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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0832
MET 10.0011
SER 20.0008
THR 30.0011
ILE 40.0007
THR 50.0020
LYS 60.0022
ASP 70.0019
GLN 80.0008
ILE 90.0009
LEU 100.0011
GLU 110.0001
GLY 120.0005
VAL 130.0011
ALA 140.0012
ALA 150.0015
LEU 160.0018
SER 170.0020
VAL 180.0020
MET 190.0015
GLU 200.0011
ILE 210.0013
VAL 220.0010
GLU 230.0006
LEU 240.0007
ILE 250.0011
SER 260.0012
ALA 270.0010
MET 280.0011
GLU 290.0013
GLU 300.0010
LYS 310.0013
PHE 320.0019
GLY 330.0018
VAL 340.0025
SER 350.0026
ALA 360.0038
ALA 370.0035
ALA 380.0022
VAL 390.0029
ALA 400.0035
ALA 410.0016
GLY 420.0025
PRO 430.0043
ALA 440.0041
ALA 450.0023
ALA 460.0036
VAL 470.0047
GLU 480.0039
ALA 490.0047
ALA 500.0067
GLU 510.0061
GLU 520.0057
GLN 530.0048
THR 540.0033
GLU 550.0027
PHE 560.0031
ASP 570.0040
VAL 580.0040
VAL 590.0055
LEU 600.0061
ALA 610.0066
SER 620.0070
PHE 630.0071
GLY 640.0068
GLU 650.0074
ASN 660.0074
LYS 670.0084
VAL 680.0089
ALA 690.0074
VAL 700.0068
ILE 710.0079
LYS 720.0079
ALA 730.0063
VAL 740.0067
ARG 750.0080
GLY 760.0073
ALA 770.0058
THR 780.0067
GLY 790.0081
LEU 800.0092
GLY 810.0107
LEU 820.0106
LYS 830.0114
GLU 840.0104
ALA 850.0088
LYS 860.0085
ASP 870.0091
LEU 880.0081
VAL 890.0073
GLU 900.0081
SER 910.0076
ALA 920.0069
PRO 930.0068
ALA 940.0070
VAL 950.0068
LEU 960.0059
LYS 970.0047
GLU 980.0044
GLY 990.0030
VAL 1000.0021
ASN 1010.0018
LYS 1020.0024
ASP 1030.0026
GLU 1040.0022
ALA 1050.0019
GLU 1060.0016
THR 1070.0025
LEU 1080.0031
LYS 1090.0025
LYS 1100.0022
SER 1110.0039
LEU 1120.0043
GLU 1130.0034
GLU 1140.0038
ALA 1150.0054
GLY 1160.0050
ALA 1170.0053
SER 1180.0050
VAL 1190.0045
GLU 1200.0048
ILE 1210.0042
LYS 1220.0049
GLU 1230.0045
ALA 1240.0039
ALA 1250.0050
ALA 1260.0050
LYS 1270.0065
ALA 1280.0049
TYR 1290.0063
LYS 1300.0055
ILE 1310.0116
ILE 1320.0129
SER 1330.0144
LEU 1340.0160
LYS 1350.0174
TYR 1360.0187
THR 1370.0163
ARG 1380.0152
LYS 1390.0132
VAL 1400.0118
CYS 1410.0113
ILE 1420.0089
GLY 1430.0128
PRO 1440.0135
GLY 1450.0184
PRO 1460.0222
GLY 1470.0212
LYS 1480.0169
ALA 1490.0127
TYR 1500.0083
LYS 1510.0015
ILE 1520.0021
ILE 1530.0063
SER 1540.0086
LEU 1550.0136
LYS 1560.0155
TYR 1570.0176
THR 1580.0169
ARG 1590.0190
LYS 1600.0183
VAL 1610.0169
CYS 1620.0175
GLY 1630.0189
PRO 1640.0218
GLY 1650.0244
PRO 1660.0323
GLY 1670.0334
GLY 1680.0337
LYS 1690.0265
ALA 1700.0217
TYR 1710.0191
LYS 1720.0205
ILE 1730.0192
ILE 1740.0215
SER 1750.0213
LEU 1760.0208
LYS 1770.0169
TYR 1780.0139
THR 1790.0100
ARG 1800.0072
LYS 1810.0060
VAL 1820.0071
GLY 1830.0089
PRO 1840.0116
GLY 1850.0110
PRO 1860.0099
GLY 1870.0059
ILE 1880.0080
ILE 1890.0080
SER 1900.0111
LEU 1910.0140
LYS 1920.0142
TYR 1930.0166
THR 1940.0170
ARG 1950.0196
LYS 1960.0170
VAL 1970.0156
CYS 1980.0128
ILE 1990.0114
GLN 2000.0090
LEU 2010.0048
GLY 2020.0042
GLY 2030.0032
PRO 2040.0030
GLY 2050.0031
PRO 2060.0016
GLY 2070.0017
ASN 2080.0017
ILE 2090.0013
LYS 2100.0015
THR 2110.0015
ALA 2120.0019
PHE 2130.0020
HIS 2140.0018
CYS 2150.0023
TYR 2160.0046
ALA 2170.0035
ALA 2180.0008
TYR 2190.0033
MET 2200.0043
THR 2210.0022
SER 2220.0020
ILE 2230.0030
LYS 2240.0023
ALA 2250.0031
CYS 2260.0171
ASP 2270.0370
LEU 2280.0470
LYS 2290.0569
LYS 2300.0656
PRO 2310.0832
LEU 2320.0374
MET 2330.0378
GLU 2340.0582
SER 2350.0621
GLY 2360.0405
TRP 2370.0282
SER 2380.0176
ASP 2390.0143
THR 2400.0100
ALA 2410.0240
HIS 2420.0247
GLY 2430.0129
LYS 2440.0237
LYS 2450.0398
SER 2460.0449
LEU 2470.0347
PRO 2480.0515
SER 2490.0469
SER 2500.0344
SER 2510.0290
SER 2520.0232
TYR 2530.0116
SER 2540.0286
TYR 2550.0342
ARG 2560.0370
ARG 2570.0294
LYS 2580.0254
LEU 2590.0194
THR 2600.0222
ASN 2610.0222
PRO 2620.0365
ALA 2630.0381
ASN 2640.0369
LYS 2650.0245
GLU 2660.0151
GLU 2670.0052
SER 2680.0175
ILE 2690.0209
LYS 2700.0342
LYS 2710.0345
GLN 2720.0281
LYS 2730.0275
TYR 2740.0256
SER 2750.0308
TYR 2760.0348
PRO 2770.0291
TRP 2780.0160
GLN 2790.0350
THR 2800.0437
SER 2810.0494
LYS 2820.0428
CYS 2830.0484
PHE 2840.0502
ASP 2880.0103
TYR 2890.0059
GLN 2900.0067
TYR 2910.0172
CYS 2970.0073
ASN 2980.0095
PRO 2990.0036
GLY 3000.0051
LYS 3010.0044
LYS 3020.0026
ASN 3030.0039
THR 3040.0047
ILE 3050.0059
SER 3060.0074
GLY 3070.0066
TYR 3080.0068
LYS 3090.0064
ARG 3100.0060
MET 3110.0063
MET 3120.0064
ALA 3130.0065
THR 3140.0068
LYS 3150.0069
ASP 3160.0074
SER 3170.0080
PHE 3180.0066
GLN 3190.0066
SER 3200.0054
PHE 3210.0055
ASN 3220.0040
LEU 3230.0029
THR 3240.0023
GLU 3250.0030
PRO 3260.0038
HIS 3270.0076
ILE 3280.0108
THR 3290.0150
THR 3300.0188
ASN 3310.0190
LYS 3320.0126
LEU 3330.0094
GLU 3340.0064
TRP 3350.0037
ILE 3360.0039
ASP 3370.0044
PRO 3380.0044
ASP 3390.0044
GLY 3400.0042
ASN 3410.0044
THR 3420.0050
ARG 3430.0051
GLY 3440.0102
GLY 3450.0113
GLY 3460.0174
GLY 10.0040
SER 20.0037
HIS 30.0032
SER 40.0029
MET 50.0024
ARG 60.0021
TYR 70.0017
PHE 80.0017
PHE 90.0015
THR 100.0016
SER 110.0015
VAL 120.0019
SER 130.0024
ARG 140.0032
PRO 150.0036
GLY 160.0052
ARG 170.0052
GLY 180.0048
GLU 190.0039
PRO 200.0028
ARG 210.0023
PHE 220.0020
ILE 230.0019
ALA 240.0017
VAL 250.0018
GLY 260.0019
TYR 270.0024
VAL 280.0027
ASP 290.0032
ASP 300.0032
THR 310.0031
GLN 320.0026
PHE 330.0023
VAL 340.0020
ARG 350.0019
PHE 360.0022
ASP 370.0026
SER 380.0029
ASP 390.0034
ALA 400.0036
ALA 410.0043
SER 420.0039
GLN 430.0035
ARG 440.0031
MET 450.0024
GLU 460.0023
PRO 470.0023
ARG 480.0026
ALA 490.0028
PRO 500.0030
TRP 510.0026
ILE 520.0022
GLU 530.0025
GLN 540.0024
GLU 550.0021
GLY 560.0025
PRO 570.0031
GLU 580.0031
TYR 590.0024
TRP 600.0026
ASP 610.0032
GLY 620.0029
GLU 630.0024
THR 640.0028
ARG 650.0031
LYS 660.0025
VAL 670.0022
LYS 680.0027
ALA 690.0027
HIS 700.0021
SER 710.0022
GLN 720.0028
THR 730.0025
HIS 740.0018
ARG 750.0023
VAL 760.0024
ASP 770.0016
LEU 780.0013
GLY 790.0017
THR 800.0015
LEU 810.0011
ARG 820.0008
GLY 830.0011
TYR 840.0013
TYR 850.0010
ASN 860.0016
GLN 870.0012
SER 880.0014
GLU 890.0021
ALA 900.0024
GLY 910.0026
SER 920.0023
HIS 930.0017
THR 940.0012
VAL 950.0008
GLN 960.0012
ARG 970.0013
MET 980.0015
TYR 990.0018
GLY 1000.0021
CYS 1010.0028
ASP 1020.0032
VAL 1030.0033
GLY 1040.0038
SER 1050.0038
ASP 1060.0037
TRP 1070.0032
ARG 1080.0034
PHE 1090.0035
LEU 1100.0039
ARG 1110.0035
GLY 1120.0029
TYR 1130.0025
HIS 1140.0019
GLN 1150.0017
TYR 1160.0008
ALA 1170.0008
TYR 1180.0006
ASP 1190.0011
GLY 1200.0014
LYS 1210.0013
ASP 1220.0013
TYR 1230.0008
ILE 1240.0012
ALA 1250.0016
LEU 1260.0025
LYS 1270.0033
GLU 1280.0037
ASP 1290.0041
LEU 1300.0034
ARG 1310.0041
SER 1320.0037
TRP 1330.0029
THR 1340.0027
ALA 1350.0020
ALA 1360.0018
ASP 1370.0016
MET 1380.0017
ALA 1390.0010
ALA 1400.0012
GLN 1410.0021
THR 1420.0021
THR 1430.0019
LYS 1440.0025
HIS 1450.0032
LYS 1460.0032
TRP 1470.0031
GLU 1480.0039
ALA 1490.0043
ALA 1500.0040
HIS 1510.0042
VAL 1520.0032
ALA 1530.0034
GLU 1540.0039
GLN 1550.0032
LEU 1560.0028
ARG 1570.0033
ALA 1580.0033
TYR 1590.0026
LEU 1600.0026
GLU 1610.0032
GLY 1620.0029
THR 1630.0024
CYS 1640.0022
VAL 1650.0025
GLU 1660.0024
TRP 1670.0021
LEU 1680.0023
ARG 1690.0024
ARG 1700.0020
TYR 1710.0022
LEU 1720.0026
GLU 1730.0025
ASN 1740.0023
GLY 1750.0026
LYS 1760.0032
GLU 1770.0034
THR 1780.0032
LEU 1790.0032
GLN 1800.0035
ARG 1810.0035
THR 1820.0031
ASP 1830.0028
ALA 1840.0026
PRO 1850.0024
LYS 1860.0024
THR 1870.0024
HIS 1880.0028
MET 1890.0031
THR 1900.0034
HIS 1910.0041
HIS 1920.0041
ALA 1930.0042
VAL 1940.0035
SER 1950.0038
ASP 1960.0049
HIS 1970.0039
GLU 1980.0029
ALA 1990.0033
THR 2000.0026
LEU 2010.0028
ARG 2020.0025
CYS 2030.0023
TRP 2040.0023
ALA 2050.0021
LEU 2060.0025
SER 2070.0026
PHE 2080.0026
TYR 2090.0030
PRO 2100.0032
ALA 2110.0031
GLU 2120.0029
ILE 2130.0023
THR 2140.0021
LEU 2150.0018
THR 2160.0016
TRP 2170.0018
GLN 2180.0023
ARG 2190.0028
ASP 2200.0036
GLY 2210.0030
GLU 2220.0026
ASP 2230.0020
GLN 2240.0012
THR 2250.0016
GLN 2260.0017
ASP 2270.0013
THR 2280.0010
GLU 2290.0015
LEU 2300.0015
VAL 2310.0021
GLU 2320.0023
THR 2330.0024
ARG 2340.0025
PRO 2350.0028
ALA 2360.0031
GLY 2370.0039
ASP 2380.0041
GLY 2390.0040
THR 2400.0031
PHE 2410.0027
GLN 2420.0024
LYS 2430.0021
TRP 2440.0019
ALA 2450.0019
ALA 2460.0016
VAL 2470.0015
VAL 2480.0017
VAL 2490.0023
PRO 2500.0028
SER 2510.0040
GLY 2520.0047
GLN 2530.0041
GLU 2540.0038
GLN 2550.0044
ARG 2560.0038
TYR 2570.0030
THR 2580.0028
CYS 2590.0021
HIS 2600.0020
VAL 2610.0018
GLN 2620.0022
HIS 2630.0024
GLU 2640.0029
GLY 2650.0026
LEU 2660.0023
PRO 2670.0023
LYS 2680.0024
PRO 2690.0025
LEU 2700.0021
THR 2710.0029
LEU 2720.0031
ARG 2730.0038
TRP 2740.0039
GLU 2750.0050
PRO 2760.0058
GLN 2780.0020
ARG 2790.0019
THR 2800.0021
PRO 2810.0023
LYS 2820.0026
ILE 2830.0024
GLN 2840.0021
VAL 2850.0023
TYR 2860.0025
SER 2870.0031
ARG 2880.0036
HIS 2890.0039
PRO 2900.0039
ALA 2910.0045
GLU 2920.0055
ASN 2930.0064
GLY 2940.0071
LYS 2950.0065
SER 2960.0062
ASN 2970.0052
PHE 2980.0042
LEU 2990.0035
ASN 3000.0027
CYS 3010.0021
TYR 3020.0021
VAL 3030.0021
SER 3040.0021
GLY 3050.0021
PHE 3060.0020
HIS 3070.0021
PRO 3080.0027
SER 3090.0026
ASP 3100.0026
ILE 3110.0024
GLU 3120.0025
VAL 3130.0024
ASP 3140.0027
LEU 3150.0032
LEU 3160.0040
LYS 3170.0052
ASN 3180.0059
GLY 3190.0050
GLU 3200.0050
ARG 3210.0043
ILE 3220.0049
GLU 3230.0052
LYS 3240.0054
VAL 3250.0041
GLU 3260.0041
HIS 3270.0033
SER 3280.0024
ASP 3290.0023
LEU 3300.0023
SER 3310.0022
PHE 3320.0022
SER 3330.0017
LYS 3340.0014
ASP 3350.0017
TRP 3360.0017
SER 3370.0021
PHE 3380.0025
TYR 3390.0022
LEU 3400.0023
LEU 3410.0022
TYR 3420.0025
TYR 3430.0035
THR 3440.0043
GLU 3450.0050
PHE 3460.0052
THR 3470.0059
PRO 3480.0057
THR 3490.0070
GLU 3500.0074
LYS 3510.0080
ASP 3520.0069
GLU 3530.0057
TYR 3540.0045
ALA 3550.0035
CYS 3560.0027
ARG 3570.0025
VAL 3580.0025
ASN 3590.0027
HIS 3600.0030
VAL 3610.0034
THR 3620.0033
LEU 3630.0046
SER 3640.0048
GLN 3650.0042
PRO 3660.0037
LYS 3670.0036
ILE 3680.0035
VAL 3690.0035
LYS 3700.0038
TRP 3710.0036
ASP 3720.0039
ARG 3730.0035
ASP 3740.0036
MET 3750.0033
SER 10.0018
GLN 20.0018
PHE 30.0016
ARG 40.0015
VAL 50.0015
SER 60.0017
PRO 70.0017
LEU 80.0016
ASP 90.0017
ARG 100.0015
THR 110.0015
TRP 120.0016
ASN 130.0018
LEU 140.0025
GLY 150.0028
GLU 160.0021
THR 170.0023
VAL 180.0021
GLU 190.0022
LEU 200.0021
LYS 210.0018
CYS 220.0018
GLN 230.0018
VAL 240.0019
LEU 250.0018
LEU 260.0019
SER 270.0016
ASN 280.0016
PRO 290.0015
THR 300.0014
SER 310.0023
GLY 320.0023
CYS 330.0022
SER 340.0020
TRP 350.0019
LEU 360.0020
PHE 370.0019
GLN 380.0015
PRO 390.0018
ARG 400.0016
GLY 410.0026
ALA 420.0029
ALA 430.0027
ALA 440.0022
SER 450.0018
PRO 460.0014
THR 470.0019
PHE 480.0021
LEU 490.0024
LEU 500.0026
TYR 510.0025
LEU 520.0024
SER 530.0025
GLN 540.0026
ASN 550.0027
LYS 560.0031
PRO 570.0028
LYS 580.0029
ALA 590.0028
ALA 600.0028
GLU 610.0032
GLY 620.0034
LEU 630.0033
ASP 640.0037
THR 650.0039
GLN 660.0040
ARG 670.0035
PHE 680.0032
SER 690.0034
GLY 700.0032
LYS 710.0026
ARG 720.0026
LEU 730.0027
GLY 740.0027
ASP 750.0024
THR 760.0025
PHE 770.0024
VAL 780.0024
LEU 790.0023
THR 800.0025
LEU 810.0029
SER 820.0031
ASP 830.0029
PHE 840.0026
ARG 850.0028
ARG 860.0031
GLU 870.0037
ASN 880.0030
GLU 890.0023
GLY 900.0020
TYR 910.0013
TYR 920.0016
PHE 930.0016
CYS 940.0019
SER 950.0019
ALA 960.0020
LEU 970.0020
SER 980.0020
ASN 990.0021
SER 1000.0023
ILE 1010.0022
MET 1020.0020
TYR 1030.0018
PHE 1040.0016
SER 1050.0014
HIS 1060.0013
PHE 1070.0012
VAL 1080.0013
PRO 1090.0011
VAL 1100.0012
PHE 1110.0016
LEU 1120.0017
PRO 1130.0020
ALA 1140.0030
SER 10.0033
GLN 20.0036
PHE 30.0029
ARG 40.0026
VAL 50.0015
SER 60.0008
PRO 70.0008
LEU 80.0022
ASP 90.0032
ARG 100.0033
THR 110.0046
TRP 120.0051
ASN 130.0068
LEU 140.0079
GLY 150.0080
GLU 160.0062
THR 170.0053
VAL 180.0039
GLU 190.0030
LEU 200.0018
LYS 210.0021
CYS 220.0021
GLN 230.0031
VAL 240.0036
LEU 250.0043
LEU 260.0039
SER 270.0049
ASN 280.0051
PRO 290.0044
THR 300.0048
SER 310.0037
GLY 320.0034
CYS 330.0028
SER 340.0025
TRP 350.0021
LEU 360.0014
PHE 370.0013
GLN 380.0014
PRO 390.0026
ARG 400.0034
GLY 410.0022
ALA 420.0015
ALA 430.0004
ALA 440.0006
SER 450.0005
PRO 460.0005
THR 470.0014
PHE 480.0020
LEU 490.0024
LEU 500.0030
TYR 510.0033
LEU 520.0036
SER 530.0035
GLN 540.0037
ASN 550.0036
LYS 560.0039
PRO 570.0036
LYS 580.0033
ALA 590.0032
ALA 600.0029
GLU 610.0032
GLY 620.0047
LEU 630.0049
ASP 640.0069
THR 650.0073
GLN 660.0085
ARG 670.0071
PHE 680.0058
SER 690.0058
GLY 700.0051
LYS 710.0049
ARG 720.0049
LEU 730.0052
GLY 740.0055
ASP 750.0047
THR 760.0039
PHE 770.0036
VAL 780.0034
LEU 790.0033
THR 800.0041
LEU 810.0053
SER 820.0064
ASP 830.0072
PHE 840.0064
ARG 850.0076
ARG 860.0078
GLU 870.0073
ASN 880.0055
GLU 890.0050
GLY 900.0037
TYR 910.0018
TYR 920.0011
PHE 930.0004
CYS 940.0015
SER 950.0023
ALA 960.0026
LEU 970.0026
SER 980.0027
ASN 990.0025
SER 1000.0022
ILE 1010.0027
MET 1020.0022
TYR 1030.0022
PHE 1040.0018
SER 1050.0018
HIS 1060.0020
PHE 1070.0014
VAL 1080.0013
PRO 1090.0026
VAL 1100.0031
PHE 1110.0050
LEU 1120.0066
PRO 1130.0074
ALA 1140.0088

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.