CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0542
MET 10.0075
SER 20.0052
THR 30.0064
ILE 40.0044
THR 50.0116
LYS 60.0124
ASP 70.0115
GLN 80.0054
ILE 90.0045
LEU 100.0066
GLU 110.0012
GLY 120.0026
VAL 130.0060
ALA 140.0070
ALA 150.0085
LEU 160.0106
SER 170.0127
VAL 180.0123
MET 190.0088
GLU 200.0061
ILE 210.0065
VAL 220.0051
GLU 230.0020
LEU 240.0025
ILE 250.0063
SER 260.0082
ALA 270.0059
MET 280.0048
GLU 290.0083
GLU 300.0079
LYS 310.0047
PHE 320.0069
GLY 330.0090
VAL 340.0123
SER 350.0140
ALA 360.0221
ALA 370.0159
ALA 380.0047
VAL 390.0167
ALA 400.0186
ALA 410.0101
GLY 420.0253
PRO 430.0312
ALA 440.0321
ALA 450.0185
ALA 460.0126
VAL 470.0144
GLU 480.0258
ALA 490.0303
ALA 500.0289
GLU 510.0255
GLU 520.0229
GLN 530.0191
THR 540.0177
GLU 550.0139
PHE 560.0142
ASP 570.0133
VAL 580.0120
VAL 590.0139
LEU 600.0127
ALA 610.0168
SER 620.0156
PHE 630.0116
GLY 640.0137
GLU 650.0125
ASN 660.0091
LYS 670.0061
VAL 680.0051
ALA 690.0082
VAL 700.0067
ILE 710.0047
LYS 720.0083
ALA 730.0089
VAL 740.0051
ARG 750.0079
GLY 760.0107
ALA 770.0079
THR 780.0063
GLY 790.0110
LEU 800.0114
GLY 810.0147
LEU 820.0127
LYS 830.0148
GLU 840.0133
ALA 850.0079
LYS 860.0091
ASP 870.0125
LEU 880.0108
VAL 890.0095
GLU 900.0127
SER 910.0141
ALA 920.0140
PRO 930.0152
ALA 940.0140
VAL 950.0133
LEU 960.0081
LYS 970.0074
GLU 980.0103
GLY 990.0101
VAL 1000.0090
ASN 1010.0124
LYS 1020.0174
ASP 1030.0181
GLU 1040.0130
ALA 1050.0133
GLU 1060.0184
THR 1070.0169
LEU 1080.0120
LYS 1090.0152
LYS 1100.0184
SER 1110.0153
LEU 1120.0122
GLU 1130.0173
GLU 1140.0183
ALA 1150.0131
GLY 1160.0142
ALA 1170.0127
SER 1180.0171
VAL 1190.0159
GLU 1200.0191
ILE 1210.0148
LYS 1220.0159
GLU 1230.0161
ALA 1240.0144
ALA 1250.0170
ALA 1260.0147
LYS 1270.0150
ALA 1280.0127
TYR 1290.0141
LYS 1300.0120
ILE 1310.0117
ILE 1320.0113
SER 1330.0118
LEU 1340.0123
LYS 1350.0143
TYR 1360.0155
THR 1370.0152
ARG 1380.0148
LYS 1390.0144
VAL 1400.0142
CYS 1410.0118
ILE 1420.0123
GLY 1430.0078
PRO 1440.0105
GLY 1450.0119
PRO 1460.0191
GLY 1470.0228
LYS 1480.0211
ALA 1490.0162
TYR 1500.0142
LYS 1510.0135
ILE 1520.0129
ILE 1530.0152
SER 1540.0152
LEU 1550.0176
LYS 1560.0167
TYR 1570.0172
THR 1580.0173
ARG 1590.0178
LYS 1600.0178
VAL 1610.0168
CYS 1620.0160
GLY 1630.0164
PRO 1640.0178
GLY 1650.0184
PRO 1660.0225
GLY 1670.0264
GLY 1680.0274
LYS 1690.0245
ALA 1700.0215
TYR 1710.0188
LYS 1720.0195
ILE 1730.0189
ILE 1740.0198
SER 1750.0193
LEU 1760.0204
LYS 1770.0191
TYR 1780.0183
THR 1790.0168
ARG 1800.0162
LYS 1810.0147
VAL 1820.0141
GLY 1830.0111
PRO 1840.0097
GLY 1850.0062
PRO 1860.0052
GLY 1870.0082
ILE 1880.0094
ILE 1890.0131
SER 1900.0142
LEU 1910.0148
LYS 1920.0146
TYR 1930.0147
THR 1940.0146
ARG 1950.0150
LYS 1960.0123
VAL 1970.0121
CYS 1980.0133
ILE 1990.0142
GLN 2000.0163
LEU 2010.0114
GLY 2020.0119
GLY 2030.0115
PRO 2040.0104
GLY 2050.0103
PRO 2060.0068
GLY 2070.0061
ASN 2080.0050
ILE 2090.0034
LYS 2100.0027
THR 2110.0015
ALA 2120.0011
PHE 2130.0010
HIS 2140.0015
CYS 2150.0018
TYR 2160.0028
ALA 2170.0020
ALA 2180.0039
TYR 2190.0051
MET 2200.0047
THR 2210.0068
SER 2220.0088
ILE 2230.0101
LYS 2240.0119
ALA 2250.0135
CYS 2260.0125
ASP 2270.0136
LEU 2280.0171
LYS 2290.0185
LYS 2300.0192
PRO 2310.0227
LEU 2320.0094
MET 2330.0115
GLU 2340.0229
SER 2350.0244
GLY 2360.0125
TRP 2370.0080
SER 2380.0033
ASP 2390.0068
THR 2400.0099
ALA 2410.0133
HIS 2420.0073
GLY 2430.0082
LYS 2440.0085
LYS 2450.0163
SER 2460.0192
LEU 2470.0127
PRO 2480.0137
SER 2490.0075
SER 2500.0123
SER 2510.0074
SER 2520.0065
TYR 2530.0055
SER 2540.0078
TYR 2550.0097
ARG 2560.0104
ARG 2570.0089
LYS 2580.0086
LEU 2590.0074
THR 2600.0077
ASN 2610.0078
PRO 2620.0104
ALA 2630.0079
ASN 2640.0052
LYS 2650.0030
GLU 2660.0044
GLU 2670.0048
SER 2680.0069
ILE 2690.0055
LYS 2700.0094
LYS 2710.0082
GLN 2720.0069
LYS 2730.0082
TYR 2740.0094
SER 2750.0124
TYR 2760.0151
PRO 2770.0044
TRP 2780.0019
GLN 2790.0100
THR 2800.0174
SER 2810.0202
LYS 2820.0179
CYS 2830.0183
PHE 2840.0202
ASP 2880.0127
TYR 2890.0069
GLN 2900.0057
TYR 2910.0162
CYS 2970.0148
ASN 2980.0148
PRO 2990.0159
GLY 3000.0200
LYS 3010.0073
LYS 3020.0158
ASN 3030.0160
THR 3040.0184
ILE 3050.0186
SER 3060.0248
GLY 3070.0231
TYR 3080.0226
LYS 3090.0176
ARG 3100.0141
MET 3110.0164
MET 3120.0122
ALA 3130.0119
THR 3140.0089
LYS 3150.0098
ASP 3160.0160
SER 3170.0174
PHE 3180.0164
GLN 3190.0194
SER 3200.0154
PHE 3210.0177
ASN 3220.0151
LEU 3230.0153
THR 3240.0147
GLU 3250.0161
PRO 3260.0181
HIS 3270.0277
ILE 3280.0373
THR 3290.0446
THR 3300.0542
ASN 3310.0513
LYS 3320.0395
LEU 3330.0315
GLU 3340.0236
TRP 3350.0156
ILE 3360.0068
ASP 3370.0102
PRO 3380.0089
ASP 3390.0116
GLY 3400.0094
ASN 3410.0128
THR 3420.0117
ARG 3430.0113
GLY 3440.0100
GLY 3450.0111
GLY 3460.0121
GLY 10.0045
SER 20.0041
HIS 30.0034
SER 40.0031
MET 50.0028
ARG 60.0030
TYR 70.0036
PHE 80.0045
PHE 90.0050
THR 100.0060
SER 110.0070
VAL 120.0085
SER 130.0096
ARG 140.0115
PRO 150.0124
GLY 160.0145
ARG 170.0140
GLY 180.0131
GLU 190.0115
PRO 200.0100
ARG 210.0094
PHE 220.0079
ILE 230.0073
ALA 240.0058
VAL 250.0052
GLY 260.0044
TYR 270.0042
VAL 280.0038
ASP 290.0043
ASP 300.0053
THR 310.0054
GLN 320.0055
PHE 330.0053
VAL 340.0058
ARG 350.0066
PHE 360.0081
ASP 370.0095
SER 380.0104
ASP 390.0121
ALA 400.0125
ALA 410.0145
SER 420.0134
GLN 430.0122
ARG 440.0109
MET 450.0088
GLU 460.0081
PRO 470.0074
ARG 480.0075
ALA 490.0069
PRO 500.0074
TRP 510.0059
ILE 520.0063
GLU 530.0081
GLN 540.0078
GLU 550.0076
GLY 560.0097
PRO 570.0113
GLU 580.0110
TYR 590.0088
TRP 600.0096
ASP 610.0111
GLY 620.0096
GLU 630.0081
THR 640.0097
ARG 650.0100
LYS 660.0078
VAL 670.0074
LYS 680.0090
ALA 690.0080
HIS 700.0063
SER 710.0075
GLN 720.0082
THR 730.0066
HIS 740.0062
ARG 750.0079
VAL 760.0075
ASP 770.0058
LEU 780.0070
GLY 790.0076
THR 800.0059
LEU 810.0050
ARG 820.0066
GLY 830.0062
TYR 840.0047
TYR 850.0059
ASN 860.0074
GLN 870.0085
SER 880.0094
GLU 890.0101
ALA 900.0109
GLY 910.0117
SER 920.0104
HIS 930.0087
THR 940.0072
VAL 950.0057
GLN 960.0050
ARG 970.0038
MET 980.0032
TYR 990.0022
GLY 1000.0019
CYS 1010.0024
ASP 1020.0031
VAL 1030.0033
GLY 1040.0043
SER 1050.0043
ASP 1060.0047
TRP 1070.0034
ARG 1080.0043
PHE 1090.0042
LEU 1100.0048
ARG 1110.0040
GLY 1120.0027
TYR 1130.0022
HIS 1140.0018
GLN 1150.0022
TYR 1160.0031
ALA 1170.0043
TYR 1180.0054
ASP 1190.0068
GLY 1200.0065
LYS 1210.0051
ASP 1220.0038
TYR 1230.0031
ILE 1240.0019
ALA 1250.0017
LEU 1260.0021
LYS 1270.0036
GLU 1280.0046
ASP 1290.0054
LEU 1300.0041
ARG 1310.0054
SER 1320.0042
TRP 1330.0024
THR 1340.0021
ALA 1350.0013
ALA 1360.0022
ASP 1370.0022
MET 1380.0016
ALA 1390.0021
ALA 1400.0018
GLN 1410.0009
THR 1420.0026
THR 1430.0026
LYS 1440.0019
HIS 1450.0035
LYS 1460.0049
TRP 1470.0045
GLU 1480.0052
ALA 1490.0068
ALA 1500.0071
HIS 1510.0071
VAL 1520.0055
ALA 1530.0048
GLU 1540.0065
GLN 1550.0063
LEU 1560.0043
ARG 1570.0048
ALA 1580.0058
TYR 1590.0045
LEU 1600.0033
GLU 1610.0045
GLY 1620.0049
THR 1630.0046
CYS 1640.0031
VAL 1650.0030
GLU 1660.0040
TRP 1670.0038
LEU 1680.0026
ARG 1690.0026
ARG 1700.0036
TYR 1710.0033
LEU 1720.0027
GLU 1730.0027
ASN 1740.0038
GLY 1750.0041
LYS 1760.0038
GLU 1770.0047
THR 1780.0049
LEU 1790.0043
GLN 1800.0043
ARG 1810.0056
THR 1820.0047
ASP 1830.0031
ALA 1840.0032
PRO 1850.0026
LYS 1860.0031
THR 1870.0052
HIS 1880.0072
MET 1890.0090
THR 1900.0104
HIS 1910.0137
HIS 1920.0150
ALA 1930.0177
VAL 1940.0170
SER 1950.0203
ASP 1960.0249
HIS 1970.0216
GLU 1980.0168
ALA 1990.0156
THR 2000.0113
LEU 2010.0107
ARG 2020.0083
CYS 2030.0068
TRP 2040.0048
ALA 2050.0027
LEU 2060.0022
SER 2070.0015
PHE 2080.0018
TYR 2090.0036
PRO 2100.0049
ALA 2110.0040
GLU 2120.0048
ILE 2130.0043
THR 2140.0050
LEU 2150.0046
THR 2160.0057
TRP 2170.0073
GLN 2180.0101
ARG 2190.0122
ASP 2200.0150
GLY 2210.0124
GLU 2220.0099
ASP 2230.0067
GLN 2240.0040
THR 2250.0028
GLN 2260.0019
ASP 2270.0013
THR 2280.0015
GLU 2290.0013
LEU 2300.0009
VAL 2310.0016
GLU 2320.0012
THR 2330.0010
ARG 2340.0016
PRO 2350.0028
ALA 2360.0046
GLY 2370.0074
ASP 2380.0074
GLY 2390.0062
THR 2400.0027
PHE 2410.0014
GLN 2420.0014
LYS 2430.0019
TRP 2440.0034
ALA 2450.0044
ALA 2460.0051
VAL 2470.0070
VAL 2480.0097
VAL 2490.0126
PRO 2500.0158
SER 2510.0194
GLY 2520.0210
GLN 2530.0185
GLU 2540.0167
GLN 2550.0184
ARG 2560.0162
TYR 2570.0130
THR 2580.0119
CYS 2590.0089
HIS 2600.0085
VAL 2610.0058
GLN 2620.0064
HIS 2630.0056
GLU 2640.0064
GLY 2650.0051
LEU 2660.0072
PRO 2670.0095
LYS 2680.0109
PRO 2690.0105
LEU 2700.0095
THR 2710.0124
LEU 2720.0120
ARG 2730.0146
TRP 2740.0148
GLU 2750.0182
PRO 2760.0204
GLN 2780.0105
ARG 2790.0085
THR 2800.0080
PRO 2810.0062
LYS 2820.0053
ILE 2830.0036
GLN 2840.0032
VAL 2850.0046
TYR 2860.0065
SER 2870.0085
ARG 2880.0088
HIS 2890.0112
PRO 2900.0131
ALA 2910.0153
GLU 2920.0190
ASN 2930.0218
GLY 2940.0233
LYS 2950.0212
SER 2960.0191
ASN 2970.0154
PHE 2980.0115
LEU 2990.0090
ASN 3000.0057
CYS 3010.0024
TYR 3020.0009
VAL 3030.0037
SER 3040.0042
GLY 3050.0055
PHE 3060.0064
HIS 3070.0076
PRO 3080.0094
SER 3090.0081
ASP 3100.0088
ILE 3110.0075
GLU 3120.0071
VAL 3130.0041
ASP 3140.0034
LEU 3150.0057
LEU 3160.0080
LYS 3170.0123
ASN 3180.0139
GLY 3190.0101
GLU 3200.0098
ARG 3210.0082
ILE 3220.0110
GLU 3230.0119
LYS 3240.0132
VAL 3250.0093
GLU 3260.0094
HIS 3270.0069
SER 3280.0056
ASP 3290.0059
LEU 3300.0062
SER 3310.0057
PHE 3320.0057
SER 3330.0045
LYS 3340.0041
ASP 3350.0050
TRP 3360.0052
SER 3370.0059
PHE 3380.0064
TYR 3390.0045
LEU 3400.0038
LEU 3410.0027
TYR 3420.0035
TYR 3430.0076
THR 3440.0107
GLU 3450.0139
PHE 3460.0151
THR 3470.0180
PRO 3480.0180
THR 3490.0222
GLU 3500.0238
LYS 3510.0240
ASP 3520.0198
GLU 3530.0156
TYR 3540.0117
ALA 3550.0079
CYS 3560.0036
ARG 3570.0022
VAL 3580.0045
ASN 3590.0074
HIS 3600.0091
VAL 3610.0121
THR 3620.0121
LEU 3630.0119
SER 3640.0133
GLN 3650.0102
PRO 3660.0071
LYS 3670.0064
ILE 3680.0058
VAL 3690.0071
LYS 3700.0097
TRP 3710.0103
ASP 3720.0130
ARG 3730.0123
ASP 3740.0132
MET 3750.0114
SER 10.0028
GLN 20.0037
PHE 30.0031
ARG 40.0023
VAL 50.0024
SER 60.0029
PRO 70.0041
LEU 80.0038
ASP 90.0057
ARG 100.0072
THR 110.0094
TRP 120.0105
ASN 130.0123
LEU 140.0137
GLY 150.0136
GLU 160.0115
THR 170.0100
VAL 180.0085
GLU 190.0067
LEU 200.0053
LYS 210.0039
CYS 220.0033
GLN 230.0032
VAL 240.0041
LEU 250.0040
LEU 260.0041
SER 270.0039
ASN 280.0036
PRO 290.0037
THR 300.0034
SER 310.0055
GLY 320.0053
CYS 330.0045
SER 340.0047
TRP 350.0045
LEU 360.0056
PHE 370.0058
GLN 380.0055
PRO 390.0064
ARG 400.0064
GLY 410.0061
ALA 420.0057
ALA 430.0046
ALA 440.0044
SER 450.0034
PRO 460.0039
THR 470.0052
PHE 480.0056
LEU 490.0063
LEU 500.0065
TYR 510.0054
LEU 520.0044
SER 530.0046
GLN 540.0048
ASN 550.0053
LYS 560.0069
PRO 570.0065
LYS 580.0073
ALA 590.0075
ALA 600.0079
GLU 610.0104
GLY 620.0118
LEU 630.0110
ASP 640.0126
THR 650.0125
GLN 660.0134
ARG 670.0119
PHE 680.0104
SER 690.0094
GLY 700.0078
LYS 710.0063
ARG 720.0058
LEU 730.0055
GLY 740.0055
ASP 750.0045
THR 760.0040
PHE 770.0049
VAL 780.0054
LEU 790.0063
THR 800.0076
LEU 810.0100
SER 820.0110
ASP 830.0125
PHE 840.0119
ARG 850.0134
ARG 860.0135
GLU 870.0135
ASN 880.0112
GLU 890.0102
GLY 900.0084
TYR 910.0050
TYR 920.0050
PHE 930.0041
CYS 940.0043
SER 950.0048
ALA 960.0037
LEU 970.0034
SER 980.0034
ASN 990.0031
SER 1000.0028
ILE 1010.0039
MET 1020.0035
TYR 1030.0030
PHE 1040.0026
SER 1050.0025
HIS 1060.0019
PHE 1070.0030
VAL 1080.0039
PRO 1090.0051
VAL 1100.0068
PHE 1110.0101
LEU 1120.0117
PRO 1130.0118
ALA 1140.0126
SER 10.0045
GLN 20.0047
PHE 30.0033
ARG 40.0023
VAL 50.0008
SER 60.0012
PRO 70.0030
LEU 80.0038
ASP 90.0057
ARG 100.0069
THR 110.0088
TRP 120.0099
ASN 130.0124
LEU 140.0139
GLY 150.0141
GLU 160.0118
THR 170.0102
VAL 180.0078
GLU 190.0062
LEU 200.0038
LYS 210.0032
CYS 220.0025
GLN 230.0037
VAL 240.0045
LEU 250.0054
LEU 260.0051
SER 270.0064
ASN 280.0066
PRO 290.0057
THR 300.0061
SER 310.0047
GLY 320.0043
CYS 330.0035
SER 340.0030
TRP 350.0027
LEU 360.0016
PHE 370.0019
GLN 380.0024
PRO 390.0045
ARG 400.0062
GLY 410.0048
ALA 420.0047
ALA 430.0032
ALA 440.0020
SER 450.0012
PRO 460.0006
THR 470.0012
PHE 480.0023
LEU 490.0030
LEU 500.0038
TYR 510.0040
LEU 520.0038
SER 530.0029
GLN 540.0020
ASN 550.0017
LYS 560.0028
PRO 570.0033
LYS 580.0034
ALA 590.0038
ALA 600.0042
GLU 610.0051
GLY 620.0069
LEU 630.0068
ASP 640.0099
THR 650.0104
GLN 660.0128
ARG 670.0110
PHE 680.0087
SER 690.0085
GLY 700.0072
LYS 710.0067
ARG 720.0066
LEU 730.0074
GLY 740.0076
ASP 750.0062
THR 760.0051
PHE 770.0050
VAL 780.0052
LEU 790.0052
THR 800.0068
LEU 810.0091
SER 820.0111
ASP 830.0124
PHE 840.0111
ARG 850.0122
ARG 860.0124
GLU 870.0111
ASN 880.0088
GLU 890.0083
GLY 900.0062
TYR 910.0035
TYR 920.0021
PHE 930.0004
CYS 940.0019
SER 950.0033
ALA 960.0038
LEU 970.0040
SER 980.0043
ASN 990.0044
SER 1000.0041
ILE 1010.0056
MET 1020.0046
TYR 1030.0041
PHE 1040.0031
SER 1050.0026
HIS 1060.0029
PHE 1070.0026
VAL 1080.0027
PRO 1090.0048
VAL 1100.0058
PHE 1110.0088
LEU 1120.0115
PRO 1130.0129
ALA 1140.0147

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.