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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0739
MET 10.0041
SER 20.0025
THR 30.0023
ILE 40.0010
THR 50.0010
LYS 60.0006
ASP 70.0014
GLN 80.0015
ILE 90.0013
LEU 100.0017
GLU 110.0022
GLY 120.0026
VAL 130.0022
ALA 140.0027
ALA 150.0036
LEU 160.0050
SER 170.0076
VAL 180.0081
MET 190.0087
GLU 200.0065
ILE 210.0039
VAL 220.0056
GLU 230.0052
LEU 240.0029
ILE 250.0026
SER 260.0030
ALA 270.0047
MET 280.0046
GLU 290.0026
GLU 300.0035
LYS 310.0066
PHE 320.0066
GLY 330.0032
VAL 340.0067
SER 350.0078
ALA 360.0167
ALA 370.0154
ALA 380.0063
VAL 390.0098
ALA 400.0138
ALA 410.0078
GLY 420.0107
PRO 430.0199
ALA 440.0242
ALA 450.0160
ALA 460.0090
VAL 470.0138
GLU 480.0175
ALA 490.0136
ALA 500.0116
GLU 510.0128
GLU 520.0133
GLN 530.0120
THR 540.0142
GLU 550.0128
PHE 560.0102
ASP 570.0068
VAL 580.0053
VAL 590.0031
LEU 600.0039
ALA 610.0068
SER 620.0094
PHE 630.0105
GLY 640.0143
GLU 650.0176
ASN 660.0154
LYS 670.0135
VAL 680.0131
ALA 690.0107
VAL 700.0083
ILE 710.0085
LYS 720.0073
ALA 730.0042
VAL 740.0029
ARG 750.0054
GLY 760.0022
ALA 770.0035
THR 780.0064
GLY 790.0086
LEU 800.0106
GLY 810.0142
LEU 820.0141
LYS 830.0166
GLU 840.0136
ALA 850.0095
LYS 860.0124
ASP 870.0121
LEU 880.0079
VAL 890.0079
GLU 900.0107
SER 910.0074
ALA 920.0054
PRO 930.0033
ALA 940.0026
VAL 950.0023
LEU 960.0025
LYS 970.0059
GLU 980.0080
GLY 990.0114
VAL 1000.0119
ASN 1010.0152
LYS 1020.0156
ASP 1030.0172
GLU 1040.0139
ALA 1050.0113
GLU 1060.0138
THR 1070.0125
LEU 1080.0083
LYS 1090.0099
LYS 1100.0122
SER 1110.0084
LEU 1120.0074
GLU 1130.0119
GLU 1140.0125
ALA 1150.0105
GLY 1160.0128
ALA 1170.0101
SER 1180.0105
VAL 1190.0080
GLU 1200.0084
ILE 1210.0084
LYS 1220.0070
GLU 1230.0086
ALA 1240.0079
ALA 1250.0067
ALA 1260.0060
LYS 1270.0063
ALA 1280.0069
TYR 1290.0066
LYS 1300.0073
ILE 1310.0081
ILE 1320.0097
SER 1330.0111
LEU 1340.0131
LYS 1350.0145
TYR 1360.0180
THR 1370.0144
ARG 1380.0088
LYS 1390.0071
VAL 1400.0030
CYS 1410.0161
ILE 1420.0223
GLY 1430.0356
PRO 1440.0430
GLY 1450.0573
PRO 1460.0671
GLY 1470.0561
LYS 1480.0373
ALA 1490.0189
TYR 1500.0082
LYS 1510.0068
ILE 1520.0092
ILE 1530.0128
SER 1540.0170
LEU 1550.0199
LYS 1560.0214
TYR 1570.0188
THR 1580.0142
ARG 1590.0133
LYS 1600.0107
VAL 1610.0150
CYS 1620.0208
GLY 1630.0316
PRO 1640.0461
GLY 1650.0521
PRO 1660.0694
GLY 1670.0739
GLY 1680.0670
LYS 1690.0567
ALA 1700.0436
TYR 1710.0315
LYS 1720.0246
ILE 1730.0150
ILE 1740.0163
SER 1750.0159
LEU 1760.0251
LYS 1770.0266
TYR 1780.0253
THR 1790.0255
ARG 1800.0244
LYS 1810.0233
VAL 1820.0155
GLY 1830.0180
PRO 1840.0215
GLY 1850.0298
PRO 1860.0281
GLY 1870.0164
ILE 1880.0142
ILE 1890.0048
SER 1900.0137
LEU 1910.0147
LYS 1920.0148
TYR 1930.0148
THR 1940.0152
ARG 1950.0153
LYS 1960.0110
VAL 1970.0108
CYS 1980.0084
ILE 1990.0091
GLN 2000.0076
LEU 2010.0073
GLY 2020.0069
GLY 2030.0062
PRO 2040.0054
GLY 2050.0052
PRO 2060.0049
GLY 2070.0056
ASN 2080.0062
ILE 2090.0051
LYS 2100.0051
THR 2110.0067
ALA 2120.0060
PHE 2130.0049
HIS 2140.0060
CYS 2150.0066
TYR 2160.0047
ALA 2170.0049
ALA 2180.0073
TYR 2190.0062
MET 2200.0039
THR 2210.0064
SER 2220.0057
ILE 2230.0048
LYS 2240.0039
ALA 2250.0032
CYS 2260.0084
ASP 2270.0088
LEU 2280.0164
LYS 2290.0204
LYS 2300.0281
PRO 2310.0369
LEU 2320.0332
MET 2330.0237
GLU 2340.0209
SER 2350.0205
GLY 2360.0099
TRP 2370.0091
SER 2380.0130
ASP 2390.0112
THR 2400.0155
ALA 2410.0291
HIS 2420.0207
GLY 2430.0296
LYS 2440.0174
LYS 2450.0234
SER 2460.0341
LEU 2470.0237
PRO 2480.0192
SER 2490.0189
SER 2500.0142
SER 2510.0125
SER 2520.0113
TYR 2530.0090
SER 2540.0085
TYR 2550.0073
ARG 2560.0066
ARG 2570.0046
LYS 2580.0046
LEU 2590.0087
THR 2600.0118
ASN 2610.0185
PRO 2620.0255
ALA 2630.0294
ASN 2640.0233
LYS 2650.0185
GLU 2660.0071
GLU 2670.0096
SER 2680.0101
ILE 2690.0171
LYS 2700.0229
LYS 2710.0186
GLN 2720.0147
LYS 2730.0087
TYR 2740.0035
SER 2750.0031
TYR 2760.0250
PRO 2770.0289
TRP 2780.0324
GLN 2790.0324
THR 2800.0352
SER 2810.0314
LYS 2820.0243
CYS 2830.0224
PHE 2840.0188
ASP 2880.0564
TYR 2890.0255
GLN 2900.0122
TYR 2910.0286
CYS 2970.0347
ASN 2980.0218
PRO 2990.0188
GLY 3000.0152
LYS 3010.0139
LYS 3020.0132
ASN 3030.0097
THR 3040.0116
ILE 3050.0134
SER 3060.0140
GLY 3070.0116
TYR 3080.0135
LYS 3090.0150
ARG 3100.0133
MET 3110.0126
MET 3120.0140
ALA 3130.0155
THR 3140.0140
LYS 3150.0131
ASP 3160.0137
SER 3170.0125
PHE 3180.0085
GLN 3190.0065
SER 3200.0040
PHE 3210.0059
ASN 3220.0064
LEU 3230.0065
THR 3240.0076
GLU 3250.0080
PRO 3260.0069
HIS 3270.0063
ILE 3280.0069
THR 3290.0074
THR 3300.0100
ASN 3310.0115
LYS 3320.0080
LEU 3330.0068
GLU 3340.0064
TRP 3350.0061
ILE 3360.0070
ASP 3370.0057
PRO 3380.0082
ASP 3390.0078
GLY 3400.0080
ASN 3410.0071
THR 3420.0077
ARG 3430.0092
GLY 3440.0170
GLY 3450.0275
GLY 3460.0346
GLY 10.0026
SER 20.0022
HIS 30.0016
SER 40.0010
MET 50.0008
ARG 60.0008
TYR 70.0014
PHE 80.0019
PHE 90.0026
THR 100.0032
SER 110.0039
VAL 120.0043
SER 130.0050
ARG 140.0054
PRO 150.0061
GLY 160.0065
ARG 170.0060
GLY 180.0059
GLU 190.0056
PRO 200.0050
ARG 210.0046
PHE 220.0040
ILE 230.0033
ALA 240.0027
VAL 250.0021
GLY 260.0016
TYR 270.0011
VAL 280.0010
ASP 290.0008
ASP 300.0007
THR 310.0013
GLN 320.0016
PHE 330.0021
VAL 340.0024
ARG 350.0028
PHE 360.0035
ASP 370.0040
SER 380.0046
ASP 390.0051
ALA 400.0049
ALA 410.0058
SER 420.0054
GLN 430.0052
ARG 440.0046
MET 450.0038
GLU 460.0036
PRO 470.0033
ARG 480.0028
ALA 490.0027
PRO 500.0034
TRP 510.0034
ILE 520.0033
GLU 530.0041
GLN 540.0045
GLU 550.0042
GLY 560.0048
PRO 570.0051
GLU 580.0047
TYR 590.0040
TRP 600.0042
ASP 610.0046
GLY 620.0039
GLU 630.0035
THR 640.0041
ARG 650.0042
LYS 660.0034
VAL 670.0035
LYS 680.0043
ALA 690.0040
HIS 700.0035
SER 710.0040
GLN 720.0046
THR 730.0044
HIS 740.0042
ARG 750.0049
VAL 760.0053
ASP 770.0049
LEU 780.0051
GLY 790.0058
THR 800.0057
LEU 810.0054
ARG 820.0061
GLY 830.0067
TYR 840.0063
TYR 850.0065
ASN 860.0073
GLN 870.0067
SER 880.0068
GLU 890.0064
ALA 900.0060
GLY 910.0061
SER 920.0054
HIS 930.0050
THR 940.0042
VAL 950.0039
GLN 960.0031
ARG 970.0025
MET 980.0018
TYR 990.0012
GLY 1000.0006
CYS 1010.0009
ASP 1020.0014
VAL 1030.0020
GLY 1040.0027
SER 1050.0031
ASP 1060.0035
TRP 1070.0028
ARG 1080.0027
PHE 1090.0022
LEU 1100.0023
ARG 1110.0017
GLY 1120.0012
TYR 1130.0014
HIS 1140.0016
GLN 1150.0022
TYR 1160.0028
ALA 1170.0034
TYR 1180.0042
ASP 1190.0045
GLY 1200.0040
LYS 1210.0042
ASP 1220.0037
TYR 1230.0037
ILE 1240.0031
ALA 1250.0024
LEU 1260.0022
LYS 1270.0025
GLU 1280.0023
ASP 1290.0021
LEU 1300.0015
ARG 1310.0016
SER 1320.0022
TRP 1330.0025
THR 1340.0031
ALA 1350.0036
ALA 1360.0039
ASP 1370.0042
MET 1380.0043
ALA 1390.0042
ALA 1400.0035
GLN 1410.0038
THR 1420.0039
THR 1430.0034
LYS 1440.0030
HIS 1450.0031
LYS 1460.0032
TRP 1470.0025
GLU 1480.0023
ALA 1490.0024
ALA 1500.0023
HIS 1510.0016
VAL 1520.0017
ALA 1530.0013
GLU 1540.0008
GLN 1550.0010
LEU 1560.0009
ARG 1570.0007
ALA 1580.0009
TYR 1590.0009
LEU 1600.0007
GLU 1610.0013
GLY 1620.0016
THR 1630.0016
CYS 1640.0012
VAL 1650.0016
GLU 1660.0023
TRP 1670.0022
LEU 1680.0018
ARG 1690.0026
ARG 1700.0029
TYR 1710.0025
LEU 1720.0026
GLU 1730.0034
ASN 1740.0035
GLY 1750.0031
LYS 1760.0031
GLU 1770.0031
THR 1780.0024
LEU 1790.0020
GLN 1800.0024
ARG 1810.0014
THR 1820.0013
ASP 1830.0012
ALA 1840.0014
PRO 1850.0012
LYS 1860.0012
THR 1870.0011
HIS 1880.0010
MET 1890.0009
THR 1900.0009
HIS 1910.0010
HIS 1920.0011
ALA 1930.0014
VAL 1940.0016
SER 1950.0020
ASP 1960.0023
HIS 1970.0021
GLU 1980.0016
ALA 1990.0013
THR 2000.0011
LEU 2010.0010
ARG 2020.0010
CYS 2030.0011
TRP 2040.0011
ALA 2050.0013
LEU 2060.0009
SER 2070.0008
PHE 2080.0008
TYR 2090.0008
PRO 2100.0009
ALA 2110.0011
GLU 2120.0017
ILE 2130.0018
THR 2140.0023
LEU 2150.0021
THR 2160.0024
TRP 2170.0019
GLN 2180.0019
ARG 2190.0016
ASP 2200.0018
GLY 2210.0025
GLU 2220.0025
ASP 2230.0026
GLN 2240.0023
THR 2250.0028
GLN 2260.0026
ASP 2270.0021
THR 2280.0021
GLU 2290.0021
LEU 2300.0023
VAL 2310.0016
GLU 2320.0015
THR 2330.0013
ARG 2340.0012
PRO 2350.0010
ALA 2360.0009
GLY 2370.0009
ASP 2380.0008
GLY 2390.0007
THR 2400.0007
PHE 2410.0009
GLN 2420.0010
LYS 2430.0012
TRP 2440.0013
ALA 2450.0016
ALA 2460.0015
VAL 2470.0014
VAL 2480.0013
VAL 2490.0012
PRO 2500.0014
SER 2510.0013
GLY 2520.0011
GLN 2530.0009
GLU 2540.0009
GLN 2550.0011
ARG 2560.0012
TYR 2570.0012
THR 2580.0016
CYS 2590.0017
HIS 2600.0022
VAL 2610.0020
GLN 2620.0022
HIS 2630.0019
GLU 2640.0020
GLY 2650.0018
LEU 2660.0023
PRO 2670.0030
LYS 2680.0031
PRO 2690.0027
LEU 2700.0023
THR 2710.0021
LEU 2720.0018
ARG 2730.0015
TRP 2740.0012
GLU 2750.0013
PRO 2760.0018
GLN 2780.0030
ARG 2790.0027
THR 2800.0020
PRO 2810.0017
LYS 2820.0018
ILE 2830.0012
GLN 2840.0012
VAL 2850.0010
TYR 2860.0010
SER 2870.0010
ARG 2880.0010
HIS 2890.0010
PRO 2900.0010
ALA 2910.0010
GLU 2920.0010
ASN 2930.0009
GLY 2940.0009
LYS 2950.0010
SER 2960.0010
ASN 2970.0010
PHE 2980.0009
LEU 2990.0009
ASN 3000.0011
CYS 3010.0012
TYR 3020.0013
VAL 3030.0016
SER 3040.0021
GLY 3050.0026
PHE 3060.0027
HIS 3070.0031
PRO 3080.0033
SER 3090.0030
ASP 3100.0025
ILE 3110.0016
GLU 3120.0011
VAL 3130.0007
ASP 3140.0007
LEU 3150.0007
LEU 3160.0005
LYS 3170.0006
ASN 3180.0006
GLY 3190.0006
GLU 3200.0007
ARG 3210.0007
ILE 3220.0008
GLU 3230.0009
LYS 3240.0010
VAL 3250.0010
GLU 3260.0013
HIS 3270.0015
SER 3280.0018
ASP 3290.0021
LEU 3300.0024
SER 3310.0020
PHE 3320.0022
SER 3330.0023
LYS 3340.0025
ASP 3350.0033
TRP 3360.0031
SER 3370.0035
PHE 3380.0026
TYR 3390.0022
LEU 3400.0018
LEU 3410.0014
TYR 3420.0013
TYR 3430.0011
THR 3440.0010
GLU 3450.0010
PHE 3460.0009
THR 3470.0009
PRO 3480.0009
THR 3490.0009
GLU 3500.0007
LYS 3510.0006
ASP 3520.0006
GLU 3530.0005
TYR 3540.0006
ALA 3550.0005
CYS 3560.0005
ARG 3570.0005
VAL 3580.0004
ASN 3590.0005
HIS 3600.0009
VAL 3610.0011
THR 3620.0018
LEU 3630.0027
SER 3640.0043
GLN 3650.0038
PRO 3660.0027
LYS 3670.0019
ILE 3680.0007
VAL 3690.0005
LYS 3700.0005
TRP 3710.0007
ASP 3720.0008
ARG 3730.0009
ASP 3740.0009
MET 3750.0009
SER 10.0059
GLN 20.0055
PHE 30.0057
ARG 40.0058
VAL 50.0064
SER 60.0072
PRO 70.0075
LEU 80.0076
ASP 90.0082
ARG 100.0082
THR 110.0079
TRP 120.0077
ASN 130.0076
LEU 140.0072
GLY 150.0076
GLU 160.0079
THR 170.0077
VAL 180.0074
GLU 190.0075
LEU 200.0072
LYS 210.0066
CYS 220.0062
GLN 230.0058
VAL 240.0055
LEU 250.0053
LEU 260.0046
SER 270.0037
ASN 280.0033
PRO 290.0039
THR 300.0035
SER 310.0041
GLY 320.0047
CYS 330.0052
SER 340.0053
TRP 350.0059
LEU 360.0059
PHE 370.0061
GLN 380.0061
PRO 390.0063
ARG 400.0066
GLY 410.0066
ALA 420.0066
ALA 430.0057
ALA 440.0055
SER 450.0049
PRO 460.0051
THR 470.0050
PHE 480.0049
LEU 490.0055
LEU 500.0056
TYR 510.0052
LEU 520.0054
SER 530.0050
GLN 540.0049
ASN 550.0050
LYS 560.0057
PRO 570.0057
LYS 580.0051
ALA 590.0054
ALA 600.0049
GLU 610.0043
GLY 620.0048
LEU 630.0054
ASP 640.0062
THR 650.0065
GLN 660.0069
ARG 670.0070
PHE 680.0065
SER 690.0065
GLY 700.0064
LYS 710.0061
ARG 720.0059
LEU 730.0061
GLY 740.0057
ASP 750.0056
THR 760.0062
PHE 770.0062
VAL 780.0066
LEU 790.0066
THR 800.0070
LEU 810.0069
SER 820.0074
ASP 830.0075
PHE 840.0073
ARG 850.0071
ARG 860.0065
GLU 870.0063
ASN 880.0067
GLU 890.0067
GLY 900.0070
TYR 910.0069
TYR 920.0068
PHE 930.0065
CYS 940.0062
SER 950.0056
ALA 960.0050
LEU 970.0042
SER 980.0040
ASN 990.0033
SER 1000.0031
ILE 1010.0042
MET 1020.0045
TYR 1030.0054
PHE 1040.0060
SER 1050.0068
HIS 1060.0068
PHE 1070.0068
VAL 1080.0071
PRO 1090.0073
VAL 1100.0073
PHE 1110.0068
LEU 1120.0067
PRO 1130.0069
ALA 1140.0064
SER 10.0011
GLN 20.0009
PHE 30.0013
ARG 40.0026
VAL 50.0038
SER 60.0057
PRO 70.0070
LEU 80.0063
ASP 90.0079
ARG 100.0094
THR 110.0106
TRP 120.0118
ASN 130.0138
LEU 140.0148
GLY 150.0148
GLU 160.0134
THR 170.0118
VAL 180.0099
GLU 190.0085
LEU 200.0066
LYS 210.0054
CYS 220.0037
GLN 230.0032
VAL 240.0019
LEU 250.0023
LEU 260.0018
SER 270.0030
ASN 280.0029
PRO 290.0020
THR 300.0020
SER 310.0012
GLY 320.0011
CYS 330.0018
SER 340.0029
TRP 350.0041
LEU 360.0046
PHE 370.0061
GLN 380.0070
PRO 390.0084
ARG 400.0087
GLY 410.0077
ALA 420.0081
ALA 430.0085
ALA 440.0076
SER 450.0069
PRO 460.0063
THR 470.0064
PHE 480.0053
LEU 490.0053
LEU 500.0041
TYR 510.0030
LEU 520.0026
SER 530.0018
GLN 540.0020
ASN 550.0022
LYS 560.0031
PRO 570.0034
LYS 580.0036
ALA 590.0048
ALA 600.0055
GLU 610.0072
GLY 620.0087
LEU 630.0082
ASP 640.0094
THR 650.0082
GLN 660.0102
ARG 670.0103
PHE 680.0084
SER 690.0073
GLY 700.0060
LYS 710.0055
ARG 720.0047
LEU 730.0058
GLY 740.0053
ASP 750.0040
THR 760.0043
PHE 770.0042
VAL 780.0057
LEU 790.0063
THR 800.0080
LEU 810.0096
SER 820.0116
ASP 830.0132
PHE 840.0124
ARG 850.0135
ARG 860.0139
GLU 870.0129
ASN 880.0108
GLU 890.0104
GLY 900.0085
TYR 910.0066
TYR 920.0057
PHE 930.0041
CYS 940.0029
SER 950.0024
ALA 960.0018
LEU 970.0021
SER 980.0023
ASN 990.0033
SER 1000.0037
ILE 1010.0037
MET 1020.0034
TYR 1030.0027
PHE 1040.0029
SER 1050.0026
HIS 1060.0029
PHE 1070.0046
VAL 1080.0054
PRO 1090.0071
VAL 1100.0084
PHE 1110.0102
LEU 1120.0123
PRO 1130.0128
ALA 1140.0133

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.