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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0822
MET 10.0039
SER 20.0020
THR 30.0030
ILE 40.0025
THR 50.0070
LYS 60.0080
ASP 70.0084
GLN 80.0050
ILE 90.0034
LEU 100.0057
GLU 110.0045
GLY 120.0025
VAL 130.0024
ALA 140.0028
ALA 150.0015
LEU 160.0021
SER 170.0024
VAL 180.0021
MET 190.0018
GLU 200.0017
ILE 210.0015
VAL 220.0008
GLU 230.0019
LEU 240.0011
ILE 250.0008
SER 260.0037
ALA 270.0032
MET 280.0015
GLU 290.0053
GLU 300.0061
LYS 310.0034
PHE 320.0056
GLY 330.0096
VAL 340.0110
SER 350.0116
ALA 360.0146
ALA 370.0156
ALA 380.0135
VAL 390.0130
ALA 400.0151
ALA 410.0113
GLY 420.0087
PRO 430.0070
ALA 440.0072
ALA 450.0103
ALA 460.0115
VAL 470.0115
GLU 480.0104
ALA 490.0111
ALA 500.0121
GLU 510.0099
GLU 520.0098
GLN 530.0085
THR 540.0106
GLU 550.0101
PHE 560.0088
ASP 570.0086
VAL 580.0086
VAL 590.0081
LEU 600.0084
ALA 610.0082
SER 620.0097
PHE 630.0107
GLY 640.0122
GLU 650.0141
ASN 660.0140
LYS 670.0138
VAL 680.0150
ALA 690.0139
VAL 700.0122
ILE 710.0130
LYS 720.0137
ALA 730.0122
VAL 740.0119
ARG 750.0134
GLY 760.0134
ALA 770.0125
THR 780.0130
GLY 790.0144
LEU 800.0143
GLY 810.0157
LEU 820.0154
LYS 830.0151
GLU 840.0135
ALA 850.0126
LYS 860.0122
ASP 870.0112
LEU 880.0097
VAL 890.0098
GLU 900.0104
SER 910.0075
ALA 920.0068
PRO 930.0066
ALA 940.0072
VAL 950.0077
LEU 960.0100
LYS 970.0103
GLU 980.0100
GLY 990.0103
VAL 1000.0106
ASN 1010.0114
LYS 1020.0104
ASP 1030.0114
GLU 1040.0117
ALA 1050.0102
GLU 1060.0097
THR 1070.0108
LEU 1080.0108
LYS 1090.0094
LYS 1100.0097
SER 1110.0108
LEU 1120.0105
GLU 1130.0097
GLU 1140.0106
ALA 1150.0118
GLY 1160.0110
ALA 1170.0104
SER 1180.0092
VAL 1190.0086
GLU 1200.0078
ILE 1210.0079
LYS 1220.0070
GLU 1230.0068
ALA 1240.0079
ALA 1250.0069
ALA 1260.0059
LYS 1270.0048
ALA 1280.0057
TYR 1290.0056
LYS 1300.0066
ILE 1310.0081
ILE 1320.0119
SER 1330.0147
LEU 1340.0184
LYS 1350.0219
TYR 1360.0271
THR 1370.0237
ARG 1380.0228
LYS 1390.0196
VAL 1400.0182
CYS 1410.0100
ILE 1420.0107
GLY 1430.0121
PRO 1440.0241
GLY 1450.0354
PRO 1460.0510
GLY 1470.0573
LYS 1480.0474
ALA 1490.0353
TYR 1500.0177
LYS 1510.0102
ILE 1520.0038
ILE 1530.0041
SER 1540.0094
LEU 1550.0154
LYS 1560.0167
TYR 1570.0165
THR 1580.0143
ARG 1590.0141
LYS 1600.0113
VAL 1610.0091
CYS 1620.0027
GLY 1630.0028
PRO 1640.0089
GLY 1650.0117
PRO 1660.0189
GLY 1670.0218
GLY 1680.0183
LYS 1690.0170
ALA 1700.0122
TYR 1710.0089
LYS 1720.0104
ILE 1730.0085
ILE 1740.0132
SER 1750.0134
LEU 1760.0160
LYS 1770.0115
TYR 1780.0072
THR 1790.0049
ARG 1800.0040
LYS 1810.0117
VAL 1820.0185
GLY 1830.0265
PRO 1840.0322
GLY 1850.0286
PRO 1860.0142
GLY 1870.0064
ILE 1880.0075
ILE 1890.0104
SER 1900.0194
LEU 1910.0213
LYS 1920.0199
TYR 1930.0196
THR 1940.0181
ARG 1950.0180
LYS 1960.0132
VAL 1970.0110
CYS 1980.0073
ILE 1990.0064
GLN 2000.0038
LEU 2010.0039
GLY 2020.0037
GLY 2030.0049
PRO 2040.0054
GLY 2050.0051
PRO 2060.0042
GLY 2070.0035
ASN 2080.0040
ILE 2090.0031
LYS 2100.0018
THR 2110.0049
ALA 2120.0046
PHE 2130.0025
HIS 2140.0048
CYS 2150.0063
TYR 2160.0068
ALA 2170.0074
ALA 2180.0072
TYR 2190.0094
MET 2200.0112
THR 2210.0119
SER 2220.0112
ILE 2230.0120
LYS 2240.0119
ALA 2250.0133
CYS 2260.0163
ASP 2270.0178
LEU 2280.0356
LYS 2290.0461
LYS 2300.0638
PRO 2310.0688
LEU 2320.0612
MET 2330.0440
GLU 2340.0379
SER 2350.0386
GLY 2360.0232
TRP 2370.0161
SER 2380.0130
ASP 2390.0116
THR 2400.0104
ALA 2410.0148
HIS 2420.0133
GLY 2430.0104
LYS 2440.0084
LYS 2450.0076
SER 2460.0071
LEU 2470.0087
PRO 2480.0202
SER 2490.0268
SER 2500.0234
SER 2510.0100
SER 2520.0071
TYR 2530.0044
SER 2540.0014
TYR 2550.0029
ARG 2560.0032
ARG 2570.0021
LYS 2580.0022
LEU 2590.0058
THR 2600.0070
ASN 2610.0133
PRO 2620.0159
ALA 2630.0177
ASN 2640.0121
LYS 2650.0145
GLU 2660.0106
GLU 2670.0130
SER 2680.0113
ILE 2690.0111
LYS 2700.0124
LYS 2710.0078
GLN 2720.0070
LYS 2730.0054
TYR 2740.0043
SER 2750.0032
TYR 2760.0009
PRO 2770.0018
TRP 2780.0036
GLN 2790.0044
THR 2800.0067
SER 2810.0094
LYS 2820.0049
CYS 2830.0069
PHE 2840.0074
ASP 2880.0106
TYR 2890.0061
GLN 2900.0047
TYR 2910.0145
CYS 2970.0248
ASN 2980.0209
PRO 2990.0070
GLY 3000.0116
LYS 3010.0077
LYS 3020.0114
ASN 3030.0118
THR 3040.0093
ILE 3050.0156
SER 3060.0205
GLY 3070.0227
TYR 3080.0245
LYS 3090.0223
ARG 3100.0221
MET 3110.0259
MET 3120.0243
ALA 3130.0257
THR 3140.0252
LYS 3150.0238
ASP 3160.0241
SER 3170.0244
PHE 3180.0206
GLN 3190.0172
SER 3200.0144
PHE 3210.0134
ASN 3220.0141
LEU 3230.0158
THR 3240.0185
GLU 3250.0206
PRO 3260.0189
HIS 3270.0207
ILE 3280.0200
THR 3290.0206
THR 3300.0206
ASN 3310.0168
LYS 3320.0156
LEU 3330.0152
GLU 3340.0163
TRP 3350.0163
ILE 3360.0176
ASP 3370.0141
PRO 3380.0193
ASP 3390.0169
GLY 3400.0150
ASN 3410.0122
THR 3420.0176
ARG 3430.0274
GLY 3440.0445
GLY 3450.0680
GLY 3460.0822
GLY 10.0131
SER 20.0120
HIS 30.0103
SER 40.0089
MET 50.0075
ARG 60.0062
TYR 70.0052
PHE 80.0046
PHE 90.0050
THR 100.0052
SER 110.0062
VAL 120.0067
SER 130.0083
ARG 140.0093
PRO 150.0107
GLY 160.0129
ARG 170.0120
GLY 180.0112
GLU 190.0101
PRO 200.0087
ARG 210.0074
PHE 220.0063
ILE 230.0050
ALA 240.0043
VAL 250.0039
GLY 260.0050
TYR 270.0058
VAL 280.0073
ASP 290.0077
ASP 300.0067
THR 310.0068
GLN 320.0053
PHE 330.0053
VAL 340.0042
ARG 350.0039
PHE 360.0048
ASP 370.0059
SER 380.0072
ASP 390.0082
ALA 400.0078
ALA 410.0091
SER 420.0075
GLN 430.0073
ARG 440.0057
MET 450.0044
GLU 460.0043
PRO 470.0046
ARG 480.0054
ALA 490.0066
PRO 500.0077
TRP 510.0079
ILE 520.0062
GLU 530.0059
GLN 540.0066
GLU 550.0057
GLY 560.0049
PRO 570.0041
GLU 580.0051
TYR 590.0051
TRP 600.0043
ASP 610.0053
GLY 620.0061
GLU 630.0053
THR 640.0056
ARG 650.0071
LYS 660.0069
VAL 670.0060
LYS 680.0074
ALA 690.0085
HIS 700.0074
SER 710.0074
GLN 720.0090
THR 730.0091
HIS 740.0080
ARG 750.0090
VAL 760.0096
ASP 770.0084
LEU 780.0082
GLY 790.0095
THR 800.0094
LEU 810.0077
ARG 820.0081
GLY 830.0090
TYR 840.0086
TYR 850.0083
ASN 860.0086
GLN 870.0078
SER 880.0080
GLU 890.0083
ALA 900.0076
GLY 910.0081
SER 920.0075
HIS 930.0070
THR 940.0062
VAL 950.0062
GLN 960.0056
ARG 970.0059
MET 980.0056
TYR 990.0068
GLY 1000.0074
CYS 1010.0094
ASP 1020.0106
VAL 1030.0118
GLY 1040.0134
SER 1050.0142
ASP 1060.0150
TRP 1070.0131
ARG 1080.0136
PHE 1090.0129
LEU 1100.0134
ARG 1110.0116
GLY 1120.0101
TYR 1130.0089
HIS 1140.0080
GLN 1150.0072
TYR 1160.0061
ALA 1170.0056
TYR 1180.0062
ASP 1190.0057
GLY 1200.0046
LYS 1210.0039
ASP 1220.0046
TYR 1230.0062
ILE 1240.0071
ALA 1250.0071
LEU 1260.0093
LYS 1270.0101
GLU 1280.0108
ASP 1290.0128
LEU 1300.0120
ARG 1310.0133
SER 1320.0123
TRP 1330.0104
THR 1340.0089
ALA 1350.0087
ALA 1360.0059
ASP 1370.0065
MET 1380.0081
ALA 1390.0088
ALA 1400.0083
GLN 1410.0104
THR 1420.0117
THR 1430.0105
LYS 1440.0109
HIS 1450.0131
LYS 1460.0135
TRP 1470.0125
GLU 1480.0140
ALA 1490.0154
ALA 1500.0145
HIS 1510.0147
VAL 1520.0126
ALA 1530.0126
GLU 1540.0138
GLN 1550.0125
LEU 1560.0111
ARG 1570.0124
ALA 1580.0124
TYR 1590.0103
LEU 1600.0104
GLU 1610.0122
GLY 1620.0115
THR 1630.0097
CYS 1640.0092
VAL 1650.0105
GLU 1660.0105
TRP 1670.0088
LEU 1680.0092
ARG 1690.0105
ARG 1700.0094
TYR 1710.0087
LEU 1720.0102
GLU 1730.0112
ASN 1740.0097
GLY 1750.0096
LYS 1760.0117
GLU 1770.0117
THR 1780.0097
LEU 1790.0095
GLN 1800.0114
ARG 1810.0093
THR 1820.0081
ASP 1830.0072
ALA 1840.0064
PRO 1850.0051
LYS 1860.0049
THR 1870.0043
HIS 1880.0041
MET 1890.0038
THR 1900.0039
HIS 1910.0038
HIS 1920.0037
ALA 1930.0035
VAL 1940.0032
SER 1950.0032
ASP 1960.0031
HIS 1970.0026
GLU 1980.0025
ALA 1990.0030
THR 2000.0031
LEU 2010.0033
ARG 2020.0032
CYS 2030.0033
TRP 2040.0035
ALA 2050.0038
LEU 2060.0048
SER 2070.0056
PHE 2080.0057
TYR 2090.0063
PRO 2100.0064
ALA 2110.0050
GLU 2120.0050
ILE 2130.0041
THR 2140.0038
LEU 2150.0033
THR 2160.0032
TRP 2170.0030
GLN 2180.0030
ARG 2190.0029
ASP 2200.0030
GLY 2210.0032
GLU 2220.0029
ASP 2230.0029
GLN 2240.0026
THR 2250.0026
GLN 2260.0022
ASP 2270.0023
THR 2280.0023
GLU 2290.0024
LEU 2300.0024
VAL 2310.0026
GLU 2320.0027
THR 2330.0030
ARG 2340.0028
PRO 2350.0032
ALA 2360.0044
GLY 2370.0043
ASP 2380.0053
GLY 2390.0054
THR 2400.0054
PHE 2410.0042
GLN 2420.0036
LYS 2430.0032
TRP 2440.0030
ALA 2450.0029
ALA 2460.0028
VAL 2470.0027
VAL 2480.0026
VAL 2490.0026
PRO 2500.0025
SER 2510.0027
GLY 2520.0027
GLN 2530.0028
GLU 2540.0029
GLN 2550.0030
ARG 2560.0029
TYR 2570.0030
THR 2580.0031
CYS 2590.0033
HIS 2600.0034
VAL 2610.0035
GLN 2620.0044
HIS 2630.0053
GLU 2640.0068
GLY 2650.0068
LEU 2660.0060
PRO 2670.0067
LYS 2680.0055
PRO 2690.0046
LEU 2700.0041
THR 2710.0037
LEU 2720.0037
ARG 2730.0036
TRP 2740.0035
GLU 2750.0036
PRO 2760.0041
GLN 2780.0046
ARG 2790.0044
THR 2800.0041
PRO 2810.0039
LYS 2820.0039
ILE 2830.0030
GLN 2840.0027
VAL 2850.0031
TYR 2860.0037
SER 2870.0046
ARG 2880.0050
HIS 2890.0061
PRO 2900.0066
ALA 2910.0068
GLU 2920.0081
ASN 2930.0088
GLY 2940.0095
LYS 2950.0090
SER 2960.0080
ASN 2970.0067
PHE 2980.0052
LEU 2990.0046
ASN 3000.0037
CYS 3010.0032
TYR 3020.0029
VAL 3030.0032
SER 3040.0035
GLY 3050.0039
PHE 3060.0040
HIS 3070.0044
PRO 3080.0050
SER 3090.0044
ASP 3100.0043
ILE 3110.0041
GLU 3120.0040
VAL 3130.0037
ASP 3140.0042
LEU 3150.0044
LEU 3160.0054
LYS 3170.0064
ASN 3180.0074
GLY 3190.0071
GLU 3200.0073
ARG 3210.0064
ILE 3220.0060
GLU 3230.0061
LYS 3240.0054
VAL 3250.0046
GLU 3260.0040
HIS 3270.0036
SER 3280.0042
ASP 3290.0037
LEU 3300.0035
SER 3310.0035
PHE 3320.0038
SER 3330.0031
LYS 3340.0028
ASP 3350.0030
TRP 3360.0041
SER 3370.0040
PHE 3380.0039
TYR 3390.0034
LEU 3400.0032
LEU 3410.0032
TYR 3420.0034
TYR 3430.0039
THR 3440.0049
GLU 3450.0060
PHE 3460.0067
THR 3470.0077
PRO 3480.0074
THR 3490.0084
GLU 3500.0085
LYS 3510.0086
ASP 3520.0078
GLU 3530.0062
TYR 3540.0051
ALA 3550.0042
CYS 3560.0035
ARG 3570.0042
VAL 3580.0041
ASN 3590.0040
HIS 3600.0042
VAL 3610.0045
THR 3620.0052
LEU 3630.0060
SER 3640.0066
GLN 3650.0062
PRO 3660.0057
LYS 3670.0064
ILE 3680.0041
VAL 3690.0031
LYS 3700.0036
TRP 3710.0036
ASP 3720.0037
ARG 3730.0047
ASP 3740.0046
MET 3750.0037
SER 10.0039
GLN 20.0025
PHE 30.0028
ARG 40.0027
VAL 50.0042
SER 60.0062
PRO 70.0078
LEU 80.0084
ASP 90.0104
ARG 100.0113
THR 110.0124
TRP 120.0128
ASN 130.0139
LEU 140.0140
GLY 150.0144
GLU 160.0136
THR 170.0120
VAL 180.0105
GLU 190.0090
LEU 200.0076
LYS 210.0057
CYS 220.0047
GLN 230.0033
VAL 240.0026
LEU 250.0017
LEU 260.0021
SER 270.0014
ASN 280.0013
PRO 290.0019
THR 300.0019
SER 310.0037
GLY 320.0045
CYS 330.0049
SER 340.0052
TRP 350.0059
LEU 360.0067
PHE 370.0071
GLN 380.0069
PRO 390.0075
ARG 400.0080
GLY 410.0075
ALA 420.0071
ALA 430.0064
ALA 440.0065
SER 450.0060
PRO 460.0055
THR 470.0059
PHE 480.0058
LEU 490.0068
LEU 500.0068
TYR 510.0054
LEU 520.0051
SER 530.0046
GLN 540.0044
ASN 550.0049
LYS 560.0066
PRO 570.0067
LYS 580.0066
ALA 590.0072
ALA 600.0070
GLU 610.0079
GLY 620.0095
LEU 630.0096
ASP 640.0113
THR 650.0111
GLN 660.0122
ARG 670.0117
PHE 680.0101
SER 690.0092
GLY 700.0077
LYS 710.0062
ARG 720.0050
LEU 730.0046
GLY 740.0035
ASP 750.0030
THR 760.0041
PHE 770.0051
VAL 780.0065
LEU 790.0076
THR 800.0089
LEU 810.0106
SER 820.0119
ASP 830.0130
PHE 840.0124
ARG 850.0128
ARG 860.0125
GLU 870.0119
ASN 880.0108
GLU 890.0105
GLY 900.0095
TYR 910.0077
TYR 920.0073
PHE 930.0065
CYS 940.0058
SER 950.0048
ALA 960.0037
LEU 970.0031
SER 980.0027
ASN 990.0021
SER 1000.0021
ILE 1010.0025
MET 1020.0032
TYR 1030.0038
PHE 1040.0045
SER 1050.0052
HIS 1060.0053
PHE 1070.0064
VAL 1080.0072
PRO 1090.0084
VAL 1100.0093
PHE 1110.0111
LEU 1120.0123
PRO 1130.0137
ALA 1140.0129
SER 10.0028
GLN 20.0026
PHE 30.0011
ARG 40.0006
VAL 50.0017
SER 60.0035
PRO 70.0049
LEU 80.0045
ASP 90.0061
ARG 100.0075
THR 110.0088
TRP 120.0098
ASN 130.0117
LEU 140.0125
GLY 150.0124
GLU 160.0110
THR 170.0094
VAL 180.0077
GLU 190.0063
LEU 200.0044
LYS 210.0032
CYS 220.0016
GLN 230.0018
VAL 240.0019
LEU 250.0029
LEU 260.0032
SER 270.0044
ASN 280.0046
PRO 290.0035
THR 300.0034
SER 310.0029
GLY 320.0015
CYS 330.0006
SER 340.0014
TRP 350.0022
LEU 360.0033
PHE 370.0048
GLN 380.0060
PRO 390.0074
ARG 400.0081
GLY 410.0079
ALA 420.0082
ALA 430.0081
ALA 440.0071
SER 450.0062
PRO 460.0052
THR 470.0047
PHE 480.0036
LEU 490.0032
LEU 500.0020
TYR 510.0009
LEU 520.0006
SER 530.0008
GLN 540.0014
ASN 550.0007
LYS 560.0012
PRO 570.0012
LYS 580.0013
ALA 590.0022
ALA 600.0030
GLU 610.0044
GLY 620.0058
LEU 630.0054
ASP 640.0065
THR 650.0056
GLN 660.0076
ARG 670.0077
PHE 680.0059
SER 690.0050
GLY 700.0039
LYS 710.0038
ARG 720.0035
LEU 730.0047
GLY 740.0048
ASP 750.0035
THR 760.0030
PHE 770.0025
VAL 780.0036
LEU 790.0041
THR 800.0057
LEU 810.0072
SER 820.0091
ASP 830.0107
PHE 840.0101
ARG 850.0112
ARG 860.0118
GLU 870.0108
ASN 880.0088
GLU 890.0088
GLY 900.0073
TYR 910.0056
TYR 920.0043
PHE 930.0030
CYS 940.0018
SER 950.0024
ALA 960.0024
LEU 970.0032
SER 980.0038
ASN 990.0047
SER 1000.0048
ILE 1010.0049
MET 1020.0042
TYR 1030.0036
PHE 1040.0033
SER 1050.0026
HIS 1060.0030
PHE 1070.0040
VAL 1080.0041
PRO 1090.0059
VAL 1100.0068
PHE 1110.0087
LEU 1120.0106
PRO 1130.0111
ALA 1140.0120

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.