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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0378
MET 10.0052
SER 20.0036
THR 30.0052
ILE 40.0032
THR 50.0095
LYS 60.0102
ASP 70.0095
GLN 80.0045
ILE 90.0035
LEU 100.0050
GLU 110.0009
GLY 120.0023
VAL 130.0047
ALA 140.0049
ALA 150.0067
LEU 160.0084
SER 170.0101
VAL 180.0101
MET 190.0080
GLU 200.0060
ILE 210.0062
VAL 220.0050
GLU 230.0024
LEU 240.0032
ILE 250.0052
SER 260.0050
ALA 270.0038
MET 280.0053
GLU 290.0066
GLU 300.0051
LYS 310.0055
PHE 320.0084
GLY 330.0091
VAL 340.0113
SER 350.0113
ALA 360.0145
ALA 370.0154
ALA 380.0112
VAL 390.0131
ALA 400.0171
ALA 410.0130
GLY 420.0118
PRO 430.0107
ALA 440.0144
ALA 450.0134
ALA 460.0131
VAL 470.0187
GLU 480.0220
ALA 490.0215
ALA 500.0247
GLU 510.0244
GLU 520.0244
GLN 530.0204
THR 540.0204
GLU 550.0164
PHE 560.0159
ASP 570.0157
VAL 580.0148
VAL 590.0178
LEU 600.0193
ALA 610.0261
SER 620.0282
PHE 630.0273
GLY 640.0330
GLU 650.0377
ASN 660.0342
LYS 670.0301
VAL 680.0294
ALA 690.0276
VAL 700.0230
ILE 710.0201
LYS 720.0208
ALA 730.0180
VAL 740.0138
ARG 750.0131
GLY 760.0143
ALA 770.0102
THR 780.0076
GLY 790.0098
LEU 800.0087
GLY 810.0113
LEU 820.0151
LYS 830.0131
GLU 840.0091
ALA 850.0118
LYS 860.0152
ASP 870.0141
LEU 880.0141
VAL 890.0180
GLU 900.0208
SER 910.0200
ALA 920.0210
PRO 930.0217
ALA 940.0188
VAL 950.0169
LEU 960.0132
LYS 970.0119
GLU 980.0137
GLY 990.0148
VAL 1000.0129
ASN 1010.0147
LYS 1020.0152
ASP 1030.0133
GLU 1040.0115
ALA 1050.0123
GLU 1060.0122
THR 1070.0102
LEU 1080.0114
LYS 1090.0146
LYS 1100.0146
SER 1110.0158
LEU 1120.0184
GLU 1130.0223
GLU 1140.0233
ALA 1150.0251
GLY 1160.0270
ALA 1170.0239
SER 1180.0247
VAL 1190.0201
GLU 1200.0212
ILE 1210.0138
LYS 1220.0153
GLU 1230.0160
ALA 1240.0147
ALA 1250.0165
ALA 1260.0078
LYS 1270.0063
ALA 1280.0067
TYR 1290.0061
LYS 1300.0071
ILE 1310.0054
ILE 1320.0042
SER 1330.0016
LEU 1340.0020
LYS 1350.0026
TYR 1360.0076
THR 1370.0080
ARG 1380.0086
LYS 1390.0089
VAL 1400.0094
CYS 1410.0093
ILE 1420.0070
GLY 1430.0068
PRO 1440.0050
GLY 1450.0046
PRO 1460.0064
GLY 1470.0098
LYS 1480.0092
ALA 1490.0098
TYR 1500.0063
LYS 1510.0057
ILE 1520.0065
ILE 1530.0053
SER 1540.0070
LEU 1550.0064
LYS 1560.0060
TYR 1570.0060
THR 1580.0052
ARG 1590.0054
LYS 1600.0048
VAL 1610.0051
CYS 1620.0047
GLY 1630.0067
PRO 1640.0071
GLY 1650.0066
PRO 1660.0095
GLY 1670.0074
GLY 1680.0083
LYS 1690.0059
ALA 1700.0061
TYR 1710.0051
LYS 1720.0054
ILE 1730.0049
ILE 1740.0055
SER 1750.0053
LEU 1760.0055
LYS 1770.0061
TYR 1780.0054
THR 1790.0068
ARG 1800.0068
LYS 1810.0101
VAL 1820.0107
GLY 1830.0131
PRO 1840.0132
GLY 1850.0121
PRO 1860.0087
GLY 1870.0074
ILE 1880.0087
ILE 1890.0074
SER 1900.0091
LEU 1910.0080
LYS 1920.0064
TYR 1930.0059
THR 1940.0044
ARG 1950.0046
LYS 1960.0026
VAL 1970.0033
CYS 1980.0036
ILE 1990.0050
GLN 2000.0054
LEU 2010.0071
GLY 2020.0059
GLY 2030.0047
PRO 2040.0046
GLY 2050.0052
PRO 2060.0067
GLY 2070.0070
ASN 2080.0075
ILE 2090.0074
LYS 2100.0073
THR 2110.0059
ALA 2120.0054
PHE 2130.0050
HIS 2140.0044
CYS 2150.0037
TYR 2160.0026
ALA 2170.0021
ALA 2180.0018
TYR 2190.0020
MET 2200.0034
THR 2210.0044
SER 2220.0054
ILE 2230.0065
LYS 2240.0079
ALA 2250.0091
CYS 2260.0083
ASP 2270.0067
LEU 2280.0055
LYS 2290.0066
LYS 2300.0099
PRO 2310.0117
LEU 2320.0107
MET 2330.0060
GLU 2340.0056
SER 2350.0048
GLY 2360.0023
TRP 2370.0061
SER 2380.0103
ASP 2390.0144
THR 2400.0181
ALA 2410.0257
HIS 2420.0082
GLY 2430.0160
LYS 2440.0093
LYS 2450.0223
SER 2460.0274
LEU 2470.0127
PRO 2480.0160
SER 2490.0316
SER 2500.0378
SER 2510.0066
SER 2520.0055
TYR 2530.0063
SER 2540.0060
TYR 2550.0076
ARG 2560.0080
ARG 2570.0088
LYS 2580.0047
LEU 2590.0054
THR 2600.0019
ASN 2610.0040
PRO 2620.0031
ALA 2630.0096
ASN 2640.0095
LYS 2650.0105
GLU 2660.0063
GLU 2670.0063
SER 2680.0021
ILE 2690.0057
LYS 2700.0045
LYS 2710.0050
GLN 2720.0033
LYS 2730.0020
TYR 2740.0008
SER 2750.0021
TYR 2760.0145
PRO 2770.0114
TRP 2780.0197
GLN 2790.0173
THR 2800.0068
SER 2810.0075
LYS 2820.0039
CYS 2830.0065
PHE 2840.0175
ASP 2880.0082
TYR 2890.0040
GLN 2900.0030
TYR 2910.0016
CYS 2970.0105
ASN 2980.0155
PRO 2990.0101
GLY 3000.0185
LYS 3010.0064
LYS 3020.0134
ASN 3030.0151
THR 3040.0150
ILE 3050.0183
SER 3060.0256
GLY 3070.0247
TYR 3080.0249
LYS 3090.0200
ARG 3100.0171
MET 3110.0195
MET 3120.0154
ALA 3130.0146
THR 3140.0099
LYS 3150.0085
ASP 3160.0072
SER 3170.0091
PHE 3180.0093
GLN 3190.0103
SER 3200.0073
PHE 3210.0094
ASN 3220.0071
LEU 3230.0072
THR 3240.0070
GLU 3250.0078
PRO 3260.0085
HIS 3270.0128
ILE 3280.0158
THR 3290.0185
THR 3300.0215
ASN 3310.0200
LYS 3320.0162
LEU 3330.0133
GLU 3340.0107
TRP 3350.0078
ILE 3360.0044
ASP 3370.0059
PRO 3380.0059
ASP 3390.0075
GLY 3400.0083
ASN 3410.0098
THR 3420.0083
ARG 3430.0109
GLY 3440.0100
GLY 3450.0078
GLY 3460.0177
GLY 10.0227
SER 20.0195
HIS 30.0154
SER 40.0120
MET 50.0078
ARG 60.0058
TYR 70.0028
PHE 80.0025
PHE 90.0036
THR 100.0040
SER 110.0062
VAL 120.0052
SER 130.0076
ARG 140.0080
PRO 150.0095
GLY 160.0114
ARG 170.0119
GLY 180.0140
GLU 190.0139
PRO 200.0110
ARG 210.0093
PHE 220.0079
ILE 230.0057
ALA 240.0042
VAL 250.0035
GLY 260.0052
TYR 270.0073
VAL 280.0100
ASP 290.0111
ASP 300.0105
THR 310.0125
GLN 320.0098
PHE 330.0097
VAL 340.0085
ARG 350.0088
PHE 360.0102
ASP 370.0112
SER 380.0137
ASP 390.0152
ALA 400.0174
ALA 410.0245
SER 420.0234
GLN 430.0208
ARG 440.0180
MET 450.0133
GLU 460.0148
PRO 470.0143
ARG 480.0149
ALA 490.0163
PRO 500.0194
TRP 510.0176
ILE 520.0140
GLU 530.0181
GLN 540.0184
GLU 550.0142
GLY 560.0160
PRO 570.0189
GLU 580.0163
TYR 590.0121
TRP 600.0151
ASP 610.0180
GLY 620.0144
GLU 630.0113
THR 640.0154
ARG 650.0173
LYS 660.0130
VAL 670.0109
LYS 680.0152
ALA 690.0162
HIS 700.0121
SER 710.0109
GLN 720.0143
THR 730.0142
HIS 740.0112
ARG 750.0129
VAL 760.0142
ASP 770.0127
LEU 780.0112
GLY 790.0138
THR 800.0149
LEU 810.0115
ARG 820.0107
GLY 830.0131
TYR 840.0134
TYR 850.0115
ASN 860.0091
GLN 870.0072
SER 880.0064
GLU 890.0071
ALA 900.0051
GLY 910.0052
SER 920.0049
HIS 930.0056
THR 940.0053
VAL 950.0067
GLN 960.0057
ARG 970.0069
MET 980.0067
TYR 990.0084
GLY 1000.0089
CYS 1010.0124
ASP 1020.0156
VAL 1030.0171
GLY 1040.0213
SER 1050.0230
ASP 1060.0226
TRP 1070.0181
ARG 1080.0181
PHE 1090.0178
LEU 1100.0215
ARG 1110.0192
GLY 1120.0159
TYR 1130.0145
HIS 1140.0125
GLN 1150.0119
TYR 1160.0097
ALA 1170.0084
TYR 1180.0077
ASP 1190.0055
GLY 1200.0059
LYS 1210.0075
ASP 1220.0101
TYR 1230.0109
ILE 1240.0133
ALA 1250.0144
LEU 1260.0178
LYS 1270.0213
GLU 1280.0226
ASP 1290.0255
LEU 1300.0223
ARG 1310.0268
SER 1320.0252
TRP 1330.0210
THR 1340.0192
ALA 1350.0169
ALA 1360.0136
ASP 1370.0117
MET 1380.0123
ALA 1390.0118
ALA 1400.0132
GLN 1410.0187
THR 1420.0195
THR 1430.0179
LYS 1440.0205
HIS 1450.0242
LYS 1460.0243
TRP 1470.0230
GLU 1480.0273
ALA 1490.0299
ALA 1500.0276
HIS 1510.0284
VAL 1520.0226
ALA 1530.0229
GLU 1540.0255
GLN 1550.0215
LEU 1560.0172
ARG 1570.0201
ALA 1580.0185
TYR 1590.0130
LEU 1600.0139
GLU 1610.0163
GLY 1620.0125
THR 1630.0078
CYS 1640.0074
VAL 1650.0107
GLU 1660.0075
TRP 1670.0048
LEU 1680.0087
ARG 1690.0115
ARG 1700.0093
TYR 1710.0108
LEU 1720.0146
GLU 1730.0166
ASN 1740.0160
GLY 1750.0174
LYS 1760.0210
GLU 1770.0223
THR 1780.0183
LEU 1790.0160
GLN 1800.0195
ARG 1810.0124
THR 1820.0103
ASP 1830.0080
ALA 1840.0066
PRO 1850.0041
LYS 1860.0019
THR 1870.0021
HIS 1880.0024
MET 1890.0033
THR 1900.0036
HIS 1910.0046
HIS 1920.0055
ALA 1930.0078
VAL 1940.0079
SER 1950.0103
ASP 1960.0120
HIS 1970.0115
GLU 1980.0094
ALA 1990.0078
THR 2000.0058
LEU 2010.0046
ARG 2020.0030
CYS 2030.0028
TRP 2040.0015
ALA 2050.0019
LEU 2060.0018
SER 2070.0038
PHE 2080.0047
TYR 2090.0066
PRO 2100.0075
ALA 2110.0049
GLU 2120.0055
ILE 2130.0046
THR 2140.0049
LEU 2150.0042
THR 2160.0046
TRP 2170.0053
GLN 2180.0068
ARG 2190.0079
ASP 2200.0093
GLY 2210.0086
GLU 2220.0071
ASP 2230.0055
GLN 2240.0049
THR 2250.0039
GLN 2260.0035
ASP 2270.0042
THR 2280.0035
GLU 2290.0033
LEU 2300.0026
VAL 2310.0025
GLU 2320.0028
THR 2330.0025
ARG 2340.0024
PRO 2350.0024
ALA 2360.0030
GLY 2370.0028
ASP 2380.0031
GLY 2390.0026
THR 2400.0029
PHE 2410.0030
GLN 2420.0017
LYS 2430.0012
TRP 2440.0008
ALA 2450.0018
ALA 2460.0031
VAL 2470.0049
VAL 2480.0065
VAL 2490.0079
PRO 2500.0099
SER 2510.0105
GLY 2520.0112
GLN 2530.0103
GLU 2540.0090
GLN 2550.0097
ARG 2560.0095
TYR 2570.0078
THR 2580.0072
CYS 2590.0057
HIS 2600.0060
VAL 2610.0051
GLN 2620.0067
HIS 2630.0067
GLU 2640.0088
GLY 2650.0075
LEU 2660.0073
PRO 2670.0090
LYS 2680.0089
PRO 2690.0084
LEU 2700.0064
THR 2710.0076
LEU 2720.0067
ARG 2730.0077
TRP 2740.0073
GLU 2750.0088
PRO 2760.0099
GLN 2780.0094
ARG 2790.0085
THR 2800.0091
PRO 2810.0084
LYS 2820.0098
ILE 2830.0082
GLN 2840.0066
VAL 2850.0069
TYR 2860.0054
SER 2870.0051
ARG 2880.0038
HIS 2890.0046
PRO 2900.0052
ALA 2910.0069
GLU 2920.0088
ASN 2930.0117
GLY 2940.0137
LYS 2950.0120
SER 2960.0114
ASN 2970.0087
PHE 2980.0068
LEU 2990.0071
ASN 3000.0056
CYS 3010.0062
TYR 3020.0050
VAL 3030.0062
SER 3040.0060
GLY 3050.0070
PHE 3060.0063
HIS 3070.0053
PRO 3080.0058
SER 3090.0035
ASP 3100.0041
ILE 3110.0058
GLU 3120.0075
VAL 3130.0095
ASP 3140.0110
LEU 3150.0109
LEU 3160.0137
LYS 3170.0153
ASN 3180.0181
GLY 3190.0184
GLU 3200.0185
ARG 3210.0162
ILE 3220.0145
GLU 3230.0148
LYS 3240.0125
VAL 3250.0096
GLU 3260.0068
HIS 3270.0045
SER 3280.0071
ASP 3290.0054
LEU 3300.0031
SER 3310.0025
PHE 3320.0037
SER 3330.0053
LYS 3340.0062
ASP 3350.0064
TRP 3360.0055
SER 3370.0052
PHE 3380.0040
TYR 3390.0038
LEU 3400.0035
LEU 3410.0043
TYR 3420.0055
TYR 3430.0064
THR 3440.0085
GLU 3450.0097
PHE 3460.0111
THR 3470.0124
PRO 3480.0118
THR 3490.0139
GLU 3500.0137
LYS 3510.0162
ASP 3520.0155
GLU 3530.0142
TYR 3540.0121
ALA 3550.0117
CYS 3560.0106
ARG 3570.0128
VAL 3580.0112
ASN 3590.0113
HIS 3600.0106
VAL 3610.0113
THR 3620.0128
LEU 3630.0167
SER 3640.0185
GLN 3650.0178
PRO 3660.0164
LYS 3670.0161
ILE 3680.0150
VAL 3690.0122
LYS 3700.0112
TRP 3710.0088
ASP 3720.0071
ARG 3730.0048
ASP 3740.0035
MET 3750.0023
SER 10.0032
GLN 20.0041
PHE 30.0038
ARG 40.0036
VAL 50.0029
SER 60.0040
PRO 70.0024
LEU 80.0020
ASP 90.0019
ARG 100.0014
THR 110.0033
TRP 120.0041
ASN 130.0054
LEU 140.0065
GLY 150.0064
GLU 160.0044
THR 170.0036
VAL 180.0030
GLU 190.0026
LEU 200.0028
LYS 210.0038
CYS 220.0037
GLN 230.0042
VAL 240.0042
LEU 250.0042
LEU 260.0024
SER 270.0031
ASN 280.0030
PRO 290.0021
THR 300.0027
SER 310.0044
GLY 320.0045
CYS 330.0043
SER 340.0042
TRP 350.0041
LEU 360.0046
PHE 370.0045
GLN 380.0045
PRO 390.0046
ARG 400.0045
GLY 410.0046
ALA 420.0046
ALA 430.0045
ALA 440.0047
SER 450.0048
PRO 460.0049
THR 470.0054
PHE 480.0055
LEU 490.0053
LEU 500.0054
TYR 510.0051
LEU 520.0051
SER 530.0054
GLN 540.0057
ASN 550.0059
LYS 560.0066
PRO 570.0060
LYS 580.0066
ALA 590.0063
ALA 600.0069
GLU 610.0087
GLY 620.0089
LEU 630.0075
ASP 640.0075
THR 650.0072
GLN 660.0069
ARG 670.0059
PHE 680.0056
SER 690.0054
GLY 700.0051
LYS 710.0042
ARG 720.0046
LEU 730.0045
GLY 740.0053
ASP 750.0050
THR 760.0045
PHE 770.0043
VAL 780.0034
LEU 790.0035
THR 800.0032
LEU 810.0047
SER 820.0049
ASP 830.0056
PHE 840.0054
ARG 850.0066
ARG 860.0067
GLU 870.0070
ASN 880.0058
GLU 890.0050
GLY 900.0041
TYR 910.0030
TYR 920.0032
PHE 930.0033
CYS 940.0039
SER 950.0048
ALA 960.0032
LEU 970.0035
SER 980.0036
ASN 990.0039
SER 1000.0040
ILE 1010.0042
MET 1020.0040
TYR 1030.0036
PHE 1040.0033
SER 1050.0030
HIS 1060.0034
PHE 1070.0026
VAL 1080.0019
PRO 1090.0018
VAL 1100.0029
PHE 1110.0048
LEU 1120.0056
PRO 1130.0056
ALA 1140.0063
SER 10.0093
GLN 20.0098
PHE 30.0093
ARG 40.0098
VAL 50.0087
SER 60.0095
PRO 70.0095
LEU 80.0100
ASP 90.0112
ARG 100.0102
THR 110.0097
TRP 120.0085
ASN 130.0088
LEU 140.0079
GLY 150.0066
GLU 160.0066
THR 170.0056
VAL 180.0058
GLU 190.0064
LEU 200.0068
LYS 210.0077
CYS 220.0082
GLN 230.0095
VAL 240.0095
LEU 250.0107
LEU 260.0102
SER 270.0118
ASN 280.0114
PRO 290.0099
THR 300.0096
SER 310.0076
GLY 320.0070
CYS 330.0062
SER 340.0050
TRP 350.0045
LEU 360.0037
PHE 370.0031
GLN 380.0030
PRO 390.0034
ARG 400.0043
GLY 410.0026
ALA 420.0024
ALA 430.0031
ALA 440.0026
SER 450.0031
PRO 460.0025
THR 470.0025
PHE 480.0032
LEU 490.0032
LEU 500.0041
TYR 510.0052
LEU 520.0061
SER 530.0071
GLN 540.0082
ASN 550.0079
LYS 560.0076
PRO 570.0063
LYS 580.0054
ALA 590.0043
ALA 600.0031
GLU 610.0030
GLY 620.0031
LEU 630.0025
ASP 640.0026
THR 650.0035
GLN 660.0032
ARG 670.0027
PHE 680.0031
SER 690.0045
GLY 700.0058
LYS 710.0069
ARG 720.0081
LEU 730.0092
GLY 740.0104
ASP 750.0099
THR 760.0090
PHE 770.0076
VAL 780.0067
LEU 790.0053
THR 800.0047
LEU 810.0038
SER 820.0038
ASP 830.0046
PHE 840.0053
ARG 850.0060
ARG 860.0074
GLU 870.0059
ASN 880.0044
GLU 890.0056
GLY 900.0047
TYR 910.0046
TYR 920.0046
PHE 930.0052
CYS 940.0057
SER 950.0061
ALA 960.0067
LEU 970.0067
SER 980.0072
ASN 990.0072
SER 1000.0064
ILE 1010.0071
MET 1020.0063
TYR 1030.0067
PHE 1040.0061
SER 1050.0068
HIS 1060.0072
PHE 1070.0063
VAL 1080.0068
PRO 1090.0069
VAL 1100.0065
PHE 1110.0076
LEU 1120.0093
PRO 1130.0117
ALA 1140.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.