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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1083
MET 10.1083
SER 20.0832
THR 30.0484
ILE 40.0455
THR 50.0385
LYS 60.0744
ASP 70.0642
GLN 80.0441
ILE 90.0619
LEU 100.0685
GLU 110.0432
GLY 120.0422
VAL 130.0349
ALA 140.0254
ALA 150.0209
LEU 160.0438
SER 170.0561
VAL 180.0525
MET 190.0652
GLU 200.0576
ILE 210.0355
VAL 220.0366
GLU 230.0451
LEU 240.0364
ILE 250.0128
SER 260.0102
ALA 270.0246
MET 280.0411
GLU 290.0348
GLU 300.0578
LYS 310.0835
PHE 320.0903
GLY 330.0855
VAL 340.0593
SER 350.0236
ALA 360.0225
ALA 370.0282
ALA 380.0110
VAL 390.0387
ALA 400.0513
ALA 410.0245
GLY 420.0252
PRO 430.0255
ALA 440.0149
ALA 450.0092
ALA 460.0158
VAL 470.0173
GLU 480.0080
ALA 490.0057
ALA 500.0062
GLU 510.0046
GLU 520.0036
GLN 530.0027
THR 540.0024
GLU 550.0022
PHE 560.0021
ASP 570.0013
VAL 580.0011
VAL 590.0008
LEU 600.0008
ALA 610.0020
SER 620.0025
PHE 630.0025
GLY 640.0031
GLU 650.0039
ASN 660.0031
LYS 670.0033
VAL 680.0036
ALA 690.0024
VAL 700.0018
ILE 710.0027
LYS 720.0028
ALA 730.0018
VAL 740.0021
ARG 750.0033
GLY 760.0032
ALA 770.0029
THR 780.0035
GLY 790.0045
LEU 800.0045
GLY 810.0054
LEU 820.0050
LYS 830.0054
GLU 840.0045
ALA 850.0034
LYS 860.0037
ASP 870.0035
LEU 880.0022
VAL 890.0022
GLU 900.0032
SER 910.0020
ALA 920.0018
PRO 930.0016
ALA 940.0009
VAL 950.0004
LEU 960.0010
LYS 970.0015
GLU 980.0013
GLY 990.0020
VAL 1000.0027
ASN 1010.0036
LYS 1020.0040
ASP 1030.0048
GLU 1040.0040
ALA 1050.0030
GLU 1060.0037
THR 1070.0037
LEU 1080.0025
LYS 1090.0021
LYS 1100.0027
SER 1110.0019
LEU 1120.0007
GLU 1130.0014
GLU 1140.0010
ALA 1150.0005
GLY 1160.0014
ALA 1170.0013
SER 1180.0019
VAL 1190.0015
GLU 1200.0022
ILE 1210.0022
LYS 1220.0020
GLU 1230.0021
ALA 1240.0014
ALA 1250.0013
ALA 1260.0004
LYS 1270.0003
ALA 1280.0002
TYR 1290.0002
LYS 1300.0002
ILE 1310.0011
ILE 1320.0012
SER 1330.0013
LEU 1340.0013
LYS 1350.0015
TYR 1360.0019
THR 1370.0018
ARG 1380.0018
LYS 1390.0018
VAL 1400.0018
CYS 1410.0022
ILE 1420.0024
GLY 1430.0026
PRO 1440.0026
GLY 1450.0030
PRO 1460.0031
GLY 1470.0029
LYS 1480.0026
ALA 1490.0021
TYR 1500.0020
LYS 1510.0016
ILE 1520.0015
ILE 1530.0015
SER 1540.0014
LEU 1550.0015
LYS 1560.0015
TYR 1570.0015
THR 1580.0015
ARG 1590.0014
LYS 1600.0015
VAL 1610.0014
CYS 1620.0015
GLY 1630.0014
PRO 1640.0014
GLY 1650.0018
PRO 1660.0022
GLY 1670.0019
GLY 1680.0013
LYS 1690.0013
ALA 1700.0010
TYR 1710.0012
LYS 1720.0010
ILE 1730.0013
ILE 1740.0012
SER 1750.0015
LEU 1760.0014
LYS 1770.0012
TYR 1780.0012
THR 1790.0011
ARG 1800.0012
LYS 1810.0011
VAL 1820.0013
GLY 1830.0014
PRO 1840.0017
GLY 1850.0019
PRO 1860.0019
GLY 1870.0017
ILE 1880.0017
ILE 1890.0017
SER 1900.0016
LEU 1910.0014
LYS 1920.0015
TYR 1930.0015
THR 1940.0015
ARG 1950.0015
LYS 1960.0012
VAL 1970.0010
CYS 1980.0008
ILE 1990.0006
GLN 2000.0005
LEU 2010.0003
GLY 2020.0004
GLY 2030.0006
PRO 2040.0007
GLY 2050.0007
PRO 2060.0007
GLY 2070.0006
ASN 2080.0006
ILE 2090.0006
LYS 2100.0005
THR 2110.0002
ALA 2120.0003
PHE 2130.0003
HIS 2140.0003
CYS 2150.0003
TYR 2160.0003
ALA 2170.0004
ALA 2180.0004
TYR 2190.0005
MET 2200.0006
THR 2210.0005
SER 2220.0005
ILE 2230.0007
LYS 2240.0008
ALA 2250.0009
CYS 2260.0011
ASP 2270.0014
LEU 2280.0011
LYS 2290.0011
LYS 2300.0009
PRO 2310.0010
LEU 2320.0006
MET 2330.0005
GLU 2340.0004
SER 2350.0006
GLY 2360.0005
TRP 2370.0006
SER 2380.0008
ASP 2390.0010
THR 2400.0011
ALA 2410.0020
HIS 2420.0013
GLY 2430.0007
LYS 2440.0002
LYS 2450.0009
SER 2460.0006
LEU 2470.0006
PRO 2480.0007
SER 2490.0008
SER 2500.0009
SER 2510.0005
SER 2520.0007
TYR 2530.0004
SER 2540.0006
TYR 2550.0004
ARG 2560.0006
ARG 2570.0006
LYS 2580.0004
LEU 2590.0005
THR 2600.0005
ASN 2610.0007
PRO 2620.0006
ALA 2630.0008
ASN 2640.0007
LYS 2650.0009
GLU 2660.0007
GLU 2670.0007
SER 2680.0003
ILE 2690.0004
LYS 2700.0004
LYS 2710.0008
GLN 2720.0010
LYS 2730.0011
TYR 2740.0012
SER 2750.0014
TYR 2760.0011
PRO 2770.0004
TRP 2780.0005
GLN 2790.0009
THR 2800.0018
SER 2810.0022
LYS 2820.0017
CYS 2830.0019
PHE 2840.0021
ASP 2880.0008
TYR 2890.0004
GLN 2900.0002
TYR 2910.0007
CYS 2970.0033
ASN 2980.0029
PRO 2990.0025
GLY 3000.0038
LYS 3010.0037
LYS 3020.0040
ASN 3030.0038
THR 3040.0027
ILE 3050.0036
SER 3060.0042
GLY 3070.0048
TYR 3080.0047
LYS 3090.0040
ARG 3100.0039
MET 3110.0044
MET 3120.0036
ALA 3130.0036
THR 3140.0026
LYS 3150.0021
ASP 3160.0012
SER 3170.0010
PHE 3180.0010
GLN 3190.0009
SER 3200.0008
PHE 3210.0014
ASN 3220.0012
LEU 3230.0009
THR 3240.0008
GLU 3250.0004
PRO 3260.0006
HIS 3270.0011
ILE 3280.0017
THR 3290.0025
THR 3300.0032
ASN 3310.0033
LYS 3320.0025
LEU 3330.0019
GLU 3340.0016
TRP 3350.0012
ILE 3360.0014
ASP 3370.0015
PRO 3380.0015
ASP 3390.0015
GLY 3400.0016
ASN 3410.0017
THR 3420.0015
ARG 3430.0025
GLY 3440.0041
GLY 3450.0046
GLY 3460.0074
GLY 10.0021
SER 20.0018
HIS 30.0015
SER 40.0012
MET 50.0009
ARG 60.0007
TYR 70.0005
PHE 80.0005
PHE 90.0006
THR 100.0008
SER 110.0008
VAL 120.0009
SER 130.0010
ARG 140.0010
PRO 150.0011
GLY 160.0012
ARG 170.0011
GLY 180.0010
GLU 190.0009
PRO 200.0008
ARG 210.0009
PHE 220.0007
ILE 230.0005
ALA 240.0003
VAL 250.0003
GLY 260.0005
TYR 270.0007
VAL 280.0010
ASP 290.0010
ASP 300.0007
THR 310.0008
GLN 320.0006
PHE 330.0007
VAL 340.0005
ARG 350.0004
PHE 360.0004
ASP 370.0005
SER 380.0007
ASP 390.0009
ALA 400.0008
ALA 410.0012
SER 420.0011
GLN 430.0009
ARG 440.0008
MET 450.0006
GLU 460.0008
PRO 470.0009
ARG 480.0008
ALA 490.0011
PRO 500.0014
TRP 510.0015
ILE 520.0012
GLU 530.0014
GLN 540.0016
GLU 550.0013
GLY 560.0014
PRO 570.0012
GLU 580.0010
TYR 590.0009
TRP 600.0008
ASP 610.0008
GLY 620.0005
GLU 630.0004
THR 640.0005
ARG 650.0004
LYS 660.0002
VAL 670.0003
LYS 680.0005
ALA 690.0005
HIS 700.0005
SER 710.0008
GLN 720.0005
THR 730.0005
HIS 740.0011
ARG 750.0012
VAL 760.0010
ASP 770.0010
LEU 780.0011
GLY 790.0011
THR 800.0011
LEU 810.0010
ARG 820.0010
GLY 830.0011
TYR 840.0010
TYR 850.0010
ASN 860.0007
GLN 870.0006
SER 880.0007
GLU 890.0006
ALA 900.0007
GLY 910.0012
SER 920.0011
HIS 930.0010
THR 940.0009
VAL 950.0009
GLN 960.0009
ARG 970.0008
MET 980.0007
TYR 990.0008
GLY 1000.0009
CYS 1010.0012
ASP 1020.0015
VAL 1030.0017
GLY 1040.0021
SER 1050.0023
ASP 1060.0024
TRP 1070.0020
ARG 1080.0020
PHE 1090.0018
LEU 1100.0020
ARG 1110.0016
GLY 1120.0013
TYR 1130.0012
HIS 1140.0011
GLN 1150.0011
TYR 1160.0009
ALA 1170.0009
TYR 1180.0010
ASP 1190.0010
GLY 1200.0008
LYS 1210.0008
ASP 1220.0008
TYR 1230.0010
ILE 1240.0011
ALA 1250.0010
LEU 1260.0013
LYS 1270.0015
GLU 1280.0015
ASP 1290.0018
LEU 1300.0017
ARG 1310.0019
SER 1320.0018
TRP 1330.0015
THR 1340.0013
ALA 1350.0013
ALA 1360.0009
ASP 1370.0010
MET 1380.0011
ALA 1390.0012
ALA 1400.0012
GLN 1410.0014
THR 1420.0016
THR 1430.0015
LYS 1440.0015
HIS 1450.0018
LYS 1460.0019
TRP 1470.0018
GLU 1480.0020
ALA 1490.0022
ALA 1500.0021
HIS 1510.0021
VAL 1520.0018
ALA 1530.0017
GLU 1540.0019
GLN 1550.0016
LEU 1560.0013
ARG 1570.0016
ALA 1580.0014
TYR 1590.0010
LEU 1600.0012
GLU 1610.0015
GLY 1620.0012
THR 1630.0009
CYS 1640.0010
VAL 1650.0013
GLU 1660.0014
TRP 1670.0012
LEU 1680.0013
ARG 1690.0016
ARG 1700.0015
TYR 1710.0014
LEU 1720.0016
GLU 1730.0019
ASN 1740.0017
GLY 1750.0016
LYS 1760.0019
GLU 1770.0019
THR 1780.0014
LEU 1790.0014
GLN 1800.0017
ARG 1810.0011
THR 1820.0009
ASP 1830.0007
ALA 1840.0006
PRO 1850.0004
LYS 1860.0004
THR 1870.0004
HIS 1880.0004
MET 1890.0005
THR 1900.0006
HIS 1910.0006
HIS 1920.0006
ALA 1930.0005
VAL 1940.0005
SER 1950.0005
ASP 1960.0004
HIS 1970.0004
GLU 1980.0005
ALA 1990.0005
THR 2000.0005
LEU 2010.0005
ARG 2020.0005
CYS 2030.0005
TRP 2040.0004
ALA 2050.0004
LEU 2060.0003
SER 2070.0004
PHE 2080.0004
TYR 2090.0006
PRO 2100.0007
ALA 2110.0005
GLU 2120.0005
ILE 2130.0005
THR 2140.0006
LEU 2150.0006
THR 2160.0006
TRP 2170.0005
GLN 2180.0005
ARG 2190.0005
ASP 2200.0005
GLY 2210.0005
GLU 2220.0004
ASP 2230.0005
GLN 2240.0004
THR 2250.0005
GLN 2260.0004
ASP 2270.0004
THR 2280.0004
GLU 2290.0005
LEU 2300.0005
VAL 2310.0005
GLU 2320.0005
THR 2330.0004
ARG 2340.0004
PRO 2350.0003
ALA 2360.0004
GLY 2370.0004
ASP 2380.0004
GLY 2390.0004
THR 2400.0004
PHE 2410.0003
GLN 2420.0003
LYS 2430.0004
TRP 2440.0004
ALA 2450.0005
ALA 2460.0005
VAL 2470.0005
VAL 2480.0005
VAL 2490.0005
PRO 2500.0005
SER 2510.0005
GLY 2520.0005
GLN 2530.0005
GLU 2540.0005
GLN 2550.0006
ARG 2560.0006
TYR 2570.0005
THR 2580.0006
CYS 2590.0006
HIS 2600.0006
VAL 2610.0006
GLN 2620.0006
HIS 2630.0006
GLU 2640.0007
GLY 2650.0006
LEU 2660.0005
PRO 2670.0006
LYS 2680.0006
PRO 2690.0006
LEU 2700.0005
THR 2710.0006
LEU 2720.0006
ARG 2730.0006
TRP 2740.0006
GLU 2750.0006
PRO 2760.0006
GLN 2780.0008
ARG 2790.0008
THR 2800.0008
PRO 2810.0008
LYS 2820.0006
ILE 2830.0007
GLN 2840.0006
VAL 2850.0007
TYR 2860.0006
SER 2870.0006
ARG 2880.0005
HIS 2890.0006
PRO 2900.0007
ALA 2910.0009
GLU 2920.0011
ASN 2930.0013
GLY 2940.0013
LYS 2950.0011
SER 2960.0010
ASN 2970.0008
PHE 2980.0007
LEU 2990.0007
ASN 3000.0006
CYS 3010.0006
TYR 3020.0005
VAL 3030.0006
SER 3040.0006
GLY 3050.0006
PHE 3060.0008
HIS 3070.0009
PRO 3080.0010
SER 3090.0010
ASP 3100.0011
ILE 3110.0010
GLU 3120.0011
VAL 3130.0010
ASP 3140.0010
LEU 3150.0009
LEU 3160.0011
LYS 3170.0012
ASN 3180.0014
GLY 3190.0015
GLU 3200.0014
ARG 3210.0013
ILE 3220.0011
GLU 3230.0011
LYS 3240.0010
VAL 3250.0008
GLU 3260.0007
HIS 3270.0006
SER 3280.0004
ASP 3290.0005
LEU 3300.0005
SER 3310.0005
PHE 3320.0006
SER 3330.0007
LYS 3340.0007
ASP 3350.0007
TRP 3360.0008
SER 3370.0007
PHE 3380.0007
TYR 3390.0006
LEU 3400.0006
LEU 3410.0005
TYR 3420.0006
TYR 3430.0007
THR 3440.0008
GLU 3450.0008
PHE 3460.0010
THR 3470.0011
PRO 3480.0011
THR 3490.0013
GLU 3500.0014
LYS 3510.0015
ASP 3520.0014
GLU 3530.0012
TYR 3540.0010
ALA 3550.0010
CYS 3560.0009
ARG 3570.0011
VAL 3580.0011
ASN 3590.0012
HIS 3600.0012
VAL 3610.0012
THR 3620.0010
LEU 3630.0011
SER 3640.0011
GLN 3650.0013
PRO 3660.0014
LYS 3670.0013
ILE 3680.0011
VAL 3690.0010
LYS 3700.0010
TRP 3710.0008
ASP 3720.0008
ARG 3730.0008
ASP 3740.0007
MET 3750.0006
SER 10.0004
GLN 20.0005
PHE 30.0005
ARG 40.0006
VAL 50.0006
SER 60.0007
PRO 70.0006
LEU 80.0004
ASP 90.0003
ARG 100.0004
THR 110.0005
TRP 120.0007
ASN 130.0009
LEU 140.0011
GLY 150.0012
GLU 160.0011
THR 170.0011
VAL 180.0010
GLU 190.0010
LEU 200.0008
LYS 210.0008
CYS 220.0007
GLN 230.0007
VAL 240.0006
LEU 250.0006
LEU 260.0005
SER 270.0005
ASN 280.0005
PRO 290.0005
THR 300.0004
SER 310.0006
GLY 320.0007
CYS 330.0007
SER 340.0007
TRP 350.0007
LEU 360.0007
PHE 370.0007
GLN 380.0007
PRO 390.0007
ARG 400.0007
GLY 410.0006
ALA 420.0007
ALA 430.0006
ALA 440.0006
SER 450.0006
PRO 460.0006
THR 470.0007
PHE 480.0008
LEU 490.0008
LEU 500.0009
TYR 510.0007
LEU 520.0008
SER 530.0008
GLN 540.0008
ASN 550.0008
LYS 560.0010
PRO 570.0009
LYS 580.0009
ALA 590.0009
ALA 600.0009
GLU 610.0010
GLY 620.0013
LEU 630.0012
ASP 640.0015
THR 650.0015
GLN 660.0016
ARG 670.0015
PHE 680.0013
SER 690.0013
GLY 700.0012
LYS 710.0010
ARG 720.0010
LEU 730.0010
GLY 740.0010
ASP 750.0008
THR 760.0009
PHE 770.0009
VAL 780.0010
LEU 790.0010
THR 800.0011
LEU 810.0012
SER 820.0013
ASP 830.0013
PHE 840.0012
ARG 850.0012
ARG 860.0011
GLU 870.0013
ASN 880.0011
GLU 890.0009
GLY 900.0008
TYR 910.0007
TYR 920.0007
PHE 930.0006
CYS 940.0006
SER 950.0006
ALA 960.0005
LEU 970.0005
SER 980.0005
ASN 990.0004
SER 1000.0004
ILE 1010.0004
MET 1020.0005
TYR 1030.0005
PHE 1040.0005
SER 1050.0005
HIS 1060.0004
PHE 1070.0005
VAL 1080.0005
PRO 1090.0006
VAL 1100.0007
PHE 1110.0007
LEU 1120.0007
PRO 1130.0006
ALA 1140.0007
SER 10.0006
GLN 20.0005
PHE 30.0005
ARG 40.0005
VAL 50.0005
SER 60.0005
PRO 70.0006
LEU 80.0007
ASP 90.0008
ARG 100.0008
THR 110.0009
TRP 120.0009
ASN 130.0010
LEU 140.0010
GLY 150.0009
GLU 160.0008
THR 170.0007
VAL 180.0006
GLU 190.0005
LEU 200.0005
LYS 210.0004
CYS 220.0004
GLN 230.0004
VAL 240.0004
LEU 250.0004
LEU 260.0004
SER 270.0004
ASN 280.0004
PRO 290.0003
THR 300.0003
SER 310.0003
GLY 320.0003
CYS 330.0004
SER 340.0004
TRP 350.0005
LEU 360.0005
PHE 370.0006
GLN 380.0006
PRO 390.0007
ARG 400.0007
GLY 410.0005
ALA 420.0006
ALA 430.0006
ALA 440.0005
SER 450.0005
PRO 460.0006
THR 470.0005
PHE 480.0005
LEU 490.0005
LEU 500.0004
TYR 510.0004
LEU 520.0003
SER 530.0003
GLN 540.0003
ASN 550.0003
LYS 560.0003
PRO 570.0003
LYS 580.0004
ALA 590.0004
ALA 600.0005
GLU 610.0006
GLY 620.0006
LEU 630.0006
ASP 640.0005
THR 650.0005
GLN 660.0004
ARG 670.0005
PHE 680.0005
SER 690.0004
GLY 700.0003
LYS 710.0002
ARG 720.0002
LEU 730.0002
GLY 740.0002
ASP 750.0002
THR 760.0003
PHE 770.0003
VAL 780.0003
LEU 790.0004
THR 800.0004
LEU 810.0006
SER 820.0006
ASP 830.0008
PHE 840.0008
ARG 850.0009
ARG 860.0010
GLU 870.0010
ASN 880.0008
GLU 890.0008
GLY 900.0008
TYR 910.0007
TYR 920.0006
PHE 930.0006
CYS 940.0005
SER 950.0005
ALA 960.0005
LEU 970.0005
SER 980.0005
ASN 990.0005
SER 1000.0006
ILE 1010.0006
MET 1020.0006
TYR 1030.0006
PHE 1040.0006
SER 1050.0006
HIS 1060.0006
PHE 1070.0006
VAL 1080.0006
PRO 1090.0007
VAL 1100.0007
PHE 1110.0009
LEU 1120.0010
PRO 1130.0010
ALA 1140.0011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.