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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0735
MET 10.0110
SER 20.0074
THR 30.0063
ILE 40.0049
THR 50.0047
LYS 60.0047
ASP 70.0054
GLN 80.0050
ILE 90.0034
LEU 100.0036
GLU 110.0035
GLY 120.0036
VAL 130.0021
ALA 140.0031
ALA 150.0045
LEU 160.0072
SER 170.0102
VAL 180.0101
MET 190.0097
GLU 200.0072
ILE 210.0048
VAL 220.0045
GLU 230.0033
LEU 240.0022
ILE 250.0028
SER 260.0041
ALA 270.0028
MET 280.0004
GLU 290.0038
GLU 300.0054
LYS 310.0042
PHE 320.0013
GLY 330.0037
VAL 340.0044
SER 350.0076
ALA 360.0111
ALA 370.0133
ALA 380.0081
VAL 390.0101
ALA 400.0153
ALA 410.0118
GLY 420.0109
PRO 430.0066
ALA 440.0055
ALA 450.0068
ALA 460.0038
VAL 470.0054
GLU 480.0086
ALA 490.0094
ALA 500.0105
GLU 510.0102
GLU 520.0097
GLN 530.0079
THR 540.0099
GLU 550.0084
PHE 560.0076
ASP 570.0073
VAL 580.0073
VAL 590.0073
LEU 600.0078
ALA 610.0092
SER 620.0104
PHE 630.0108
GLY 640.0128
GLU 650.0148
ASN 660.0140
LYS 670.0130
VAL 680.0136
ALA 690.0125
VAL 700.0107
ILE 710.0107
LYS 720.0112
ALA 730.0098
VAL 740.0091
ARG 750.0101
GLY 760.0100
ALA 770.0092
THR 780.0095
GLY 790.0105
LEU 800.0106
GLY 810.0119
LEU 820.0120
LYS 830.0118
GLU 840.0101
ALA 850.0094
LYS 860.0095
ASP 870.0084
LEU 880.0073
VAL 890.0083
GLU 900.0092
SER 910.0067
ALA 920.0070
PRO 930.0071
ALA 940.0068
VAL 950.0069
LEU 960.0079
LYS 970.0082
GLU 980.0083
GLY 990.0089
VAL 1000.0089
ASN 1010.0098
LYS 1020.0091
ASP 1030.0097
GLU 1040.0095
ALA 1050.0082
GLU 1060.0080
THR 1070.0084
LEU 1080.0083
LYS 1090.0077
LYS 1100.0078
SER 1110.0085
LEU 1120.0088
GLU 1130.0091
GLU 1140.0095
ALA 1150.0106
GLY 1160.0107
ALA 1170.0098
SER 1180.0094
VAL 1190.0082
GLU 1200.0081
ILE 1210.0059
LYS 1220.0056
GLU 1230.0056
ALA 1240.0062
ALA 1250.0058
ALA 1260.0026
LYS 1270.0034
ALA 1280.0030
TYR 1290.0029
LYS 1300.0030
ILE 1310.0026
ILE 1320.0030
SER 1330.0028
LEU 1340.0032
LYS 1350.0031
TYR 1360.0039
THR 1370.0041
ARG 1380.0040
LYS 1390.0042
VAL 1400.0041
CYS 1410.0037
ILE 1420.0043
GLY 1430.0051
PRO 1440.0068
GLY 1450.0084
PRO 1460.0100
GLY 1470.0112
LYS 1480.0110
ALA 1490.0107
TYR 1500.0094
LYS 1510.0082
ILE 1520.0079
ILE 1530.0075
SER 1540.0075
LEU 1550.0072
LYS 1560.0066
TYR 1570.0067
THR 1580.0067
ARG 1590.0069
LYS 1600.0069
VAL 1610.0070
CYS 1620.0065
GLY 1630.0076
PRO 1640.0086
GLY 1650.0078
PRO 1660.0087
GLY 1670.0114
GLY 1680.0124
LYS 1690.0118
ALA 1700.0104
TYR 1710.0091
LYS 1720.0090
ILE 1730.0086
ILE 1740.0087
SER 1750.0084
LEU 1760.0086
LYS 1770.0090
TYR 1780.0088
THR 1790.0092
ARG 1800.0092
LYS 1810.0103
VAL 1820.0106
GLY 1830.0109
PRO 1840.0107
GLY 1850.0095
PRO 1860.0064
GLY 1870.0060
ILE 1880.0054
ILE 1890.0052
SER 1900.0051
LEU 1910.0041
LYS 1920.0040
TYR 1930.0042
THR 1940.0042
ARG 1950.0044
LYS 1960.0028
VAL 1970.0029
CYS 1980.0030
ILE 1990.0033
GLN 2000.0037
LEU 2010.0037
GLY 2020.0037
GLY 2030.0037
PRO 2040.0039
GLY 2050.0040
PRO 2060.0041
GLY 2070.0038
ASN 2080.0039
ILE 2090.0034
LYS 2100.0026
THR 2110.0031
ALA 2120.0031
PHE 2130.0022
HIS 2140.0021
CYS 2150.0026
TYR 2160.0040
ALA 2170.0041
ALA 2180.0040
TYR 2190.0041
MET 2200.0043
THR 2210.0065
SER 2220.0068
ILE 2230.0064
LYS 2240.0061
ALA 2250.0057
CYS 2260.0039
ASP 2270.0125
LEU 2280.0155
LYS 2290.0260
LYS 2300.0295
PRO 2310.0252
LEU 2320.0195
MET 2330.0155
GLU 2340.0092
SER 2350.0115
GLY 2360.0053
TRP 2370.0069
SER 2380.0097
ASP 2390.0115
THR 2400.0143
ALA 2410.0218
HIS 2420.0142
GLY 2430.0089
LYS 2440.0037
LYS 2450.0101
SER 2460.0103
LEU 2470.0089
PRO 2480.0127
SER 2490.0181
SER 2500.0144
SER 2510.0051
SER 2520.0091
TYR 2530.0093
SER 2540.0119
TYR 2550.0127
ARG 2560.0099
ARG 2570.0084
LYS 2580.0069
LEU 2590.0065
THR 2600.0061
ASN 2610.0068
PRO 2620.0083
ALA 2630.0038
ASN 2640.0026
LYS 2650.0027
GLU 2660.0029
GLU 2670.0037
SER 2680.0038
ILE 2690.0039
LYS 2700.0059
LYS 2710.0158
GLN 2720.0180
LYS 2730.0168
TYR 2740.0178
SER 2750.0181
TYR 2760.0139
PRO 2770.0041
TRP 2780.0062
GLN 2790.0088
THR 2800.0212
SER 2810.0296
LYS 2820.0212
CYS 2830.0236
PHE 2840.0257
ASP 2880.0045
TYR 2890.0027
GLN 2900.0042
TYR 2910.0078
CYS 2970.0374
ASN 2980.0432
PRO 2990.0154
GLY 3000.0432
LYS 3010.0234
LYS 3020.0366
ASN 3030.0389
THR 3040.0294
ILE 3050.0458
SER 3060.0648
GLY 3070.0679
TYR 3080.0705
LYS 3090.0590
ARG 3100.0557
MET 3110.0645
MET 3120.0555
ALA 3130.0556
THR 3140.0480
LYS 3150.0430
ASP 3160.0339
SER 3170.0347
PHE 3180.0309
GLN 3190.0206
SER 3200.0146
PHE 3210.0087
ASN 3220.0058
LEU 3230.0087
THR 3240.0092
GLU 3250.0154
PRO 3260.0181
HIS 3270.0297
ILE 3280.0378
THR 3290.0465
THR 3300.0554
ASN 3310.0532
LYS 3320.0420
LEU 3330.0321
GLU 3340.0243
TRP 3350.0141
ILE 3360.0041
ASP 3370.0053
PRO 3380.0043
ASP 3390.0121
GLY 3400.0159
ASN 3410.0210
THR 3420.0102
ARG 3430.0311
GLY 3440.0412
GLY 3450.0392
GLY 3460.0735
GLY 10.0045
SER 20.0044
HIS 30.0043
SER 40.0042
MET 50.0041
ARG 60.0039
TYR 70.0039
PHE 80.0040
PHE 90.0040
THR 100.0041
SER 110.0044
VAL 120.0047
SER 130.0051
ARG 140.0056
PRO 150.0059
GLY 160.0072
ARG 170.0070
GLY 180.0067
GLU 190.0060
PRO 200.0054
ARG 210.0049
PHE 220.0046
ILE 230.0044
ALA 240.0041
VAL 250.0039
GLY 260.0039
TYR 270.0039
VAL 280.0038
ASP 290.0040
ASP 300.0040
THR 310.0041
GLN 320.0042
PHE 330.0041
VAL 340.0042
ARG 350.0043
PHE 360.0044
ASP 370.0048
SER 380.0049
ASP 390.0053
ALA 400.0053
ALA 410.0058
SER 420.0055
GLN 430.0052
ARG 440.0049
MET 450.0046
GLU 460.0047
PRO 470.0046
ARG 480.0046
ALA 490.0046
PRO 500.0048
TRP 510.0048
ILE 520.0047
GLU 530.0049
GLN 540.0050
GLU 550.0048
GLY 560.0048
PRO 570.0048
GLU 580.0046
TYR 590.0045
TRP 600.0047
ASP 610.0046
GLY 620.0044
GLU 630.0044
THR 640.0047
ARG 650.0045
LYS 660.0042
VAL 670.0043
LYS 680.0045
ALA 690.0043
HIS 700.0042
SER 710.0046
GLN 720.0047
THR 730.0045
HIS 740.0046
ARG 750.0051
VAL 760.0051
ASP 770.0049
LEU 780.0051
GLY 790.0054
THR 800.0051
LEU 810.0048
ARG 820.0051
GLY 830.0051
TYR 840.0047
TYR 850.0046
ASN 860.0046
GLN 870.0046
SER 880.0045
GLU 890.0047
ALA 900.0046
GLY 910.0050
SER 920.0049
HIS 930.0047
THR 940.0045
VAL 950.0044
GLN 960.0040
ARG 970.0039
MET 980.0039
TYR 990.0038
GLY 1000.0038
CYS 1010.0038
ASP 1020.0040
VAL 1030.0043
GLY 1040.0046
SER 1050.0049
ASP 1060.0053
TRP 1070.0048
ARG 1080.0047
PHE 1090.0042
LEU 1100.0041
ARG 1110.0031
GLY 1120.0032
TYR 1130.0032
HIS 1140.0034
GLN 1150.0034
TYR 1160.0039
ALA 1170.0041
TYR 1180.0043
ASP 1190.0045
GLY 1200.0042
LYS 1210.0039
ASP 1220.0036
TYR 1230.0038
ILE 1240.0036
ALA 1250.0033
LEU 1260.0032
LYS 1270.0026
GLU 1280.0024
ASP 1290.0023
LEU 1300.0028
ARG 1310.0029
SER 1320.0030
TRP 1330.0031
THR 1340.0030
ALA 1350.0033
ALA 1360.0030
ASP 1370.0034
MET 1380.0036
ALA 1390.0042
ALA 1400.0040
GLN 1410.0037
THR 1420.0043
THR 1430.0044
LYS 1440.0039
HIS 1450.0043
LYS 1460.0048
TRP 1470.0045
GLU 1480.0042
ALA 1490.0049
ALA 1500.0051
HIS 1510.0045
VAL 1520.0044
ALA 1530.0037
GLU 1540.0037
GLN 1550.0042
LEU 1560.0037
ARG 1570.0032
ALA 1580.0034
TYR 1590.0038
LEU 1600.0036
GLU 1610.0037
GLY 1620.0039
THR 1630.0042
CYS 1640.0042
VAL 1650.0042
GLU 1660.0045
TRP 1670.0045
LEU 1680.0044
ARG 1690.0046
ARG 1700.0047
TYR 1710.0045
LEU 1720.0045
GLU 1730.0047
ASN 1740.0047
GLY 1750.0046
LYS 1760.0045
GLU 1770.0044
THR 1780.0043
LEU 1790.0043
GLN 1800.0044
ARG 1810.0046
THR 1820.0049
ASP 1830.0045
ALA 1840.0051
PRO 1850.0049
LYS 1860.0051
THR 1870.0053
HIS 1880.0054
MET 1890.0053
THR 1900.0051
HIS 1910.0055
HIS 1920.0049
ALA 1930.0050
VAL 1940.0043
SER 1950.0049
ASP 1960.0063
HIS 1970.0054
GLU 1980.0044
ALA 1990.0046
THR 2000.0039
LEU 2010.0045
ARG 2020.0042
CYS 2030.0045
TRP 2040.0043
ALA 2050.0045
LEU 2060.0041
SER 2070.0037
PHE 2080.0040
TYR 2090.0040
PRO 2100.0043
ALA 2110.0038
GLU 2120.0045
ILE 2130.0047
THR 2140.0050
LEU 2150.0047
THR 2160.0052
TRP 2170.0049
GLN 2180.0057
ARG 2190.0058
ASP 2200.0069
GLY 2210.0063
GLU 2220.0057
ASP 2230.0054
GLN 2240.0045
THR 2250.0054
GLN 2260.0052
ASP 2270.0042
THR 2280.0039
GLU 2290.0032
LEU 2300.0034
VAL 2310.0032
GLU 2320.0031
THR 2330.0032
ARG 2340.0029
PRO 2350.0029
ALA 2360.0029
GLY 2370.0025
ASP 2380.0026
GLY 2390.0028
THR 2400.0032
PHE 2410.0034
GLN 2420.0034
LYS 2430.0034
TRP 2440.0036
ALA 2450.0037
ALA 2460.0031
VAL 2470.0034
VAL 2480.0033
VAL 2490.0042
PRO 2500.0048
SER 2510.0057
GLY 2520.0067
GLN 2530.0063
GLU 2540.0062
GLN 2550.0074
ARG 2560.0068
TYR 2570.0060
THR 2580.0064
CYS 2590.0058
HIS 2600.0064
VAL 2610.0056
GLN 2620.0059
HIS 2630.0055
GLU 2640.0058
GLY 2650.0056
LEU 2660.0068
PRO 2670.0081
LYS 2680.0087
PRO 2690.0080
LEU 2700.0075
THR 2710.0080
LEU 2720.0074
ARG 2730.0078
TRP 2740.0071
GLU 2750.0085
PRO 2760.0101
GLN 2780.0049
ARG 2790.0047
THR 2800.0046
PRO 2810.0044
LYS 2820.0051
ILE 2830.0050
GLN 2840.0048
VAL 2850.0049
TYR 2860.0045
SER 2870.0040
ARG 2880.0035
HIS 2890.0038
PRO 2900.0045
ALA 2910.0053
GLU 2920.0057
ASN 2930.0069
GLY 2940.0070
LYS 2950.0058
SER 2960.0054
ASN 2970.0046
PHE 2980.0040
LEU 2990.0044
ASN 3000.0038
CYS 3010.0040
TYR 3020.0036
VAL 3030.0036
SER 3040.0039
GLY 3050.0044
PHE 3060.0041
HIS 3070.0039
PRO 3080.0042
SER 3090.0035
ASP 3100.0028
ILE 3110.0032
GLU 3120.0033
VAL 3130.0040
ASP 3140.0051
LEU 3150.0055
LEU 3160.0072
LYS 3170.0083
ASN 3180.0099
GLY 3190.0096
GLU 3200.0092
ARG 3210.0077
ILE 3220.0070
GLU 3230.0068
LYS 3240.0057
VAL 3250.0045
GLU 3260.0031
HIS 3270.0023
SER 3280.0034
ASP 3290.0034
LEU 3300.0034
SER 3310.0035
PHE 3320.0037
SER 3330.0028
LYS 3340.0023
ASP 3350.0031
TRP 3360.0036
SER 3370.0040
PHE 3380.0037
TYR 3390.0034
LEU 3400.0028
LEU 3410.0027
TYR 3420.0029
TYR 3430.0035
THR 3440.0043
GLU 3450.0048
PHE 3460.0058
THR 3470.0065
PRO 3480.0067
THR 3490.0083
GLU 3500.0094
LYS 3510.0106
ASP 3520.0095
GLU 3530.0088
TYR 3540.0073
ALA 3550.0069
CYS 3560.0058
ARG 3570.0063
VAL 3580.0054
ASN 3590.0049
HIS 3600.0045
VAL 3610.0043
THR 3620.0055
LEU 3630.0067
SER 3640.0068
GLN 3650.0071
PRO 3660.0074
LYS 3670.0082
ILE 3680.0078
VAL 3690.0073
LYS 3700.0074
TRP 3710.0065
ASP 3720.0066
ARG 3730.0054
ASP 3740.0056
MET 3750.0055
SER 10.0027
GLN 20.0029
PHE 30.0024
ARG 40.0015
VAL 50.0016
SER 60.0025
PRO 70.0027
LEU 80.0020
ASP 90.0028
ARG 100.0033
THR 110.0046
TRP 120.0049
ASN 130.0051
LEU 140.0053
GLY 150.0067
GLU 160.0052
THR 170.0052
VAL 180.0041
GLU 190.0041
LEU 200.0032
LYS 210.0021
CYS 220.0019
GLN 230.0021
VAL 240.0028
LEU 250.0028
LEU 260.0040
SER 270.0033
ASN 280.0038
PRO 290.0047
THR 300.0053
SER 310.0046
GLY 320.0044
CYS 330.0039
SER 340.0039
TRP 350.0035
LEU 360.0042
PHE 370.0038
GLN 380.0037
PRO 390.0036
ARG 400.0038
GLY 410.0059
ALA 420.0039
ALA 430.0024
ALA 440.0030
SER 450.0021
PRO 460.0037
THR 470.0038
PHE 480.0040
LEU 490.0039
LEU 500.0041
TYR 510.0043
LEU 520.0038
SER 530.0033
GLN 540.0031
ASN 550.0036
LYS 560.0044
PRO 570.0043
LYS 580.0046
ALA 590.0047
ALA 600.0049
GLU 610.0054
GLY 620.0052
LEU 630.0049
ASP 640.0050
THR 650.0053
GLN 660.0060
ARG 670.0053
PHE 680.0048
SER 690.0046
GLY 700.0040
LYS 710.0037
ARG 720.0036
LEU 730.0033
GLY 740.0033
ASP 750.0028
THR 760.0028
PHE 770.0033
VAL 780.0034
LEU 790.0036
THR 800.0041
LEU 810.0049
SER 820.0055
ASP 830.0054
PHE 840.0046
ARG 850.0046
ARG 860.0039
GLU 870.0043
ASN 880.0044
GLU 890.0038
GLY 900.0037
TYR 910.0030
TYR 920.0033
PHE 930.0035
CYS 940.0039
SER 950.0044
ALA 960.0051
LEU 970.0052
SER 980.0053
ASN 990.0055
SER 1000.0055
ILE 1010.0065
MET 1020.0057
TYR 1030.0051
PHE 1040.0043
SER 1050.0038
HIS 1060.0032
PHE 1070.0029
VAL 1080.0029
PRO 1090.0024
VAL 1100.0030
PHE 1110.0042
LEU 1120.0046
PRO 1130.0061
ALA 1140.0065
SER 10.0023
GLN 20.0028
PHE 30.0035
ARG 40.0040
VAL 50.0047
SER 60.0056
PRO 70.0066
LEU 80.0056
ASP 90.0070
ARG 100.0080
THR 110.0083
TRP 120.0096
ASN 130.0111
LEU 140.0121
GLY 150.0132
GLU 160.0119
THR 170.0111
VAL 180.0093
GLU 190.0084
LEU 200.0067
LYS 210.0060
CYS 220.0051
GLN 230.0047
VAL 240.0042
LEU 250.0034
LEU 260.0037
SER 270.0036
ASN 280.0040
PRO 290.0043
THR 300.0048
SER 310.0051
GLY 320.0055
CYS 330.0054
SER 340.0057
TRP 350.0058
LEU 360.0052
PHE 370.0053
GLN 380.0047
PRO 390.0048
ARG 400.0039
GLY 410.0034
ALA 420.0037
ALA 430.0040
ALA 440.0038
SER 450.0041
PRO 460.0046
THR 470.0055
PHE 480.0060
LEU 490.0064
LEU 500.0066
TYR 510.0060
LEU 520.0054
SER 530.0048
GLN 540.0044
ASN 550.0049
LYS 560.0062
PRO 570.0064
LYS 580.0068
ALA 590.0074
ALA 600.0079
GLU 610.0099
GLY 620.0105
LEU 630.0098
ASP 640.0105
THR 650.0102
GLN 660.0117
ARG 670.0109
PHE 680.0095
SER 690.0086
GLY 700.0071
LYS 710.0069
ARG 720.0063
LEU 730.0061
GLY 740.0053
ASP 750.0047
THR 760.0051
PHE 770.0058
VAL 780.0068
LEU 790.0073
THR 800.0085
LEU 810.0098
SER 820.0114
ASP 830.0123
PHE 840.0109
ARG 850.0114
ARG 860.0104
GLU 870.0101
ASN 880.0089
GLU 890.0073
GLY 900.0055
TYR 910.0045
TYR 920.0051
PHE 930.0045
CYS 940.0047
SER 950.0047
ALA 960.0048
LEU 970.0049
SER 980.0048
ASN 990.0049
SER 1000.0049
ILE 1010.0046
MET 1020.0045
TYR 1030.0041
PHE 1040.0039
SER 1050.0038
HIS 1060.0025
PHE 1070.0032
VAL 1080.0046
PRO 1090.0047
VAL 1100.0062
PHE 1110.0070
LEU 1120.0087
PRO 1130.0090
ALA 1140.0082

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.