CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1218
MET 10.0295
SER 20.0173
THR 30.0175
ILE 40.0084
THR 50.0128
LYS 60.0114
ASP 70.0138
GLN 80.0093
ILE 90.0025
LEU 100.0077
GLU 110.0114
GLY 120.0133
VAL 130.0055
ALA 140.0069
ALA 150.0156
LEU 160.0255
SER 170.0420
VAL 180.0450
MET 190.0479
GLU 200.0337
ILE 210.0183
VAL 220.0266
GLU 230.0231
LEU 240.0122
ILE 250.0131
SER 260.0079
ALA 270.0244
MET 280.0309
GLU 290.0224
GLU 300.0250
LYS 310.0456
PHE 320.0501
GLY 330.0348
VAL 340.0453
SER 350.0419
ALA 360.0885
ALA 370.0776
ALA 380.0314
VAL 390.0611
ALA 400.0828
ALA 410.0477
GLY 420.0357
PRO 430.0935
ALA 440.1218
ALA 450.0826
ALA 460.0633
VAL 470.0875
GLU 480.0728
ALA 490.0231
ALA 500.0101
GLU 510.0169
GLU 520.0127
GLN 530.0107
THR 540.0079
GLU 550.0080
PHE 560.0070
ASP 570.0056
VAL 580.0060
VAL 590.0064
LEU 600.0069
ALA 610.0087
SER 620.0099
PHE 630.0098
GLY 640.0122
GLU 650.0134
ASN 660.0112
LYS 670.0093
VAL 680.0079
ALA 690.0081
VAL 700.0074
ILE 710.0055
LYS 720.0052
ALA 730.0063
VAL 740.0045
ARG 750.0031
GLY 760.0050
ALA 770.0055
THR 780.0038
GLY 790.0040
LEU 800.0027
GLY 810.0030
LEU 820.0034
LYS 830.0053
GLU 840.0042
ALA 850.0034
LYS 860.0059
ASP 870.0062
LEU 880.0048
VAL 890.0063
GLU 900.0079
SER 910.0066
ALA 920.0067
PRO 930.0062
ALA 940.0049
VAL 950.0038
LEU 960.0038
LYS 970.0039
GLU 980.0038
GLY 990.0052
VAL 1000.0069
ASN 1010.0095
LYS 1020.0110
ASP 1030.0121
GLU 1040.0097
ALA 1050.0087
GLU 1060.0113
THR 1070.0105
LEU 1080.0080
LYS 1090.0096
LYS 1100.0110
SER 1110.0093
LEU 1120.0085
GLU 1130.0112
GLU 1140.0114
ALA 1150.0095
GLY 1160.0113
ALA 1170.0101
SER 1180.0110
VAL 1190.0096
GLU 1200.0097
ILE 1210.0094
LYS 1220.0087
GLU 1230.0085
ALA 1240.0067
ALA 1250.0064
ALA 1260.0049
LYS 1270.0047
ALA 1280.0042
TYR 1290.0044
LYS 1300.0041
ILE 1310.0054
ILE 1320.0059
SER 1330.0060
LEU 1340.0066
LYS 1350.0068
TYR 1360.0084
THR 1370.0081
ARG 1380.0076
LYS 1390.0075
VAL 1400.0067
CYS 1410.0067
ILE 1420.0047
GLY 1430.0052
PRO 1440.0050
GLY 1450.0056
PRO 1460.0089
GLY 1470.0103
LYS 1480.0089
ALA 1490.0087
TYR 1500.0067
LYS 1510.0061
ILE 1520.0066
ILE 1530.0055
SER 1540.0065
LEU 1550.0059
LYS 1560.0064
TYR 1570.0062
THR 1580.0061
ARG 1590.0061
LYS 1600.0058
VAL 1610.0058
CYS 1620.0051
GLY 1630.0051
PRO 1640.0057
GLY 1650.0059
PRO 1660.0077
GLY 1670.0086
GLY 1680.0076
LYS 1690.0079
ALA 1700.0069
TYR 1710.0059
LYS 1720.0060
ILE 1730.0054
ILE 1740.0059
SER 1750.0055
LEU 1760.0051
LYS 1770.0057
TYR 1780.0053
THR 1790.0064
ARG 1800.0064
LYS 1810.0082
VAL 1820.0086
GLY 1830.0101
PRO 1840.0106
GLY 1850.0102
PRO 1860.0083
GLY 1870.0071
ILE 1880.0075
ILE 1890.0063
SER 1900.0076
LEU 1910.0069
LYS 1920.0070
TYR 1930.0069
THR 1940.0068
ARG 1950.0069
LYS 1960.0056
VAL 1970.0057
CYS 1980.0053
ILE 1990.0055
GLN 2000.0052
LEU 2010.0029
GLY 2020.0033
GLY 2030.0031
PRO 2040.0026
GLY 2050.0029
PRO 2060.0025
GLY 2070.0028
ASN 2080.0027
ILE 2090.0023
LYS 2100.0026
THR 2110.0030
ALA 2120.0027
PHE 2130.0026
HIS 2140.0029
CYS 2150.0030
TYR 2160.0027
ALA 2170.0031
ALA 2180.0033
TYR 2190.0024
MET 2200.0019
THR 2210.0025
SER 2220.0009
ILE 2230.0008
LYS 2240.0013
ALA 2250.0018
CYS 2260.0019
ASP 2270.0011
LEU 2280.0017
LYS 2290.0031
LYS 2300.0053
PRO 2310.0055
LEU 2320.0047
MET 2330.0041
GLU 2340.0035
SER 2350.0027
GLY 2360.0018
TRP 2370.0034
SER 2380.0044
ASP 2390.0061
THR 2400.0072
ALA 2410.0094
HIS 2420.0085
GLY 2430.0088
LYS 2440.0051
LYS 2450.0049
SER 2460.0062
LEU 2470.0042
PRO 2480.0046
SER 2490.0076
SER 2500.0071
SER 2510.0045
SER 2520.0032
TYR 2530.0019
SER 2540.0018
TYR 2550.0028
ARG 2560.0023
ARG 2570.0022
LYS 2580.0029
LEU 2590.0028
THR 2600.0037
ASN 2610.0034
PRO 2620.0050
ALA 2630.0037
ASN 2640.0041
LYS 2650.0027
GLU 2660.0029
GLU 2670.0018
SER 2680.0025
ILE 2690.0014
LYS 2700.0026
LYS 2710.0025
GLN 2720.0025
LYS 2730.0024
TYR 2740.0023
SER 2750.0023
TYR 2760.0039
PRO 2770.0040
TRP 2780.0049
GLN 2790.0036
THR 2800.0030
SER 2810.0043
LYS 2820.0007
CYS 2830.0014
PHE 2840.0023
ASP 2880.0054
TYR 2890.0029
GLN 2900.0018
TYR 2910.0062
CYS 2970.0339
ASN 2980.0247
PRO 2990.0210
GLY 3000.0184
LYS 3010.0205
LYS 3020.0206
ASN 3030.0175
THR 3040.0162
ILE 3050.0164
SER 3060.0175
GLY 3070.0168
TYR 3080.0172
LYS 3090.0161
ARG 3100.0154
MET 3110.0160
MET 3120.0157
ALA 3130.0159
THR 3140.0148
LYS 3150.0151
ASP 3160.0153
SER 3170.0140
PHE 3180.0107
GLN 3190.0094
SER 3200.0065
PHE 3210.0062
ASN 3220.0043
LEU 3230.0046
THR 3240.0062
GLU 3250.0067
PRO 3260.0052
HIS 3270.0053
ILE 3280.0040
THR 3290.0039
THR 3300.0036
ASN 3310.0028
LYS 3320.0029
LEU 3330.0030
GLU 3340.0048
TRP 3350.0054
ILE 3360.0071
ASP 3370.0064
PRO 3380.0090
ASP 3390.0101
GLY 3400.0104
ASN 3410.0106
THR 3420.0110
ARG 3430.0120
GLY 3440.0227
GLY 3450.0355
GLY 3460.0452
GLY 10.0027
SER 20.0023
HIS 30.0020
SER 40.0016
MET 50.0015
ARG 60.0012
TYR 70.0011
PHE 80.0011
PHE 90.0013
THR 100.0015
SER 110.0016
VAL 120.0015
SER 130.0017
ARG 140.0019
PRO 150.0022
GLY 160.0028
ARG 170.0024
GLY 180.0022
GLU 190.0023
PRO 200.0020
ARG 210.0020
PHE 220.0018
ILE 230.0016
ALA 240.0015
VAL 250.0014
GLY 260.0016
TYR 270.0016
VAL 280.0017
ASP 290.0017
ASP 300.0017
THR 310.0020
GLN 320.0019
PHE 330.0022
VAL 340.0022
ARG 350.0021
PHE 360.0021
ASP 370.0021
SER 380.0024
ASP 390.0025
ALA 400.0026
ALA 410.0035
SER 420.0034
GLN 430.0031
ARG 440.0029
MET 450.0026
GLU 460.0028
PRO 470.0028
ARG 480.0027
ALA 490.0028
PRO 500.0033
TRP 510.0033
ILE 520.0030
GLU 530.0034
GLN 540.0037
GLU 550.0033
GLY 560.0035
PRO 570.0035
GLU 580.0031
TYR 590.0028
TRP 600.0029
ASP 610.0030
GLY 620.0025
GLU 630.0023
THR 640.0026
ARG 650.0025
LYS 660.0020
VAL 670.0020
LYS 680.0023
ALA 690.0020
HIS 700.0017
SER 710.0018
GLN 720.0020
THR 730.0018
HIS 740.0017
ARG 750.0021
VAL 760.0020
ASP 770.0018
LEU 780.0019
GLY 790.0022
THR 800.0021
LEU 810.0019
ARG 820.0020
GLY 830.0023
TYR 840.0022
TYR 850.0022
ASN 860.0025
GLN 870.0023
SER 880.0024
GLU 890.0024
ALA 900.0027
GLY 910.0024
SER 920.0021
HIS 930.0018
THR 940.0018
VAL 950.0017
GLN 960.0014
ARG 970.0012
MET 980.0011
TYR 990.0011
GLY 1000.0013
CYS 1010.0014
ASP 1020.0017
VAL 1030.0022
GLY 1040.0026
SER 1050.0030
ASP 1060.0032
TRP 1070.0028
ARG 1080.0026
PHE 1090.0022
LEU 1100.0022
ARG 1110.0018
GLY 1120.0014
TYR 1130.0013
HIS 1140.0012
GLN 1150.0014
TYR 1160.0016
ALA 1170.0017
TYR 1180.0018
ASP 1190.0020
GLY 1200.0021
LYS 1210.0020
ASP 1220.0019
TYR 1230.0018
ILE 1240.0017
ALA 1250.0016
LEU 1260.0014
LYS 1270.0017
GLU 1280.0016
ASP 1290.0017
LEU 1300.0014
ARG 1310.0015
SER 1320.0017
TRP 1330.0017
THR 1340.0019
ALA 1350.0021
ALA 1360.0022
ASP 1370.0020
MET 1380.0017
ALA 1390.0016
ALA 1400.0017
GLN 1410.0018
THR 1420.0017
THR 1430.0015
LYS 1440.0015
HIS 1450.0015
LYS 1460.0014
TRP 1470.0013
GLU 1480.0013
ALA 1490.0012
ALA 1500.0011
HIS 1510.0011
VAL 1520.0010
ALA 1530.0011
GLU 1540.0011
GLN 1550.0010
LEU 1560.0010
ARG 1570.0012
ALA 1580.0012
TYR 1590.0012
LEU 1600.0013
GLU 1610.0016
GLY 1620.0017
THR 1630.0016
CYS 1640.0016
VAL 1650.0019
GLU 1660.0022
TRP 1670.0021
LEU 1680.0021
ARG 1690.0026
ARG 1700.0027
TYR 1710.0026
LEU 1720.0027
GLU 1730.0032
ASN 1740.0032
GLY 1750.0031
LYS 1760.0032
GLU 1770.0035
THR 1780.0030
LEU 1790.0027
GLN 1800.0029
ARG 1810.0027
THR 1820.0027
ASP 1830.0029
ALA 1840.0030
PRO 1850.0030
LYS 1860.0032
THR 1870.0034
HIS 1880.0037
MET 1890.0038
THR 1900.0041
HIS 1910.0046
HIS 1920.0051
ALA 1930.0058
VAL 1940.0059
SER 1950.0068
ASP 1960.0074
HIS 1970.0068
GLU 1980.0059
ALA 1990.0054
THR 2000.0046
LEU 2010.0040
ARG 2020.0037
CYS 2030.0033
TRP 2040.0031
ALA 2050.0026
LEU 2060.0030
SER 2070.0031
PHE 2080.0027
TYR 2090.0024
PRO 2100.0020
ALA 2110.0018
GLU 2120.0017
ILE 2130.0018
THR 2140.0018
LEU 2150.0021
THR 2160.0022
TRP 2170.0027
GLN 2180.0028
ARG 2190.0033
ASP 2200.0036
GLY 2210.0032
GLU 2220.0025
ASP 2230.0020
GLN 2240.0021
THR 2250.0015
GLN 2260.0019
ASP 2270.0025
THR 2280.0024
GLU 2290.0027
LEU 2300.0023
VAL 2310.0018
GLU 2320.0018
THR 2330.0018
ARG 2340.0021
PRO 2350.0023
ALA 2360.0030
GLY 2370.0031
ASP 2380.0033
GLY 2390.0028
THR 2400.0028
PHE 2410.0023
GLN 2420.0025
LYS 2430.0024
TRP 2440.0026
ALA 2450.0025
ALA 2460.0034
VAL 2470.0036
VAL 2480.0043
VAL 2490.0045
PRO 2500.0052
SER 2510.0059
GLY 2520.0059
GLN 2530.0051
GLU 2540.0050
GLN 2550.0051
ARG 2560.0044
TYR 2570.0039
THR 2580.0036
CYS 2590.0032
HIS 2600.0027
VAL 2610.0026
GLN 2620.0023
HIS 2630.0023
GLU 2640.0023
GLY 2650.0026
LEU 2660.0030
PRO 2670.0033
LYS 2680.0033
PRO 2690.0030
LEU 2700.0033
THR 2710.0035
LEU 2720.0038
ARG 2730.0043
TRP 2740.0046
GLU 2750.0051
PRO 2760.0053
GLN 2780.0032
ARG 2790.0025
THR 2800.0023
PRO 2810.0017
LYS 2820.0014
ILE 2830.0013
GLN 2840.0014
VAL 2850.0021
TYR 2860.0026
SER 2870.0034
ARG 2880.0037
HIS 2890.0042
PRO 2900.0044
ALA 2910.0045
GLU 2920.0053
ASN 2930.0054
GLY 2940.0061
LYS 2950.0061
SER 2960.0058
ASN 2970.0050
PHE 2980.0043
LEU 2990.0036
ASN 3000.0030
CYS 3010.0024
TYR 3020.0018
VAL 3030.0012
SER 3040.0010
GLY 3050.0013
PHE 3060.0017
HIS 3070.0021
PRO 3080.0023
SER 3090.0019
ASP 3100.0027
ILE 3110.0027
GLU 3120.0032
VAL 3130.0032
ASP 3140.0036
LEU 3150.0034
LEU 3160.0037
LYS 3170.0042
ASN 3180.0040
GLY 3190.0039
GLU 3200.0049
ARG 3210.0050
ILE 3220.0052
GLU 3230.0061
LYS 3240.0060
VAL 3250.0048
GLU 3260.0044
HIS 3270.0033
SER 3280.0023
ASP 3290.0021
LEU 3300.0018
SER 3310.0013
PHE 3320.0011
SER 3330.0015
LYS 3340.0017
ASP 3350.0018
TRP 3360.0017
SER 3370.0017
PHE 3380.0014
TYR 3390.0013
LEU 3400.0019
LEU 3410.0023
TYR 3420.0029
TYR 3430.0037
THR 3440.0045
GLU 3450.0051
PHE 3460.0051
THR 3470.0054
PRO 3480.0048
THR 3490.0050
GLU 3500.0045
LYS 3510.0042
ASP 3520.0042
GLU 3530.0032
TYR 3540.0031
ALA 3550.0024
CYS 3560.0024
ARG 3570.0029
VAL 3580.0027
ASN 3590.0034
HIS 3600.0032
VAL 3610.0038
THR 3620.0036
LEU 3630.0043
SER 3640.0055
GLN 3650.0054
PRO 3660.0045
LYS 3670.0038
ILE 3680.0024
VAL 3690.0015
LYS 3700.0017
TRP 3710.0022
ASP 3720.0023
ARG 3730.0034
ASP 3740.0033
MET 3750.0031
SER 10.0029
GLN 20.0026
PHE 30.0026
ARG 40.0028
VAL 50.0029
SER 60.0035
PRO 70.0037
LEU 80.0037
ASP 90.0042
ARG 100.0039
THR 110.0038
TRP 120.0040
ASN 130.0042
LEU 140.0042
GLY 150.0046
GLU 160.0040
THR 170.0037
VAL 180.0033
GLU 190.0034
LEU 200.0032
LYS 210.0026
CYS 220.0025
GLN 230.0025
VAL 240.0024
LEU 250.0025
LEU 260.0020
SER 270.0018
ASN 280.0015
PRO 290.0011
THR 300.0010
SER 310.0011
GLY 320.0010
CYS 330.0013
SER 340.0015
TRP 350.0020
LEU 360.0022
PHE 370.0024
GLN 380.0025
PRO 390.0027
ARG 400.0028
GLY 410.0041
ALA 420.0044
ALA 430.0044
ALA 440.0038
SER 450.0034
PRO 460.0025
THR 470.0023
PHE 480.0019
LEU 490.0021
LEU 500.0018
TYR 510.0014
LEU 520.0013
SER 530.0009
GLN 540.0010
ASN 550.0015
LYS 560.0017
PRO 570.0016
LYS 580.0017
ALA 590.0021
ALA 600.0020
GLU 610.0026
GLY 620.0027
LEU 630.0024
ASP 640.0025
THR 650.0022
GLN 660.0024
ARG 670.0025
PHE 680.0022
SER 690.0021
GLY 700.0021
LYS 710.0019
ARG 720.0018
LEU 730.0021
GLY 740.0022
ASP 750.0022
THR 760.0025
PHE 770.0023
VAL 780.0024
LEU 790.0023
THR 800.0025
LEU 810.0027
SER 820.0032
ASP 830.0035
PHE 840.0033
ARG 850.0032
ARG 860.0030
GLU 870.0024
ASN 880.0024
GLU 890.0024
GLY 900.0025
TYR 910.0028
TYR 920.0026
PHE 930.0024
CYS 940.0021
SER 950.0019
ALA 960.0013
LEU 970.0014
SER 980.0019
ASN 990.0025
SER 1000.0024
ILE 1010.0023
MET 1020.0019
TYR 1030.0021
PHE 1040.0025
SER 1050.0028
HIS 1060.0030
PHE 1070.0029
VAL 1080.0030
PRO 1090.0031
VAL 1100.0031
PHE 1110.0028
LEU 1120.0031
PRO 1130.0034
ALA 1140.0027
SER 10.0027
GLN 20.0018
PHE 30.0016
ARG 40.0020
VAL 50.0027
SER 60.0037
PRO 70.0046
LEU 80.0051
ASP 90.0061
ARG 100.0067
THR 110.0076
TRP 120.0080
ASN 130.0092
LEU 140.0098
GLY 150.0097
GLU 160.0087
THR 170.0076
VAL 180.0065
GLU 190.0054
LEU 200.0043
LYS 210.0032
CYS 220.0023
GLN 230.0014
VAL 240.0009
LEU 250.0012
LEU 260.0015
SER 270.0025
ASN 280.0026
PRO 290.0019
THR 300.0026
SER 310.0021
GLY 320.0023
CYS 330.0020
SER 340.0024
TRP 350.0030
LEU 360.0031
PHE 370.0039
GLN 380.0043
PRO 390.0053
ARG 400.0060
GLY 410.0046
ALA 420.0043
ALA 430.0037
ALA 440.0036
SER 450.0031
PRO 460.0035
THR 470.0036
PHE 480.0032
LEU 490.0038
LEU 500.0035
TYR 510.0031
LEU 520.0032
SER 530.0032
GLN 540.0040
ASN 550.0045
LYS 560.0048
PRO 570.0043
LYS 580.0041
ALA 590.0044
ALA 600.0042
GLU 610.0046
GLY 620.0061
LEU 630.0063
ASP 640.0077
THR 650.0075
GLN 660.0086
ARG 670.0080
PHE 680.0067
SER 690.0061
GLY 700.0050
LYS 710.0045
ARG 720.0037
LEU 730.0035
GLY 740.0030
ASP 750.0020
THR 760.0021
PHE 770.0029
VAL 780.0038
LEU 790.0046
THR 800.0057
LEU 810.0069
SER 820.0079
ASP 830.0089
PHE 840.0084
ARG 850.0091
ARG 860.0092
GLU 870.0085
ASN 880.0073
GLU 890.0073
GLY 900.0062
TYR 910.0048
TYR 920.0041
PHE 930.0031
CYS 940.0022
SER 950.0015
ALA 960.0011
LEU 970.0010
SER 980.0014
ASN 990.0017
SER 1000.0012
ILE 1010.0013
MET 1020.0011
TYR 1030.0014
PHE 1040.0019
SER 1050.0021
HIS 1060.0033
PHE 1070.0040
VAL 1080.0044
PRO 1090.0056
VAL 1100.0061
PHE 1110.0075
LEU 1120.0088
PRO 1130.0095
ALA 1140.0103

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.