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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0671
MET 10.0095
SER 20.0054
THR 30.0079
ILE 40.0057
THR 50.0164
LYS 60.0182
ASP 70.0184
GLN 80.0101
ILE 90.0065
LEU 100.0111
GLU 110.0070
GLY 120.0033
VAL 130.0048
ALA 140.0045
ALA 150.0047
LEU 160.0089
SER 170.0110
VAL 180.0105
MET 190.0083
GLU 200.0061
ILE 210.0059
VAL 220.0030
GLU 230.0021
LEU 240.0016
ILE 250.0044
SER 260.0087
ALA 270.0058
MET 280.0055
GLU 290.0128
GLU 300.0131
LYS 310.0067
PHE 320.0133
GLY 330.0206
VAL 340.0243
SER 350.0254
ALA 360.0315
ALA 370.0323
ALA 380.0243
VAL 390.0240
ALA 400.0297
ALA 410.0196
GLY 420.0143
PRO 430.0081
ALA 440.0075
ALA 450.0135
ALA 460.0169
VAL 470.0156
GLU 480.0114
ALA 490.0151
ALA 500.0166
GLU 510.0063
GLU 520.0054
GLN 530.0028
THR 540.0029
GLU 550.0039
PHE 560.0041
ASP 570.0055
VAL 580.0053
VAL 590.0062
LEU 600.0064
ALA 610.0062
SER 620.0063
PHE 630.0064
GLY 640.0056
GLU 650.0059
ASN 660.0063
LYS 670.0076
VAL 680.0083
ALA 690.0072
VAL 700.0068
ILE 710.0082
LYS 720.0084
ALA 730.0072
VAL 740.0077
ARG 750.0092
GLY 760.0090
ALA 770.0080
THR 780.0089
GLY 790.0103
LEU 800.0108
GLY 810.0117
LEU 820.0111
LYS 830.0117
GLU 840.0110
ALA 850.0094
LYS 860.0088
ASP 870.0094
LEU 880.0083
VAL 890.0073
GLU 900.0081
SER 910.0075
ALA 920.0067
PRO 930.0068
ALA 940.0073
VAL 950.0075
LEU 960.0076
LYS 970.0073
GLU 980.0071
GLY 990.0061
VAL 1000.0054
ASN 1010.0045
LYS 1020.0032
ASP 1030.0047
GLU 1040.0054
ALA 1050.0040
GLU 1060.0033
THR 1070.0049
LEU 1080.0053
LYS 1090.0037
LYS 1100.0037
SER 1110.0053
LEU 1120.0051
GLU 1130.0036
GLU 1140.0042
ALA 1150.0054
GLY 1160.0044
ALA 1170.0050
SER 1180.0045
VAL 1190.0045
GLU 1200.0045
ILE 1210.0040
LYS 1220.0052
GLU 1230.0047
ALA 1240.0058
ALA 1250.0073
ALA 1260.0075
LYS 1270.0068
ALA 1280.0059
TYR 1290.0052
LYS 1300.0051
ILE 1310.0066
ILE 1320.0088
SER 1330.0106
LEU 1340.0129
LYS 1350.0152
TYR 1360.0175
THR 1370.0187
ARG 1380.0189
LYS 1390.0204
VAL 1400.0198
CYS 1410.0192
ILE 1420.0162
GLY 1430.0192
PRO 1440.0163
GLY 1450.0180
PRO 1460.0183
GLY 1470.0155
LYS 1480.0127
ALA 1490.0153
TYR 1500.0139
LYS 1510.0142
ILE 1520.0165
ILE 1530.0140
SER 1540.0166
LEU 1550.0142
LYS 1560.0152
TYR 1570.0138
THR 1580.0136
ARG 1590.0123
LYS 1600.0120
VAL 1610.0107
CYS 1620.0095
GLY 1630.0092
PRO 1640.0092
GLY 1650.0087
PRO 1660.0095
GLY 1670.0109
GLY 1680.0112
LYS 1690.0109
ALA 1700.0105
TYR 1710.0097
LYS 1720.0102
ILE 1730.0109
ILE 1740.0113
SER 1750.0122
LEU 1760.0117
LYS 1770.0148
TYR 1780.0141
THR 1790.0174
ARG 1800.0171
LYS 1810.0220
VAL 1820.0210
GLY 1830.0241
PRO 1840.0235
GLY 1850.0242
PRO 1860.0220
GLY 1870.0191
ILE 1880.0205
ILE 1890.0169
SER 1900.0187
LEU 1910.0169
LYS 1920.0166
TYR 1930.0152
THR 1940.0147
ARG 1950.0134
LYS 1960.0096
VAL 1970.0090
CYS 1980.0076
ILE 1990.0079
GLN 2000.0076
LEU 2010.0057
GLY 2020.0067
GLY 2030.0073
PRO 2040.0068
GLY 2050.0064
PRO 2060.0050
GLY 2070.0043
ASN 2080.0047
ILE 2090.0035
LYS 2100.0022
THR 2110.0037
ALA 2120.0032
PHE 2130.0011
HIS 2140.0036
CYS 2150.0043
TYR 2160.0020
ALA 2170.0034
ALA 2180.0045
TYR 2190.0045
MET 2200.0050
THR 2210.0047
SER 2220.0040
ILE 2230.0035
LYS 2240.0031
ALA 2250.0034
CYS 2260.0124
ASP 2270.0169
LEU 2280.0327
LYS 2290.0465
LYS 2300.0601
PRO 2310.0671
LEU 2320.0598
MET 2330.0443
GLU 2340.0382
SER 2350.0378
GLY 2360.0236
TRP 2370.0181
SER 2380.0159
ASP 2390.0125
THR 2400.0090
ALA 2410.0097
HIS 2420.0093
GLY 2430.0101
LYS 2440.0103
LYS 2450.0116
SER 2460.0085
LEU 2470.0033
PRO 2480.0151
SER 2490.0243
SER 2500.0256
SER 2510.0096
SER 2520.0078
TYR 2530.0055
SER 2540.0036
TYR 2550.0016
ARG 2560.0008
ARG 2570.0024
LYS 2580.0037
LEU 2590.0061
THR 2600.0075
ASN 2610.0141
PRO 2620.0176
ALA 2630.0205
ASN 2640.0166
LYS 2650.0171
GLU 2660.0126
GLU 2670.0133
SER 2680.0114
ILE 2690.0105
LYS 2700.0105
LYS 2710.0080
GLN 2720.0081
LYS 2730.0074
TYR 2740.0073
SER 2750.0069
TYR 2760.0039
PRO 2770.0045
TRP 2780.0047
GLN 2790.0060
THR 2800.0116
SER 2810.0140
LYS 2820.0111
CYS 2830.0119
PHE 2840.0137
ASP 2880.0064
TYR 2890.0032
GLN 2900.0017
TYR 2910.0054
CYS 2970.0206
ASN 2980.0284
PRO 2990.0195
GLY 3000.0326
LYS 3010.0429
LYS 3020.0260
ASN 3030.0278
THR 3040.0351
ILE 3050.0361
SER 3060.0388
GLY 3070.0350
TYR 3080.0350
LYS 3090.0313
ARG 3100.0224
MET 3110.0210
MET 3120.0180
ALA 3130.0146
THR 3140.0066
LYS 3150.0101
ASP 3160.0083
SER 3170.0126
PHE 3180.0120
GLN 3190.0109
SER 3200.0057
PHE 3210.0063
ASN 3220.0054
LEU 3230.0054
THR 3240.0050
GLU 3250.0053
PRO 3260.0059
HIS 3270.0065
ILE 3280.0078
THR 3290.0090
THR 3300.0109
ASN 3310.0110
LYS 3320.0092
LEU 3330.0076
GLU 3340.0065
TRP 3350.0052
ILE 3360.0049
ASP 3370.0032
PRO 3380.0034
ASP 3390.0051
GLY 3400.0049
ASN 3410.0084
THR 3420.0021
ARG 3430.0135
GLY 3440.0205
GLY 3450.0215
GLY 3460.0365
GLY 10.0144
SER 20.0132
HIS 30.0118
SER 40.0102
MET 50.0088
ARG 60.0071
TYR 70.0061
PHE 80.0053
PHE 90.0048
THR 100.0045
SER 110.0050
VAL 120.0059
SER 130.0069
ARG 140.0079
PRO 150.0090
GLY 160.0105
ARG 170.0099
GLY 180.0090
GLU 190.0078
PRO 200.0068
ARG 210.0051
PHE 220.0048
ILE 230.0047
ALA 240.0050
VAL 250.0054
GLY 260.0076
TYR 270.0078
VAL 280.0091
ASP 290.0086
ASP 300.0069
THR 310.0078
GLN 320.0072
PHE 330.0081
VAL 340.0075
ARG 350.0064
PHE 360.0056
ASP 370.0053
SER 380.0052
ASP 390.0059
ALA 400.0064
ALA 410.0082
SER 420.0083
GLN 430.0069
ARG 440.0074
MET 450.0075
GLU 460.0081
PRO 470.0089
ARG 480.0084
ALA 490.0096
PRO 500.0111
TRP 510.0120
ILE 520.0112
GLU 530.0117
GLN 540.0133
GLU 550.0127
GLY 560.0135
PRO 570.0124
GLU 580.0123
TYR 590.0114
TRP 600.0101
ASP 610.0094
GLY 620.0092
GLU 630.0083
THR 640.0073
ARG 650.0069
LYS 660.0064
VAL 670.0055
LYS 680.0047
ALA 690.0051
HIS 700.0054
SER 710.0048
GLN 720.0055
THR 730.0060
HIS 740.0057
ARG 750.0064
VAL 760.0078
ASP 770.0071
LEU 780.0073
GLY 790.0085
THR 800.0084
LEU 810.0074
ARG 820.0080
GLY 830.0084
TYR 840.0074
TYR 850.0069
ASN 860.0069
GLN 870.0071
SER 880.0080
GLU 890.0092
ALA 900.0093
GLY 910.0080
SER 920.0073
HIS 930.0066
THR 940.0058
VAL 950.0054
GLN 960.0047
ARG 970.0049
MET 980.0053
TYR 990.0060
GLY 1000.0069
CYS 1010.0089
ASP 1020.0109
VAL 1030.0127
GLY 1040.0147
SER 1050.0163
ASP 1060.0171
TRP 1070.0148
ARG 1080.0142
PHE 1090.0123
LEU 1100.0129
ARG 1110.0100
GLY 1120.0083
TYR 1130.0071
HIS 1140.0057
GLN 1150.0053
TYR 1160.0049
ALA 1170.0050
TYR 1180.0056
ASP 1190.0057
GLY 1200.0049
LYS 1210.0039
ASP 1220.0038
TYR 1230.0050
ILE 1240.0054
ALA 1250.0052
LEU 1260.0066
LYS 1270.0079
GLU 1280.0087
ASP 1290.0100
LEU 1300.0085
ARG 1310.0096
SER 1320.0092
TRP 1330.0077
THR 1340.0070
ALA 1350.0069
ALA 1360.0047
ASP 1370.0052
MET 1380.0064
ALA 1390.0071
ALA 1400.0067
GLN 1410.0080
THR 1420.0090
THR 1430.0081
LYS 1440.0082
HIS 1450.0099
LYS 1460.0099
TRP 1470.0088
GLU 1480.0100
ALA 1490.0114
ALA 1500.0103
HIS 1510.0098
VAL 1520.0077
ALA 1530.0079
GLU 1540.0085
GLN 1550.0067
LEU 1560.0056
ARG 1570.0075
ALA 1580.0065
TYR 1590.0059
LEU 1600.0077
GLU 1610.0099
GLY 1620.0094
THR 1630.0084
CYS 1640.0091
VAL 1650.0113
GLU 1660.0125
TRP 1670.0115
LEU 1680.0115
ARG 1690.0133
ARG 1700.0132
TYR 1710.0123
LEU 1720.0129
GLU 1730.0147
ASN 1740.0141
GLY 1750.0126
LYS 1760.0136
GLU 1770.0121
THR 1780.0097
LEU 1790.0099
GLN 1800.0116
ARG 1810.0056
THR 1820.0057
ASP 1830.0041
ALA 1840.0058
PRO 1850.0061
LYS 1860.0066
THR 1870.0072
HIS 1880.0076
MET 1890.0075
THR 1900.0069
HIS 1910.0073
HIS 1920.0061
ALA 1930.0063
VAL 1940.0045
SER 1950.0058
ASP 1960.0082
HIS 1970.0066
GLU 1980.0048
ALA 1990.0055
THR 2000.0043
LEU 2010.0062
ARG 2020.0056
CYS 2030.0063
TRP 2040.0058
ALA 2050.0059
LEU 2060.0042
SER 2070.0029
PHE 2080.0040
TYR 2090.0045
PRO 2100.0058
ALA 2110.0049
GLU 2120.0065
ILE 2130.0069
THR 2140.0082
LEU 2150.0080
THR 2160.0083
TRP 2170.0077
GLN 2180.0089
ARG 2190.0086
ASP 2200.0104
GLY 2210.0102
GLU 2220.0087
ASP 2230.0084
GLN 2240.0062
THR 2250.0078
GLN 2260.0067
ASP 2270.0051
THR 2280.0049
GLU 2290.0040
LEU 2300.0047
VAL 2310.0039
GLU 2320.0036
THR 2330.0036
ARG 2340.0030
PRO 2350.0027
ALA 2360.0020
GLY 2370.0013
ASP 2380.0012
GLY 2390.0021
THR 2400.0025
PHE 2410.0031
GLN 2420.0034
LYS 2430.0041
TRP 2440.0047
ALA 2450.0055
ALA 2460.0040
VAL 2470.0042
VAL 2480.0033
VAL 2490.0051
PRO 2500.0055
SER 2510.0076
GLY 2520.0093
GLN 2530.0087
GLU 2540.0089
GLN 2550.0109
ARG 2560.0102
TYR 2570.0091
THR 2580.0101
CYS 2590.0092
HIS 2600.0104
VAL 2610.0094
GLN 2620.0096
HIS 2630.0080
GLU 2640.0078
GLY 2650.0062
LEU 2660.0092
PRO 2670.0113
LYS 2680.0130
PRO 2690.0126
LEU 2700.0118
THR 2710.0127
LEU 2720.0116
ARG 2730.0120
TRP 2740.0108
GLU 2750.0128
PRO 2760.0154
GLN 2780.0052
ARG 2790.0048
THR 2800.0045
PRO 2810.0042
LYS 2820.0041
ILE 2830.0038
GLN 2840.0037
VAL 2850.0032
TYR 2860.0031
SER 2870.0026
ARG 2880.0022
HIS 2890.0029
PRO 2900.0038
ALA 2910.0039
GLU 2920.0044
ASN 2930.0048
GLY 2940.0045
LYS 2950.0037
SER 2960.0028
ASN 2970.0023
PHE 2980.0017
LEU 2990.0020
ASN 3000.0021
CYS 3010.0024
TYR 3020.0029
VAL 3030.0034
SER 3040.0037
GLY 3050.0043
PHE 3060.0045
HIS 3070.0049
PRO 3080.0052
SER 3090.0048
ASP 3100.0042
ILE 3110.0040
GLU 3120.0035
VAL 3130.0021
ASP 3140.0016
LEU 3150.0020
LEU 3160.0030
LYS 3170.0038
ASN 3180.0049
GLY 3190.0044
GLU 3200.0037
ARG 3210.0025
ILE 3220.0022
GLU 3230.0021
LYS 3240.0016
VAL 3250.0005
GLU 3260.0009
HIS 3270.0018
SER 3280.0039
ASP 3290.0039
LEU 3300.0035
SER 3310.0040
PHE 3320.0043
SER 3330.0026
LYS 3340.0021
ASP 3350.0033
TRP 3360.0043
SER 3370.0045
PHE 3380.0043
TYR 3390.0038
LEU 3400.0030
LEU 3410.0025
TYR 3420.0019
TYR 3430.0010
THR 3440.0009
GLU 3450.0015
PHE 3460.0025
THR 3470.0034
PRO 3480.0039
THR 3490.0052
GLU 3500.0063
LYS 3510.0067
ASP 3520.0055
GLU 3530.0049
TYR 3540.0039
ALA 3550.0037
CYS 3560.0032
ARG 3570.0032
VAL 3580.0041
ASN 3590.0041
HIS 3600.0045
VAL 3610.0050
THR 3620.0054
LEU 3630.0058
SER 3640.0059
GLN 3650.0054
PRO 3660.0052
LYS 3670.0056
ILE 3680.0044
VAL 3690.0045
LYS 3700.0046
TRP 3710.0043
ASP 3720.0048
ARG 3730.0044
ASP 3740.0051
MET 3750.0050
SER 10.0048
GLN 20.0048
PHE 30.0049
ARG 40.0043
VAL 50.0054
SER 60.0055
PRO 70.0055
LEU 80.0047
ASP 90.0044
ARG 100.0052
THR 110.0064
TRP 120.0070
ASN 130.0070
LEU 140.0077
GLY 150.0084
GLU 160.0086
THR 170.0086
VAL 180.0081
GLU 190.0078
LEU 200.0075
LYS 210.0067
CYS 220.0060
GLN 230.0052
VAL 240.0052
LEU 250.0043
LEU 260.0060
SER 270.0048
ASN 280.0050
PRO 290.0067
THR 300.0071
SER 310.0072
GLY 320.0075
CYS 330.0076
SER 340.0081
TRP 350.0084
LEU 360.0090
PHE 370.0088
GLN 380.0086
PRO 390.0085
ARG 400.0080
GLY 410.0081
ALA 420.0088
ALA 430.0092
ALA 440.0086
SER 450.0091
PRO 460.0091
THR 470.0093
PHE 480.0091
LEU 490.0092
LEU 500.0090
TYR 510.0083
LEU 520.0081
SER 530.0073
GLN 540.0072
ASN 550.0077
LYS 560.0083
PRO 570.0086
LYS 580.0087
ALA 590.0094
ALA 600.0096
GLU 610.0100
GLY 620.0105
LEU 630.0103
ASP 640.0106
THR 650.0103
GLN 660.0109
ARG 670.0103
PHE 680.0095
SER 690.0090
GLY 700.0082
LYS 710.0077
ARG 720.0069
LEU 730.0064
GLY 740.0059
ASP 750.0056
THR 760.0063
PHE 770.0070
VAL 780.0075
LEU 790.0082
THR 800.0089
LEU 810.0090
SER 820.0095
ASP 830.0096
PHE 840.0089
ARG 850.0092
ARG 860.0074
GLU 870.0088
ASN 880.0092
GLU 890.0080
GLY 900.0086
TYR 910.0083
TYR 920.0083
PHE 930.0079
CYS 940.0079
SER 950.0080
ALA 960.0085
LEU 970.0079
SER 980.0073
ASN 990.0069
SER 1000.0073
ILE 1010.0091
MET 1020.0088
TYR 1030.0084
PHE 1040.0081
SER 1050.0078
HIS 1060.0063
PHE 1070.0068
VAL 1080.0068
PRO 1090.0067
VAL 1100.0075
PHE 1110.0067
LEU 1120.0064
PRO 1130.0050
ALA 1140.0041
SER 10.0068
GLN 20.0060
PHE 30.0066
ARG 40.0071
VAL 50.0082
SER 60.0089
PRO 70.0108
LEU 80.0109
ASP 90.0129
ARG 100.0144
THR 110.0159
TRP 120.0169
ASN 130.0193
LEU 140.0205
GLY 150.0199
GLU 160.0177
THR 170.0152
VAL 180.0137
GLU 190.0112
LEU 200.0096
LYS 210.0083
CYS 220.0075
GLN 230.0063
VAL 240.0057
LEU 250.0049
LEU 260.0056
SER 270.0052
ASN 280.0050
PRO 290.0051
THR 300.0050
SER 310.0059
GLY 320.0063
CYS 330.0070
SER 340.0082
TRP 350.0090
LEU 360.0097
PHE 370.0108
GLN 380.0112
PRO 390.0125
ARG 400.0123
GLY 410.0088
ALA 420.0087
ALA 430.0092
ALA 440.0092
SER 450.0092
PRO 460.0099
THR 470.0105
PHE 480.0099
LEU 490.0098
LEU 500.0088
TYR 510.0075
LEU 520.0061
SER 530.0048
GLN 540.0033
ASN 550.0038
LYS 560.0052
PRO 570.0066
LYS 580.0078
ALA 590.0092
ALA 600.0107
GLU 610.0132
GLY 620.0142
LEU 630.0129
ASP 640.0135
THR 650.0123
GLN 660.0136
ARG 670.0137
PHE 680.0120
SER 690.0097
GLY 700.0076
LYS 710.0065
ARG 720.0055
LEU 730.0052
GLY 740.0044
ASP 750.0048
THR 760.0056
PHE 770.0066
VAL 780.0079
LEU 790.0094
THR 800.0105
LEU 810.0132
SER 820.0150
ASP 830.0177
PHE 840.0175
ARG 850.0196
ARG 860.0205
GLU 870.0196
ASN 880.0165
GLU 890.0159
GLY 900.0134
TYR 910.0112
TYR 920.0105
PHE 930.0092
CYS 940.0083
SER 950.0081
ALA 960.0077
LEU 970.0076
SER 980.0073
ASN 990.0074
SER 1000.0080
ILE 1010.0080
MET 1020.0084
TYR 1030.0081
PHE 1040.0085
SER 1050.0084
HIS 1060.0075
PHE 1070.0093
VAL 1080.0101
PRO 1090.0118
VAL 1100.0132
PHE 1110.0154
LEU 1120.0183
PRO 1130.0191
ALA 1140.0200

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.