
PRO 2810.0007
LYS 2820.0009
ILE 2830.0012
GLN 2840.0015
VAL 2850.0016
TYR 2860.0019
SER 2870.0021
ARG 2880.0021
HIS 2890.0026
PRO 2900.0031
ALA 2910.0033
GLU 2920.0039
ASN 2930.0042
GLY 2940.0043
LYS 2950.0039
SER 2960.0034
ASN 2970.0028
PHE 2980.0022
LEU 2990.0020
ASN 3000.0016
CYS 3010.0012
TYR 3020.0010
VAL 3030.0003
SER 3040.0003
GLY 3050.0004
PHE 3060.0004
HIS 3070.0006
PRO 3080.0011
SER 3090.0010
ASP 3100.0008
ILE 3110.0005
GLU 3120.0006
VAL 3130.0006
ASP 3140.0010
LEU 3150.0016
LEU 3160.0019
LYS 3170.0024
ASN 3180.0026
GLY 3190.0021
GLU 3200.0019
ARG 3210.0016
ILE 3220.0019
GLU 3230.0019
LYS 3240.0019
VAL 3250.0015
GLU 3260.0013
HIS 3270.0009
SER 3280.0007
ASP 3290.0006
LEU 3300.0004
SER 3310.0003
PHE 3320.0004
SER 3330.0004
LYS 3340.0005
ASP 3350.0003
TRP 3360.0003
SER 3370.0001
PHE 3380.0003
TYR 3390.0003
LEU 3400.0004
LEU 3410.0007
TYR 3420.0008
TYR 3430.0014
THR 3440.0019
GLU 3450.0025
PHE 3460.0028
THR 3470.0034
PRO 3480.0035
THR 3490.0041
GLU 3500.0044
LYS 3510.0042
ASP 3520.0036
GLU 3530.0031
TYR 3540.0027
ALA 3550.0022
CYS 3560.0018
ARG 3570.0014
VAL 3580.0019
ASN 3590.0017
HIS 3600.0015
VAL 3610.0020
THR 3620.0022
LEU 3630.0033
SER 3640.0046
GLN 3650.0044
PRO 3660.0038
LYS 3670.0041
ILE 3680.0018
VAL 3690.0022
LYS 3700.0026
TRP 3710.0028
ASP 3720.0034
ARG 3730.0031
ASP 3740.0033
MET 3750.0031
SER 10.0006
GLN 20.0007
PHE 30.0007
ARG 40.0007
VAL 50.0008
SER 60.0008
PRO 70.0008
LEU 80.0007
ASP 90.0006
ARG 100.0007
THR 110.0008
TRP 120.0009
ASN 130.0009
LEU 140.0009
GLY 150.0010
GLU 160.0011
THR 170.0010
VAL 180.0010
GLU 190.0010
LEU 200.0009
LYS 210.0009
CYS 220.0009
GLN 230.0008
VAL 240.0009
LEU 250.0008
LEU 260.0009
SER 270.0007
ASN 280.0010
PRO 290.0013
THR 300.0016
SER 310.0015
GLY 320.0014
CYS 330.0013
SER 340.0012
TRP 350.0011
LEU 360.0009
PHE 370.0008
GLN 380.0008
PRO 390.0007
ARG 400.0008
GLY 410.0015
ALA 420.0022
ALA 430.0022
ALA 440.0015
SER 450.0014
PRO 460.0010
THR 470.0011
PHE 480.0011
LEU 490.0012
LEU 500.0013
TYR 510.0015
LEU 520.0016
SER 530.0017
GLN 540.0019
ASN 550.0021
LYS 560.0019
PRO 570.0017
LYS 580.0017
ALA 590.0017
ALA 600.0017
GLU 610.0021
GLY 620.0021
LEU 630.0018
ASP 640.0016
THR 650.0012
GLN 660.0013
ARG 670.0012
PHE 680.0012
SER 690.0012
GLY 700.0011
LYS 710.0012
ARG 720.0011
LEU 730.0010
GLY 740.0010
ASP 750.0010
THR 760.0009
PHE 770.0010
VAL 780.0010
LEU 790.0011
THR 800.0011
LEU 810.0011
SER 820.0011
ASP 830.0011
PHE 840.0010
ARG 850.0010
ARG 860.0010
GLU 870.0010
ASN 880.0009
GLU 890.0009
GLY 900.0008
TYR 910.0008
TYR 920.0008
PHE 930.0009
CYS 940.0010
SER 950.0010
ALA 960.0013
LEU 970.0015
SER 980.0015
ASN 990.0017
SER 1000.0017
ILE 1010.0013
MET 1020.0012
TYR 1030.0012
PHE 1040.0010
SER 1050.0010
HIS 1060.0009
PHE 1070.0008
VAL 1080.0008
PRO 1090.0008
VAL 1100.0008
PHE 1110.0009
LEU 1120.0009
PRO 1130.0010
ALA 1140.0011
SER 10.0029
GLN 20.0027
PHE 30.0025
ARG 40.0028
VAL 50.0025
SER 60.0030
PRO 70.0035
LEU 80.0039
ASP 90.0047
ARG 100.0046
THR 110.0048
TRP 120.0047
ASN 130.0054
LEU 140.0055
GLY 150.0052
GLU 160.0046
THR 170.0037
VAL 180.0032
GLU 190.0026
LEU 200.0022
LYS 210.0019
CYS 220.0019
GLN 230.0022
VAL 240.0022
LEU 250.0029
LEU 260.0029
SER 270.0035
ASN 280.0033
PRO 290.0027
THR 300.0025
SER 310.0022
GLY 320.0017
CYS 330.0013
SER 340.0010
TRP 350.0011
LEU 360.0012
PHE 370.0017
GLN 380.0018
PRO 390.0025
ARG 400.0028
GLY 410.0016
ALA 420.0008
ALA 430.0010
ALA 440.0013
SER 450.0011
PRO 460.0012
THR 470.0014
PHE 480.0013
LEU 490.0014
LEU 500.0012
TYR 510.0012
LEU 520.0013
SER 530.0019
GLN 540.0024
ASN 550.0025
LYS 560.0021
PRO 570.0017
LYS 580.0018
ALA 590.0017
ALA 600.0017
GLU 610.0025
GLY 620.0029
LEU 630.0026
ASP 640.0030
THR 650.0028
GLN 660.0032
ARG 670.0031
PHE 680.0024
SER 690.0017
GLY 700.0011
LYS 710.0010
ARG 720.0012
LEU 730.0015
GLY 740.0020
ASP 750.0022
THR 760.0018
PHE 770.0013
VAL 780.0013
LEU 790.0015
THR 800.0020
LEU 810.0028
SER 820.0034
ASP 830.0043
PHE 840.0043
ARG 850.0048
ARG 860.0051
GLU 870.0045
ASN 880.0037
GLU 890.0038
GLY 900.0031
TYR 910.0023
TYR 920.0019
PHE 930.0015
CYS 940.0012
SER 950.0012
ALA 960.0016
LEU 970.0018
SER 980.0022
ASN 990.0024
SER 1000.0020
ILE 1010.0019
MET 1020.0015
TYR 1030.0016
PHE 1040.0015
SER 1050.0017
HIS 1060.0023
PHE 1070.0023
VAL 1080.0027
PRO 1090.0032
VAL 1100.0034
PHE 1110.0043
LEU 1120.0053
PRO 1130.0060
ALA 1140.0065

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.