CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0560
MET 10.0043
SER 20.0037
THR 30.0035
ILE 40.0026
THR 50.0089
LYS 60.0106
ASP 70.0097
GLN 80.0042
ILE 90.0048
LEU 100.0067
GLU 110.0026
GLY 120.0019
VAL 130.0043
ALA 140.0040
ALA 150.0041
LEU 160.0058
SER 170.0063
VAL 180.0059
MET 190.0038
GLU 200.0029
ILE 210.0038
VAL 220.0029
GLU 230.0029
LEU 240.0025
ILE 250.0039
SER 260.0054
ALA 270.0039
MET 280.0044
GLU 290.0070
GLU 300.0065
LYS 310.0047
PHE 320.0081
GLY 330.0102
VAL 340.0118
SER 350.0116
ALA 360.0154
ALA 370.0119
ALA 380.0049
VAL 390.0096
ALA 400.0114
ALA 410.0049
GLY 420.0141
PRO 430.0172
ALA 440.0191
ALA 450.0121
ALA 460.0103
VAL 470.0131
GLU 480.0182
ALA 490.0174
ALA 500.0160
GLU 510.0134
GLU 520.0131
GLN 530.0106
THR 540.0093
GLU 550.0069
PHE 560.0077
ASP 570.0073
VAL 580.0075
VAL 590.0077
LEU 600.0078
ALA 610.0086
SER 620.0083
PHE 630.0079
GLY 640.0082
GLU 650.0079
ASN 660.0081
LYS 670.0079
VAL 680.0084
ALA 690.0089
VAL 700.0086
ILE 710.0086
LYS 720.0094
ALA 730.0095
VAL 740.0091
ARG 750.0099
GLY 760.0096
ALA 770.0094
THR 780.0097
GLY 790.0107
LEU 800.0105
GLY 810.0118
LEU 820.0110
LYS 830.0109
GLU 840.0102
ALA 850.0093
LYS 860.0087
ASP 870.0081
LEU 880.0079
VAL 890.0076
GLU 900.0071
SER 910.0070
ALA 920.0071
PRO 930.0073
ALA 940.0071
VAL 950.0072
LEU 960.0066
LYS 970.0064
GLU 980.0065
GLY 990.0067
VAL 1000.0073
ASN 1010.0085
LYS 1020.0104
ASP 1030.0111
GLU 1040.0096
ALA 1050.0095
GLU 1060.0112
THR 1070.0111
LEU 1080.0096
LYS 1090.0100
LYS 1100.0112
SER 1110.0105
LEU 1120.0094
GLU 1130.0102
GLU 1140.0105
ALA 1150.0093
GLY 1160.0089
ALA 1170.0084
SER 1180.0092
VAL 1190.0089
GLU 1200.0094
ILE 1210.0075
LYS 1220.0070
GLU 1230.0069
ALA 1240.0051
ALA 1250.0063
ALA 1260.0062
LYS 1270.0053
ALA 1280.0055
TYR 1290.0049
LYS 1300.0051
ILE 1310.0195
ILE 1320.0206
SER 1330.0254
LEU 1340.0271
LYS 1350.0324
TYR 1360.0335
THR 1370.0304
ARG 1380.0281
LYS 1390.0259
VAL 1400.0238
CYS 1410.0307
ILE 1420.0301
GLY 1430.0378
PRO 1440.0404
GLY 1450.0515
PRO 1460.0560
GLY 1470.0515
LYS 1480.0444
ALA 1490.0324
TYR 1500.0235
LYS 1510.0106
ILE 1520.0052
ILE 1530.0084
SER 1540.0157
LEU 1550.0227
LYS 1560.0285
TYR 1570.0276
THR 1580.0273
ARG 1590.0268
LYS 1600.0268
VAL 1610.0220
CYS 1620.0230
GLY 1630.0219
PRO 1640.0274
GLY 1650.0362
PRO 1660.0504
GLY 1670.0493
GLY 1680.0436
LYS 1690.0310
ALA 1700.0215
TYR 1710.0188
LYS 1720.0209
ILE 1730.0235
ILE 1740.0275
SER 1750.0318
LEU 1760.0299
LYS 1770.0255
TYR 1780.0174
THR 1790.0136
ARG 1800.0061
LYS 1810.0102
VAL 1820.0151
GLY 1830.0169
PRO 1840.0212
GLY 1850.0172
PRO 1860.0200
GLY 1870.0145
ILE 1880.0169
ILE 1890.0169
SER 1900.0223
LEU 1910.0246
LYS 1920.0263
TYR 1930.0269
THR 1940.0287
ARG 1950.0296
LYS 1960.0257
VAL 1970.0206
CYS 1980.0154
ILE 1990.0117
GLN 2000.0077
LEU 2010.0063
GLY 2020.0062
GLY 2030.0064
PRO 2040.0066
GLY 2050.0070
PRO 2060.0061
GLY 2070.0061
ASN 2080.0062
ILE 2090.0056
LYS 2100.0052
THR 2110.0053
ALA 2120.0053
PHE 2130.0045
HIS 2140.0041
CYS 2150.0046
TYR 2160.0067
ALA 2170.0049
ALA 2180.0025
TYR 2190.0051
MET 2200.0070
THR 2210.0052
SER 2220.0050
ILE 2230.0092
LYS 2240.0086
ALA 2250.0127
CYS 2260.0187
ASP 2270.0241
LEU 2280.0208
LYS 2290.0213
LYS 2300.0170
PRO 2310.0169
LEU 2320.0065
MET 2330.0091
GLU 2340.0181
SER 2350.0204
GLY 2360.0128
TRP 2370.0138
SER 2380.0152
ASP 2390.0168
THR 2400.0165
ALA 2410.0288
HIS 2420.0147
GLY 2430.0161
LYS 2440.0071
LYS 2450.0125
SER 2460.0143
LEU 2470.0063
PRO 2480.0168
SER 2490.0294
SER 2500.0294
SER 2510.0126
SER 2520.0121
TYR 2530.0065
SER 2540.0094
TYR 2550.0072
ARG 2560.0121
ARG 2570.0112
LYS 2580.0079
LEU 2590.0076
THR 2600.0062
ASN 2610.0073
PRO 2620.0086
ALA 2630.0126
ASN 2640.0125
LYS 2650.0119
GLU 2660.0087
GLU 2670.0071
SER 2680.0051
ILE 2690.0101
LYS 2700.0122
LYS 2710.0134
GLN 2720.0150
LYS 2730.0157
TYR 2740.0173
SER 2750.0195
TYR 2760.0153
PRO 2770.0132
TRP 2780.0198
GLN 2790.0253
THR 2800.0321
SER 2810.0351
LYS 2820.0296
CYS 2830.0327
PHE 2840.0423
ASP 2880.0164
TYR 2890.0094
GLN 2900.0094
TYR 2910.0257
CYS 2970.0139
ASN 2980.0080
PRO 2990.0085
GLY 3000.0118
LYS 3010.0162
LYS 3020.0119
ASN 3030.0116
THR 3040.0120
ILE 3050.0126
SER 3060.0121
GLY 3070.0125
TYR 3080.0115
LYS 3090.0103
ARG 3100.0094
MET 3110.0091
MET 3120.0073
ALA 3130.0078
THR 3140.0054
LYS 3150.0039
ASP 3160.0036
SER 3170.0046
PHE 3180.0039
GLN 3190.0031
SER 3200.0039
PHE 3210.0056
ASN 3220.0076
LEU 3230.0121
THR 3240.0152
GLU 3250.0191
PRO 3260.0191
HIS 3270.0255
ILE 3280.0261
THR 3290.0301
THR 3300.0319
ASN 3310.0326
LYS 3320.0322
LEU 3330.0265
GLU 3340.0257
TRP 3350.0211
ILE 3360.0201
ASP 3370.0141
PRO 3380.0147
ASP 3390.0099
GLY 3400.0102
ASN 3410.0044
THR 3420.0069
ARG 3430.0097
GLY 3440.0182
GLY 3450.0305
GLY 3460.0326
GLY 10.0090
SER 20.0081
HIS 30.0066
SER 40.0054
MET 50.0041
ARG 60.0035
TYR 70.0030
PHE 80.0035
PHE 90.0041
THR 100.0051
SER 110.0059
VAL 120.0064
SER 130.0069
ARG 140.0074
PRO 150.0079
GLY 160.0081
ARG 170.0073
GLY 180.0072
GLU 190.0073
PRO 200.0069
ARG 210.0071
PHE 220.0058
ILE 230.0048
ALA 240.0036
VAL 250.0029
GLY 260.0029
TYR 270.0030
VAL 280.0040
ASP 290.0044
ASP 300.0035
THR 310.0031
GLN 320.0027
PHE 330.0034
VAL 340.0035
ARG 350.0039
PHE 360.0049
ASP 370.0060
SER 380.0069
ASP 390.0081
ALA 400.0079
ALA 410.0097
SER 420.0089
GLN 430.0082
ARG 440.0072
MET 450.0058
GLU 460.0055
PRO 470.0052
ARG 480.0042
ALA 490.0045
PRO 500.0060
TRP 510.0065
ILE 520.0062
GLU 530.0073
GLN 540.0086
GLU 550.0082
GLY 560.0096
PRO 570.0098
GLU 580.0093
TYR 590.0076
TRP 600.0074
ASP 610.0079
GLY 620.0066
GLU 630.0055
THR 640.0063
ARG 650.0061
LYS 660.0044
VAL 670.0045
LYS 680.0057
ALA 690.0048
HIS 700.0042
SER 710.0053
GLN 720.0057
THR 730.0055
HIS 740.0057
ARG 750.0066
VAL 760.0067
ASP 770.0066
LEU 780.0069
GLY 790.0073
THR 800.0073
LEU 810.0071
ARG 820.0067
GLY 830.0069
TYR 840.0071
TYR 850.0068
ASN 860.0051
GLN 870.0055
SER 880.0050
GLU 890.0060
ALA 900.0058
GLY 910.0079
SER 920.0074
HIS 930.0070
THR 940.0065
VAL 950.0060
GLN 960.0053
ARG 970.0046
MET 980.0041
TYR 990.0039
GLY 1000.0040
CYS 1010.0051
ASP 1020.0064
VAL 1030.0073
GLY 1040.0090
SER 1050.0100
ASP 1060.0103
TRP 1070.0085
ARG 1080.0082
PHE 1090.0071
LEU 1100.0080
ARG 1110.0067
GLY 1120.0056
TYR 1130.0054
HIS 1140.0051
GLN 1150.0058
TYR 1160.0055
ALA 1170.0059
TYR 1180.0064
ASP 1190.0066
GLY 1200.0062
LYS 1210.0062
ASP 1220.0062
TYR 1230.0064
ILE 1240.0062
ALA 1250.0059
LEU 1260.0063
LYS 1270.0072
GLU 1280.0072
ASP 1290.0075
LEU 1300.0066
ARG 1310.0074
SER 1320.0076
TRP 1330.0072
THR 1340.0073
ALA 1350.0074
ALA 1360.0066
ASP 1370.0066
MET 1380.0066
ALA 1390.0065
ALA 1400.0066
GLN 1410.0079
THR 1420.0079
THR 1430.0071
LYS 1440.0076
HIS 1450.0083
LYS 1460.0079
TRP 1470.0071
GLU 1480.0080
ALA 1490.0082
ALA 1500.0072
HIS 1510.0070
VAL 1520.0059
ALA 1530.0063
GLU 1540.0059
GLN 1550.0044
LEU 1560.0044
ARG 1570.0051
ALA 1580.0038
TYR 1590.0031
LEU 1600.0044
GLU 1610.0054
GLY 1620.0047
THR 1630.0040
CYS 1640.0043
VAL 1650.0057
GLU 1660.0065
TRP 1670.0058
LEU 1680.0057
ARG 1690.0071
ARG 1700.0071
TYR 1710.0063
LEU 1720.0068
GLU 1730.0082
ASN 1740.0078
GLY 1750.0067
LYS 1760.0074
GLU 1770.0066
THR 1780.0049
LEU 1790.0052
GLN 1800.0067
ARG 1810.0043
THR 1820.0044
ASP 1830.0041
ALA 1840.0043
PRO 1850.0042
LYS 1860.0040
THR 1870.0034
HIS 1880.0032
MET 1890.0032
THR 1900.0036
HIS 1910.0041
HIS 1920.0058
ALA 1930.0070
VAL 1940.0085
SER 1950.0098
ASP 1960.0107
HIS 1970.0098
GLU 1980.0080
ALA 1990.0062
THR 2000.0051
LEU 2010.0034
ARG 2020.0033
CYS 2030.0029
TRP 2040.0035
ALA 2050.0040
LEU 2060.0040
SER 2070.0039
PHE 2080.0042
TYR 2090.0042
PRO 2100.0043
ALA 2110.0046
GLU 2120.0047
ILE 2130.0042
THR 2140.0040
LEU 2150.0035
THR 2160.0030
TRP 2170.0025
GLN 2180.0031
ARG 2190.0039
ASP 2200.0051
GLY 2210.0046
GLU 2220.0040
ASP 2230.0028
GLN 2240.0020
THR 2250.0021
GLN 2260.0017
ASP 2270.0017
THR 2280.0018
GLU 2290.0027
LEU 2300.0035
VAL 2310.0044
GLU 2320.0043
THR 2330.0042
ARG 2340.0038
PRO 2350.0036
ALA 2360.0035
GLY 2370.0036
ASP 2380.0035
GLY 2390.0037
THR 2400.0038
PHE 2410.0041
GLN 2420.0038
LYS 2430.0037
TRP 2440.0035
ALA 2450.0033
ALA 2460.0034
VAL 2470.0033
VAL 2480.0048
VAL 2490.0051
PRO 2500.0068
SER 2510.0075
GLY 2520.0076
GLN 2530.0064
GLU 2540.0053
GLN 2550.0057
ARG 2560.0050
TYR 2570.0038
THR 2580.0033
CYS 2590.0027
HIS 2600.0034
VAL 2610.0035
GLN 2620.0040
HIS 2630.0043
GLU 2640.0048
GLY 2650.0047
LEU 2660.0046
PRO 2670.0054
LYS 2680.0051
PRO 2690.0044
LEU 2700.0037
THR 2710.0038
LEU 2720.0033
ARG 2730.0035
TRP 2740.0034
GLU 2750.0041
PRO 2760.0047
GLN 2780.0074
ARG 2790.0065
THR 2800.0063
PRO 2810.0055
LYS 2820.0055
ILE 2830.0046
GLN 2840.0046
VAL 2850.0046
TYR 2860.0050
SER 2870.0052
ARG 2880.0049
HIS 2890.0064
PRO 2900.0076
ALA 2910.0082
GLU 2920.0096
ASN 2930.0106
GLY 2940.0108
LYS 2950.0099
SER 2960.0085
ASN 2970.0070
PHE 2980.0052
LEU 2990.0047
ASN 3000.0038
CYS 3010.0036
TYR 3020.0035
VAL 3030.0041
SER 3040.0046
GLY 3050.0055
PHE 3060.0058
HIS 3070.0062
PRO 3080.0064
SER 3090.0054
ASP 3100.0055
ILE 3110.0049
GLU 3120.0042
VAL 3130.0032
ASP 3140.0027
LEU 3150.0033
LEU 3160.0043
LYS 3170.0055
ASN 3180.0066
GLY 3190.0057
GLU 3200.0044
ARG 3210.0031
ILE 3220.0033
GLU 3230.0023
LYS 3240.0027
VAL 3250.0017
GLU 3260.0020
HIS 3270.0018
SER 3280.0025
ASP 3290.0030
LEU 3300.0039
SER 3310.0037
PHE 3320.0045
SER 3330.0048
LYS 3340.0047
ASP 3350.0055
TRP 3360.0053
SER 3370.0059
PHE 3380.0050
TYR 3390.0040
LEU 3400.0031
LEU 3410.0024
TYR 3420.0020
TYR 3430.0027
THR 3440.0038
GLU 3450.0054
PHE 3460.0065
THR 3470.0081
PRO 3480.0086
THR 3490.0101
GLU 3500.0111
LYS 3510.0108
ASP 3520.0090
GLU 3530.0076
TYR 3540.0061
ALA 3550.0053
CYS 3560.0041
ARG 3570.0042
VAL 3580.0039
ASN 3590.0047
HIS 3600.0057
VAL 3610.0069
THR 3620.0074
LEU 3630.0067
SER 3640.0064
GLN 3650.0047
PRO 3660.0035
LYS 3670.0041
ILE 3680.0052
VAL 3690.0056
LYS 3700.0062
TRP 3710.0062
ASP 3720.0074
ARG 3730.0075
ASP 3740.0082
MET 3750.0070
SER 10.0048
GLN 20.0052
PHE 30.0048
ARG 40.0044
VAL 50.0039
SER 60.0034
PRO 70.0023
LEU 80.0019
ASP 90.0019
ARG 100.0024
THR 110.0039
TRP 120.0051
ASN 130.0068
LEU 140.0078
GLY 150.0090
GLU 160.0061
THR 170.0056
VAL 180.0041
GLU 190.0041
LEU 200.0037
LYS 210.0042
CYS 220.0044
GLN 230.0049
VAL 240.0053
LEU 250.0056
LEU 260.0053
SER 270.0056
ASN 280.0050
PRO 290.0046
THR 300.0040
SER 310.0041
GLY 320.0042
CYS 330.0042
SER 340.0042
TRP 350.0042
LEU 360.0043
PHE 370.0040
GLN 380.0042
PRO 390.0037
ARG 400.0033
GLY 410.0075
ALA 420.0086
ALA 430.0085
ALA 440.0072
SER 450.0065
PRO 460.0043
THR 470.0043
PHE 480.0043
LEU 490.0042
LEU 500.0042
TYR 510.0042
LEU 520.0045
SER 530.0043
GLN 540.0044
ASN 550.0043
LYS 560.0045
PRO 570.0044
LYS 580.0040
ALA 590.0041
ALA 600.0037
GLU 610.0034
GLY 620.0039
LEU 630.0037
ASP 640.0051
THR 650.0060
GLN 660.0069
ARG 670.0056
PHE 680.0052
SER 690.0056
GLY 700.0056
LYS 710.0054
ARG 720.0056
LEU 730.0060
GLY 740.0063
ASP 750.0057
THR 760.0054
PHE 770.0052
VAL 780.0047
LEU 790.0043
THR 800.0044
LEU 810.0053
SER 820.0057
ASP 830.0060
PHE 840.0052
ARG 850.0058
ARG 860.0044
GLU 870.0045
ASN 880.0042
GLU 890.0025
GLY 900.0020
TYR 910.0033
TYR 920.0036
PHE 930.0039
CYS 940.0044
SER 950.0049
ALA 960.0041
LEU 970.0031
SER 980.0035
ASN 990.0030
SER 1000.0019
ILE 1010.0030
MET 1020.0031
TYR 1030.0039
PHE 1040.0043
SER 1050.0053
HIS 1060.0041
PHE 1070.0034
VAL 1080.0028
PRO 1090.0022
VAL 1100.0026
PHE 1110.0030
LEU 1120.0053
PRO 1130.0074
ALA 1140.0078
SER 10.0081
GLN 20.0075
PHE 30.0058
ARG 40.0058
VAL 50.0033
SER 60.0024
PRO 70.0009
LEU 80.0034
ASP 90.0037
ARG 100.0037
THR 110.0067
TRP 120.0087
ASN 130.0122
LEU 140.0155
GLY 150.0161
GLU 160.0126
THR 170.0114
VAL 180.0082
GLU 190.0068
LEU 200.0037
LYS 210.0040
CYS 220.0036
GLN 230.0062
VAL 240.0065
LEU 250.0088
LEU 260.0074
SER 270.0096
ASN 280.0090
PRO 290.0075
THR 300.0076
SER 310.0044
GLY 320.0039
CYS 330.0026
SER 340.0019
TRP 350.0024
LEU 360.0029
PHE 370.0050
GLN 380.0067
PRO 390.0087
ARG 400.0102
GLY 410.0073
ALA 420.0060
ALA 430.0047
ALA 440.0056
SER 450.0049
PRO 460.0057
THR 470.0053
PHE 480.0040
LEU 490.0043
LEU 500.0040
TYR 510.0038
LEU 520.0053
SER 530.0059
GLN 540.0079
ASN 550.0081
LYS 560.0083
PRO 570.0066
LYS 580.0055
ALA 590.0062
ALA 600.0062
GLU 610.0079
GLY 620.0123
LEU 630.0118
ASP 640.0153
THR 650.0144
GLN 660.0177
ARG 670.0153
PHE 680.0122
SER 690.0116
GLY 700.0097
LYS 710.0096
ARG 720.0094
LEU 730.0109
GLY 740.0113
ASP 750.0093
THR 760.0076
PHE 770.0063
VAL 780.0065
LEU 790.0064
THR 800.0088
LEU 810.0113
SER 820.0140
ASP 830.0155
PHE 840.0134
ARG 850.0159
ARG 860.0164
GLU 870.0162
ASN 880.0122
GLU 890.0113
GLY 900.0096
TYR 910.0062
TYR 920.0041
PHE 930.0026
CYS 940.0012
SER 950.0017
ALA 960.0021
LEU 970.0019
SER 980.0028
ASN 990.0028
SER 1000.0028
ILE 1010.0034
MET 1020.0033
TYR 1030.0035
PHE 1040.0036
SER 1050.0037
HIS 1060.0054
PHE 1070.0051
VAL 1080.0038
PRO 1090.0060
VAL 1100.0064
PHE 1110.0097
LEU 1120.0119
PRO 1130.0120
ALA 1140.0152

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.