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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0568
MET 10.0014
SER 20.0010
THR 30.0010
ILE 40.0010
THR 50.0029
LYS 60.0035
ASP 70.0036
GLN 80.0020
ILE 90.0017
LEU 100.0027
GLU 110.0019
GLY 120.0011
VAL 130.0014
ALA 140.0016
ALA 150.0008
LEU 160.0011
SER 170.0010
VAL 180.0008
MET 190.0012
GLU 200.0013
ILE 210.0008
VAL 220.0012
GLU 230.0017
LEU 240.0010
ILE 250.0005
SER 260.0021
ALA 270.0018
MET 280.0004
GLU 290.0024
GLU 300.0027
LYS 310.0009
PHE 320.0022
GLY 330.0042
VAL 340.0055
SER 350.0061
ALA 360.0087
ALA 370.0088
ALA 380.0060
VAL 390.0058
ALA 400.0074
ALA 410.0039
GLY 420.0026
PRO 430.0033
ALA 440.0053
ALA 450.0054
ALA 460.0053
VAL 470.0060
GLU 480.0073
ALA 490.0072
ALA 500.0076
GLU 510.0061
GLU 520.0059
GLN 530.0031
THR 540.0049
GLU 550.0025
PHE 560.0019
ASP 570.0019
VAL 580.0030
VAL 590.0049
LEU 600.0061
ALA 610.0075
SER 620.0089
PHE 630.0087
GLY 640.0106
GLU 650.0119
ASN 660.0103
LYS 670.0091
VAL 680.0079
ALA 690.0074
VAL 700.0068
ILE 710.0058
LYS 720.0047
ALA 730.0045
VAL 740.0035
ARG 750.0027
GLY 760.0022
ALA 770.0023
THR 780.0020
GLY 790.0027
LEU 800.0040
GLY 810.0058
LEU 820.0064
LYS 830.0083
GLU 840.0071
ALA 850.0056
LYS 860.0076
ASP 870.0078
LEU 880.0063
VAL 890.0067
GLU 900.0081
SER 910.0070
ALA 920.0065
PRO 930.0059
ALA 940.0055
VAL 950.0046
LEU 960.0032
LYS 970.0015
GLU 980.0022
GLY 990.0026
VAL 1000.0030
ASN 1010.0056
LYS 1020.0065
ASP 1030.0087
GLU 1040.0065
ALA 1050.0051
GLU 1060.0079
THR 1070.0079
LEU 1080.0054
LYS 1090.0072
LYS 1100.0092
SER 1110.0074
LEU 1120.0070
GLU 1130.0096
GLU 1140.0102
ALA 1150.0088
GLY 1160.0103
ALA 1170.0090
SER 1180.0095
VAL 1190.0075
GLU 1200.0071
ILE 1210.0059
LYS 1220.0052
GLU 1230.0032
ALA 1240.0024
ALA 1250.0049
ALA 1260.0090
LYS 1270.0086
ALA 1280.0087
TYR 1290.0090
LYS 1300.0101
ILE 1310.0176
ILE 1320.0225
SER 1330.0260
LEU 1340.0304
LYS 1350.0349
TYR 1360.0389
THR 1370.0372
ARG 1380.0380
LYS 1390.0368
VAL 1400.0360
CYS 1410.0318
ILE 1420.0275
GLY 1430.0232
PRO 1440.0194
GLY 1450.0191
PRO 1460.0256
GLY 1470.0364
LYS 1480.0355
ALA 1490.0310
TYR 1500.0215
LYS 1510.0193
ILE 1520.0175
ILE 1530.0193
SER 1540.0202
LEU 1550.0249
LYS 1560.0239
TYR 1570.0243
THR 1580.0235
ARG 1590.0244
LYS 1600.0227
VAL 1610.0224
CYS 1620.0200
GLY 1630.0202
PRO 1640.0186
GLY 1650.0168
PRO 1660.0178
GLY 1670.0239
GLY 1680.0256
LYS 1690.0260
ALA 1700.0234
TYR 1710.0216
LYS 1720.0228
ILE 1730.0208
ILE 1740.0226
SER 1750.0216
LEU 1760.0247
LYS 1770.0194
TYR 1780.0195
THR 1790.0178
ARG 1800.0193
LYS 1810.0214
VAL 1820.0263
GLY 1830.0294
PRO 1840.0307
GLY 1850.0262
PRO 1860.0218
GLY 1870.0192
ILE 1880.0248
ILE 1890.0251
SER 1900.0303
LEU 1910.0311
LYS 1920.0301
TYR 1930.0294
THR 1940.0279
ARG 1950.0279
LYS 1960.0236
VAL 1970.0199
CYS 1980.0151
ILE 1990.0134
GLN 2000.0089
LEU 2010.0062
GLY 2020.0043
GLY 2030.0036
PRO 2040.0036
GLY 2050.0031
PRO 2060.0044
GLY 2070.0042
ASN 2080.0042
ILE 2090.0045
LYS 2100.0044
THR 2110.0061
ALA 2120.0066
PHE 2130.0067
HIS 2140.0063
CYS 2150.0064
TYR 2160.0093
ALA 2170.0095
ALA 2180.0087
TYR 2190.0093
MET 2200.0108
THR 2210.0117
SER 2220.0112
ILE 2230.0106
LYS 2240.0107
ALA 2250.0108
CYS 2260.0206
ASP 2270.0295
LEU 2280.0391
LYS 2290.0486
LYS 2300.0546
PRO 2310.0568
LEU 2320.0451
MET 2330.0325
GLU 2340.0223
SER 2350.0298
GLY 2360.0198
TRP 2370.0168
SER 2380.0152
ASP 2390.0139
THR 2400.0118
ALA 2410.0140
HIS 2420.0144
GLY 2430.0164
LYS 2440.0148
LYS 2450.0190
SER 2460.0180
LEU 2470.0067
PRO 2480.0126
SER 2490.0255
SER 2500.0300
SER 2510.0114
SER 2520.0084
TYR 2530.0062
SER 2540.0039
TYR 2550.0028
ARG 2560.0038
ARG 2570.0036
LYS 2580.0033
LEU 2590.0053
THR 2600.0063
ASN 2610.0144
PRO 2620.0170
ALA 2630.0232
ASN 2640.0199
LYS 2650.0210
GLU 2660.0149
GLU 2670.0132
SER 2680.0093
ILE 2690.0063
LYS 2700.0047
LYS 2710.0029
GLN 2720.0025
LYS 2730.0033
TYR 2740.0031
SER 2750.0037
TYR 2760.0038
PRO 2770.0049
TRP 2780.0056
GLN 2790.0037
THR 2800.0056
SER 2810.0073
LYS 2820.0065
CYS 2830.0061
PHE 2840.0071
ASP 2880.0034
TYR 2890.0017
GLN 2900.0029
TYR 2910.0037
CYS 2970.0096
ASN 2980.0127
PRO 2990.0055
GLY 3000.0193
LYS 3010.0145
LYS 3020.0148
ASN 3030.0125
THR 3040.0081
ILE 3050.0153
SER 3060.0265
GLY 3070.0266
TYR 3080.0293
LYS 3090.0245
ARG 3100.0226
MET 3110.0278
MET 3120.0254
ALA 3130.0263
THR 3140.0249
LYS 3150.0235
ASP 3160.0226
SER 3170.0228
PHE 3180.0182
GLN 3190.0143
SER 3200.0126
PHE 3210.0118
ASN 3220.0142
LEU 3230.0157
THR 3240.0189
GLU 3250.0212
PRO 3260.0193
HIS 3270.0221
ILE 3280.0224
THR 3290.0240
THR 3300.0248
ASN 3310.0220
LYS 3320.0208
LEU 3330.0183
GLU 3340.0181
TRP 3350.0171
ILE 3360.0168
ASP 3370.0137
PRO 3380.0173
ASP 3390.0159
GLY 3400.0125
ASN 3410.0120
THR 3420.0038
ARG 3430.0164
GLY 3440.0223
GLY 3450.0340
GLY 3460.0430
GLY 10.0100
SER 20.0089
HIS 30.0077
SER 40.0062
MET 50.0054
ARG 60.0037
TYR 70.0031
PHE 80.0021
PHE 90.0018
THR 100.0016
SER 110.0014
VAL 120.0012
SER 130.0012
ARG 140.0012
PRO 150.0013
GLY 160.0024
ARG 170.0019
GLY 180.0019
GLU 190.0022
PRO 200.0020
ARG 210.0029
PHE 220.0026
ILE 230.0025
ALA 240.0027
VAL 250.0027
GLY 260.0048
TYR 270.0048
VAL 280.0058
ASP 290.0054
ASP 300.0040
THR 310.0045
GLN 320.0044
PHE 330.0057
VAL 340.0057
ARG 350.0051
PHE 360.0046
ASP 370.0043
SER 380.0048
ASP 390.0053
ALA 400.0059
ALA 410.0083
SER 420.0084
GLN 430.0077
ARG 440.0077
MET 450.0070
GLU 460.0073
PRO 470.0072
ARG 480.0060
ALA 490.0065
PRO 500.0078
TRP 510.0087
ILE 520.0087
GLU 530.0094
GLN 540.0107
GLU 550.0107
GLY 560.0121
PRO 570.0119
GLU 580.0120
TYR 590.0106
TRP 600.0097
ASP 610.0099
GLY 620.0093
GLU 630.0079
THR 640.0077
ARG 650.0077
LYS 660.0058
VAL 670.0047
LYS 680.0047
ALA 690.0042
HIS 700.0030
SER 710.0023
GLN 720.0021
THR 730.0018
HIS 740.0012
ARG 750.0012
VAL 760.0019
ASP 770.0022
LEU 780.0019
GLY 790.0024
THR 800.0030
LEU 810.0035
ARG 820.0042
GLY 830.0048
TYR 840.0039
TYR 850.0039
ASN 860.0087
GLN 870.0069
SER 880.0067
GLU 890.0061
ALA 900.0042
GLY 910.0007
SER 920.0007
HIS 930.0009
THR 940.0011
VAL 950.0011
GLN 960.0011
ARG 970.0010
MET 980.0016
TYR 990.0024
GLY 1000.0033
CYS 1010.0048
ASP 1020.0063
VAL 1030.0082
GLY 1040.0098
SER 1050.0113
ASP 1060.0123
TRP 1070.0104
ARG 1080.0098
PHE 1090.0079
LEU 1100.0077
ARG 1110.0049
GLY 1120.0037
TYR 1130.0026
HIS 1140.0014
GLN 1150.0013
TYR 1160.0015
ALA 1170.0017
TYR 1180.0017
ASP 1190.0018
GLY 1200.0021
LYS 1210.0023
ASP 1220.0020
TYR 1230.0021
ILE 1240.0020
ALA 1250.0018
LEU 1260.0019
LYS 1270.0028
GLU 1280.0031
ASP 1290.0036
LEU 1300.0026
ARG 1310.0032
SER 1320.0031
TRP 1330.0027
THR 1340.0026
ALA 1350.0031
ALA 1360.0023
ASP 1370.0023
MET 1380.0023
ALA 1390.0023
ALA 1400.0023
GLN 1410.0025
THR 1420.0028
THR 1430.0027
LYS 1440.0027
HIS 1450.0031
LYS 1460.0032
TRP 1470.0028
GLU 1480.0032
ALA 1490.0038
ALA 1500.0035
HIS 1510.0031
VAL 1520.0021
ALA 1530.0019
GLU 1540.0019
GLN 1550.0010
LEU 1560.0007
ARG 1570.0021
ALA 1580.0024
TYR 1590.0034
LEU 1600.0038
GLU 1610.0057
GLY 1620.0065
THR 1630.0065
CYS 1640.0062
VAL 1650.0077
GLU 1660.0096
TRP 1670.0089
LEU 1680.0083
ARG 1690.0099
ARG 1700.0102
TYR 1710.0091
LEU 1720.0094
GLU 1730.0109
ASN 1740.0106
GLY 1750.0092
LYS 1760.0098
GLU 1770.0088
THR 1780.0071
LEU 1790.0072
GLN 1800.0085
ARG 1810.0063
THR 1820.0060
ASP 1830.0049
ALA 1840.0054
PRO 1850.0050
LYS 1860.0054
THR 1870.0056
HIS 1880.0057
MET 1890.0057
THR 1900.0055
HIS 1910.0066
HIS 1920.0063
ALA 1930.0072
VAL 1940.0065
SER 1950.0080
ASP 1960.0101
HIS 1970.0088
GLU 1980.0069
ALA 1990.0066
THR 2000.0050
LEU 2010.0055
ARG 2020.0046
CYS 2030.0048
TRP 2040.0044
ALA 2050.0045
LEU 2060.0035
SER 2070.0032
PHE 2080.0040
TYR 2090.0045
PRO 2100.0050
ALA 2110.0040
GLU 2120.0047
ILE 2130.0048
THR 2140.0052
LEU 2150.0050
THR 2160.0046
TRP 2170.0048
GLN 2180.0054
ARG 2190.0058
ASP 2200.0067
GLY 2210.0058
GLU 2220.0041
ASP 2230.0032
GLN 2240.0021
THR 2250.0017
GLN 2260.0012
ASP 2270.0012
THR 2280.0019
GLU 2290.0020
LEU 2300.0028
VAL 2310.0028
GLU 2320.0025
THR 2330.0027
ARG 2340.0024
PRO 2350.0026
ALA 2360.0024
GLY 2370.0027
ASP 2380.0031
GLY 2390.0035
THR 2400.0032
PHE 2410.0031
GLN 2420.0029
LYS 2430.0031
TRP 2440.0034
ALA 2450.0039
ALA 2460.0035
VAL 2470.0038
VAL 2480.0045
VAL 2490.0057
PRO 2500.0068
SER 2510.0085
GLY 2520.0093
GLN 2530.0083
GLU 2540.0079
GLN 2550.0089
ARG 2560.0079
TYR 2570.0069
THR 2580.0071
CYS 2590.0064
HIS 2600.0066
VAL 2610.0065
GLN 2620.0068
HIS 2630.0063
GLU 2640.0067
GLY 2650.0061
LEU 2660.0075
PRO 2670.0088
LYS 2680.0092
PRO 2690.0086
LEU 2700.0081
THR 2710.0086
LEU 2720.0082
ARG 2730.0088
TRP 2740.0084
GLU 2750.0099
PRO 2760.0113
GLN 2780.0027
ARG 2790.0024
THR 2800.0026
PRO 2810.0024
LYS 2820.0025
ILE 2830.0027
GLN 2840.0027
VAL 2850.0027
TYR 2860.0026
SER 2870.0025
ARG 2880.0023
HIS 2890.0023
PRO 2900.0025
ALA 2910.0028
GLU 2920.0030
ASN 2930.0036
GLY 2940.0037
LYS 2950.0031
SER 2960.0031
ASN 2970.0027
PHE 2980.0027
LEU 2990.0028
ASN 3000.0025
CYS 3010.0026
TYR 3020.0023
VAL 3030.0022
SER 3040.0020
GLY 3050.0021
PHE 3060.0022
HIS 3070.0023
PRO 3080.0017
SER 3090.0017
ASP 3100.0017
ILE 3110.0017
GLU 3120.0017
VAL 3130.0022
ASP 3140.0028
LEU 3150.0031
LEU 3160.0038
LYS 3170.0043
ASN 3180.0050
GLY 3190.0049
GLU 3200.0048
ARG 3210.0043
ILE 3220.0040
GLU 3230.0043
LYS 3240.0040
VAL 3250.0035
GLU 3260.0033
HIS 3270.0029
SER 3280.0028
ASP 3290.0027
LEU 3300.0022
SER 3310.0014
PHE 3320.0012
SER 3330.0027
LYS 3340.0027
ASP 3350.0027
TRP 3360.0023
SER 3370.0025
PHE 3380.0019
TYR 3390.0018
LEU 3400.0020
LEU 3410.0021
TYR 3420.0026
TYR 3430.0028
THR 3440.0032
GLU 3450.0033
PHE 3460.0034
THR 3470.0035
PRO 3480.0036
THR 3490.0044
GLU 3500.0050
LYS 3510.0057
ASP 3520.0050
GLU 3530.0046
TYR 3540.0039
ALA 3550.0035
CYS 3560.0029
ARG 3570.0028
VAL 3580.0021
ASN 3590.0019
HIS 3600.0019
VAL 3610.0021
THR 3620.0027
LEU 3630.0042
SER 3640.0052
GLN 3650.0036
PRO 3660.0020
LYS 3670.0027
ILE 3680.0034
VAL 3690.0034
LYS 3700.0038
TRP 3710.0035
ASP 3720.0040
ARG 3730.0031
ASP 3740.0037
MET 3750.0039
SER 10.0048
GLN 20.0044
PHE 30.0048
ARG 40.0055
VAL 50.0058
SER 60.0088
PRO 70.0103
LEU 80.0099
ASP 90.0122
ARG 100.0128
THR 110.0137
TRP 120.0147
ASN 130.0160
LEU 140.0164
GLY 150.0179
GLU 160.0168
THR 170.0150
VAL 180.0130
GLU 190.0115
LEU 200.0096
LYS 210.0072
CYS 220.0059
GLN 230.0055
VAL 240.0042
LEU 250.0045
LEU 260.0033
SER 270.0034
ASN 280.0029
PRO 290.0027
THR 300.0022
SER 310.0024
GLY 320.0037
CYS 330.0047
SER 340.0053
TRP 350.0066
LEU 360.0072
PHE 370.0078
GLN 380.0074
PRO 390.0083
ARG 400.0083
GLY 410.0093
ALA 420.0085
ALA 430.0074
ALA 440.0079
SER 450.0071
PRO 460.0068
THR 470.0075
PHE 480.0072
LEU 490.0081
LEU 500.0076
TYR 510.0058
LEU 520.0057
SER 530.0045
GLN 540.0042
ASN 550.0042
LYS 560.0062
PRO 570.0070
LYS 580.0072
ALA 590.0087
ALA 600.0091
GLU 610.0114
GLY 620.0129
LEU 630.0125
ASP 640.0137
THR 650.0127
GLN 660.0149
ARG 670.0144
PHE 680.0120
SER 690.0107
GLY 700.0089
LYS 710.0071
ARG 720.0060
LEU 730.0066
GLY 740.0056
ASP 750.0052
THR 760.0068
PHE 770.0067
VAL 780.0085
LEU 790.0092
THR 800.0111
LEU 810.0134
SER 820.0155
ASP 830.0165
PHE 840.0149
ARG 850.0148
ARG 860.0127
GLU 870.0122
ASN 880.0122
GLU 890.0111
GLY 900.0098
TYR 910.0082
TYR 920.0080
PHE 930.0067
CYS 940.0059
SER 950.0046
ALA 960.0033
LEU 970.0025
SER 980.0023
ASN 990.0016
SER 1000.0010
ILE 1010.0021
MET 1020.0027
TYR 1030.0035
PHE 1040.0043
SER 1050.0053
HIS 1060.0062
PHE 1070.0068
VAL 1080.0083
PRO 1090.0091
VAL 1100.0103
PHE 1110.0119
LEU 1120.0133
PRO 1130.0141
ALA 1140.0131
SER 10.0094
GLN 20.0085
PHE 30.0079
ARG 40.0086
VAL 50.0077
SER 60.0078
PRO 70.0079
LEU 80.0092
ASP 90.0100
ARG 100.0087
THR 110.0078
TRP 120.0061
ASN 130.0057
LEU 140.0047
GLY 150.0030
GLU 160.0035
THR 170.0031
VAL 180.0039
GLU 190.0045
LEU 200.0051
LYS 210.0060
CYS 220.0064
GLN 230.0074
VAL 240.0069
LEU 250.0084
LEU 260.0078
SER 270.0083
ASN 280.0067
PRO 290.0062
THR 300.0050
SER 310.0033
GLY 320.0030
CYS 330.0032
SER 340.0027
TRP 350.0030
LEU 360.0037
PHE 370.0046
GLN 380.0059
PRO 390.0068
ARG 400.0079
GLY 410.0073
ALA 420.0067
ALA 430.0061
ALA 440.0063
SER 450.0057
PRO 460.0053
THR 470.0043
PHE 480.0031
LEU 490.0022
LEU 500.0013
TYR 510.0015
LEU 520.0023
SER 530.0020
GLN 540.0028
ASN 550.0029
LYS 560.0030
PRO 570.0018
LYS 580.0010
ALA 590.0008
ALA 600.0020
GLU 610.0033
GLY 620.0043
LEU 630.0031
ASP 640.0034
THR 650.0031
GLN 660.0036
ARG 670.0021
PHE 680.0017
SER 690.0023
GLY 700.0030
LYS 710.0044
ARG 720.0053
LEU 730.0071
GLY 740.0077
ASP 750.0073
THR 760.0068
PHE 770.0051
VAL 780.0047
LEU 790.0032
THR 800.0028
LEU 810.0019
SER 820.0017
ASP 830.0022
PHE 840.0035
ARG 850.0049
ARG 860.0068
GLU 870.0067
ASN 880.0052
GLU 890.0065
GLY 900.0067
TYR 910.0062
TYR 920.0051
PHE 930.0052
CYS 940.0047
SER 950.0045
ALA 960.0047
LEU 970.0045
SER 980.0052
ASN 990.0049
SER 1000.0048
ILE 1010.0060
MET 1020.0056
TYR 1030.0063
PHE 1040.0064
SER 1050.0068
HIS 1060.0074
PHE 1070.0071
VAL 1080.0067
PRO 1090.0074
VAL 1100.0064
PHE 1110.0072
LEU 1120.0077
PRO 1130.0092
ALA 1140.0109

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.