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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1034
MET 10.0008
SER 20.0004
THR 30.0005
ILE 40.0003
THR 50.0004
LYS 60.0003
ASP 70.0004
GLN 80.0005
ILE 90.0004
LEU 100.0003
GLU 110.0005
GLY 120.0006
VAL 130.0005
ALA 140.0005
ALA 150.0007
LEU 160.0009
SER 170.0010
VAL 180.0010
MET 190.0011
GLU 200.0010
ILE 210.0008
VAL 220.0009
GLU 230.0009
LEU 240.0007
ILE 250.0007
SER 260.0006
ALA 270.0006
MET 280.0006
GLU 290.0006
GLU 300.0006
LYS 310.0007
PHE 320.0007
GLY 330.0007
VAL 340.0007
SER 350.0005
ALA 360.0010
ALA 370.0012
ALA 380.0019
VAL 390.0025
ALA 400.0032
ALA 410.0043
GLY 420.0060
PRO 430.0060
ALA 440.0079
ALA 450.0063
ALA 460.0053
VAL 470.0073
GLU 480.0101
ALA 490.0099
ALA 500.0098
GLU 510.0085
GLU 520.0082
GLN 530.0069
THR 540.0068
GLU 550.0055
PHE 560.0054
ASP 570.0055
VAL 580.0052
VAL 590.0061
LEU 600.0062
ALA 610.0084
SER 620.0086
PHE 630.0078
GLY 640.0095
GLU 650.0104
ASN 660.0092
LYS 670.0075
VAL 680.0069
ALA 690.0072
VAL 700.0061
ILE 710.0045
LYS 720.0049
ALA 730.0049
VAL 740.0033
ARG 750.0023
GLY 760.0033
ALA 770.0022
THR 780.0008
GLY 790.0017
LEU 800.0011
GLY 810.0016
LEU 820.0017
LYS 830.0010
GLU 840.0019
ALA 850.0021
LYS 860.0032
ASP 870.0037
LEU 880.0043
VAL 890.0051
GLU 900.0057
SER 910.0064
ALA 920.0067
PRO 930.0072
ALA 940.0062
VAL 950.0057
LEU 960.0041
LYS 970.0038
GLU 980.0049
GLY 990.0050
VAL 1000.0039
ASN 1010.0040
LYS 1020.0048
ASP 1030.0038
GLU 1040.0031
ALA 1050.0042
GLU 1060.0049
THR 1070.0040
LEU 1080.0039
LYS 1090.0055
LYS 1100.0060
SER 1110.0057
LEU 1120.0061
GLU 1130.0078
GLU 1140.0082
ALA 1150.0077
GLY 1160.0084
ALA 1170.0074
SER 1180.0081
VAL 1190.0069
GLU 1200.0074
ILE 1210.0047
LYS 1220.0051
GLU 1230.0054
ALA 1240.0050
ALA 1250.0056
ALA 1260.0024
LYS 1270.0018
ALA 1280.0013
TYR 1290.0012
LYS 1300.0010
ILE 1310.0025
ILE 1320.0028
SER 1330.0028
LEU 1340.0032
LYS 1350.0034
TYR 1360.0054
THR 1370.0055
ARG 1380.0062
LYS 1390.0064
VAL 1400.0070
CYS 1410.0076
ILE 1420.0079
GLY 1430.0096
PRO 1440.0098
GLY 1450.0117
PRO 1460.0127
GLY 1470.0125
LYS 1480.0113
ALA 1490.0096
TYR 1500.0086
LYS 1510.0077
ILE 1520.0070
ILE 1530.0063
SER 1540.0056
LEU 1550.0050
LYS 1560.0043
TYR 1570.0039
THR 1580.0035
ARG 1590.0032
LYS 1600.0029
VAL 1610.0028
CYS 1620.0025
GLY 1630.0027
PRO 1640.0024
GLY 1650.0022
PRO 1660.0024
GLY 1670.0022
GLY 1680.0023
LYS 1690.0021
ALA 1700.0023
TYR 1710.0021
LYS 1720.0024
ILE 1730.0025
ILE 1740.0028
SER 1750.0030
LEU 1760.0034
LYS 1770.0038
TYR 1780.0047
THR 1790.0053
ARG 1800.0062
LYS 1810.0072
VAL 1820.0079
GLY 1830.0087
PRO 1840.0095
GLY 1850.0095
PRO 1860.0090
GLY 1870.0079
ILE 1880.0074
ILE 1890.0066
SER 1900.0060
LEU 1910.0050
LYS 1920.0045
TYR 1930.0043
THR 1940.0039
ARG 1950.0038
LYS 1960.0021
VAL 1970.0018
CYS 1980.0020
ILE 1990.0019
GLN 2000.0023
LEU 2010.0009
GLY 2020.0015
GLY 2030.0019
PRO 2040.0017
GLY 2050.0018
PRO 2060.0013
GLY 2070.0015
ASN 2080.0013
ILE 2090.0011
LYS 2100.0015
THR 2110.0009
ALA 2120.0007
PHE 2130.0008
HIS 2140.0008
CYS 2150.0006
TYR 2160.0002
ALA 2170.0008
ALA 2180.0004
TYR 2190.0010
MET 2200.0014
THR 2210.0019
SER 2220.0020
ILE 2230.0023
LYS 2240.0027
ALA 2250.0032
CYS 2260.0055
ASP 2270.0341
LEU 2280.0203
LYS 2290.0485
LYS 2300.0347
PRO 2310.0189
LEU 2320.0389
MET 2330.0152
GLU 2340.0376
SER 2350.0336
GLY 2360.0078
TRP 2370.0210
SER 2380.0296
ASP 2390.0447
THR 2400.0548
ALA 2410.1034
HIS 2420.0465
GLY 2430.0518
LYS 2440.0212
LYS 2450.0333
SER 2460.0439
LEU 2470.0226
PRO 2480.0219
SER 2490.0511
SER 2500.0541
SER 2510.0111
SER 2520.0111
TYR 2530.0193
SER 2540.0280
TYR 2550.0381
ARG 2560.0399
ARG 2570.0411
LYS 2580.0253
LEU 2590.0224
THR 2600.0111
ASN 2610.0149
PRO 2620.0184
ALA 2630.0522
ASN 2640.0538
LYS 2650.0554
GLU 2660.0343
GLU 2670.0289
SER 2680.0129
ILE 2690.0205
LYS 2700.0161
LYS 2710.0199
GLN 2720.0179
LYS 2730.0127
TYR 2740.0140
SER 2750.0134
TYR 2760.0374
PRO 2770.0242
TRP 2780.0483
GLN 2790.0421
THR 2800.0137
SER 2810.0243
LYS 2820.0134
CYS 2830.0113
PHE 2840.0313
ASP 2880.0169
TYR 2890.0081
GLN 2900.0076
TYR 2910.0060
CYS 2970.0049
ASN 2980.0024
PRO 2990.0034
GLY 3000.0042
LYS 3010.0054
LYS 3020.0032
ASN 3030.0039
THR 3040.0056
ILE 3050.0051
SER 3060.0055
GLY 3070.0042
TYR 3080.0041
LYS 3090.0035
ARG 3100.0020
MET 3110.0016
MET 3120.0010
ALA 3130.0009
THR 3140.0010
LYS 3150.0011
ASP 3160.0020
SER 3170.0026
PHE 3180.0025
GLN 3190.0018
SER 3200.0027
PHE 3210.0037
ASN 3220.0038
LEU 3230.0038
THR 3240.0036
GLU 3250.0031
PRO 3260.0036
HIS 3270.0048
ILE 3280.0069
THR 3290.0095
THR 3300.0121
ASN 3310.0129
LYS 3320.0105
LEU 3330.0082
GLU 3340.0074
TRP 3350.0061
ILE 3360.0069
ASP 3370.0060
PRO 3380.0058
ASP 3390.0043
GLY 3400.0045
ASN 3410.0033
THR 3420.0037
ARG 3430.0054
GLY 3440.0105
GLY 3450.0147
GLY 3460.0191
GLY 10.0058
SER 20.0049
HIS 30.0038
SER 40.0029
MET 50.0018
ARG 60.0013
TYR 70.0005
PHE 80.0008
PHE 90.0008
THR 100.0012
SER 110.0019
VAL 120.0022
SER 130.0027
ARG 140.0036
PRO 150.0038
GLY 160.0048
ARG 170.0052
GLY 180.0055
GLU 190.0049
PRO 200.0039
ARG 210.0036
PHE 220.0030
ILE 230.0026
ALA 240.0019
VAL 250.0019
GLY 260.0019
TYR 270.0023
VAL 280.0028
ASP 290.0032
ASP 300.0035
THR 310.0040
GLN 320.0034
PHE 330.0032
VAL 340.0031
ARG 350.0034
PHE 360.0040
ASP 370.0046
SER 380.0051
ASP 390.0061
ALA 400.0068
ALA 410.0089
SER 420.0084
GLN 430.0074
ARG 440.0065
MET 450.0049
GLU 460.0052
PRO 470.0048
ARG 480.0050
ALA 490.0051
PRO 500.0059
TRP 510.0049
ILE 520.0041
GLU 530.0055
GLN 540.0053
GLU 550.0043
GLY 560.0054
PRO 570.0067
GLU 580.0062
TYR 590.0047
TRP 600.0055
ASP 610.0067
GLY 620.0056
GLU 630.0044
THR 640.0056
ARG 650.0062
LYS 660.0047
VAL 670.0039
LYS 680.0052
ALA 690.0052
HIS 700.0036
SER 710.0036
GLN 720.0044
THR 730.0039
HIS 740.0029
ARG 750.0036
VAL 760.0040
ASP 770.0031
LEU 780.0028
GLY 790.0036
THR 800.0035
LEU 810.0023
ARG 820.0024
GLY 830.0029
TYR 840.0025
TYR 850.0018
ASN 860.0015
GLN 870.0015
SER 880.0021
GLU 890.0028
ALA 900.0028
GLY 910.0025
SER 920.0023
HIS 930.0016
THR 940.0011
VAL 950.0009
GLN 960.0003
ARG 970.0007
MET 980.0009
TYR 990.0016
GLY 1000.0019
CYS 1010.0030
ASP 1020.0039
VAL 1030.0043
GLY 1040.0054
SER 1050.0057
ASP 1060.0056
TRP 1070.0044
ARG 1080.0046
PHE 1090.0047
LEU 1100.0056
ARG 1110.0050
GLY 1120.0040
TYR 1130.0034
HIS 1140.0026
GLN 1150.0022
TYR 1160.0014
ALA 1170.0007
TYR 1180.0004
ASP 1190.0007
GLY 1200.0012
LYS 1210.0012
ASP 1220.0016
TYR 1230.0015
ILE 1240.0025
ALA 1250.0030
LEU 1260.0042
LYS 1270.0053
GLU 1280.0059
ASP 1290.0069
LEU 1300.0058
ARG 1310.0072
SER 1320.0066
TRP 1330.0051
THR 1340.0044
ALA 1350.0035
ALA 1360.0027
ASP 1370.0019
MET 1380.0022
ALA 1390.0021
ALA 1400.0024
GLN 1410.0041
THR 1420.0046
THR 1430.0042
LYS 1440.0049
HIS 1450.0061
LYS 1460.0064
TRP 1470.0060
GLU 1480.0073
ALA 1490.0083
ALA 1500.0078
HIS 1510.0080
VAL 1520.0062
ALA 1530.0061
GLU 1540.0072
GLN 1550.0063
LEU 1560.0047
ARG 1570.0055
ALA 1580.0055
TYR 1590.0038
LEU 1600.0036
GLU 1610.0046
GLY 1620.0038
THR 1630.0026
CYS 1640.0018
VAL 1650.0026
GLU 1660.0018
TRP 1670.0005
LEU 1680.0016
ARG 1690.0022
ARG 1700.0014
TYR 1710.0022
LEU 1720.0033
GLU 1730.0035
ASN 1740.0035
GLY 1750.0043
LYS 1760.0053
GLU 1770.0059
THR 1780.0051
LEU 1790.0043
GLN 1800.0051
ARG 1810.0037
THR 1820.0031
ASP 1830.0022
ALA 1840.0019
PRO 1850.0012
LYS 1860.0008
THR 1870.0014
HIS 1880.0021
MET 1890.0027
THR 1900.0031
HIS 1910.0040
HIS 1920.0048
ALA 1930.0060
VAL 1940.0060
SER 1950.0074
ASP 1960.0089
HIS 1970.0080
GLU 1980.0063
ALA 1990.0055
THR 2000.0040
LEU 2010.0033
ARG 2020.0024
CYS 2030.0019
TRP 2040.0012
ALA 2050.0008
LEU 2060.0005
SER 2070.0009
PHE 2080.0013
TYR 2090.0021
PRO 2100.0026
ALA 2110.0020
GLU 2120.0023
ILE 2130.0019
THR 2140.0021
LEU 2150.0018
THR 2160.0022
TRP 2170.0027
GLN 2180.0037
ARG 2190.0045
ASP 2200.0056
GLY 2210.0048
GLU 2220.0038
ASP 2230.0026
GLN 2240.0018
THR 2250.0014
GLN 2260.0010
ASP 2270.0012
THR 2280.0011
GLU 2290.0011
LEU 2300.0011
VAL 2310.0009
GLU 2320.0013
THR 2330.0011
ARG 2340.0011
PRO 2350.0011
ALA 2360.0010
GLY 2370.0015
ASP 2380.0014
GLY 2390.0014
THR 2400.0010
PHE 2410.0011
GLN 2420.0006
LYS 2430.0004
TRP 2440.0007
ALA 2450.0010
ALA 2460.0017
VAL 2470.0026
VAL 2480.0038
VAL 2490.0048
PRO 2500.0061
SER 2510.0071
GLY 2520.0076
GLN 2530.0067
GLU 2540.0060
GLN 2550.0066
ARG 2560.0059
TYR 2570.0047
THR 2580.0043
CYS 2590.0032
HIS 2600.0033
VAL 2610.0023
GLN 2620.0028
HIS 2630.0026
GLU 2640.0031
GLY 2650.0025
LEU 2660.0030
PRO 2670.0039
LYS 2680.0044
PRO 2690.0042
LEU 2700.0035
THR 2710.0046
LEU 2720.0042
ARG 2730.0051
TRP 2740.0050
GLU 2750.0062
PRO 2760.0070
GLN 2780.0038
ARG 2790.0032
THR 2800.0033
PRO 2810.0028
LYS 2820.0027
ILE 2830.0018
GLN 2840.0011
VAL 2850.0009
TYR 2860.0006
SER 2870.0011
ARG 2880.0012
HIS 2890.0018
PRO 2900.0022
ALA 2910.0025
GLU 2920.0034
ASN 2930.0035
GLY 2940.0041
LYS 2950.0039
SER 2960.0035
ASN 2970.0026
PHE 2980.0018
LEU 2990.0014
ASN 3000.0011
CYS 3010.0013
TYR 3020.0013
VAL 3030.0021
SER 3040.0020
GLY 3050.0023
PHE 3060.0025
HIS 3070.0025
PRO 3080.0028
SER 3090.0023
ASP 3100.0028
ILE 3110.0029
GLU 3120.0032
VAL 3130.0031
ASP 3140.0030
LEU 3150.0024
LEU 3160.0025
LYS 3170.0026
ASN 3180.0027
GLY 3190.0030
GLU 3200.0038
ARG 3210.0039
ILE 3220.0037
GLU 3230.0044
LYS 3240.0042
VAL 3250.0030
GLU 3260.0026
HIS 3270.0020
SER 3280.0030
ASP 3290.0025
LEU 3300.0021
SER 3310.0019
PHE 3320.0018
SER 3330.0017
LYS 3340.0019
ASP 3350.0020
TRP 3360.0015
SER 3370.0020
PHE 3380.0021
TYR 3390.0018
LEU 3400.0017
LEU 3410.0015
TYR 3420.0018
TYR 3430.0018
THR 3440.0024
GLU 3450.0027
PHE 3460.0028
THR 3470.0032
PRO 3480.0028
THR 3490.0033
GLU 3500.0030
LYS 3510.0026
ASP 3520.0024
GLU 3530.0016
TYR 3540.0015
ALA 3550.0015
CYS 3560.0020
ARG 3570.0029
VAL 3580.0032
ASN 3590.0039
HIS 3600.0039
VAL 3610.0045
THR 3620.0045
LEU 3630.0051
SER 3640.0057
GLN 3650.0052
PRO 3660.0045
LYS 3670.0038
ILE 3680.0027
VAL 3690.0017
LYS 3700.0009
TRP 3710.0007
ASP 3720.0010
ARG 3730.0023
ASP 3740.0024
MET 3750.0021
SER 10.0014
GLN 20.0016
PHE 30.0016
ARG 40.0015
VAL 50.0014
SER 60.0014
PRO 70.0013
LEU 80.0009
ASP 90.0011
ARG 100.0014
THR 110.0016
TRP 120.0020
ASN 130.0026
LEU 140.0029
GLY 150.0032
GLU 160.0026
THR 170.0024
VAL 180.0019
GLU 190.0018
LEU 200.0014
LYS 210.0018
CYS 220.0017
GLN 230.0018
VAL 240.0020
LEU 250.0018
LEU 260.0022
SER 270.0023
ASN 280.0018
PRO 290.0016
THR 300.0012
SER 310.0014
GLY 320.0013
CYS 330.0011
SER 340.0010
TRP 350.0009
LEU 360.0007
PHE 370.0005
GLN 380.0005
PRO 390.0006
ARG 400.0008
GLY 410.0015
ALA 420.0019
ALA 430.0019
ALA 440.0015
SER 450.0014
PRO 460.0008
THR 470.0007
PHE 480.0007
LEU 490.0006
LEU 500.0009
TYR 510.0010
LEU 520.0010
SER 530.0010
GLN 540.0009
ASN 550.0009
LYS 560.0013
PRO 570.0011
LYS 580.0009
ALA 590.0008
ALA 600.0007
GLU 610.0005
GLY 620.0005
LEU 630.0008
ASP 640.0016
THR 650.0019
GLN 660.0025
ARG 670.0022
PHE 680.0018
SER 690.0019
GLY 700.0018
LYS 710.0019
ARG 720.0021
LEU 730.0024
GLY 740.0026
ASP 750.0022
THR 760.0021
PHE 770.0018
VAL 780.0018
LEU 790.0015
THR 800.0018
LEU 810.0021
SER 820.0024
ASP 830.0025
PHE 840.0022
ARG 850.0023
ARG 860.0022
GLU 870.0020
ASN 880.0018
GLU 890.0014
GLY 900.0008
TYR 910.0005
TYR 920.0007
PHE 930.0008
CYS 940.0011
SER 950.0013
ALA 960.0013
LEU 970.0012
SER 980.0014
ASN 990.0015
SER 1000.0013
ILE 1010.0015
MET 1020.0013
TYR 1030.0013
PHE 1040.0012
SER 1050.0013
HIS 1060.0007
PHE 1070.0005
VAL 1080.0008
PRO 1090.0007
VAL 1100.0010
PHE 1110.0014
LEU 1120.0020
PRO 1130.0023
ALA 1140.0024
SER 10.0032
GLN 20.0032
PHE 30.0032
ARG 40.0036
VAL 50.0031
SER 60.0035
PRO 70.0035
LEU 80.0036
ASP 90.0041
ARG 100.0035
THR 110.0031
TRP 120.0023
ASN 130.0020
LEU 140.0014
GLY 150.0010
GLU 160.0016
THR 170.0018
VAL 180.0019
GLU 190.0024
LEU 200.0024
LYS 210.0028
CYS 220.0029
GLN 230.0034
VAL 240.0033
LEU 250.0038
LEU 260.0034
SER 270.0039
ASN 280.0037
PRO 290.0033
THR 300.0032
SER 310.0024
GLY 320.0023
CYS 330.0019
SER 340.0015
TRP 350.0013
LEU 360.0011
PHE 370.0010
GLN 380.0011
PRO 390.0014
ARG 400.0019
GLY 410.0012
ALA 420.0005
ALA 430.0002
ALA 440.0006
SER 450.0006
PRO 460.0010
THR 470.0010
PHE 480.0011
LEU 490.0012
LEU 500.0015
TYR 510.0016
LEU 520.0020
SER 530.0025
GLN 540.0032
ASN 550.0032
LYS 560.0031
PRO 570.0025
LYS 580.0021
ALA 590.0021
ALA 600.0020
GLU 610.0022
GLY 620.0026
LEU 630.0021
ASP 640.0024
THR 650.0024
GLN 660.0028
ARG 670.0020
PHE 680.0018
SER 690.0022
GLY 700.0024
LYS 710.0029
ARG 720.0032
LEU 730.0037
GLY 740.0041
ASP 750.0037
THR 760.0034
PHE 770.0028
VAL 780.0026
LEU 790.0020
THR 800.0020
LEU 810.0015
SER 820.0016
ASP 830.0011
PHE 840.0009
ARG 850.0011
ARG 860.0018
GLU 870.0016
ASN 880.0010
GLU 890.0017
GLY 900.0018
TYR 910.0016
TYR 920.0015
PHE 930.0016
CYS 940.0017
SER 950.0016
ALA 960.0018
LEU 970.0018
SER 980.0019
ASN 990.0018
SER 1000.0014
ILE 1010.0014
MET 1020.0013
TYR 1030.0016
PHE 1040.0016
SER 1050.0021
HIS 1060.0025
PHE 1070.0022
VAL 1080.0024
PRO 1090.0024
VAL 1100.0021
PHE 1110.0024
LEU 1120.0027
PRO 1130.0036
ALA 1140.0042

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.