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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0527
MET 10.0212
SER 20.0112
THR 30.0148
ILE 40.0109
THR 50.0263
LYS 60.0289
ASP 70.0309
GLN 80.0190
ILE 90.0109
LEU 100.0193
GLU 110.0158
GLY 120.0094
VAL 130.0066
ALA 140.0075
ALA 150.0058
LEU 160.0131
SER 170.0191
VAL 180.0188
MET 190.0172
GLU 200.0122
ILE 210.0088
VAL 220.0050
GLU 230.0051
LEU 240.0022
ILE 250.0055
SER 260.0144
ALA 270.0125
MET 280.0086
GLU 290.0215
GLU 300.0252
LYS 310.0161
PHE 320.0218
GLY 330.0358
VAL 340.0394
SER 350.0413
ALA 360.0493
ALA 370.0527
ALA 380.0452
VAL 390.0439
ALA 400.0511
ALA 410.0414
GLY 420.0358
PRO 430.0322
ALA 440.0317
ALA 450.0324
ALA 460.0369
VAL 470.0365
GLU 480.0304
ALA 490.0377
ALA 500.0432
GLU 510.0299
GLU 520.0271
GLN 530.0218
THR 540.0202
GLU 550.0149
PHE 560.0145
ASP 570.0120
VAL 580.0108
VAL 590.0100
LEU 600.0087
ALA 610.0108
SER 620.0092
PHE 630.0071
GLY 640.0073
GLU 650.0074
ASN 660.0058
LYS 670.0055
VAL 680.0058
ALA 690.0052
VAL 700.0049
ILE 710.0053
LYS 720.0071
ALA 730.0073
VAL 740.0075
ARG 750.0089
GLY 760.0100
ALA 770.0104
THR 780.0109
GLY 790.0121
LEU 800.0104
GLY 810.0106
LEU 820.0090
LYS 830.0076
GLU 840.0069
ALA 850.0064
LYS 860.0052
ASP 870.0049
LEU 880.0062
VAL 890.0053
GLU 900.0060
SER 910.0072
ALA 920.0077
PRO 930.0092
ALA 940.0090
VAL 950.0102
LEU 960.0083
LYS 970.0101
GLU 980.0115
GLY 990.0140
VAL 1000.0144
ASN 1010.0178
LYS 1020.0188
ASP 1030.0189
GLU 1040.0159
ALA 1050.0146
GLU 1060.0161
THR 1070.0145
LEU 1080.0116
LYS 1090.0120
LYS 1100.0122
SER 1110.0095
LEU 1120.0079
GLU 1130.0093
GLU 1140.0077
ALA 1150.0057
GLY 1160.0066
ALA 1170.0074
SER 1180.0106
VAL 1190.0110
GLU 1200.0137
ILE 1210.0148
LYS 1220.0138
GLU 1230.0138
ALA 1240.0099
ALA 1250.0098
ALA 1260.0067
LYS 1270.0066
ALA 1280.0070
TYR 1290.0074
LYS 1300.0077
ILE 1310.0117
ILE 1320.0124
SER 1330.0126
LEU 1340.0130
LYS 1350.0136
TYR 1360.0153
THR 1370.0139
ARG 1380.0145
LYS 1390.0136
VAL 1400.0143
CYS 1410.0156
ILE 1420.0174
GLY 1430.0179
PRO 1440.0190
GLY 1450.0214
PRO 1460.0217
GLY 1470.0207
LYS 1480.0188
ALA 1490.0150
TYR 1500.0139
LYS 1510.0115
ILE 1520.0104
ILE 1530.0109
SER 1540.0104
LEU 1550.0119
LYS 1560.0118
TYR 1570.0114
THR 1580.0114
ARG 1590.0111
LYS 1600.0112
VAL 1610.0108
CYS 1620.0116
GLY 1630.0105
PRO 1640.0095
GLY 1650.0130
PRO 1660.0169
GLY 1670.0149
GLY 1680.0101
LYS 1690.0081
ALA 1700.0058
TYR 1710.0076
LYS 1720.0072
ILE 1730.0088
ILE 1740.0089
SER 1750.0107
LEU 1760.0110
LYS 1770.0094
TYR 1780.0090
THR 1790.0080
ARG 1800.0082
LYS 1810.0073
VAL 1820.0087
GLY 1830.0092
PRO 1840.0112
GLY 1850.0116
PRO 1860.0122
GLY 1870.0115
ILE 1880.0115
ILE 1890.0124
SER 1900.0122
LEU 1910.0119
LYS 1920.0119
TYR 1930.0122
THR 1940.0123
ARG 1950.0127
LYS 1960.0116
VAL 1970.0103
CYS 1980.0096
ILE 1990.0087
GLN 2000.0077
LEU 2010.0066
GLY 2020.0056
GLY 2030.0049
PRO 2040.0045
GLY 2050.0048
PRO 2060.0044
GLY 2070.0041
ASN 2080.0044
ILE 2090.0043
LYS 2100.0035
THR 2110.0033
ALA 2120.0025
PHE 2130.0028
HIS 2140.0031
CYS 2150.0025
TYR 2160.0019
ALA 2170.0029
ALA 2180.0030
TYR 2190.0017
MET 2200.0018
THR 2210.0026
SER 2220.0023
ILE 2230.0011
LYS 2240.0012
ALA 2250.0008
CYS 2260.0039
ASP 2270.0044
LEU 2280.0048
LYS 2290.0053
LYS 2300.0051
PRO 2310.0046
LEU 2320.0027
MET 2330.0022
GLU 2340.0026
SER 2350.0049
GLY 2360.0034
TRP 2370.0032
SER 2380.0031
ASP 2390.0029
THR 2400.0030
ALA 2410.0039
HIS 2420.0035
GLY 2430.0045
LYS 2440.0034
LYS 2450.0048
SER 2460.0056
LEU 2470.0031
PRO 2480.0012
SER 2490.0027
SER 2500.0042
SER 2510.0022
SER 2520.0018
TYR 2530.0016
SER 2540.0015
TYR 2550.0014
ARG 2560.0014
ARG 2570.0011
LYS 2580.0008
LEU 2590.0012
THR 2600.0018
ASN 2610.0035
PRO 2620.0047
ALA 2630.0063
ASN 2640.0056
LYS 2650.0052
GLU 2660.0032
GLU 2670.0021
SER 2680.0009
ILE 2690.0011
LYS 2700.0019
LYS 2710.0020
GLN 2720.0016
LYS 2730.0013
TYR 2740.0007
SER 2750.0007
TYR 2760.0025
PRO 2770.0022
TRP 2780.0032
GLN 2790.0029
THR 2800.0020
SER 2810.0021
LYS 2820.0015
CYS 2830.0009
PHE 2840.0011
ASP 2880.0044
TYR 2890.0021
GLN 2900.0009
TYR 2910.0044
CYS 2970.0073
ASN 2980.0081
PRO 2990.0051
GLY 3000.0116
LYS 3010.0118
LYS 3020.0127
ASN 3030.0109
THR 3040.0061
ILE 3050.0088
SER 3060.0128
GLY 3070.0145
TYR 3080.0147
LYS 3090.0123
ARG 3100.0127
MET 3110.0151
MET 3120.0134
ALA 3130.0145
THR 3140.0132
LYS 3150.0117
ASP 3160.0110
SER 3170.0107
PHE 3180.0078
GLN 3190.0052
SER 3200.0027
PHE 3210.0006
ASN 3220.0011
LEU 3230.0021
THR 3240.0032
GLU 3250.0043
PRO 3260.0038
HIS 3270.0057
ILE 3280.0052
THR 3290.0062
THR 3300.0058
ASN 3310.0056
LYS 3320.0057
LEU 3330.0044
GLU 3340.0050
TRP 3350.0039
ILE 3360.0037
ASP 3370.0028
PRO 3380.0027
ASP 3390.0020
GLY 3400.0031
ASN 3410.0028
THR 3420.0037
ARG 3430.0018
GLY 3440.0037
GLY 3450.0068
GLY 3460.0098
GLY 10.0118
SER 20.0110
HIS 30.0093
SER 40.0081
MET 50.0077
ARG 60.0065
TYR 70.0064
PHE 80.0052
PHE 90.0060
THR 100.0058
SER 110.0068
VAL 120.0067
SER 130.0072
ARG 140.0083
PRO 150.0083
GLY 160.0096
ARG 170.0097
GLY 180.0098
GLU 190.0093
PRO 200.0087
ARG 210.0094
PHE 220.0084
ILE 230.0072
ALA 240.0069
VAL 250.0060
GLY 260.0070
TYR 270.0057
VAL 280.0066
ASP 290.0058
ASP 300.0034
THR 310.0039
GLN 320.0044
PHE 330.0065
VAL 340.0078
ARG 350.0079
PHE 360.0099
ASP 370.0102
SER 380.0118
ASP 390.0128
ALA 400.0134
ALA 410.0167
SER 420.0162
GLN 430.0157
ARG 440.0148
MET 450.0127
GLU 460.0109
PRO 470.0095
ARG 480.0069
ALA 490.0064
PRO 500.0076
TRP 510.0090
ILE 520.0104
GLU 530.0115
GLN 540.0131
GLU 550.0145
GLY 560.0180
PRO 570.0191
GLU 580.0202
TYR 590.0172
TRP 600.0162
ASP 610.0184
GLY 620.0176
GLU 630.0148
THR 640.0153
ARG 650.0167
LYS 660.0140
VAL 670.0119
LYS 680.0133
ALA 690.0131
HIS 700.0104
SER 710.0098
GLN 720.0102
THR 730.0087
HIS 740.0075
ARG 750.0083
VAL 760.0071
ASP 770.0058
LEU 780.0058
GLY 790.0061
THR 800.0050
LEU 810.0040
ARG 820.0043
GLY 830.0042
TYR 840.0040
TYR 850.0043
ASN 860.0065
GLN 870.0058
SER 880.0052
GLU 890.0055
ALA 900.0045
GLY 910.0061
SER 920.0059
HIS 930.0052
THR 940.0051
VAL 950.0051
GLN 960.0051
ARG 970.0054
MET 980.0054
TYR 990.0064
GLY 1000.0073
CYS 1010.0089
ASP 1020.0097
VAL 1030.0120
GLY 1040.0137
SER 1050.0150
ASP 1060.0170
TRP 1070.0146
ARG 1080.0152
PHE 1090.0134
LEU 1100.0121
ARG 1110.0088
GLY 1120.0078
TYR 1130.0063
HIS 1140.0058
GLN 1150.0048
TYR 1160.0047
ALA 1170.0044
TYR 1180.0045
ASP 1190.0046
GLY 1200.0043
LYS 1210.0039
ASP 1220.0040
TYR 1230.0039
ILE 1240.0041
ALA 1250.0045
LEU 1260.0052
LYS 1270.0055
GLU 1280.0067
ASP 1290.0074
LEU 1300.0070
ARG 1310.0072
SER 1320.0058
TRP 1330.0047
THR 1340.0041
ALA 1350.0040
ALA 1360.0044
ASP 1370.0040
MET 1380.0040
ALA 1390.0037
ALA 1400.0039
GLN 1410.0038
THR 1420.0041
THR 1430.0040
LYS 1440.0036
HIS 1450.0038
LYS 1460.0054
TRP 1470.0057
GLU 1480.0055
ALA 1490.0062
ALA 1500.0073
HIS 1510.0081
VAL 1520.0078
ALA 1530.0076
GLU 1540.0093
GLN 1550.0101
LEU 1560.0091
ARG 1570.0098
ALA 1580.0117
TYR 1590.0114
LEU 1600.0105
GLU 1610.0127
GLY 1620.0143
THR 1630.0138
CYS 1640.0118
VAL 1650.0131
GLU 1660.0153
TRP 1670.0136
LEU 1680.0117
ARG 1690.0134
ARG 1700.0137
TYR 1710.0111
LEU 1720.0106
GLU 1730.0123
ASN 1740.0114
GLY 1750.0086
LYS 1760.0081
GLU 1770.0050
THR 1780.0033
LEU 1790.0055
GLN 1800.0079
ARG 1810.0072
THR 1820.0075
ASP 1830.0079
ALA 1840.0089
PRO 1850.0082
LYS 1860.0090
THR 1870.0073
HIS 1880.0069
MET 1890.0051
THR 1900.0059
HIS 1910.0048
HIS 1920.0074
ALA 1930.0081
VAL 1940.0108
SER 1950.0121
ASP 1960.0116
HIS 1970.0110
GLU 1980.0097
ALA 1990.0070
THR 2000.0061
LEU 2010.0035
ARG 2020.0036
CYS 2030.0031
TRP 2040.0049
ALA 2050.0059
LEU 2060.0075
SER 2070.0081
PHE 2080.0070
TYR 2090.0062
PRO 2100.0053
ALA 2110.0041
GLU 2120.0036
ILE 2130.0037
THR 2140.0039
LEU 2150.0034
THR 2160.0042
TRP 2170.0045
GLN 2180.0060
ARG 2190.0069
ASP 2200.0081
GLY 2210.0074
GLU 2220.0079
ASP 2230.0075
GLN 2240.0072
THR 2250.0077
GLN 2260.0082
ASP 2270.0078
THR 2280.0058
GLU 2290.0047
LEU 2300.0029
VAL 2310.0034
GLU 2320.0028
THR 2330.0031
ARG 2340.0049
PRO 2350.0064
ALA 2360.0081
GLY 2370.0090
ASP 2380.0098
GLY 2390.0088
THR 2400.0076
PHE 2410.0061
GLN 2420.0055
LYS 2430.0036
TRP 2440.0030
ALA 2450.0023
ALA 2460.0042
VAL 2470.0055
VAL 2480.0071
VAL 2490.0072
PRO 2500.0086
SER 2510.0077
GLY 2520.0072
GLN 2530.0071
GLU 2540.0051
GLN 2550.0052
ARG 2560.0062
TYR 2570.0050
THR 2580.0048
CYS 2590.0041
HIS 2600.0053
VAL 2610.0053
GLN 2620.0060
HIS 2630.0061
GLU 2640.0072
GLY 2650.0083
LEU 2660.0097
PRO 2670.0122
LYS 2680.0116
PRO 2690.0092
LEU 2700.0081
THR 2710.0074
LEU 2720.0059
ARG 2730.0057
TRP 2740.0039
GLU 2750.0050
PRO 2760.0078
GLN 2780.0083
ARG 2790.0073
THR 2800.0078
PRO 2810.0073
LYS 2820.0068
ILE 2830.0095
GLN 2840.0095
VAL 2850.0118
TYR 2860.0122
SER 2870.0133
ARG 2880.0127
HIS 2890.0156
PRO 2900.0175
ALA 2910.0199
GLU 2920.0238
ASN 2930.0270
GLY 2940.0289
LYS 2950.0261
SER 2960.0234
ASN 2970.0191
PHE 2980.0151
LEU 2990.0144
ASN 3000.0113
CYS 3010.0103
TYR 3020.0074
VAL 3030.0060
SER 3040.0051
GLY 3050.0052
PHE 3060.0061
HIS 3070.0064
PRO 3080.0077
SER 3090.0059
ASP 3100.0076
ILE 3110.0082
GLU 3120.0095
VAL 3130.0111
ASP 3140.0135
LEU 3150.0148
LEU 3160.0185
LYS 3170.0214
ASN 3180.0249
GLY 3190.0237
GLU 3200.0229
ARG 3210.0195
ILE 3220.0181
GLU 3230.0174
LYS 3240.0142
VAL 3250.0120
GLU 3260.0081
HIS 3270.0052
SER 3280.0034
ASP 3290.0035
LEU 3300.0040
SER 3310.0032
PHE 3320.0030
SER 3330.0030
LYS 3340.0028
ASP 3350.0034
TRP 3360.0038
SER 3370.0039
PHE 3380.0046
TYR 3390.0043
LEU 3400.0049
LEU 3410.0059
TYR 3420.0074
TYR 3430.0106
THR 3440.0142
GLU 3450.0172
PHE 3460.0203
THR 3470.0236
PRO 3480.0240
THR 3490.0273
GLU 3500.0285
LYS 3510.0295
ASP 3520.0267
GLU 3530.0232
TYR 3540.0197
ALA 3550.0176
CYS 3560.0146
ARG 3570.0155
VAL 3580.0115
ASN 3590.0117
HIS 3600.0111
VAL 3610.0119
THR 3620.0125
LEU 3630.0143
SER 3640.0148
GLN 3650.0137
PRO 3660.0130
LYS 3670.0143
ILE 3680.0168
VAL 3690.0157
LYS 3700.0174
TRP 3710.0165
ASP 3720.0169
ARG 3730.0167
ASP 3740.0160
MET 3750.0121
SER 10.0036
GLN 20.0039
PHE 30.0038
ARG 40.0034
VAL 50.0036
SER 60.0035
PRO 70.0033
LEU 80.0030
ASP 90.0028
ARG 100.0027
THR 110.0027
TRP 120.0030
ASN 130.0029
LEU 140.0031
GLY 150.0037
GLU 160.0037
THR 170.0040
VAL 180.0038
GLU 190.0041
LEU 200.0040
LYS 210.0038
CYS 220.0038
GLN 230.0039
VAL 240.0041
LEU 250.0040
LEU 260.0045
SER 270.0028
ASN 280.0036
PRO 290.0055
THR 300.0063
SER 310.0067
GLY 320.0062
CYS 330.0056
SER 340.0054
TRP 350.0048
LEU 360.0047
PHE 370.0037
GLN 380.0035
PRO 390.0028
ARG 400.0030
GLY 410.0057
ALA 420.0084
ALA 430.0082
ALA 440.0052
SER 450.0046
PRO 460.0045
THR 470.0044
PHE 480.0048
LEU 490.0048
LEU 500.0053
TYR 510.0059
LEU 520.0053
SER 530.0050
GLN 540.0048
ASN 550.0054
LYS 560.0059
PRO 570.0056
LYS 580.0061
ALA 590.0060
ALA 600.0062
GLU 610.0061
GLY 620.0061
LEU 630.0058
ASP 640.0058
THR 650.0057
GLN 660.0058
ARG 670.0052
PHE 680.0050
SER 690.0052
GLY 700.0050
LYS 710.0045
ARG 720.0044
LEU 730.0041
GLY 740.0041
ASP 750.0040
THR 760.0041
PHE 770.0044
VAL 780.0043
LEU 790.0044
THR 800.0045
LEU 810.0045
SER 820.0046
ASP 830.0041
PHE 840.0035
ARG 850.0031
ARG 860.0024
GLU 870.0028
ASN 880.0031
GLU 890.0027
GLY 900.0029
TYR 910.0034
TYR 920.0038
PHE 930.0044
CYS 940.0050
SER 950.0055
ALA 960.0069
LEU 970.0074
SER 980.0069
ASN 990.0077
SER 1000.0087
ILE 1010.0087
MET 1020.0076
TYR 1030.0066
PHE 1040.0054
SER 1050.0046
HIS 1060.0040
PHE 1070.0036
VAL 1080.0035
PRO 1090.0029
VAL 1100.0029
PHE 1110.0026
LEU 1120.0022
PRO 1130.0021
ALA 1140.0016
SER 10.0066
GLN 20.0066
PHE 30.0053
ARG 40.0052
VAL 50.0052
SER 60.0063
PRO 70.0089
LEU 80.0103
ASP 90.0136
ARG 100.0149
THR 110.0174
TRP 120.0185
ASN 130.0221
LEU 140.0241
GLY 150.0237
GLU 160.0200
THR 170.0170
VAL 180.0141
GLU 190.0107
LEU 200.0080
LYS 210.0061
CYS 220.0053
GLN 230.0056
VAL 240.0066
LEU 250.0077
LEU 260.0084
SER 270.0108
ASN 280.0114
PRO 290.0100
THR 300.0113
SER 310.0101
GLY 320.0095
CYS 330.0080
SER 340.0080
TRP 350.0076
LEU 360.0078
PHE 370.0090
GLN 380.0086
PRO 390.0111
ARG 400.0116
GLY 410.0073
ALA 420.0046
ALA 430.0041
ALA 440.0060
SER 450.0059
PRO 460.0064
THR 470.0082
PHE 480.0086
LEU 490.0096
LEU 500.0098
TYR 510.0092
LEU 520.0094
SER 530.0102
GLN 540.0115
ASN 550.0119
LYS 560.0123
PRO 570.0112
LYS 580.0113
ALA 590.0111
ALA 600.0110
GLU 610.0131
GLY 620.0150
LEU 630.0148
ASP 640.0185
THR 650.0195
GLN 660.0217
ARG 670.0191
PHE 680.0159
SER 690.0145
GLY 700.0116
LYS 710.0108
ARG 720.0102
LEU 730.0097
GLY 740.0102
ASP 750.0087
THR 760.0068
PHE 770.0076
VAL 780.0083
LEU 790.0098
THR 800.0121
LEU 810.0157
SER 820.0183
ASP 830.0212
PHE 840.0200
ARG 850.0227
ARG 860.0232
GLU 870.0216
ASN 880.0179
GLU 890.0170
GLY 900.0134
TYR 910.0093
TYR 920.0083
PHE 930.0060
CYS 940.0057
SER 950.0062
ALA 960.0071
LEU 970.0072
SER 980.0077
ASN 990.0076
SER 1000.0071
ILE 1010.0064
MET 1020.0058
TYR 1030.0052
PHE 1040.0050
SER 1050.0049
HIS 1060.0049
PHE 1070.0068
VAL 1080.0084
PRO 1090.0113
VAL 1100.0132
PHE 1110.0172
LEU 1120.0214
PRO 1130.0234
ALA 1140.0257

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.