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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0552
MET 10.0102
SER 20.0066
THR 30.0081
ILE 40.0054
THR 50.0128
LYS 60.0130
ASP 70.0121
GLN 80.0063
ILE 90.0044
LEU 100.0061
GLU 110.0009
GLY 120.0047
VAL 130.0077
ALA 140.0096
ALA 150.0123
LEU 160.0146
SER 170.0178
VAL 180.0174
MET 190.0133
GLU 200.0096
ILE 210.0091
VAL 220.0078
GLU 230.0025
LEU 240.0033
ILE 250.0081
SER 260.0090
ALA 270.0066
MET 280.0056
GLU 290.0083
GLU 300.0080
LYS 310.0062
PHE 320.0064
GLY 330.0068
VAL 340.0095
SER 350.0116
ALA 360.0213
ALA 370.0134
ALA 380.0065
VAL 390.0206
ALA 400.0222
ALA 410.0155
GLY 420.0309
PRO 430.0381
ALA 440.0372
ALA 450.0216
ALA 460.0174
VAL 470.0172
GLU 480.0256
ALA 490.0322
ALA 500.0312
GLU 510.0256
GLU 520.0221
GLN 530.0186
THR 540.0190
GLU 550.0154
PHE 560.0156
ASP 570.0143
VAL 580.0135
VAL 590.0135
LEU 600.0124
ALA 610.0148
SER 620.0138
PHE 630.0113
GLY 640.0133
GLU 650.0124
ASN 660.0107
LYS 670.0079
VAL 680.0064
ALA 690.0096
VAL 700.0094
ILE 710.0059
LYS 720.0076
ALA 730.0102
VAL 740.0079
ARG 750.0054
GLY 760.0087
ALA 770.0094
THR 780.0061
GLY 790.0043
LEU 800.0015
GLY 810.0030
LEU 820.0026
LYS 830.0043
GLU 840.0045
ALA 850.0035
LYS 860.0044
ASP 870.0070
LEU 880.0079
VAL 890.0080
GLU 900.0090
SER 910.0100
ALA 920.0104
PRO 930.0114
ALA 940.0112
VAL 950.0119
LEU 960.0101
LYS 970.0108
GLU 980.0126
GLY 990.0138
VAL 1000.0137
ASN 1010.0157
LYS 1020.0182
ASP 1030.0178
GLU 1040.0148
ALA 1050.0155
GLU 1060.0182
THR 1070.0166
LEU 1080.0141
LYS 1090.0161
LYS 1100.0174
SER 1110.0154
LEU 1120.0140
GLU 1130.0170
GLU 1140.0172
ALA 1150.0140
GLY 1160.0146
ALA 1170.0139
SER 1180.0162
VAL 1190.0160
GLU 1200.0178
ILE 1210.0145
LYS 1220.0145
GLU 1230.0143
ALA 1240.0133
ALA 1250.0140
ALA 1260.0087
LYS 1270.0090
ALA 1280.0072
TYR 1290.0078
LYS 1300.0063
ILE 1310.0060
ILE 1320.0064
SER 1330.0076
LEU 1340.0091
LYS 1350.0112
TYR 1360.0131
THR 1370.0118
ARG 1380.0128
LYS 1390.0118
VAL 1400.0122
CYS 1410.0105
ILE 1420.0092
GLY 1430.0069
PRO 1440.0051
GLY 1450.0044
PRO 1460.0085
GLY 1470.0119
LYS 1480.0108
ALA 1490.0082
TYR 1500.0064
LYS 1510.0060
ILE 1520.0057
ILE 1530.0077
SER 1540.0078
LEU 1550.0102
LYS 1560.0096
TYR 1570.0105
THR 1580.0103
ARG 1590.0112
LYS 1600.0110
VAL 1610.0103
CYS 1620.0104
GLY 1630.0108
PRO 1640.0116
GLY 1650.0121
PRO 1660.0147
GLY 1670.0170
GLY 1680.0177
LYS 1690.0156
ALA 1700.0135
TYR 1710.0120
LYS 1720.0124
ILE 1730.0116
ILE 1740.0122
SER 1750.0114
LEU 1760.0121
LYS 1770.0102
TYR 1780.0096
THR 1790.0079
ARG 1800.0074
LYS 1810.0058
VAL 1820.0063
GLY 1830.0054
PRO 1840.0059
GLY 1850.0046
PRO 1860.0047
GLY 1870.0047
ILE 1880.0071
ILE 1890.0084
SER 1900.0099
LEU 1910.0110
LYS 1920.0101
TYR 1930.0105
THR 1940.0097
ARG 1950.0104
LYS 1960.0086
VAL 1970.0081
CYS 1980.0079
ILE 1990.0081
GLN 2000.0091
LEU 2010.0059
GLY 2020.0047
GLY 2030.0040
PRO 2040.0054
GLY 2050.0071
PRO 2060.0060
GLY 2070.0066
ASN 2080.0077
ILE 2090.0076
LYS 2100.0071
THR 2110.0066
ALA 2120.0068
PHE 2130.0072
HIS 2140.0062
CYS 2150.0053
TYR 2160.0045
ALA 2170.0057
ALA 2180.0044
TYR 2190.0036
MET 2200.0053
THR 2210.0052
SER 2220.0054
ILE 2230.0042
LYS 2240.0062
ALA 2250.0065
CYS 2260.0084
ASP 2270.0060
LEU 2280.0057
LYS 2290.0042
LYS 2300.0052
PRO 2310.0076
LEU 2320.0075
MET 2330.0068
GLU 2340.0154
SER 2350.0171
GLY 2360.0078
TRP 2370.0056
SER 2380.0054
ASP 2390.0056
THR 2400.0083
ALA 2410.0195
HIS 2420.0106
GLY 2430.0078
LYS 2440.0028
LYS 2450.0025
SER 2460.0009
LEU 2470.0016
PRO 2480.0070
SER 2490.0094
SER 2500.0084
SER 2510.0020
SER 2520.0015
TYR 2530.0019
SER 2540.0033
TYR 2550.0044
ARG 2560.0047
ARG 2570.0046
LYS 2580.0034
LEU 2590.0035
THR 2600.0028
ASN 2610.0040
PRO 2620.0046
ALA 2630.0056
ASN 2640.0036
LYS 2650.0044
GLU 2660.0032
GLU 2670.0040
SER 2680.0031
ILE 2690.0022
LYS 2700.0028
LYS 2710.0016
GLN 2720.0017
LYS 2730.0022
TYR 2740.0032
SER 2750.0040
TYR 2760.0051
PRO 2770.0043
TRP 2780.0022
GLN 2790.0043
THR 2800.0060
SER 2810.0071
LYS 2820.0065
CYS 2830.0070
PHE 2840.0070
ASP 2880.0067
TYR 2890.0037
GLN 2900.0036
TYR 2910.0096
CYS 2970.0242
ASN 2980.0244
PRO 2990.0207
GLY 3000.0191
LYS 3010.0229
LYS 3020.0190
ASN 3030.0161
THR 3040.0142
ILE 3050.0146
SER 3060.0125
GLY 3070.0159
TYR 3080.0146
LYS 3090.0119
ARG 3100.0118
MET 3110.0117
MET 3120.0114
ALA 3130.0095
THR 3140.0110
LYS 3150.0148
ASP 3160.0220
SER 3170.0232
PHE 3180.0172
GLN 3190.0189
SER 3200.0136
PHE 3210.0120
ASN 3220.0099
LEU 3230.0072
THR 3240.0122
GLU 3250.0127
PRO 3260.0080
HIS 3270.0133
ILE 3280.0203
THR 3290.0276
THR 3300.0363
ASN 3310.0342
LYS 3320.0232
LEU 3330.0141
GLU 3340.0071
TRP 3350.0025
ILE 3360.0117
ASP 3370.0144
PRO 3380.0171
ASP 3390.0187
GLY 3400.0227
ASN 3410.0227
THR 3420.0222
ARG 3430.0378
GLY 3440.0336
GLY 3450.0204
GLY 3460.0552
GLY 10.0058
SER 20.0066
HIS 30.0050
SER 40.0050
MET 50.0047
ARG 60.0039
TYR 70.0037
PHE 80.0025
PHE 90.0026
THR 100.0027
SER 110.0018
VAL 120.0024
SER 130.0021
ARG 140.0022
PRO 150.0021
GLY 160.0019
ARG 170.0036
GLY 180.0053
GLU 190.0052
PRO 200.0032
ARG 210.0049
PHE 220.0041
ILE 230.0043
ALA 240.0039
VAL 250.0038
GLY 260.0045
TYR 270.0035
VAL 280.0035
ASP 290.0038
ASP 300.0058
THR 310.0062
GLN 320.0062
PHE 330.0078
VAL 340.0088
ARG 350.0086
PHE 360.0099
ASP 370.0100
SER 380.0105
ASP 390.0129
ALA 400.0163
ALA 410.0225
SER 420.0228
GLN 430.0196
ARG 440.0192
MET 450.0158
GLU 460.0155
PRO 470.0148
ARG 480.0129
ALA 490.0133
PRO 500.0171
TRP 510.0154
ILE 520.0157
GLU 530.0205
GLN 540.0226
GLU 550.0220
GLY 560.0279
PRO 570.0297
GLU 580.0298
TYR 590.0241
TRP 600.0229
ASP 610.0256
GLY 620.0237
GLU 630.0186
THR 640.0192
ARG 650.0212
LYS 660.0166
VAL 670.0123
LYS 680.0137
ALA 690.0147
HIS 700.0106
SER 710.0065
GLN 720.0079
THR 730.0082
HIS 740.0054
ARG 750.0048
VAL 760.0047
ASP 770.0045
LEU 780.0035
GLY 790.0042
THR 800.0053
LEU 810.0031
ARG 820.0030
GLY 830.0036
TYR 840.0039
TYR 850.0039
ASN 860.0035
GLN 870.0034
SER 880.0033
GLU 890.0034
ALA 900.0033
GLY 910.0037
SER 920.0030
HIS 930.0032
THR 940.0029
VAL 950.0027
GLN 960.0033
ARG 970.0037
MET 980.0037
TYR 990.0053
GLY 1000.0055
CYS 1010.0075
ASP 1020.0079
VAL 1030.0091
GLY 1040.0103
SER 1050.0094
ASP 1060.0116
TRP 1070.0098
ARG 1080.0125
PHE 1090.0124
LEU 1100.0123
ARG 1110.0098
GLY 1120.0085
TYR 1130.0073
HIS 1140.0061
GLN 1150.0054
TYR 1160.0042
ALA 1170.0043
TYR 1180.0043
ASP 1190.0047
GLY 1200.0054
LYS 1210.0060
ASP 1220.0059
TYR 1230.0056
ILE 1240.0061
ALA 1250.0062
LEU 1260.0077
LYS 1270.0097
GLU 1280.0099
ASP 1290.0118
LEU 1300.0103
ARG 1310.0129
SER 1320.0121
TRP 1330.0097
THR 1340.0097
ALA 1350.0089
ALA 1360.0082
ASP 1370.0069
MET 1380.0062
ALA 1390.0047
ALA 1400.0054
GLN 1410.0084
THR 1420.0075
THR 1430.0066
LYS 1440.0085
HIS 1450.0099
LYS 1460.0096
TRP 1470.0097
GLU 1480.0122
ALA 1490.0132
ALA 1500.0124
HIS 1510.0138
VAL 1520.0111
ALA 1530.0115
GLU 1540.0140
GLN 1550.0130
LEU 1560.0108
ARG 1570.0124
ALA 1580.0136
TYR 1590.0116
LEU 1600.0107
GLU 1610.0138
GLY 1620.0144
THR 1630.0134
CYS 1640.0107
VAL 1650.0111
GLU 1660.0138
TRP 1670.0125
LEU 1680.0090
ARG 1690.0095
ARG 1700.0117
TYR 1710.0097
LEU 1720.0070
GLU 1730.0093
ASN 1740.0118
GLY 1750.0099
LYS 1760.0075
GLU 1770.0092
THR 1780.0088
LEU 1790.0057
GLN 1800.0047
ARG 1810.0073
THR 1820.0068
ASP 1830.0061
ALA 1840.0061
PRO 1850.0055
LYS 1860.0032
THR 1870.0036
HIS 1880.0050
MET 1890.0063
THR 1900.0079
HIS 1910.0103
HIS 1920.0117
ALA 1930.0131
VAL 1940.0122
SER 1950.0143
ASP 1960.0173
HIS 1970.0139
GLU 1980.0104
ALA 1990.0102
THR 2000.0075
LEU 2010.0066
ARG 2020.0051
CYS 2030.0040
TRP 2040.0034
ALA 2050.0030
LEU 2060.0039
SER 2070.0043
PHE 2080.0050
TYR 2090.0062
PRO 2100.0068
ALA 2110.0067
GLU 2120.0068
ILE 2130.0056
THR 2140.0054
LEU 2150.0043
THR 2160.0042
TRP 2170.0036
GLN 2180.0057
ARG 2190.0069
ASP 2200.0097
GLY 2210.0088
GLU 2220.0070
ASP 2230.0055
GLN 2240.0026
THR 2250.0053
GLN 2260.0053
ASP 2270.0036
THR 2280.0032
GLU 2290.0044
LEU 2300.0044
VAL 2310.0040
GLU 2320.0049
THR 2330.0049
ARG 2340.0056
PRO 2350.0062
ALA 2360.0064
GLY 2370.0084
ASP 2380.0077
GLY 2390.0080
THR 2400.0060
PHE 2410.0051
GLN 2420.0043
LYS 2430.0039
TRP 2440.0034
ALA 2450.0031
ALA 2460.0034
VAL 2470.0029
VAL 2480.0049
VAL 2490.0066
PRO 2500.0091
SER 2510.0124
GLY 2520.0137
GLN 2530.0115
GLU 2540.0104
GLN 2550.0119
ARG 2560.0102
TYR 2570.0075
THR 2580.0070
CYS 2590.0047
HIS 2600.0055
VAL 2610.0049
GLN 2620.0060
HIS 2630.0063
GLU 2640.0073
GLY 2650.0064
LEU 2660.0071
PRO 2670.0089
LYS 2680.0092
PRO 2690.0084
LEU 2700.0066
THR 2710.0084
LEU 2720.0075
ARG 2730.0097
TRP 2740.0097
GLU 2750.0129
PRO 2760.0149
GLN 2780.0049
ARG 2790.0045
THR 2800.0049
PRO 2810.0046
LYS 2820.0040
ILE 2830.0044
GLN 2840.0045
VAL 2850.0062
TYR 2860.0060
SER 2870.0070
ARG 2880.0070
HIS 2890.0066
PRO 2900.0060
ALA 2910.0077
GLU 2920.0089
ASN 2930.0121
GLY 2940.0137
LYS 2950.0121
SER 2960.0127
ASN 2970.0108
PHE 2980.0097
LEU 2990.0088
ASN 3000.0072
CYS 3010.0061
TYR 3020.0050
VAL 3030.0047
SER 3040.0045
GLY 3050.0044
PHE 3060.0049
HIS 3070.0057
PRO 3080.0056
SER 3090.0067
ASP 3100.0074
ILE 3110.0067
GLU 3120.0082
VAL 3130.0089
ASP 3140.0112
LEU 3150.0114
LEU 3160.0137
LYS 3170.0158
ASN 3180.0176
GLY 3190.0172
GLU 3200.0181
ARG 3210.0167
ILE 3220.0163
GLU 3230.0158
LYS 3240.0152
VAL 3250.0110
GLU 3260.0104
HIS 3270.0079
SER 3280.0071
ASP 3290.0061
LEU 3300.0061
SER 3310.0059
PHE 3320.0064
SER 3330.0065
LYS 3340.0066
ASP 3350.0073
TRP 3360.0063
SER 3370.0071
PHE 3380.0062
TYR 3390.0057
LEU 3400.0061
LEU 3410.0058
TYR 3420.0064
TYR 3430.0089
THR 3440.0112
GLU 3450.0123
PHE 3460.0124
THR 3470.0130
PRO 3480.0127
THR 3490.0153
GLU 3500.0161
LYS 3510.0190
ASP 3520.0176
GLU 3530.0151
TYR 3540.0128
ALA 3550.0112
CYS 3560.0096
ARG 3570.0103
VAL 3580.0081
ASN 3590.0083
HIS 3600.0068
VAL 3610.0064
THR 3620.0050
LEU 3630.0081
SER 3640.0095
GLN 3650.0104
PRO 3660.0102
LYS 3670.0094
ILE 3680.0110
VAL 3690.0099
LYS 3700.0107
TRP 3710.0096
ASP 3720.0092
ARG 3730.0085
ASP 3740.0085
MET 3750.0077
SER 10.0079
GLN 20.0082
PHE 30.0083
ARG 40.0084
VAL 50.0082
SER 60.0098
PRO 70.0100
LEU 80.0088
ASP 90.0100
ARG 100.0095
THR 110.0096
TRP 120.0111
ASN 130.0118
LEU 140.0131
GLY 150.0151
GLU 160.0143
THR 170.0138
VAL 180.0121
GLU 190.0122
LEU 200.0107
LYS 210.0095
CYS 220.0091
GLN 230.0096
VAL 240.0093
LEU 250.0095
LEU 260.0086
SER 270.0075
ASN 280.0070
PRO 290.0072
THR 300.0065
SER 310.0083
GLY 320.0087
CYS 330.0084
SER 340.0077
TRP 350.0079
LEU 360.0074
PHE 370.0070
GLN 380.0056
PRO 390.0059
ARG 400.0052
GLY 410.0060
ALA 420.0047
ALA 430.0037
ALA 440.0046
SER 450.0041
PRO 460.0049
THR 470.0060
PHE 480.0068
LEU 490.0081
LEU 500.0088
TYR 510.0084
LEU 520.0088
SER 530.0088
GLN 540.0091
ASN 550.0089
LYS 560.0101
PRO 570.0097
LYS 580.0089
ALA 590.0088
ALA 600.0081
GLU 610.0086
GLY 620.0103
LEU 630.0109
ASP 640.0131
THR 650.0137
GLN 660.0155
ARG 670.0145
PHE 680.0128
SER 690.0133
GLY 700.0129
LYS 710.0114
ARG 720.0114
LEU 730.0128
GLY 740.0126
ASP 750.0114
THR 760.0119
PHE 770.0109
VAL 780.0115
LEU 790.0107
THR 800.0120
LEU 810.0134
SER 820.0150
ASP 830.0150
PHE 840.0131
ARG 850.0126
ARG 860.0113
GLU 870.0121
ASN 880.0116
GLU 890.0093
GLY 900.0079
TYR 910.0066
TYR 920.0076
PHE 930.0074
CYS 940.0081
SER 950.0075
ALA 960.0080
LEU 970.0076
SER 980.0076
ASN 990.0072
SER 1000.0070
ILE 1010.0075
MET 1020.0072
TYR 1030.0074
PHE 1040.0071
SER 1050.0075
HIS 1060.0066
PHE 1070.0062
VAL 1080.0076
PRO 1090.0072
VAL 1100.0083
PHE 1110.0083
LEU 1120.0087
PRO 1130.0074
ALA 1140.0053
SER 10.0050
GLN 20.0048
PHE 30.0041
ARG 40.0041
VAL 50.0045
SER 60.0060
PRO 70.0075
LEU 80.0073
ASP 90.0096
ARG 100.0105
THR 110.0111
TRP 120.0120
ASN 130.0138
LEU 140.0144
GLY 150.0153
GLU 160.0140
THR 170.0128
VAL 180.0103
GLU 190.0093
LEU 200.0070
LYS 210.0062
CYS 220.0051
GLN 230.0050
VAL 240.0052
LEU 250.0049
LEU 260.0054
SER 270.0058
ASN 280.0065
PRO 290.0062
THR 300.0070
SER 310.0068
GLY 320.0066
CYS 330.0060
SER 340.0061
TRP 350.0056
LEU 360.0053
PHE 370.0044
GLN 380.0035
PRO 390.0035
ARG 400.0041
GLY 410.0022
ALA 420.0025
ALA 430.0029
ALA 440.0028
SER 450.0040
PRO 460.0047
THR 470.0052
PHE 480.0061
LEU 490.0061
LEU 500.0068
TYR 510.0066
LEU 520.0057
SER 530.0050
GLN 540.0040
ASN 550.0041
LYS 560.0061
PRO 570.0065
LYS 580.0070
ALA 590.0074
ALA 600.0080
GLU 610.0085
GLY 620.0076
LEU 630.0077
ASP 640.0101
THR 650.0123
GLN 660.0143
ARG 670.0123
PHE 680.0103
SER 690.0104
GLY 700.0090
LYS 710.0084
ARG 720.0081
LEU 730.0083
GLY 740.0078
ASP 750.0065
THR 760.0062
PHE 770.0069
VAL 780.0075
LEU 790.0076
THR 800.0091
LEU 810.0108
SER 820.0128
ASP 830.0135
PHE 840.0118
ARG 850.0117
ARG 860.0108
GLU 870.0091
ASN 880.0084
GLU 890.0074
GLY 900.0051
TYR 910.0041
TYR 920.0042
PHE 930.0039
CYS 940.0046
SER 950.0057
ALA 960.0058
LEU 970.0060
SER 980.0059
ASN 990.0063
SER 1000.0068
ILE 1010.0069
MET 1020.0063
TYR 1030.0054
PHE 1040.0049
SER 1050.0042
HIS 1060.0040
PHE 1070.0040
VAL 1080.0049
PRO 1090.0060
VAL 1100.0071
PHE 1110.0089
LEU 1120.0117
PRO 1130.0135
ALA 1140.0141

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.