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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1178
MET 10.0008
SER 20.0006
THR 30.0004
ILE 40.0005
THR 50.0012
LYS 60.0016
ASP 70.0016
GLN 80.0009
ILE 90.0009
LEU 100.0013
GLU 110.0008
GLY 120.0006
VAL 130.0007
ALA 140.0007
ALA 150.0004
LEU 160.0006
SER 170.0005
VAL 180.0004
MET 190.0007
GLU 200.0007
ILE 210.0004
VAL 220.0007
GLU 230.0009
LEU 240.0006
ILE 250.0004
SER 260.0010
ALA 270.0008
MET 280.0003
GLU 290.0012
GLU 300.0014
LYS 310.0007
PHE 320.0012
GLY 330.0021
VAL 340.0024
SER 350.0025
ALA 360.0034
ALA 370.0031
ALA 380.0020
VAL 390.0019
ALA 400.0021
ALA 410.0008
GLY 420.0020
PRO 430.0024
ALA 440.0035
ALA 450.0028
ALA 460.0026
VAL 470.0036
GLU 480.0052
ALA 490.0050
ALA 500.0050
GLU 510.0045
GLU 520.0041
GLN 530.0033
THR 540.0033
GLU 550.0024
PHE 560.0020
ASP 570.0017
VAL 580.0014
VAL 590.0013
LEU 600.0012
ALA 610.0019
SER 620.0018
PHE 630.0017
GLY 640.0021
GLU 650.0023
ASN 660.0022
LYS 670.0018
VAL 680.0019
ALA 690.0019
VAL 700.0016
ILE 710.0013
LYS 720.0015
ALA 730.0013
VAL 740.0010
ARG 750.0010
GLY 760.0010
ALA 770.0009
THR 780.0008
GLY 790.0010
LEU 800.0011
GLY 810.0015
LEU 820.0015
LYS 830.0014
GLU 840.0011
ALA 850.0009
LYS 860.0009
ASP 870.0008
LEU 880.0009
VAL 890.0010
GLU 900.0010
SER 910.0011
ALA 920.0013
PRO 930.0016
ALA 940.0013
VAL 950.0013
LEU 960.0008
LYS 970.0011
GLU 980.0016
GLY 990.0020
VAL 1000.0018
ASN 1010.0023
LYS 1020.0026
ASP 1030.0026
GLU 1040.0020
ALA 1050.0020
GLU 1060.0023
THR 1070.0020
LEU 1080.0016
LYS 1090.0020
LYS 1100.0022
SER 1110.0018
LEU 1120.0017
GLU 1130.0022
GLU 1140.0023
ALA 1150.0021
GLY 1160.0020
ALA 1170.0018
SER 1180.0019
VAL 1190.0018
GLU 1200.0019
ILE 1210.0015
LYS 1220.0013
GLU 1230.0018
ALA 1240.0016
ALA 1250.0016
ALA 1260.0032
LYS 1270.0038
ALA 1280.0038
TYR 1290.0045
LYS 1300.0046
ILE 1310.0058
ILE 1320.0061
SER 1330.0061
LEU 1340.0062
LYS 1350.0072
TYR 1360.0093
THR 1370.0096
ARG 1380.0099
LYS 1390.0105
VAL 1400.0107
CYS 1410.0106
ILE 1420.0145
GLY 1430.0169
PRO 1440.0204
GLY 1450.0255
PRO 1460.0298
GLY 1470.0300
LYS 1480.0254
ALA 1490.0190
TYR 1500.0147
LYS 1510.0117
ILE 1520.0103
ILE 1530.0101
SER 1540.0091
LEU 1550.0100
LYS 1560.0091
TYR 1570.0081
THR 1580.0080
ARG 1590.0072
LYS 1600.0071
VAL 1610.0064
CYS 1620.0068
GLY 1630.0067
PRO 1640.0061
GLY 1650.0065
PRO 1660.0066
GLY 1670.0057
GLY 1680.0054
LYS 1690.0047
ALA 1700.0050
TYR 1710.0053
LYS 1720.0055
ILE 1730.0066
ILE 1740.0070
SER 1750.0084
LEU 1760.0096
LYS 1770.0090
TYR 1780.0089
THR 1790.0089
ARG 1800.0092
LYS 1810.0098
VAL 1820.0109
GLY 1830.0128
PRO 1840.0155
GLY 1850.0158
PRO 1860.0131
GLY 1870.0114
ILE 1880.0099
ILE 1890.0104
SER 1900.0097
LEU 1910.0087
LYS 1920.0087
TYR 1930.0078
THR 1940.0077
ARG 1950.0070
LYS 1960.0050
VAL 1970.0045
CYS 1980.0051
ILE 1990.0054
GLN 2000.0059
LEU 2010.0036
GLY 2020.0037
GLY 2030.0035
PRO 2040.0030
GLY 2050.0030
PRO 2060.0024
GLY 2070.0027
ASN 2080.0030
ILE 2090.0029
LYS 2100.0029
THR 2110.0034
ALA 2120.0033
PHE 2130.0029
HIS 2140.0028
CYS 2150.0029
TYR 2160.0032
ALA 2170.0029
ALA 2180.0028
TYR 2190.0028
MET 2200.0030
THR 2210.0047
SER 2220.0043
ILE 2230.0078
LYS 2240.0085
ALA 2250.0117
CYS 2260.0171
ASP 2270.0149
LEU 2280.0236
LYS 2290.0251
LYS 2300.0346
PRO 2310.0477
LEU 2320.0487
MET 2330.0356
GLU 2340.0378
SER 2350.0336
GLY 2360.0234
TRP 2370.0178
SER 2380.0156
ASP 2390.0151
THR 2400.0156
ALA 2410.0171
HIS 2420.0160
GLY 2430.0136
LYS 2440.0131
LYS 2450.0115
SER 2460.0065
LEU 2470.0069
PRO 2480.0301
SER 2490.0449
SER 2500.0400
SER 2510.0106
SER 2520.0044
TYR 2530.0034
SER 2540.0066
TYR 2550.0121
ARG 2560.0123
ARG 2570.0094
LYS 2580.0073
LEU 2590.0081
THR 2600.0084
ASN 2610.0144
PRO 2620.0172
ALA 2630.0178
ASN 2640.0093
LYS 2650.0151
GLU 2660.0115
GLU 2670.0143
SER 2680.0120
ILE 2690.0087
LYS 2700.0124
LYS 2710.0093
GLN 2720.0062
LYS 2730.0046
TYR 2740.0024
SER 2750.0030
TYR 2760.0034
PRO 2770.0023
TRP 2780.0028
GLN 2790.0021
THR 2800.0007
SER 2810.0018
LYS 2820.0016
CYS 2830.0015
PHE 2840.0031
ASP 2880.0023
TYR 2890.0010
GLN 2900.0011
TYR 2910.0009
CYS 2970.0413
ASN 2980.0333
PRO 2990.0239
GLY 3000.0423
LYS 3010.0585
LYS 3020.0506
ASN 3030.0480
THR 3040.0437
ILE 3050.0463
SER 3060.0461
GLY 3070.0499
TYR 3080.0468
LYS 3090.0438
ARG 3100.0430
MET 3110.0458
MET 3120.0405
ALA 3130.0482
THR 3140.0436
LYS 3150.0361
ASP 3160.0403
SER 3170.0437
PHE 3180.0325
GLN 3190.0305
SER 3200.0171
PHE 3210.0158
ASN 3220.0107
LEU 3230.0125
THR 3240.0102
GLU 3250.0160
PRO 3260.0206
HIS 3270.0334
ILE 3280.0390
THR 3290.0503
THR 3300.0571
ASN 3310.0575
LYS 3320.0483
LEU 3330.0366
GLU 3340.0327
TRP 3350.0215
ILE 3360.0159
ASP 3370.0119
PRO 3380.0132
ASP 3390.0137
GLY 3400.0096
ASN 3410.0103
THR 3420.0227
ARG 3430.0431
GLY 3440.0670
GLY 3450.0908
GLY 3460.1178
GLY 10.0046
SER 20.0036
HIS 30.0028
SER 40.0018
MET 50.0012
ARG 60.0007
TYR 70.0012
PHE 80.0012
PHE 90.0020
THR 100.0022
SER 110.0028
VAL 120.0026
SER 130.0032
ARG 140.0032
PRO 150.0037
GLY 160.0043
ARG 170.0042
GLY 180.0048
GLU 190.0048
PRO 200.0040
ARG 210.0037
PHE 220.0033
ILE 230.0027
ALA 240.0024
VAL 250.0020
GLY 260.0019
TYR 270.0018
VAL 280.0021
ASP 290.0022
ASP 300.0022
THR 310.0029
GLN 320.0027
PHE 330.0032
VAL 340.0033
ARG 350.0034
PHE 360.0038
ASP 370.0040
SER 380.0046
ASP 390.0048
ALA 400.0052
ALA 410.0069
SER 420.0067
GLN 430.0063
ARG 440.0057
MET 450.0047
GLU 460.0049
PRO 470.0047
ARG 480.0044
ALA 490.0046
PRO 500.0055
TRP 510.0053
ILE 520.0048
GLU 530.0058
GLN 540.0061
GLU 550.0054
GLY 560.0059
PRO 570.0064
GLU 580.0058
TYR 590.0049
TRP 600.0054
ASP 610.0059
GLY 620.0049
GLU 630.0043
THR 640.0052
ARG 650.0054
LYS 660.0042
VAL 670.0039
LYS 680.0049
ALA 690.0049
HIS 700.0039
SER 710.0038
GLN 720.0045
THR 730.0043
HIS 740.0037
ARG 750.0043
VAL 760.0043
ASP 770.0039
LEU 780.0037
GLY 790.0043
THR 800.0044
LEU 810.0034
ARG 820.0034
GLY 830.0041
TYR 840.0041
TYR 850.0038
ASN 860.0031
GLN 870.0026
SER 880.0025
GLU 890.0023
ALA 900.0019
GLY 910.0028
SER 920.0026
HIS 930.0026
THR 940.0024
VAL 950.0026
GLN 960.0022
ARG 970.0021
MET 980.0014
TYR 990.0013
GLY 1000.0008
CYS 1010.0010
ASP 1020.0019
VAL 1030.0026
GLY 1040.0037
SER 1050.0045
ASP 1060.0043
TRP 1070.0033
ARG 1080.0027
PHE 1090.0021
LEU 1100.0029
ARG 1110.0024
GLY 1120.0020
TYR 1130.0021
HIS 1140.0022
GLN 1150.0024
TYR 1160.0025
ALA 1170.0025
TYR 1180.0027
ASP 1190.0025
GLY 1200.0022
LYS 1210.0025
ASP 1220.0027
TYR 1230.0030
ILE 1240.0032
ALA 1250.0029
LEU 1260.0032
LYS 1270.0037
GLU 1280.0035
ASP 1290.0041
LEU 1300.0036
ARG 1310.0045
SER 1320.0046
TRP 1330.0041
THR 1340.0039
ALA 1350.0040
ALA 1360.0034
ASP 1370.0034
MET 1380.0037
ALA 1390.0035
ALA 1400.0035
GLN 1410.0046
THR 1420.0049
THR 1430.0043
LYS 1440.0046
HIS 1450.0054
LYS 1460.0055
TRP 1470.0050
GLU 1480.0057
ALA 1490.0064
ALA 1500.0059
HIS 1510.0057
VAL 1520.0046
ALA 1530.0042
GLU 1540.0045
GLN 1550.0041
LEU 1560.0031
ARG 1570.0029
ALA 1580.0026
TYR 1590.0019
LEU 1600.0014
GLU 1610.0014
GLY 1620.0008
THR 1630.0013
CYS 1640.0008
VAL 1650.0010
GLU 1660.0016
TRP 1670.0021
LEU 1680.0021
ARG 1690.0028
ARG 1700.0033
TYR 1710.0034
LEU 1720.0037
GLU 1730.0044
ASN 1740.0048
GLY 1750.0048
LYS 1760.0051
GLU 1770.0055
THR 1780.0046
LEU 1790.0039
GLN 1800.0046
ARG 1810.0038
THR 1820.0034
ASP 1830.0030
ALA 1840.0030
PRO 1850.0024
LYS 1860.0020
THR 1870.0020
HIS 1880.0019
MET 1890.0019
THR 1900.0017
HIS 1910.0022
HIS 1920.0022
ALA 1930.0026
VAL 1940.0026
SER 1950.0032
ASP 1960.0037
HIS 1970.0035
GLU 1980.0030
ALA 1990.0028
THR 2000.0023
LEU 2010.0022
ARG 2020.0018
CYS 2030.0018
TRP 2040.0014
ALA 2050.0015
LEU 2060.0014
SER 2070.0018
PHE 2080.0021
TYR 2090.0023
PRO 2100.0024
ALA 2110.0014
GLU 2120.0017
ILE 2130.0018
THR 2140.0021
LEU 2150.0020
THR 2160.0020
TRP 2170.0022
GLN 2180.0025
ARG 2190.0028
ASP 2200.0030
GLY 2210.0027
GLU 2220.0022
ASP 2230.0017
GLN 2240.0018
THR 2250.0016
GLN 2260.0015
ASP 2270.0016
THR 2280.0016
GLU 2290.0016
LEU 2300.0016
VAL 2310.0011
GLU 2320.0008
THR 2330.0006
ARG 2340.0006
PRO 2350.0010
ALA 2360.0014
GLY 2370.0019
ASP 2380.0023
GLY 2390.0022
THR 2400.0019
PHE 2410.0012
GLN 2420.0009
LYS 2430.0010
TRP 2440.0012
ALA 2450.0017
ALA 2460.0018
VAL 2470.0021
VAL 2480.0024
VAL 2490.0027
PRO 2500.0031
SER 2510.0034
GLY 2520.0037
GLN 2530.0036
GLU 2540.0032
GLN 2550.0034
ARG 2560.0034
TYR 2570.0030
THR 2580.0028
CYS 2590.0024
HIS 2600.0024
VAL 2610.0024
GLN 2620.0027
HIS 2630.0026
GLU 2640.0030
GLY 2650.0029
LEU 2660.0032
PRO 2670.0038
LYS 2680.0038
PRO 2690.0035
LEU 2700.0030
THR 2710.0031
LEU 2720.0029
ARG 2730.0032
TRP 2740.0030
GLU 2750.0035
PRO 2760.0039
GLN 2780.0025
ARG 2790.0020
THR 2800.0016
PRO 2810.0011
LYS 2820.0007
ILE 2830.0013
GLN 2840.0009
VAL 2850.0011
TYR 2860.0010
SER 2870.0013
ARG 2880.0017
HIS 2890.0018
PRO 2900.0017
ALA 2910.0018
GLU 2920.0023
ASN 2930.0026
GLY 2940.0033
LYS 2950.0032
SER 2960.0032
ASN 2970.0026
PHE 2980.0022
LEU 2990.0019
ASN 3000.0015
CYS 3010.0014
TYR 3020.0010
VAL 3030.0007
SER 3040.0008
GLY 3050.0012
PHE 3060.0015
HIS 3070.0018
PRO 3080.0021
SER 3090.0017
ASP 3100.0021
ILE 3110.0019
GLU 3120.0021
VAL 3130.0021
ASP 3140.0025
LEU 3150.0024
LEU 3160.0028
LYS 3170.0030
ASN 3180.0033
GLY 3190.0034
GLU 3200.0037
ARG 3210.0035
ILE 3220.0034
GLU 3230.0039
LYS 3240.0036
VAL 3250.0030
GLU 3260.0026
HIS 3270.0020
SER 3280.0022
ASP 3290.0021
LEU 3300.0017
SER 3310.0010
PHE 3320.0009
SER 3330.0014
LYS 3340.0017
ASP 3350.0020
TRP 3360.0019
SER 3370.0017
PHE 3380.0013
TYR 3390.0009
LEU 3400.0010
LEU 3410.0011
TYR 3420.0016
TYR 3430.0021
THR 3440.0026
GLU 3450.0029
PHE 3460.0029
THR 3470.0030
PRO 3480.0026
THR 3490.0028
GLU 3500.0026
LYS 3510.0029
ASP 3520.0029
GLU 3530.0025
TYR 3540.0023
ALA 3550.0022
CYS 3560.0021
ARG 3570.0024
VAL 3580.0019
ASN 3590.0021
HIS 3600.0022
VAL 3610.0024
THR 3620.0023
LEU 3630.0020
SER 3640.0020
GLN 3650.0020
PRO 3660.0020
LYS 3670.0021
ILE 3680.0024
VAL 3690.0019
LYS 3700.0019
TRP 3710.0016
ASP 3720.0014
ARG 3730.0011
ASP 3740.0009
MET 3750.0010
SER 10.0026
GLN 20.0026
PHE 30.0027
ARG 40.0029
VAL 50.0029
SER 60.0036
PRO 70.0037
LEU 80.0035
ASP 90.0039
ARG 100.0039
THR 110.0051
TRP 120.0039
ASN 130.0038
LEU 140.0025
GLY 150.0012
GLU 160.0024
THR 170.0027
VAL 180.0027
GLU 190.0036
LEU 200.0036
LYS 210.0036
CYS 220.0032
GLN 230.0031
VAL 240.0027
LEU 250.0026
LEU 260.0020
SER 270.0019
ASN 280.0019
PRO 290.0019
THR 300.0019
SER 310.0025
GLY 320.0028
CYS 330.0028
SER 340.0026
TRP 350.0027
LEU 360.0027
PHE 370.0025
GLN 380.0024
PRO 390.0022
ARG 400.0019
GLY 410.0055
ALA 420.0046
ALA 430.0032
ALA 440.0034
SER 450.0024
PRO 460.0022
THR 470.0023
PHE 480.0026
LEU 490.0027
LEU 500.0030
TYR 510.0031
LEU 520.0034
SER 530.0034
GLN 540.0037
ASN 550.0038
LYS 560.0043
PRO 570.0039
LYS 580.0036
ALA 590.0033
ALA 600.0030
GLU 610.0034
GLY 620.0037
LEU 630.0033
ASP 640.0038
THR 650.0043
GLN 660.0045
ARG 670.0035
PHE 680.0035
SER 690.0042
GLY 700.0045
LYS 710.0040
ARG 720.0039
LEU 730.0043
GLY 740.0041
ASP 750.0036
THR 760.0039
PHE 770.0036
VAL 780.0037
LEU 790.0033
THR 800.0036
LEU 810.0030
SER 820.0026
ASP 830.0014
PHE 840.0011
ARG 850.0022
ARG 860.0049
GLU 870.0056
ASN 880.0037
GLU 890.0021
GLY 900.0014
TYR 910.0021
TYR 920.0024
PHE 930.0025
CYS 940.0028
SER 950.0028
ALA 960.0023
LEU 970.0021
SER 980.0020
ASN 990.0017
SER 1000.0015
ILE 1010.0019
MET 1020.0020
TYR 1030.0023
PHE 1040.0025
SER 1050.0028
HIS 1060.0026
PHE 1070.0023
VAL 1080.0025
PRO 1090.0023
VAL 1100.0022
PHE 1110.0024
LEU 1120.0046
PRO 1130.0076
ALA 1140.0088
SER 10.0023
GLN 20.0023
PHE 30.0018
ARG 40.0019
VAL 50.0016
SER 60.0021
PRO 70.0024
LEU 80.0019
ASP 90.0023
ARG 100.0029
THR 110.0034
TRP 120.0041
ASN 130.0050
LEU 140.0057
GLY 150.0060
GLU 160.0052
THR 170.0046
VAL 180.0037
GLU 190.0032
LEU 200.0023
LYS 210.0020
CYS 220.0016
GLN 230.0020
VAL 240.0020
LEU 250.0026
LEU 260.0026
SER 270.0032
ASN 280.0028
PRO 290.0021
THR 300.0017
SER 310.0015
GLY 320.0011
CYS 330.0010
SER 340.0011
TRP 350.0012
LEU 360.0017
PHE 370.0021
GLN 380.0026
PRO 390.0031
ARG 400.0032
GLY 410.0032
ALA 420.0031
ALA 430.0029
ALA 440.0027
SER 450.0025
PRO 460.0024
THR 470.0023
PHE 480.0019
LEU 490.0016
LEU 500.0012
TYR 510.0010
LEU 520.0006
SER 530.0008
GLN 540.0007
ASN 550.0010
LYS 560.0009
PRO 570.0009
LYS 580.0013
ALA 590.0015
ALA 600.0018
GLU 610.0028
GLY 620.0036
LEU 630.0033
ASP 640.0039
THR 650.0033
GLN 660.0044
ARG 670.0043
PHE 680.0034
SER 690.0029
GLY 700.0023
LYS 710.0021
ARG 720.0019
LEU 730.0026
GLY 740.0027
ASP 750.0023
THR 760.0021
PHE 770.0017
VAL 780.0021
LEU 790.0022
THR 800.0030
LEU 810.0038
SER 820.0047
ASP 830.0054
PHE 840.0048
ARG 850.0053
ARG 860.0053
GLU 870.0051
ASN 880.0041
GLU 890.0037
GLY 900.0030
TYR 910.0023
TYR 920.0019
PHE 930.0015
CYS 940.0013
SER 950.0015
ALA 960.0016
LEU 970.0019
SER 980.0023
ASN 990.0027
SER 1000.0028
ILE 1010.0028
MET 1020.0024
TYR 1030.0021
PHE 1040.0018
SER 1050.0016
HIS 1060.0016
PHE 1070.0017
VAL 1080.0017
PRO 1090.0021
VAL 1100.0026
PHE 1110.0033
LEU 1120.0042
PRO 1130.0042
ALA 1140.0042

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.