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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0830
MET 10.0016
SER 20.0009
THR 30.0009
ILE 40.0005
THR 50.0009
LYS 60.0009
ASP 70.0010
GLN 80.0007
ILE 90.0002
LEU 100.0005
GLU 110.0007
GLY 120.0008
VAL 130.0003
ALA 140.0003
ALA 150.0009
LEU 160.0014
SER 170.0022
VAL 180.0024
MET 190.0025
GLU 200.0018
ILE 210.0010
VAL 220.0014
GLU 230.0012
LEU 240.0006
ILE 250.0007
SER 260.0004
ALA 270.0011
MET 280.0014
GLU 290.0011
GLU 300.0013
LYS 310.0020
PHE 320.0022
GLY 330.0017
VAL 340.0019
SER 350.0016
ALA 360.0034
ALA 370.0025
ALA 380.0006
VAL 390.0021
ALA 400.0021
ALA 410.0019
GLY 420.0036
PRO 430.0059
ALA 440.0068
ALA 450.0042
ALA 460.0025
VAL 470.0033
GLU 480.0037
ALA 490.0027
ALA 500.0024
GLU 510.0026
GLU 520.0025
GLN 530.0019
THR 540.0029
GLU 550.0022
PHE 560.0016
ASP 570.0007
VAL 580.0014
VAL 590.0022
LEU 600.0031
ALA 610.0041
SER 620.0052
PHE 630.0052
GLY 640.0066
GLU 650.0075
ASN 660.0064
LYS 670.0055
VAL 680.0047
ALA 690.0044
VAL 700.0039
ILE 710.0031
LYS 720.0025
ALA 730.0026
VAL 740.0016
ARG 750.0008
GLY 760.0015
ALA 770.0017
THR 780.0012
GLY 790.0019
LEU 800.0022
GLY 810.0031
LEU 820.0033
LYS 830.0047
GLU 840.0040
ALA 850.0028
LYS 860.0043
ASP 870.0047
LEU 880.0035
VAL 890.0038
GLU 900.0050
SER 910.0044
ALA 920.0039
PRO 930.0034
ALA 940.0029
VAL 950.0021
LEU 960.0011
LYS 970.0006
GLU 980.0012
GLY 990.0021
VAL 1000.0026
ASN 1010.0040
LYS 1020.0044
ASP 1030.0056
GLU 1040.0044
ALA 1050.0034
GLU 1060.0050
THR 1070.0050
LEU 1080.0035
LYS 1090.0043
LYS 1100.0056
SER 1110.0046
LEU 1120.0041
GLU 1130.0057
GLU 1140.0062
ALA 1150.0053
GLY 1160.0062
ALA 1170.0052
SER 1180.0054
VAL 1190.0041
GLU 1200.0037
ILE 1210.0030
LYS 1220.0022
GLU 1230.0013
ALA 1240.0006
ALA 1250.0013
ALA 1260.0020
LYS 1270.0024
ALA 1280.0025
TYR 1290.0027
LYS 1300.0030
ILE 1310.0039
ILE 1320.0050
SER 1330.0052
LEU 1340.0064
LYS 1350.0068
TYR 1360.0090
THR 1370.0087
ARG 1380.0083
LYS 1390.0084
VAL 1400.0077
CYS 1410.0071
ILE 1420.0061
GLY 1430.0069
PRO 1440.0068
GLY 1450.0077
PRO 1460.0087
GLY 1470.0085
LYS 1480.0077
ALA 1490.0073
TYR 1500.0071
LYS 1510.0070
ILE 1520.0072
ILE 1530.0066
SER 1540.0068
LEU 1550.0064
LYS 1560.0061
TYR 1570.0058
THR 1580.0046
ARG 1590.0050
LYS 1600.0042
VAL 1610.0061
CYS 1620.0067
GLY 1630.0091
PRO 1640.0129
GLY 1650.0142
PRO 1660.0183
GLY 1670.0200
GLY 1680.0185
LYS 1690.0162
ALA 1700.0131
TYR 1710.0106
LYS 1720.0088
ILE 1730.0062
ILE 1740.0055
SER 1750.0035
LEU 1760.0045
LYS 1770.0047
TYR 1780.0051
THR 1790.0058
ARG 1800.0063
LYS 1810.0071
VAL 1820.0072
GLY 1830.0077
PRO 1840.0082
GLY 1850.0084
PRO 1860.0081
GLY 1870.0074
ILE 1880.0079
ILE 1890.0073
SER 1900.0082
LEU 1910.0078
LYS 1920.0073
TYR 1930.0068
THR 1940.0061
ARG 1950.0061
LYS 1960.0043
VAL 1970.0046
CYS 1980.0041
ILE 1990.0045
GLN 2000.0042
LEU 2010.0025
GLY 2020.0026
GLY 2030.0025
PRO 2040.0020
GLY 2050.0019
PRO 2060.0018
GLY 2070.0020
ASN 2080.0021
ILE 2090.0017
LYS 2100.0018
THR 2110.0029
ALA 2120.0027
PHE 2130.0025
HIS 2140.0028
CYS 2150.0030
TYR 2160.0034
ALA 2170.0037
ALA 2180.0037
TYR 2190.0034
MET 2200.0033
THR 2210.0043
SER 2220.0035
ILE 2230.0041
LYS 2240.0046
ALA 2250.0054
CYS 2260.0116
ASP 2270.0102
LEU 2280.0175
LYS 2290.0262
LYS 2300.0342
PRO 2310.0480
LEU 2320.0439
MET 2330.0357
GLU 2340.0320
SER 2350.0276
GLY 2360.0110
TRP 2370.0135
SER 2380.0177
ASP 2390.0220
THR 2400.0268
ALA 2410.0497
HIS 2420.0568
GLY 2430.0678
LYS 2440.0313
LYS 2450.0640
SER 2460.0806
LEU 2470.0447
PRO 2480.0148
SER 2490.0376
SER 2500.0498
SER 2510.0283
SER 2520.0199
TYR 2530.0150
SER 2540.0130
TYR 2550.0154
ARG 2560.0036
ARG 2570.0040
LYS 2580.0050
LEU 2590.0057
THR 2600.0068
ASN 2610.0127
PRO 2620.0174
ALA 2630.0231
ASN 2640.0189
LYS 2650.0164
GLU 2660.0059
GLU 2670.0081
SER 2680.0124
ILE 2690.0215
LYS 2700.0280
LYS 2710.0314
GLN 2720.0366
LYS 2730.0231
TYR 2740.0282
SER 2750.0189
TYR 2760.0331
PRO 2770.0306
TRP 2780.0300
GLN 2790.0311
THR 2800.0367
SER 2810.0225
LYS 2820.0305
CYS 2830.0461
PHE 2840.0611
ASP 2880.0830
TYR 2890.0380
GLN 2900.0339
TYR 2910.0205
CYS 2970.0099
ASN 2980.0099
PRO 2990.0091
GLY 3000.0091
LYS 3010.0099
LYS 3020.0096
ASN 3030.0085
THR 3040.0080
ILE 3050.0082
SER 3060.0073
GLY 3070.0076
TYR 3080.0076
LYS 3090.0077
ARG 3100.0079
MET 3110.0079
MET 3120.0075
ALA 3130.0076
THR 3140.0068
LYS 3150.0073
ASP 3160.0075
SER 3170.0063
PHE 3180.0058
GLN 3190.0063
SER 3200.0061
PHE 3210.0065
ASN 3220.0056
LEU 3230.0060
THR 3240.0069
GLU 3250.0072
PRO 3260.0064
HIS 3270.0064
ILE 3280.0055
THR 3290.0054
THR 3300.0048
ASN 3310.0046
LYS 3320.0049
LEU 3330.0049
GLU 3340.0059
TRP 3350.0061
ILE 3360.0070
ASP 3370.0060
PRO 3380.0086
ASP 3390.0089
GLY 3400.0082
ASN 3410.0079
THR 3420.0095
ARG 3430.0139
GLY 3440.0203
GLY 3450.0311
GLY 3460.0374
GLY 10.0026
SER 20.0025
HIS 30.0022
SER 40.0019
MET 50.0017
ARG 60.0014
TYR 70.0012
PHE 80.0009
PHE 90.0008
THR 100.0007
SER 110.0008
VAL 120.0009
SER 130.0010
ARG 140.0012
PRO 150.0013
GLY 160.0015
ARG 170.0014
GLY 180.0013
GLU 190.0012
PRO 200.0012
ARG 210.0013
PHE 220.0012
ILE 230.0011
ALA 240.0011
VAL 250.0011
GLY 260.0014
TYR 270.0014
VAL 280.0017
ASP 290.0015
ASP 300.0011
THR 310.0012
GLN 320.0012
PHE 330.0016
VAL 340.0017
ARG 350.0015
PHE 360.0016
ASP 370.0016
SER 380.0018
ASP 390.0020
ALA 400.0022
ALA 410.0028
SER 420.0028
GLN 430.0026
ARG 440.0026
MET 450.0023
GLU 460.0022
PRO 470.0022
ARG 480.0018
ALA 490.0019
PRO 500.0023
TRP 510.0025
ILE 520.0026
GLU 530.0028
GLN 540.0032
GLU 550.0032
GLY 560.0037
PRO 570.0038
GLU 580.0038
TYR 590.0033
TRP 600.0031
ASP 610.0033
GLY 620.0031
GLU 630.0026
THR 640.0026
ARG 650.0027
LYS 660.0022
VAL 670.0019
LYS 680.0020
ALA 690.0019
HIS 700.0015
SER 710.0013
GLN 720.0013
THR 730.0010
HIS 740.0009
ARG 750.0010
VAL 760.0010
ASP 770.0009
LEU 780.0010
GLY 790.0011
THR 800.0011
LEU 810.0011
ARG 820.0013
GLY 830.0015
TYR 840.0014
TYR 850.0017
ASN 860.0018
GLN 870.0016
SER 880.0014
GLU 890.0011
ALA 900.0011
GLY 910.0015
SER 920.0013
HIS 930.0011
THR 940.0009
VAL 950.0008
GLN 960.0007
ARG 970.0008
MET 980.0009
TYR 990.0012
GLY 1000.0015
CYS 1010.0019
ASP 1020.0022
VAL 1030.0027
GLY 1040.0030
SER 1050.0032
ASP 1060.0035
TRP 1070.0031
ARG 1080.0032
PHE 1090.0029
LEU 1100.0028
ARG 1110.0022
GLY 1120.0018
TYR 1130.0015
HIS 1140.0011
GLN 1150.0009
TYR 1160.0006
ALA 1170.0008
TYR 1180.0009
ASP 1190.0011
GLY 1200.0011
LYS 1210.0011
ASP 1220.0010
TYR 1230.0009
ILE 1240.0008
ALA 1250.0009
LEU 1260.0011
LYS 1270.0014
GLU 1280.0016
ASP 1290.0019
LEU 1300.0016
ARG 1310.0017
SER 1320.0014
TRP 1330.0011
THR 1340.0011
ALA 1350.0010
ALA 1360.0013
ASP 1370.0012
MET 1380.0011
ALA 1390.0011
ALA 1400.0008
GLN 1410.0008
THR 1420.0007
THR 1430.0007
LYS 1440.0007
HIS 1450.0008
LYS 1460.0009
TRP 1470.0010
GLU 1480.0011
ALA 1490.0012
ALA 1500.0013
HIS 1510.0015
VAL 1520.0013
ALA 1530.0015
GLU 1540.0018
GLN 1550.0018
LEU 1560.0016
ARG 1570.0020
ALA 1580.0022
TYR 1590.0021
LEU 1600.0021
GLU 1610.0026
GLY 1620.0028
THR 1630.0026
CYS 1640.0024
VAL 1650.0027
GLU 1660.0031
TRP 1670.0028
LEU 1680.0026
ARG 1690.0029
ARG 1700.0030
TYR 1710.0026
LEU 1720.0026
GLU 1730.0030
ASN 1740.0029
GLY 1750.0024
LYS 1760.0025
GLU 1770.0021
THR 1780.0017
LEU 1790.0018
GLN 1800.0021
ARG 1810.0011
THR 1820.0010
ASP 1830.0007
ALA 1840.0007
PRO 1850.0006
LYS 1860.0003
THR 1870.0003
HIS 1880.0004
MET 1890.0005
THR 1900.0006
HIS 1910.0007
HIS 1920.0009
ALA 1930.0011
VAL 1940.0012
SER 1950.0015
ASP 1960.0015
HIS 1970.0016
GLU 1980.0014
ALA 1990.0012
THR 2000.0010
LEU 2010.0008
ARG 2020.0007
CYS 2030.0006
TRP 2040.0005
ALA 2050.0004
LEU 2060.0004
SER 2070.0003
PHE 2080.0005
TYR 2090.0007
PRO 2100.0009
ALA 2110.0007
GLU 2120.0008
ILE 2130.0008
THR 2140.0009
LEU 2150.0008
THR 2160.0008
TRP 2170.0008
GLN 2180.0007
ARG 2190.0008
ASP 2200.0006
GLY 2210.0005
GLU 2220.0007
ASP 2230.0008
GLN 2240.0009
THR 2250.0010
GLN 2260.0011
ASP 2270.0010
THR 2280.0009
GLU 2290.0010
LEU 2300.0010
VAL 2310.0006
GLU 2320.0005
THR 2330.0005
ARG 2340.0004
PRO 2350.0004
ALA 2360.0004
GLY 2370.0005
ASP 2380.0005
GLY 2390.0006
THR 2400.0005
PHE 2410.0004
GLN 2420.0004
LYS 2430.0005
TRP 2440.0006
ALA 2450.0008
ALA 2460.0009
VAL 2470.0010
VAL 2480.0011
VAL 2490.0011
PRO 2500.0013
SER 2510.0013
GLY 2520.0012
GLN 2530.0011
GLU 2540.0009
GLN 2550.0008
ARG 2560.0008
TYR 2570.0007
THR 2580.0006
CYS 2590.0006
HIS 2600.0006
VAL 2610.0008
GLN 2620.0009
HIS 2630.0008
GLU 2640.0009
GLY 2650.0008
LEU 2660.0006
PRO 2670.0008
LYS 2680.0007
PRO 2690.0007
LEU 2700.0006
THR 2710.0004
LEU 2720.0004
ARG 2730.0005
TRP 2740.0006
GLU 2750.0007
PRO 2760.0006
GLN 2780.0006
ARG 2790.0006
THR 2800.0006
PRO 2810.0006
LYS 2820.0009
ILE 2830.0006
GLN 2840.0004
VAL 2850.0005
TYR 2860.0005
SER 2870.0007
ARG 2880.0006
HIS 2890.0007
PRO 2900.0008
ALA 2910.0009
GLU 2920.0011
ASN 2930.0012
GLY 2940.0014
LYS 2950.0013
SER 2960.0013
ASN 2970.0010
PHE 2980.0008
LEU 2990.0008
ASN 3000.0007
CYS 3010.0007
TYR 3020.0006
VAL 3030.0006
SER 3040.0007
GLY 3050.0008
PHE 3060.0007
HIS 3070.0007
PRO 3080.0009
SER 3090.0008
ASP 3100.0008
ILE 3110.0009
GLU 3120.0011
VAL 3130.0011
ASP 3140.0012
LEU 3150.0011
LEU 3160.0012
LYS 3170.0012
ASN 3180.0013
GLY 3190.0014
GLU 3200.0016
ARG 3210.0015
ILE 3220.0015
GLU 3230.0017
LYS 3240.0014
VAL 3250.0012
GLU 3260.0009
HIS 3270.0007
SER 3280.0006
ASP 3290.0007
LEU 3300.0007
SER 3310.0006
PHE 3320.0007
SER 3330.0009
LYS 3340.0009
ASP 3350.0010
TRP 3360.0008
SER 3370.0011
PHE 3380.0007
TYR 3390.0007
LEU 3400.0007
LEU 3410.0007
TYR 3420.0006
TYR 3430.0008
THR 3440.0010
GLU 3450.0011
PHE 3460.0012
THR 3470.0012
PRO 3480.0011
THR 3490.0012
GLU 3500.0010
LYS 3510.0010
ASP 3520.0011
GLU 3530.0008
TYR 3540.0009
ALA 3550.0009
CYS 3560.0010
ARG 3570.0012
VAL 3580.0012
ASN 3590.0014
HIS 3600.0011
VAL 3610.0012
THR 3620.0013
LEU 3630.0024
SER 3640.0032
GLN 3650.0031
PRO 3660.0025
LYS 3670.0020
ILE 3680.0012
VAL 3690.0009
LYS 3700.0007
TRP 3710.0005
ASP 3720.0002
ARG 3730.0004
ASP 3740.0005
MET 3750.0004
SER 10.0024
GLN 20.0023
PHE 30.0023
ARG 40.0023
VAL 50.0024
SER 60.0034
PRO 70.0036
LEU 80.0035
ASP 90.0041
ARG 100.0040
THR 110.0044
TRP 120.0045
ASN 130.0049
LEU 140.0049
GLY 150.0050
GLU 160.0044
THR 170.0039
VAL 180.0035
GLU 190.0033
LEU 200.0030
LYS 210.0023
CYS 220.0023
GLN 230.0023
VAL 240.0022
LEU 250.0023
LEU 260.0018
SER 270.0014
ASN 280.0012
PRO 290.0014
THR 300.0011
SER 310.0014
GLY 320.0015
CYS 330.0017
SER 340.0018
TRP 350.0021
LEU 360.0021
PHE 370.0023
GLN 380.0025
PRO 390.0028
ARG 400.0030
GLY 410.0033
ALA 420.0032
ALA 430.0028
ALA 440.0028
SER 450.0024
PRO 460.0021
THR 470.0021
PHE 480.0019
LEU 490.0021
LEU 500.0019
TYR 510.0016
LEU 520.0017
SER 530.0014
GLN 540.0013
ASN 550.0012
LYS 560.0015
PRO 570.0017
LYS 580.0016
ALA 590.0019
ALA 600.0019
GLU 610.0022
GLY 620.0026
LEU 630.0026
ASP 640.0029
THR 650.0027
GLN 660.0029
ARG 670.0030
PHE 680.0026
SER 690.0024
GLY 700.0022
LYS 710.0020
ARG 720.0020
LEU 730.0023
GLY 740.0022
ASP 750.0022
THR 760.0025
PHE 770.0023
VAL 780.0025
LEU 790.0024
THR 800.0026
LEU 810.0030
SER 820.0035
ASP 830.0040
PHE 840.0039
ARG 850.0041
ARG 860.0042
GLU 870.0036
ASN 880.0032
GLU 890.0033
GLY 900.0029
TYR 910.0028
TYR 920.0026
PHE 930.0025
CYS 940.0022
SER 950.0020
ALA 960.0017
LEU 970.0015
SER 980.0015
ASN 990.0015
SER 1000.0014
ILE 1010.0017
MET 1020.0017
TYR 1030.0021
PHE 1040.0023
SER 1050.0027
HIS 1060.0029
PHE 1070.0028
VAL 1080.0031
PRO 1090.0031
VAL 1100.0032
PHE 1110.0036
LEU 1120.0044
PRO 1130.0050
ALA 1140.0051
SER 10.0012
GLN 20.0007
PHE 30.0004
ARG 40.0005
VAL 50.0011
SER 60.0016
PRO 70.0021
LEU 80.0020
ASP 90.0024
ARG 100.0031
THR 110.0038
TRP 120.0045
ASN 130.0053
LEU 140.0060
GLY 150.0061
GLU 160.0053
THR 170.0048
VAL 180.0040
GLU 190.0034
LEU 200.0025
LYS 210.0020
CYS 220.0013
GLN 230.0009
VAL 240.0006
LEU 250.0007
LEU 260.0006
SER 270.0012
ASN 280.0012
PRO 290.0009
THR 300.0011
SER 310.0006
GLY 320.0010
CYS 330.0011
SER 340.0015
TRP 350.0019
LEU 360.0020
PHE 370.0027
GLN 380.0031
PRO 390.0037
ARG 400.0040
GLY 410.0036
ALA 420.0036
ALA 430.0035
ALA 440.0031
SER 450.0027
PRO 460.0027
THR 470.0027
PHE 480.0023
LEU 490.0025
LEU 500.0022
TYR 510.0018
LEU 520.0018
SER 530.0016
GLN 540.0018
ASN 550.0020
LYS 560.0024
PRO 570.0023
LYS 580.0022
ALA 590.0026
ALA 600.0027
GLU 610.0031
GLY 620.0041
LEU 630.0041
ASP 640.0049
THR 650.0045
GLN 660.0054
ARG 670.0051
PHE 680.0042
SER 690.0039
GLY 700.0032
LYS 710.0029
ARG 720.0025
LEU 730.0027
GLY 740.0024
ASP 750.0016
THR 760.0017
PHE 770.0019
VAL 780.0025
LEU 790.0029
THR 800.0036
LEU 810.0044
SER 820.0051
ASP 830.0057
PHE 840.0052
ARG 850.0058
ARG 860.0059
GLU 870.0056
ASN 880.0047
GLU 890.0045
GLY 900.0038
TYR 910.0029
TYR 920.0024
PHE 930.0018
CYS 940.0013
SER 950.0010
ALA 960.0006
LEU 970.0005
SER 980.0004
ASN 990.0007
SER 1000.0008
ILE 1010.0011
MET 1020.0011
TYR 1030.0011
PHE 1040.0013
SER 1050.0012
HIS 1060.0015
PHE 1070.0021
VAL 1080.0022
PRO 1090.0029
VAL 1100.0034
PHE 1110.0042
LEU 1120.0049
PRO 1130.0049
ALA 1140.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.