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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0886
MET 10.0019
SER 20.0012
THR 30.0015
ILE 40.0011
THR 50.0030
LYS 60.0032
ASP 70.0032
GLN 80.0017
ILE 90.0012
LEU 100.0019
GLU 110.0009
GLY 120.0005
VAL 130.0011
ALA 140.0011
ALA 150.0013
LEU 160.0020
SER 170.0024
VAL 180.0023
MET 190.0017
GLU 200.0012
ILE 210.0012
VAL 220.0007
GLU 230.0005
LEU 240.0004
ILE 250.0011
SER 260.0020
ALA 270.0014
MET 280.0010
GLU 290.0024
GLU 300.0025
LYS 310.0011
PHE 320.0021
GLY 330.0034
VAL 340.0042
SER 350.0046
ALA 360.0062
ALA 370.0056
ALA 380.0030
VAL 390.0038
ALA 400.0049
ALA 410.0015
GLY 420.0035
PRO 430.0044
ALA 440.0050
ALA 450.0032
ALA 460.0036
VAL 470.0045
GLU 480.0056
ALA 490.0052
ALA 500.0052
GLU 510.0041
GLU 520.0039
GLN 530.0034
THR 540.0031
GLU 550.0026
PHE 560.0027
ASP 570.0027
VAL 580.0028
VAL 590.0030
LEU 600.0031
ALA 610.0036
SER 620.0036
PHE 630.0034
GLY 640.0038
GLU 650.0038
ASN 660.0036
LYS 670.0033
VAL 680.0031
ALA 690.0034
VAL 700.0032
ILE 710.0028
LYS 720.0029
ALA 730.0031
VAL 740.0028
ARG 750.0026
GLY 760.0027
ALA 770.0027
THR 780.0024
GLY 790.0023
LEU 800.0023
GLY 810.0024
LEU 820.0024
LYS 830.0023
GLU 840.0024
ALA 850.0025
LYS 860.0024
ASP 870.0023
LEU 880.0026
VAL 890.0027
GLU 900.0026
SER 910.0027
ALA 920.0029
PRO 930.0030
ALA 940.0028
VAL 950.0027
LEU 960.0025
LYS 970.0023
GLU 980.0024
GLY 990.0024
VAL 1000.0024
ASN 1010.0025
LYS 1020.0030
ASP 1030.0029
GLU 1040.0026
ALA 1050.0029
GLU 1060.0033
THR 1070.0032
LEU 1080.0030
LYS 1090.0034
LYS 1100.0036
SER 1110.0035
LEU 1120.0034
GLU 1130.0039
GLU 1140.0040
ALA 1150.0037
GLY 1160.0038
ALA 1170.0035
SER 1180.0037
VAL 1190.0034
GLU 1200.0036
ILE 1210.0026
LYS 1220.0026
GLU 1230.0025
ALA 1240.0022
ALA 1250.0024
ALA 1260.0009
LYS 1270.0005
ALA 1280.0002
TYR 1290.0004
LYS 1300.0007
ILE 1310.0041
ILE 1320.0050
SER 1330.0062
LEU 1340.0071
LYS 1350.0085
TYR 1360.0088
THR 1370.0089
ARG 1380.0088
LYS 1390.0091
VAL 1400.0086
CYS 1410.0088
ILE 1420.0081
GLY 1430.0091
PRO 1440.0083
GLY 1450.0094
PRO 1460.0086
GLY 1470.0055
LYS 1480.0046
ALA 1490.0028
TYR 1500.0030
LYS 1510.0026
ILE 1520.0037
ILE 1530.0036
SER 1540.0050
LEU 1550.0051
LYS 1560.0061
TYR 1570.0056
THR 1580.0058
ARG 1590.0053
LYS 1600.0054
VAL 1610.0049
CYS 1620.0047
GLY 1630.0039
PRO 1640.0028
GLY 1650.0039
PRO 1660.0048
GLY 1670.0039
GLY 1680.0021
LYS 1690.0019
ALA 1700.0019
TYR 1710.0029
LYS 1720.0031
ILE 1730.0039
ILE 1740.0040
SER 1750.0049
LEU 1760.0042
LYS 1770.0046
TYR 1780.0036
THR 1790.0043
ARG 1800.0037
LYS 1810.0048
VAL 1820.0041
GLY 1830.0047
PRO 1840.0039
GLY 1850.0053
PRO 1860.0064
GLY 1870.0057
ILE 1880.0072
ILE 1890.0064
SER 1900.0075
LEU 1910.0071
LYS 1920.0073
TYR 1930.0067
THR 1940.0069
ARG 1950.0064
LYS 1960.0057
VAL 1970.0043
CYS 1980.0028
ILE 1990.0019
GLN 2000.0004
LEU 2010.0007
GLY 2020.0011
GLY 2030.0012
PRO 2040.0012
GLY 2050.0014
PRO 2060.0010
GLY 2070.0011
ASN 2080.0012
ILE 2090.0012
LYS 2100.0012
THR 2110.0013
ALA 2120.0012
PHE 2130.0011
HIS 2140.0012
CYS 2150.0012
TYR 2160.0007
ALA 2170.0007
ALA 2180.0008
TYR 2190.0008
MET 2200.0010
THR 2210.0011
SER 2220.0012
ILE 2230.0012
LYS 2240.0013
ALA 2250.0019
CYS 2260.0085
ASP 2270.0131
LEU 2280.0167
LYS 2290.0186
LYS 2300.0226
PRO 2310.0315
LEU 2320.0271
MET 2330.0229
GLU 2340.0376
SER 2350.0433
GLY 2360.0343
TRP 2370.0236
SER 2380.0345
ASP 2390.0340
THR 2400.0518
ALA 2410.0727
HIS 2420.0418
GLY 2430.0373
LYS 2440.0195
LYS 2450.0290
SER 2460.0483
LEU 2470.0367
PRO 2480.0439
SER 2490.0497
SER 2500.0284
SER 2510.0162
SER 2520.0271
TYR 2530.0282
SER 2540.0344
TYR 2550.0389
ARG 2560.0234
ARG 2570.0164
LYS 2580.0122
LEU 2590.0208
THR 2600.0263
ASN 2610.0330
PRO 2620.0408
ALA 2630.0381
ASN 2640.0265
LYS 2650.0227
GLU 2660.0171
GLU 2670.0203
SER 2680.0073
ILE 2690.0024
LYS 2700.0170
LYS 2710.0442
GLN 2720.0502
LYS 2730.0474
TYR 2740.0518
SER 2750.0540
TYR 2760.0432
PRO 2770.0126
TRP 2780.0182
GLN 2790.0236
THR 2800.0632
SER 2810.0886
LYS 2820.0661
CYS 2830.0714
PHE 2840.0778
ASP 2880.0145
TYR 2890.0070
GLN 2900.0070
TYR 2910.0065
CYS 2970.0170
ASN 2980.0134
PRO 2990.0046
GLY 3000.0071
LYS 3010.0042
LYS 3020.0074
ASN 3030.0085
THR 3040.0073
ILE 3050.0108
SER 3060.0131
GLY 3070.0144
TYR 3080.0143
LYS 3090.0122
ARG 3100.0119
MET 3110.0132
MET 3120.0107
ALA 3130.0103
THR 3140.0093
LYS 3150.0083
ASP 3160.0064
SER 3170.0069
PHE 3180.0068
GLN 3190.0054
SER 3200.0041
PHE 3210.0039
ASN 3220.0027
LEU 3230.0044
THR 3240.0030
GLU 3250.0062
PRO 3260.0093
HIS 3270.0182
ILE 3280.0245
THR 3290.0320
THR 3300.0388
ASN 3310.0381
LYS 3320.0296
LEU 3330.0220
GLU 3340.0175
TRP 3350.0099
ILE 3360.0068
ASP 3370.0048
PRO 3380.0055
ASP 3390.0053
GLY 3400.0048
ASN 3410.0059
THR 3420.0057
ARG 3430.0188
GLY 3440.0291
GLY 3450.0378
GLY 3460.0512
GLY 10.0025
SER 20.0022
HIS 30.0018
SER 40.0014
MET 50.0011
ARG 60.0007
TYR 70.0006
PHE 80.0005
PHE 90.0007
THR 100.0010
SER 110.0013
VAL 120.0014
SER 130.0015
ARG 140.0018
PRO 150.0018
GLY 160.0020
ARG 170.0019
GLY 180.0018
GLU 190.0018
PRO 200.0017
ARG 210.0019
PHE 220.0015
ILE 230.0012
ALA 240.0009
VAL 250.0007
GLY 260.0007
TYR 270.0007
VAL 280.0010
ASP 290.0011
ASP 300.0009
THR 310.0007
GLN 320.0006
PHE 330.0009
VAL 340.0011
ARG 350.0012
PHE 360.0016
ASP 370.0018
SER 380.0021
ASP 390.0025
ALA 400.0025
ALA 410.0032
SER 420.0030
GLN 430.0028
ARG 440.0025
MET 450.0020
GLU 460.0019
PRO 470.0016
ARG 480.0012
ALA 490.0011
PRO 500.0014
TRP 510.0017
ILE 520.0018
GLU 530.0021
GLN 540.0025
GLU 550.0026
GLY 560.0033
PRO 570.0034
GLU 580.0035
TYR 590.0029
TRP 600.0027
ASP 610.0031
GLY 620.0028
GLU 630.0023
THR 640.0024
ARG 650.0026
LYS 660.0019
VAL 670.0016
LYS 680.0020
ALA 690.0017
HIS 700.0012
SER 710.0013
GLN 720.0014
THR 730.0010
HIS 740.0010
ARG 750.0014
VAL 760.0010
ASP 770.0009
LEU 780.0011
GLY 790.0012
THR 800.0010
LEU 810.0009
ARG 820.0009
GLY 830.0008
TYR 840.0009
TYR 850.0009
ASN 860.0006
GLN 870.0006
SER 880.0006
GLU 890.0007
ALA 900.0009
GLY 910.0017
SER 920.0016
HIS 930.0014
THR 940.0012
VAL 950.0010
GLN 960.0008
ARG 970.0006
MET 980.0004
TYR 990.0005
GLY 1000.0008
CYS 1010.0013
ASP 1020.0017
VAL 1030.0022
GLY 1040.0027
SER 1050.0031
ASP 1060.0034
TRP 1070.0028
ARG 1080.0028
PHE 1090.0023
LEU 1100.0022
ARG 1110.0013
GLY 1120.0010
TYR 1130.0007
HIS 1140.0004
GLN 1150.0005
TYR 1160.0006
ALA 1170.0008
TYR 1180.0010
ASP 1190.0012
GLY 1200.0011
LYS 1210.0011
ASP 1220.0010
TYR 1230.0009
ILE 1240.0007
ALA 1250.0006
LEU 1260.0004
LYS 1270.0006
GLU 1280.0008
ASP 1290.0007
LEU 1300.0005
ARG 1310.0004
SER 1320.0004
TRP 1330.0005
THR 1340.0008
ALA 1350.0010
ALA 1360.0009
ASP 1370.0009
MET 1380.0010
ALA 1390.0009
ALA 1400.0009
GLN 1410.0010
THR 1420.0011
THR 1430.0009
LYS 1440.0008
HIS 1450.0010
LYS 1460.0011
TRP 1470.0008
GLU 1480.0008
ALA 1490.0011
ALA 1500.0011
HIS 1510.0009
VAL 1520.0009
ALA 1530.0005
GLU 1540.0007
GLN 1550.0010
LEU 1560.0009
ARG 1570.0009
ALA 1580.0014
TYR 1590.0015
LEU 1600.0013
GLU 1610.0018
GLY 1620.0022
THR 1630.0021
CYS 1640.0018
VAL 1650.0021
GLU 1660.0026
TRP 1670.0023
LEU 1680.0020
ARG 1690.0025
ARG 1700.0025
TYR 1710.0020
LEU 1720.0020
GLU 1730.0024
ASN 1740.0022
GLY 1750.0017
LYS 1760.0018
GLU 1770.0014
THR 1780.0010
LEU 1790.0013
GLN 1800.0018
ARG 1810.0016
THR 1820.0017
ASP 1830.0017
ALA 1840.0018
PRO 1850.0018
LYS 1860.0018
THR 1870.0017
HIS 1880.0017
MET 1890.0015
THR 1900.0016
HIS 1910.0014
HIS 1920.0015
ALA 1930.0014
VAL 1940.0015
SER 1950.0015
ASP 1960.0015
HIS 1970.0010
GLU 1980.0009
ALA 1990.0008
THR 2000.0009
LEU 2010.0010
ARG 2020.0011
CYS 2030.0012
TRP 2040.0014
ALA 2050.0015
LEU 2060.0016
SER 2070.0016
PHE 2080.0015
TYR 2090.0014
PRO 2100.0013
ALA 2110.0012
GLU 2120.0011
ILE 2130.0011
THR 2140.0009
LEU 2150.0009
THR 2160.0007
TRP 2170.0005
GLN 2180.0004
ARG 2190.0003
ASP 2200.0006
GLY 2210.0007
GLU 2220.0008
ASP 2230.0008
GLN 2240.0007
THR 2250.0009
GLN 2260.0009
ASP 2270.0007
THR 2280.0004
GLU 2290.0002
LEU 2300.0006
VAL 2310.0011
GLU 2320.0011
THR 2330.0011
ARG 2340.0012
PRO 2350.0013
ALA 2360.0013
GLY 2370.0013
ASP 2380.0014
GLY 2390.0014
THR 2400.0014
PHE 2410.0014
GLN 2420.0013
LYS 2430.0011
TRP 2440.0011
ALA 2450.0010
ALA 2460.0006
VAL 2470.0003
VAL 2480.0005
VAL 2490.0003
PRO 2500.0005
SER 2510.0007
GLY 2520.0004
GLN 2530.0002
GLU 2540.0004
GLN 2550.0004
ARG 2560.0002
TYR 2570.0004
THR 2580.0007
CYS 2590.0009
HIS 2600.0010
VAL 2610.0012
GLN 2620.0012
HIS 2630.0013
GLU 2640.0015
GLY 2650.0017
LEU 2660.0017
PRO 2670.0019
LYS 2680.0017
PRO 2690.0014
LEU 2700.0014
THR 2710.0013
LEU 2720.0013
ARG 2730.0012
TRP 2740.0011
GLU 2750.0013
PRO 2760.0016
GLN 2780.0017
ARG 2790.0016
THR 2800.0017
PRO 2810.0016
LYS 2820.0016
ILE 2830.0015
GLN 2840.0015
VAL 2850.0015
TYR 2860.0015
SER 2870.0014
ARG 2880.0015
HIS 2890.0018
PRO 2900.0020
ALA 2910.0020
GLU 2920.0023
ASN 2930.0023
GLY 2940.0022
LYS 2950.0021
SER 2960.0017
ASN 2970.0016
PHE 2980.0013
LEU 2990.0013
ASN 3000.0012
CYS 3010.0013
TYR 3020.0012
VAL 3030.0013
SER 3040.0013
GLY 3050.0013
PHE 3060.0014
HIS 3070.0014
PRO 3080.0014
SER 3090.0013
ASP 3100.0015
ILE 3110.0015
GLU 3120.0016
VAL 3130.0016
ASP 3140.0016
LEU 3150.0015
LEU 3160.0017
LYS 3170.0018
ASN 3180.0022
GLY 3190.0023
GLU 3200.0021
ARG 3210.0018
ILE 3220.0015
GLU 3230.0014
LYS 3240.0012
VAL 3250.0011
GLU 3260.0011
HIS 3270.0010
SER 3280.0009
ASP 3290.0010
LEU 3300.0011
SER 3310.0008
PHE 3320.0009
SER 3330.0008
LYS 3340.0009
ASP 3350.0011
TRP 3360.0010
SER 3370.0011
PHE 3380.0011
TYR 3390.0011
LEU 3400.0011
LEU 3410.0010
TYR 3420.0011
TYR 3430.0010
THR 3440.0010
GLU 3450.0011
PHE 3460.0013
THR 3470.0016
PRO 3480.0019
THR 3490.0021
GLU 3500.0025
LYS 3510.0025
ASP 3520.0022
GLU 3530.0021
TYR 3540.0018
ALA 3550.0018
CYS 3560.0017
ARG 3570.0019
VAL 3580.0017
ASN 3590.0018
HIS 3600.0019
VAL 3610.0020
THR 3620.0020
LEU 3630.0021
SER 3640.0021
GLN 3650.0020
PRO 3660.0018
LYS 3670.0017
ILE 3680.0021
VAL 3690.0020
LYS 3700.0019
TRP 3710.0018
ASP 3720.0019
ARG 3730.0019
ASP 3740.0021
MET 3750.0018
SER 10.0012
GLN 20.0010
PHE 30.0013
ARG 40.0014
VAL 50.0016
SER 60.0021
PRO 70.0022
LEU 80.0021
ASP 90.0024
ARG 100.0024
THR 110.0026
TRP 120.0023
ASN 130.0020
LEU 140.0014
GLY 150.0019
GLU 160.0024
THR 170.0025
VAL 180.0023
GLU 190.0025
LEU 200.0024
LYS 210.0021
CYS 220.0018
GLN 230.0016
VAL 240.0013
LEU 250.0011
LEU 260.0009
SER 270.0010
ASN 280.0008
PRO 290.0009
THR 300.0009
SER 310.0013
GLY 320.0015
CYS 330.0016
SER 340.0016
TRP 350.0017
LEU 360.0017
PHE 370.0015
GLN 380.0014
PRO 390.0014
ARG 400.0014
GLY 410.0021
ALA 420.0024
ALA 430.0026
ALA 440.0021
SER 450.0021
PRO 460.0013
THR 470.0016
PHE 480.0017
LEU 490.0020
LEU 500.0021
TYR 510.0019
LEU 520.0020
SER 530.0018
GLN 540.0018
ASN 550.0020
LYS 560.0027
PRO 570.0025
LYS 580.0024
ALA 590.0025
ALA 600.0023
GLU 610.0023
GLY 620.0024
LEU 630.0024
ASP 640.0025
THR 650.0026
GLN 660.0029
ARG 670.0026
PHE 680.0024
SER 690.0026
GLY 700.0026
LYS 710.0023
ARG 720.0021
LEU 730.0022
GLY 740.0019
ASP 750.0017
THR 760.0020
PHE 770.0020
VAL 780.0023
LEU 790.0023
THR 800.0026
LEU 810.0024
SER 820.0025
ASP 830.0021
PHE 840.0018
ARG 850.0012
ARG 860.0006
GLU 870.0005
ASN 880.0012
GLU 890.0012
GLY 900.0015
TYR 910.0015
TYR 920.0016
PHE 930.0015
CYS 940.0016
SER 950.0014
ALA 960.0010
LEU 970.0008
SER 980.0006
ASN 990.0005
SER 1000.0007
ILE 1010.0006
MET 1020.0006
TYR 1030.0007
PHE 1040.0010
SER 1050.0013
HIS 1060.0012
PHE 1070.0013
VAL 1080.0015
PRO 1090.0016
VAL 1100.0018
PHE 1110.0019
LEU 1120.0019
PRO 1130.0024
ALA 1140.0024
SER 10.0026
GLN 20.0025
PHE 30.0018
ARG 40.0015
VAL 50.0009
SER 60.0008
PRO 70.0013
LEU 80.0018
ASP 90.0024
ARG 100.0029
THR 110.0038
TRP 120.0043
ASN 130.0054
LEU 140.0061
GLY 150.0061
GLU 160.0051
THR 170.0044
VAL 180.0034
GLU 190.0027
LEU 200.0017
LYS 210.0014
CYS 220.0012
GLN 230.0019
VAL 240.0022
LEU 250.0029
LEU 260.0029
SER 270.0037
ASN 280.0036
PRO 290.0030
THR 300.0031
SER 310.0023
GLY 320.0020
CYS 330.0014
SER 340.0010
TRP 350.0009
LEU 360.0009
PHE 370.0015
GLN 380.0019
PRO 390.0026
ARG 400.0032
GLY 410.0023
ALA 420.0020
ALA 430.0014
ALA 440.0015
SER 450.0012
PRO 460.0013
THR 470.0011
PHE 480.0008
LEU 490.0012
LEU 500.0013
TYR 510.0013
LEU 520.0017
SER 530.0019
GLN 540.0023
ASN 550.0022
LYS 560.0024
PRO 570.0020
LYS 580.0016
ALA 590.0015
ALA 600.0013
GLU 610.0018
GLY 620.0031
LEU 630.0032
ASP 640.0046
THR 650.0046
GLN 660.0057
ARG 670.0049
PHE 680.0039
SER 690.0037
GLY 700.0030
LYS 710.0030
ARG 720.0031
LEU 730.0035
GLY 740.0037
ASP 750.0031
THR 760.0024
PHE 770.0021
VAL 780.0022
LEU 790.0022
THR 800.0030
LEU 810.0040
SER 820.0048
ASP 830.0055
PHE 840.0049
ARG 850.0056
ARG 860.0057
GLU 870.0052
ASN 880.0041
GLU 890.0040
GLY 900.0033
TYR 910.0021
TYR 920.0015
PHE 930.0009
CYS 940.0008
SER 950.0011
ALA 960.0015
LEU 970.0016
SER 980.0021
ASN 990.0022
SER 1000.0020
ILE 1010.0020
MET 1020.0016
TYR 1030.0016
PHE 1040.0014
SER 1050.0013
HIS 1060.0017
PHE 1070.0017
VAL 1080.0017
PRO 1090.0025
VAL 1100.0028
PHE 1110.0041
LEU 1120.0051
PRO 1130.0055
ALA 1140.0063

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.