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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1299
MET 10.0003
SER 20.0003
THR 30.0002
ILE 40.0002
THR 50.0001
LYS 60.0002
ASP 70.0002
GLN 80.0002
ILE 90.0002
LEU 100.0002
GLU 110.0002
GLY 120.0002
VAL 130.0002
ALA 140.0002
ALA 150.0003
LEU 160.0004
SER 170.0003
VAL 180.0002
MET 190.0004
GLU 200.0004
ILE 210.0003
VAL 220.0004
GLU 230.0006
LEU 240.0005
ILE 250.0005
SER 260.0006
ALA 270.0007
MET 280.0006
GLU 290.0007
GLU 300.0010
LYS 310.0010
PHE 320.0008
GLY 330.0010
VAL 340.0007
SER 350.0007
ALA 360.0013
ALA 370.0004
ALA 380.0013
VAL 390.0021
ALA 400.0024
ALA 410.0035
GLY 420.0055
PRO 430.0058
ALA 440.0074
ALA 450.0057
ALA 460.0048
VAL 470.0066
GLU 480.0089
ALA 490.0086
ALA 500.0085
GLU 510.0074
GLU 520.0071
GLN 530.0058
THR 540.0057
GLU 550.0044
PHE 560.0046
ASP 570.0048
VAL 580.0049
VAL 590.0056
LEU 600.0060
ALA 610.0074
SER 620.0078
PHE 630.0073
GLY 640.0086
GLU 650.0093
ASN 660.0084
LYS 670.0073
VAL 680.0067
ALA 690.0069
VAL 700.0063
ILE 710.0051
LYS 720.0052
ALA 730.0053
VAL 740.0044
ARG 750.0034
GLY 760.0038
ALA 770.0035
THR 780.0025
GLY 790.0018
LEU 800.0017
GLY 810.0016
LEU 820.0027
LYS 830.0026
GLU 840.0027
ALA 850.0034
LYS 860.0039
ASP 870.0040
LEU 880.0044
VAL 890.0051
GLU 900.0054
SER 910.0056
ALA 920.0058
PRO 930.0060
ALA 940.0055
VAL 950.0052
LEU 960.0043
LYS 970.0038
GLU 980.0042
GLY 990.0041
VAL 1000.0036
ASN 1010.0037
LYS 1020.0044
ASP 1030.0039
GLU 1040.0034
ALA 1050.0043
GLU 1060.0050
THR 1070.0045
LEU 1080.0046
LYS 1090.0057
LYS 1100.0060
SER 1110.0059
LEU 1120.0062
GLU 1130.0075
GLU 1140.0077
ALA 1150.0074
GLY 1160.0080
ALA 1170.0072
SER 1180.0076
VAL 1190.0066
GLU 1200.0068
ILE 1210.0044
LYS 1220.0046
GLU 1230.0045
ALA 1240.0041
ALA 1250.0047
ALA 1260.0008
LYS 1270.0014
ALA 1280.0015
TYR 1290.0025
LYS 1300.0032
ILE 1310.0065
ILE 1320.0080
SER 1330.0096
LEU 1340.0107
LYS 1350.0125
TYR 1360.0117
THR 1370.0116
ARG 1380.0107
LYS 1390.0107
VAL 1400.0094
CYS 1410.0073
ILE 1420.0056
GLY 1430.0077
PRO 1440.0068
GLY 1450.0085
PRO 1460.0130
GLY 1470.0117
LYS 1480.0078
ALA 1490.0057
TYR 1500.0052
LYS 1510.0074
ILE 1520.0087
ILE 1530.0090
SER 1540.0102
LEU 1550.0106
LYS 1560.0117
TYR 1570.0104
THR 1580.0102
ARG 1590.0089
LYS 1600.0088
VAL 1610.0067
CYS 1620.0068
GLY 1630.0048
PRO 1640.0058
GLY 1650.0095
PRO 1660.0132
GLY 1670.0128
GLY 1680.0095
LYS 1690.0069
ALA 1700.0035
TYR 1710.0047
LYS 1720.0049
ILE 1730.0073
ILE 1740.0082
SER 1750.0106
LEU 1760.0105
LYS 1770.0107
TYR 1780.0098
THR 1790.0102
ARG 1800.0094
LYS 1810.0096
VAL 1820.0079
GLY 1830.0084
PRO 1840.0081
GLY 1850.0099
PRO 1860.0080
GLY 1870.0077
ILE 1880.0092
ILE 1890.0087
SER 1900.0103
LEU 1910.0108
LYS 1920.0112
TYR 1930.0105
THR 1940.0107
ARG 1950.0101
LYS 1960.0091
VAL 1970.0073
CYS 1980.0052
ILE 1990.0047
GLN 2000.0027
LEU 2010.0019
GLY 2020.0021
GLY 2030.0016
PRO 2040.0013
GLY 2050.0017
PRO 2060.0006
GLY 2070.0007
ASN 2080.0008
ILE 2090.0007
LYS 2100.0008
THR 2110.0005
ALA 2120.0005
PHE 2130.0006
HIS 2140.0005
CYS 2150.0004
TYR 2160.0016
ALA 2170.0014
ALA 2180.0009
TYR 2190.0007
MET 2200.0006
THR 2210.0011
SER 2220.0014
ILE 2230.0015
LYS 2240.0016
ALA 2250.0016
CYS 2260.0067
ASP 2270.0307
LEU 2280.0277
LYS 2290.0577
LYS 2300.0550
PRO 2310.0460
LEU 2320.0450
MET 2330.0279
GLU 2340.0322
SER 2350.0292
GLY 2360.0159
TRP 2370.0168
SER 2380.0292
ASP 2390.0377
THR 2400.0521
ALA 2410.0647
HIS 2420.0536
GLY 2430.0281
LYS 2440.0451
LYS 2450.0871
SER 2460.0999
LEU 2470.0511
PRO 2480.0636
SER 2490.0999
SER 2500.1299
SER 2510.0246
SER 2520.0144
TYR 2530.0116
SER 2540.0132
TYR 2550.0149
ARG 2560.0169
ARG 2570.0139
LYS 2580.0119
LEU 2590.0080
THR 2600.0089
ASN 2610.0120
PRO 2620.0194
ALA 2630.0320
ASN 2640.0320
LYS 2650.0297
GLU 2660.0212
GLU 2670.0160
SER 2680.0126
ILE 2690.0079
LYS 2700.0080
LYS 2710.0118
GLN 2720.0135
LYS 2730.0143
TYR 2740.0168
SER 2750.0178
TYR 2760.0327
PRO 2770.0278
TRP 2780.0327
GLN 2790.0287
THR 2800.0196
SER 2810.0174
LYS 2820.0172
CYS 2830.0187
PHE 2840.0395
ASP 2880.0204
TYR 2890.0095
GLN 2900.0070
TYR 2910.0035
CYS 2970.0091
ASN 2980.0068
PRO 2990.0025
GLY 3000.0031
LYS 3010.0026
LYS 3020.0040
ASN 3030.0043
THR 3040.0038
ILE 3050.0050
SER 3060.0058
GLY 3070.0058
TYR 3080.0057
LYS 3090.0054
ARG 3100.0053
MET 3110.0055
MET 3120.0046
ALA 3130.0051
THR 3140.0043
LYS 3150.0034
ASP 3160.0028
SER 3170.0022
PHE 3180.0025
GLN 3190.0028
SER 3200.0027
PHE 3210.0043
ASN 3220.0030
LEU 3230.0022
THR 3240.0010
GLU 3250.0035
PRO 3260.0050
HIS 3270.0106
ILE 3280.0144
THR 3290.0193
THR 3300.0236
ASN 3310.0235
LYS 3320.0174
LEU 3330.0127
GLU 3340.0093
TRP 3350.0046
ILE 3360.0031
ASP 3370.0039
PRO 3380.0037
ASP 3390.0041
GLY 3400.0047
ASN 3410.0053
THR 3420.0035
ARG 3430.0092
GLY 3440.0149
GLY 3450.0163
GLY 3460.0267
GLY 10.0037
SER 20.0031
HIS 30.0024
SER 40.0018
MET 50.0011
ARG 60.0007
TYR 70.0002
PHE 80.0004
PHE 90.0006
THR 100.0008
SER 110.0012
VAL 120.0012
SER 130.0015
ARG 140.0019
PRO 150.0019
GLY 160.0024
ARG 170.0028
GLY 180.0031
GLU 190.0029
PRO 200.0024
ARG 210.0023
PHE 220.0020
ILE 230.0017
ALA 240.0013
VAL 250.0012
GLY 260.0012
TYR 270.0014
VAL 280.0017
ASP 290.0020
ASP 300.0022
THR 310.0025
GLN 320.0022
PHE 330.0020
VAL 340.0020
ARG 350.0023
PHE 360.0027
ASP 370.0030
SER 380.0034
ASP 390.0040
ALA 400.0045
ALA 410.0059
SER 420.0056
GLN 430.0049
ARG 440.0044
MET 450.0033
GLU 460.0035
PRO 470.0032
ARG 480.0033
ALA 490.0033
PRO 500.0038
TRP 510.0031
ILE 520.0027
GLU 530.0036
GLN 540.0034
GLU 550.0028
GLY 560.0036
PRO 570.0045
GLU 580.0042
TYR 590.0031
TRP 600.0037
ASP 610.0045
GLY 620.0038
GLU 630.0030
THR 640.0038
ARG 650.0042
LYS 660.0032
VAL 670.0027
LYS 680.0035
ALA 690.0035
HIS 700.0025
SER 710.0024
GLN 720.0029
THR 730.0026
HIS 740.0019
ARG 750.0023
VAL 760.0024
ASP 770.0019
LEU 780.0016
GLY 790.0021
THR 800.0022
LEU 810.0014
ARG 820.0014
GLY 830.0020
TYR 840.0020
TYR 850.0017
ASN 860.0018
GLN 870.0010
SER 880.0008
GLU 890.0010
ALA 900.0008
GLY 910.0008
SER 920.0009
HIS 930.0005
THR 940.0005
VAL 950.0006
GLN 960.0004
ARG 970.0006
MET 980.0006
TYR 990.0010
GLY 1000.0011
CYS 1010.0018
ASP 1020.0024
VAL 1030.0027
GLY 1040.0034
SER 1050.0037
ASP 1060.0037
TRP 1070.0029
ARG 1080.0030
PHE 1090.0030
LEU 1100.0035
ARG 1110.0030
GLY 1120.0024
TYR 1130.0021
HIS 1140.0017
GLN 1150.0015
TYR 1160.0010
ALA 1170.0007
TYR 1180.0006
ASP 1190.0004
GLY 1200.0006
LYS 1210.0007
ASP 1220.0011
TYR 1230.0013
ILE 1240.0017
ALA 1250.0019
LEU 1260.0026
LYS 1270.0031
GLU 1280.0034
ASP 1290.0039
LEU 1300.0034
ARG 1310.0042
SER 1320.0038
TRP 1330.0031
THR 1340.0027
ALA 1350.0023
ALA 1360.0018
ASP 1370.0016
MET 1380.0017
ALA 1390.0017
ALA 1400.0018
GLN 1410.0026
THR 1420.0028
THR 1430.0026
LYS 1440.0029
HIS 1450.0036
LYS 1460.0037
TRP 1470.0035
GLU 1480.0042
ALA 1490.0047
ALA 1500.0044
HIS 1510.0046
VAL 1520.0037
ALA 1530.0036
GLU 1540.0042
GLN 1550.0037
LEU 1560.0029
ARG 1570.0033
ALA 1580.0033
TYR 1590.0024
LEU 1600.0023
GLU 1610.0028
GLY 1620.0024
THR 1630.0017
CYS 1640.0012
VAL 1650.0017
GLU 1660.0013
TRP 1670.0005
LEU 1680.0010
ARG 1690.0015
ARG 1700.0009
TYR 1710.0014
LEU 1720.0021
GLU 1730.0022
ASN 1740.0022
GLY 1750.0027
LYS 1760.0034
GLU 1770.0038
THR 1780.0033
LEU 1790.0028
GLN 1800.0033
ARG 1810.0027
THR 1820.0023
ASP 1830.0019
ALA 1840.0016
PRO 1850.0013
LYS 1860.0010
THR 1870.0009
HIS 1880.0009
MET 1890.0012
THR 1900.0014
HIS 1910.0016
HIS 1920.0021
ALA 1930.0028
VAL 1940.0031
SER 1950.0038
ASP 1960.0043
HIS 1970.0041
GLU 1980.0033
ALA 1990.0027
THR 2000.0020
LEU 2010.0016
ARG 2020.0012
CYS 2030.0010
TRP 2040.0009
ALA 2050.0011
LEU 2060.0011
SER 2070.0013
PHE 2080.0014
TYR 2090.0017
PRO 2100.0019
ALA 2110.0015
GLU 2120.0016
ILE 2130.0014
THR 2140.0015
LEU 2150.0013
THR 2160.0015
TRP 2170.0016
GLN 2180.0021
ARG 2190.0026
ASP 2200.0030
GLY 2210.0028
GLU 2220.0024
ASP 2230.0018
GLN 2240.0016
THR 2250.0013
GLN 2260.0012
ASP 2270.0013
THR 2280.0011
GLU 2290.0010
LEU 2300.0009
VAL 2310.0011
GLU 2320.0011
THR 2330.0011
ARG 2340.0011
PRO 2350.0012
ALA 2360.0011
GLY 2370.0013
ASP 2380.0013
GLY 2390.0013
THR 2400.0012
PHE 2410.0013
GLN 2420.0010
LYS 2430.0009
TRP 2440.0008
ALA 2450.0009
ALA 2460.0011
VAL 2470.0016
VAL 2480.0022
VAL 2490.0026
PRO 2500.0034
SER 2510.0035
GLY 2520.0037
GLN 2530.0034
GLU 2540.0028
GLN 2550.0030
ARG 2560.0030
TYR 2570.0024
THR 2580.0021
CYS 2590.0017
HIS 2600.0019
VAL 2610.0015
GLN 2620.0018
HIS 2630.0018
GLU 2640.0022
GLY 2650.0019
LEU 2660.0020
PRO 2670.0025
LYS 2680.0025
PRO 2690.0023
LEU 2700.0019
THR 2710.0023
LEU 2720.0019
ARG 2730.0022
TRP 2740.0021
GLU 2750.0025
PRO 2760.0028
GLN 2780.0022
ARG 2790.0020
THR 2800.0024
PRO 2810.0022
LYS 2820.0025
ILE 2830.0020
GLN 2840.0016
VAL 2850.0014
TYR 2860.0010
SER 2870.0005
ARG 2880.0005
HIS 2890.0007
PRO 2900.0009
ALA 2910.0008
GLU 2920.0010
ASN 2930.0008
GLY 2940.0010
LYS 2950.0011
SER 2960.0009
ASN 2970.0005
PHE 2980.0005
LEU 2990.0008
ASN 3000.0009
CYS 3010.0013
TYR 3020.0013
VAL 3030.0017
SER 3040.0015
GLY 3050.0016
PHE 3060.0016
HIS 3070.0014
PRO 3080.0015
SER 3090.0013
ASP 3100.0017
ILE 3110.0020
GLU 3120.0024
VAL 3130.0024
ASP 3140.0023
LEU 3150.0019
LEU 3160.0021
LYS 3170.0019
ASN 3180.0023
GLY 3190.0028
GLU 3200.0029
ARG 3210.0028
ILE 3220.0023
GLU 3230.0026
LYS 3240.0023
VAL 3250.0018
GLU 3260.0015
HIS 3270.0014
SER 3280.0021
ASP 3290.0017
LEU 3300.0013
SER 3310.0010
PHE 3320.0010
SER 3330.0007
LYS 3340.0008
ASP 3350.0009
TRP 3360.0007
SER 3370.0008
PHE 3380.0012
TYR 3390.0012
LEU 3400.0012
LEU 3410.0012
TYR 3420.0014
TYR 3430.0011
THR 3440.0011
GLU 3450.0009
PHE 3460.0007
THR 3470.0006
PRO 3480.0002
THR 3490.0002
GLU 3500.0004
LYS 3510.0008
ASP 3520.0011
GLU 3530.0015
TYR 3540.0015
ALA 3550.0019
CYS 3560.0020
ARG 3570.0027
VAL 3580.0028
ASN 3590.0030
HIS 3600.0029
VAL 3610.0031
THR 3620.0032
LEU 3630.0043
SER 3640.0047
GLN 3650.0044
PRO 3660.0038
LYS 3670.0035
ILE 3680.0029
VAL 3690.0024
LYS 3700.0018
TRP 3710.0012
ASP 3720.0012
ARG 3730.0010
ASP 3740.0014
MET 3750.0013
SER 10.0001
GLN 20.0003
PHE 30.0002
ARG 40.0003
VAL 50.0002
SER 60.0005
PRO 70.0004
LEU 80.0003
ASP 90.0004
ARG 100.0003
THR 110.0005
TRP 120.0003
ASN 130.0005
LEU 140.0009
GLY 150.0010
GLU 160.0006
THR 170.0006
VAL 180.0005
GLU 190.0006
LEU 200.0005
LYS 210.0005
CYS 220.0004
GLN 230.0004
VAL 240.0003
LEU 250.0002
LEU 260.0006
SER 270.0008
ASN 280.0007
PRO 290.0005
THR 300.0005
SER 310.0007
GLY 320.0008
CYS 330.0007
SER 340.0007
TRP 350.0007
LEU 360.0009
PHE 370.0009
GLN 380.0009
PRO 390.0010
ARG 400.0010
GLY 410.0018
ALA 420.0018
ALA 430.0017
ALA 440.0016
SER 450.0014
PRO 460.0012
THR 470.0012
PHE 480.0012
LEU 490.0012
LEU 500.0011
TYR 510.0010
LEU 520.0010
SER 530.0010
GLN 540.0010
ASN 550.0011
LYS 560.0013
PRO 570.0012
LYS 580.0014
ALA 590.0014
ALA 600.0015
GLU 610.0016
GLY 620.0017
LEU 630.0015
ASP 640.0015
THR 650.0015
GLN 660.0015
ARG 670.0013
PHE 680.0012
SER 690.0012
GLY 700.0011
LYS 710.0007
ARG 720.0007
LEU 730.0006
GLY 740.0007
ASP 750.0006
THR 760.0006
PHE 770.0007
VAL 780.0006
LEU 790.0007
THR 800.0007
LEU 810.0010
SER 820.0011
ASP 830.0011
PHE 840.0010
ARG 850.0012
ARG 860.0016
GLU 870.0017
ASN 880.0013
GLU 890.0010
GLY 900.0008
TYR 910.0006
TYR 920.0006
PHE 930.0006
CYS 940.0006
SER 950.0006
ALA 960.0006
LEU 970.0007
SER 980.0008
ASN 990.0009
SER 1000.0010
ILE 1010.0008
MET 1020.0007
TYR 1030.0005
PHE 1040.0004
SER 1050.0003
HIS 1060.0003
PHE 1070.0003
VAL 1080.0003
PRO 1090.0003
VAL 1100.0004
PHE 1110.0005
LEU 1120.0008
PRO 1130.0011
ALA 1140.0015
SER 10.0032
GLN 20.0033
PHE 30.0030
ARG 40.0032
VAL 50.0026
SER 60.0027
PRO 70.0025
LEU 80.0029
ASP 90.0031
ARG 100.0025
THR 110.0022
TRP 120.0015
ASN 130.0016
LEU 140.0015
GLY 150.0010
GLU 160.0003
THR 170.0004
VAL 180.0006
GLU 190.0013
LEU 200.0017
LYS 210.0022
CYS 220.0025
GLN 230.0031
VAL 240.0031
LEU 250.0037
LEU 260.0034
SER 270.0039
ASN 280.0038
PRO 290.0034
THR 300.0033
SER 310.0025
GLY 320.0022
CYS 330.0019
SER 340.0014
TRP 350.0012
LEU 360.0007
PHE 370.0005
GLN 380.0008
PRO 390.0012
ARG 400.0018
GLY 410.0013
ALA 420.0007
ALA 430.0003
ALA 440.0006
SER 450.0003
PRO 460.0005
THR 470.0001
PHE 480.0005
LEU 490.0008
LEU 500.0012
TYR 510.0017
LEU 520.0022
SER 530.0026
GLN 540.0031
ASN 550.0030
LYS 560.0028
PRO 570.0023
LYS 580.0018
ALA 590.0014
ALA 600.0009
GLU 610.0009
GLY 620.0016
LEU 630.0014
ASP 640.0019
THR 650.0021
GLN 660.0025
ARG 670.0017
PHE 680.0014
SER 690.0019
GLY 700.0022
LYS 710.0026
ARG 720.0030
LEU 730.0034
GLY 740.0038
ASP 750.0035
THR 760.0031
PHE 770.0025
VAL 780.0021
LEU 790.0015
THR 800.0013
LEU 810.0008
SER 820.0009
ASP 830.0010
PHE 840.0008
ARG 850.0016
ARG 860.0021
GLU 870.0020
ASN 880.0011
GLU 890.0015
GLY 900.0015
TYR 910.0012
TYR 920.0010
PHE 930.0013
CYS 940.0016
SER 950.0017
ALA 960.0019
LEU 970.0018
SER 980.0020
ASN 990.0019
SER 1000.0015
ILE 1010.0017
MET 1020.0015
TYR 1030.0018
PHE 1040.0017
SER 1050.0020
HIS 1060.0023
PHE 1070.0019
VAL 1080.0018
PRO 1090.0019
VAL 1100.0015
PHE 1110.0020
LEU 1120.0024
PRO 1130.0031
ALA 1140.0039

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.