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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 66  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0588
MET 10.0022
SER 20.0016
THR 30.0019
ILE 40.0012
THR 50.0035
LYS 60.0038
ASP 70.0032
GLN 80.0013
ILE 90.0016
LEU 100.0021
GLU 110.0006
GLY 120.0014
VAL 130.0025
ALA 140.0030
ALA 150.0036
LEU 160.0041
SER 170.0049
VAL 180.0049
MET 190.0036
GLU 200.0025
ILE 210.0026
VAL 220.0024
GLU 230.0010
LEU 240.0012
ILE 250.0026
SER 260.0025
ALA 270.0023
MET 280.0020
GLU 290.0022
GLU 300.0022
LYS 310.0025
PHE 320.0022
GLY 330.0019
VAL 340.0019
SER 350.0020
ALA 360.0052
ALA 370.0028
ALA 380.0038
VAL 390.0070
ALA 400.0075
ALA 410.0069
GLY 420.0116
PRO 430.0135
ALA 440.0132
ALA 450.0084
ALA 460.0077
VAL 470.0067
GLU 480.0100
ALA 490.0138
ALA 500.0128
GLU 510.0093
GLU 520.0078
GLN 530.0061
THR 540.0059
GLU 550.0043
PHE 560.0041
ASP 570.0041
VAL 580.0032
VAL 590.0039
LEU 600.0033
ALA 610.0044
SER 620.0037
PHE 630.0023
GLY 640.0018
GLU 650.0012
ASN 660.0019
LYS 670.0025
VAL 680.0042
ALA 690.0038
VAL 700.0024
ILE 710.0040
LYS 720.0052
ALA 730.0039
VAL 740.0033
ARG 750.0056
GLY 760.0058
ALA 770.0039
THR 780.0048
GLY 790.0070
LEU 800.0077
GLY 810.0094
LEU 820.0086
LYS 830.0092
GLU 840.0084
ALA 850.0059
LYS 860.0052
ASP 870.0066
LEU 880.0054
VAL 890.0037
GLU 900.0051
SER 910.0056
ALA 920.0051
PRO 930.0052
ALA 940.0050
VAL 950.0046
LEU 960.0036
LYS 970.0033
GLU 980.0042
GLY 990.0039
VAL 1000.0025
ASN 1010.0029
LYS 1020.0041
ASP 1030.0040
GLU 1040.0025
ALA 1050.0025
GLU 1060.0037
THR 1070.0034
LEU 1080.0021
LYS 1090.0026
LYS 1100.0038
SER 1110.0035
LEU 1120.0022
GLU 1130.0033
GLU 1140.0044
ALA 1150.0033
GLY 1160.0020
ALA 1170.0015
SER 1180.0028
VAL 1190.0029
GLU 1200.0042
ILE 1210.0034
LYS 1220.0041
GLU 1230.0046
ALA 1240.0046
ALA 1250.0054
ALA 1260.0044
LYS 1270.0039
ALA 1280.0035
TYR 1290.0027
LYS 1300.0023
ILE 1310.0028
ILE 1320.0035
SER 1330.0035
LEU 1340.0041
LYS 1350.0042
TYR 1360.0048
THR 1370.0046
ARG 1380.0050
LYS 1390.0050
VAL 1400.0048
CYS 1410.0053
ILE 1420.0055
GLY 1430.0052
PRO 1440.0051
GLY 1450.0052
PRO 1460.0048
GLY 1470.0045
LYS 1480.0045
ALA 1490.0037
TYR 1500.0039
LYS 1510.0035
ILE 1520.0035
ILE 1530.0039
SER 1540.0040
LEU 1550.0044
LYS 1560.0044
TYR 1570.0042
THR 1580.0041
ARG 1590.0039
LYS 1600.0038
VAL 1610.0035
CYS 1620.0033
GLY 1630.0029
PRO 1640.0031
GLY 1650.0038
PRO 1660.0054
GLY 1670.0058
GLY 1680.0048
LYS 1690.0044
ALA 1700.0033
TYR 1710.0032
LYS 1720.0031
ILE 1730.0036
ILE 1740.0039
SER 1750.0046
LEU 1760.0050
LYS 1770.0047
TYR 1780.0046
THR 1790.0043
ARG 1800.0041
LYS 1810.0034
VAL 1820.0031
GLY 1830.0025
PRO 1840.0025
GLY 1850.0026
PRO 1860.0031
GLY 1870.0030
ILE 1880.0034
ILE 1890.0034
SER 1900.0037
LEU 1910.0035
LYS 1920.0035
TYR 1930.0036
THR 1940.0036
ARG 1950.0039
LYS 1960.0034
VAL 1970.0032
CYS 1980.0029
ILE 1990.0027
GLN 2000.0024
LEU 2010.0035
GLY 2020.0033
GLY 2030.0031
PRO 2040.0033
GLY 2050.0038
PRO 2060.0034
GLY 2070.0038
ASN 2080.0050
ILE 2090.0050
LYS 2100.0043
THR 2110.0041
ALA 2120.0054
PHE 2130.0054
HIS 2140.0043
CYS 2150.0047
TYR 2160.0049
ALA 2170.0046
ALA 2180.0037
TYR 2190.0040
MET 2200.0048
THR 2210.0043
SER 2220.0058
ILE 2230.0080
LYS 2240.0106
ALA 2250.0133
CYS 2260.0172
ASP 2270.0170
LEU 2280.0079
LYS 2290.0082
LYS 2300.0054
PRO 2310.0055
LEU 2320.0034
MET 2330.0028
GLU 2340.0028
SER 2350.0021
GLY 2360.0023
TRP 2370.0016
SER 2380.0013
ASP 2390.0014
THR 2400.0019
ALA 2410.0051
HIS 2420.0032
GLY 2430.0021
LYS 2440.0013
LYS 2450.0020
SER 2460.0023
LEU 2470.0018
PRO 2480.0025
SER 2490.0026
SER 2500.0019
SER 2510.0016
SER 2520.0011
TYR 2530.0008
SER 2540.0020
TYR 2550.0026
ARG 2560.0026
ARG 2570.0026
LYS 2580.0022
LEU 2590.0018
THR 2600.0020
ASN 2610.0014
PRO 2620.0025
ALA 2630.0029
ASN 2640.0039
LYS 2650.0033
GLU 2660.0022
GLU 2670.0012
SER 2680.0008
ILE 2690.0010
LYS 2700.0012
LYS 2710.0015
GLN 2720.0016
LYS 2730.0015
TYR 2740.0017
SER 2750.0016
TYR 2760.0010
PRO 2770.0033
TRP 2780.0010
GLN 2790.0037
THR 2800.0048
SER 2810.0009
LYS 2820.0035
CYS 2830.0009
PHE 2840.0041
ASP 2880.0015
TYR 2890.0009
GLN 2900.0012
TYR 2910.0018
CYS 2970.0424
ASN 2980.0396
PRO 2990.0271
GLY 3000.0188
LYS 3010.0210
LYS 3020.0214
ASN 3030.0164
THR 3040.0180
ILE 3050.0155
SER 3060.0092
GLY 3070.0120
TYR 3080.0098
LYS 3090.0124
ARG 3100.0157
MET 3110.0152
MET 3120.0157
ALA 3130.0199
THR 3140.0243
LYS 3150.0243
ASP 3160.0347
SER 3170.0384
PHE 3180.0279
GLN 3190.0286
SER 3200.0164
PHE 3210.0156
ASN 3220.0080
LEU 3230.0059
THR 3240.0042
GLU 3250.0060
PRO 3260.0078
HIS 3270.0128
ILE 3280.0157
THR 3290.0190
THR 3300.0222
ASN 3310.0212
LYS 3320.0193
LEU 3330.0151
GLU 3340.0116
TRP 3350.0072
ILE 3360.0045
ASP 3370.0061
PRO 3380.0103
ASP 3390.0167
GLY 3400.0223
ASN 3410.0265
THR 3420.0230
ARG 3430.0584
GLY 3440.0359
GLY 3450.0518
GLY 3460.0588
GLY 10.0048
SER 20.0053
HIS 30.0041
SER 40.0038
MET 50.0032
ARG 60.0028
TYR 70.0027
PHE 80.0035
PHE 90.0037
THR 100.0052
SER 110.0054
VAL 120.0065
SER 130.0068
ARG 140.0076
PRO 150.0081
GLY 160.0092
ARG 170.0086
GLY 180.0074
GLU 190.0063
PRO 200.0063
ARG 210.0069
PHE 220.0054
ILE 230.0055
ALA 240.0042
VAL 250.0043
GLY 260.0032
TYR 270.0030
VAL 280.0029
ASP 290.0034
ASP 300.0053
THR 310.0054
GLN 320.0055
PHE 330.0058
VAL 340.0058
ARG 350.0058
PHE 360.0065
ASP 370.0075
SER 380.0074
ASP 390.0098
ALA 400.0109
ALA 410.0141
SER 420.0136
GLN 430.0109
ARG 440.0106
MET 450.0091
GLU 460.0089
PRO 470.0091
ARG 480.0089
ALA 490.0092
PRO 500.0115
TRP 510.0111
ILE 520.0109
GLU 530.0138
GLN 540.0155
GLU 550.0147
GLY 560.0179
PRO 570.0182
GLU 580.0179
TYR 590.0144
TRP 600.0133
ASP 610.0140
GLY 620.0125
GLU 630.0097
THR 640.0098
ARG 650.0097
LYS 660.0070
VAL 670.0052
LYS 680.0055
ALA 690.0044
HIS 700.0030
SER 710.0033
GLN 720.0029
THR 730.0028
HIS 740.0038
ARG 750.0049
VAL 760.0049
ASP 770.0048
LEU 780.0057
GLY 790.0062
THR 800.0061
LEU 810.0056
ARG 820.0061
GLY 830.0064
TYR 840.0059
TYR 850.0058
ASN 860.0057
GLN 870.0058
SER 880.0065
GLU 890.0068
ALA 900.0068
GLY 910.0072
SER 920.0066
HIS 930.0061
THR 940.0055
VAL 950.0049
GLN 960.0043
ARG 970.0033
MET 980.0029
TYR 990.0030
GLY 1000.0035
CYS 1010.0054
ASP 1020.0063
VAL 1030.0080
GLY 1040.0092
SER 1050.0093
ASP 1060.0117
TRP 1070.0099
ARG 1080.0113
PHE 1090.0102
LEU 1100.0097
ARG 1110.0068
GLY 1120.0054
TYR 1130.0043
HIS 1140.0031
GLN 1150.0034
TYR 1160.0034
ALA 1170.0041
TYR 1180.0048
ASP 1190.0053
GLY 1200.0049
LYS 1210.0047
ASP 1220.0044
TYR 1230.0046
ILE 1240.0043
ALA 1250.0038
LEU 1260.0048
LYS 1270.0062
GLU 1280.0066
ASP 1290.0074
LEU 1300.0061
ARG 1310.0068
SER 1320.0065
TRP 1330.0057
THR 1340.0062
ALA 1350.0064
ALA 1360.0057
ASP 1370.0058
MET 1380.0061
ALA 1390.0057
ALA 1400.0054
GLN 1410.0062
THR 1420.0058
THR 1430.0048
LYS 1440.0051
HIS 1450.0054
LYS 1460.0045
TRP 1470.0040
GLU 1480.0051
ALA 1490.0047
ALA 1500.0037
HIS 1510.0047
VAL 1520.0039
ALA 1530.0051
GLU 1540.0062
GLN 1550.0056
LEU 1560.0050
ARG 1570.0069
ALA 1580.0078
TYR 1590.0070
LEU 1600.0069
GLU 1610.0097
GLY 1620.0105
THR 1630.0095
CYS 1640.0077
VAL 1650.0091
GLU 1660.0114
TRP 1670.0099
LEU 1680.0077
ARG 1690.0094
ARG 1700.0106
TYR 1710.0084
LEU 1720.0073
GLU 1730.0100
ASN 1740.0110
GLY 1750.0089
LYS 1760.0076
GLU 1770.0085
THR 1780.0078
LEU 1790.0046
GLN 1800.0037
ARG 1810.0074
THR 1820.0072
ASP 1830.0070
ALA 1840.0069
PRO 1850.0067
LYS 1860.0065
THR 1870.0064
HIS 1880.0061
MET 1890.0063
THR 1900.0064
HIS 1910.0084
HIS 1920.0090
ALA 1930.0089
VAL 1940.0082
SER 1950.0086
ASP 1960.0106
HIS 1970.0078
GLU 1980.0066
ALA 1990.0072
THR 2000.0067
LEU 2010.0064
ARG 2020.0059
CYS 2030.0061
TRP 2040.0059
ALA 2050.0063
LEU 2060.0067
SER 2070.0070
PHE 2080.0073
TYR 2090.0078
PRO 2100.0080
ALA 2110.0083
GLU 2120.0082
ILE 2130.0072
THR 2140.0069
LEU 2150.0061
THR 2160.0070
TRP 2170.0067
GLN 2180.0072
ARG 2190.0074
ASP 2200.0084
GLY 2210.0092
GLU 2220.0085
ASP 2230.0078
GLN 2240.0068
THR 2250.0068
GLN 2260.0069
ASP 2270.0066
THR 2280.0064
GLU 2290.0071
LEU 2300.0070
VAL 2310.0054
GLU 2320.0062
THR 2330.0070
ARG 2340.0066
PRO 2350.0078
ALA 2360.0078
GLY 2370.0104
ASP 2380.0108
GLY 2390.0111
THR 2400.0086
PHE 2410.0076
GLN 2420.0065
LYS 2430.0062
TRP 2440.0056
ALA 2450.0058
ALA 2460.0066
VAL 2470.0062
VAL 2480.0067
VAL 2490.0064
PRO 2500.0067
SER 2510.0078
GLY 2520.0085
GLN 2530.0080
GLU 2540.0076
GLN 2550.0083
ARG 2560.0079
TYR 2570.0071
THR 2580.0070
CYS 2590.0067
HIS 2600.0071
VAL 2610.0059
GLN 2620.0069
HIS 2630.0073
GLU 2640.0080
GLY 2650.0072
LEU 2660.0079
PRO 2670.0087
LYS 2680.0086
PRO 2690.0083
LEU 2700.0069
THR 2710.0076
LEU 2720.0072
ARG 2730.0078
TRP 2740.0078
GLU 2750.0091
PRO 2760.0102
GLN 2780.0032
ARG 2790.0033
THR 2800.0032
PRO 2810.0033
LYS 2820.0030
ILE 2830.0030
GLN 2840.0035
VAL 2850.0057
TYR 2860.0060
SER 2870.0080
ARG 2880.0092
HIS 2890.0099
PRO 2900.0090
ALA 2910.0102
GLU 2920.0128
ASN 2930.0167
GLY 2940.0197
LYS 2950.0184
SER 2960.0182
ASN 2970.0149
PHE 2980.0122
LEU 2990.0103
ASN 3000.0081
CYS 3010.0060
TYR 3020.0050
VAL 3030.0043
SER 3040.0044
GLY 3050.0043
PHE 3060.0042
HIS 3070.0045
PRO 3080.0050
SER 3090.0060
ASP 3100.0057
ILE 3110.0054
GLU 3120.0065
VAL 3130.0069
ASP 3140.0097
LEU 3150.0111
LEU 3160.0135
LYS 3170.0165
ASN 3180.0182
GLY 3190.0169
GLU 3200.0178
ARG 3210.0159
ILE 3220.0164
GLU 3230.0156
LYS 3240.0153
VAL 3250.0114
GLU 3260.0111
HIS 3270.0088
SER 3280.0066
ASP 3290.0066
LEU 3300.0067
SER 3310.0063
PHE 3320.0063
SER 3330.0034
LYS 3340.0031
ASP 3350.0039
TRP 3360.0044
SER 3370.0049
PHE 3380.0059
TYR 3390.0057
LEU 3400.0061
LEU 3410.0063
TYR 3420.0066
TYR 3430.0100
THR 3440.0128
GLU 3450.0154
PHE 3460.0158
THR 3470.0173
PRO 3480.0164
THR 3490.0190
GLU 3500.0188
LYS 3510.0213
ASP 3520.0196
GLU 3530.0161
TYR 3540.0133
ALA 3550.0108
CYS 3560.0084
ARG 3570.0084
VAL 3580.0060
ASN 3590.0051
HIS 3600.0036
VAL 3610.0025
THR 3620.0012
LEU 3630.0026
SER 3640.0034
GLN 3650.0050
PRO 3660.0061
LYS 3670.0061
ILE 3680.0095
VAL 3690.0081
LYS 3700.0097
TRP 3710.0086
ASP 3720.0080
ARG 3730.0067
ASP 3740.0056
MET 3750.0048
SER 10.0030
GLN 20.0026
PHE 30.0029
ARG 40.0032
VAL 50.0038
SER 60.0045
PRO 70.0048
LEU 80.0047
ASP 90.0052
ARG 100.0053
THR 110.0051
TRP 120.0053
ASN 130.0056
LEU 140.0060
GLY 150.0058
GLU 160.0055
THR 170.0053
VAL 180.0051
GLU 190.0049
LEU 200.0047
LYS 210.0045
CYS 220.0038
GLN 230.0034
VAL 240.0031
LEU 250.0030
LEU 260.0054
SER 270.0056
ASN 280.0057
PRO 290.0051
THR 300.0052
SER 310.0058
GLY 320.0054
CYS 330.0045
SER 340.0038
TRP 350.0032
LEU 360.0023
PHE 370.0019
GLN 380.0011
PRO 390.0009
ARG 400.0014
GLY 410.0093
ALA 420.0114
ALA 430.0097
ALA 440.0069
SER 450.0045
PRO 460.0017
THR 470.0020
PHE 480.0027
LEU 490.0029
LEU 500.0040
TYR 510.0048
LEU 520.0051
SER 530.0060
GLN 540.0067
ASN 550.0066
LYS 560.0067
PRO 570.0055
LYS 580.0053
ALA 590.0043
ALA 600.0044
GLU 610.0053
GLY 620.0049
LEU 630.0045
ASP 640.0050
THR 650.0049
GLN 660.0057
ARG 670.0056
PHE 680.0051
SER 690.0050
GLY 700.0048
LYS 710.0047
ARG 720.0049
LEU 730.0056
GLY 740.0056
ASP 750.0048
THR 760.0047
PHE 770.0045
VAL 780.0047
LEU 790.0044
THR 800.0050
LEU 810.0057
SER 820.0056
ASP 830.0056
PHE 840.0058
ARG 850.0061
ARG 860.0078
GLU 870.0075
ASN 880.0062
GLU 890.0056
GLY 900.0043
TYR 910.0025
TYR 920.0028
PHE 930.0030
CYS 940.0033
SER 950.0031
ALA 960.0050
LEU 970.0058
SER 980.0065
ASN 990.0076
SER 1000.0078
ILE 1010.0066
MET 1020.0053
TYR 1030.0045
PHE 1040.0034
SER 1050.0031
HIS 1060.0023
PHE 1070.0027
VAL 1080.0035
PRO 1090.0040
VAL 1100.0045
PHE 1110.0050
LEU 1120.0057
PRO 1130.0056
ALA 1140.0067
SER 10.0157
GLN 20.0165
PHE 30.0153
ARG 40.0167
VAL 50.0130
SER 60.0134
PRO 70.0121
LEU 80.0151
ASP 90.0177
ARG 100.0134
THR 110.0132
TRP 120.0095
ASN 130.0131
LEU 140.0164
GLY 150.0148
GLU 160.0077
THR 170.0070
VAL 180.0034
GLU 190.0070
LEU 200.0075
LYS 210.0120
CYS 220.0129
GLN 230.0171
VAL 240.0172
LEU 250.0202
LEU 260.0173
SER 270.0208
ASN 280.0205
PRO 290.0184
THR 300.0192
SER 310.0139
GLY 320.0133
CYS 330.0109
SER 340.0086
TRP 350.0070
LEU 360.0033
PHE 370.0031
GLN 380.0053
PRO 390.0096
ARG 400.0126
GLY 410.0084
ALA 420.0043
ALA 430.0032
ALA 440.0046
SER 450.0031
PRO 460.0026
THR 470.0047
PHE 480.0063
LEU 490.0076
LEU 500.0101
TYR 510.0123
LEU 520.0142
SER 530.0145
GLN 540.0164
ASN 550.0169
LYS 560.0177
PRO 570.0149
LYS 580.0133
ALA 590.0120
ALA 600.0102
GLU 610.0117
GLY 620.0172
LEU 630.0162
ASP 640.0217
THR 650.0222
GLN 660.0253
ARG 670.0195
PHE 680.0165
SER 690.0181
GLY 700.0177
LYS 710.0188
ARG 720.0199
LEU 730.0223
GLY 740.0238
ASP 750.0207
THR 760.0184
PHE 770.0153
VAL 780.0134
LEU 790.0102
THR 800.0110
LEU 810.0116
SER 820.0136
ASP 830.0149
PHE 840.0127
ARG 850.0186
ARG 860.0217
GLU 870.0217
ASN 880.0143
GLU 890.0141
GLY 900.0115
TYR 910.0058
TYR 920.0015
PHE 930.0034
CYS 940.0065
SER 950.0079
ALA 960.0096
LEU 970.0090
SER 980.0098
ASN 990.0088
SER 1000.0068
ILE 1010.0070
MET 1020.0057
TYR 1030.0065
PHE 1040.0059
SER 1050.0080
HIS 1060.0099
PHE 1070.0075
VAL 1080.0073
PRO 1090.0095
VAL 1100.0079
PHE 1110.0141
LEU 1120.0183
PRO 1130.0230
ALA 1140.0297

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.