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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0568
MET 10.0094
SER 20.0083
THR 30.0098
ILE 40.0055
THR 50.0186
LYS 60.0205
ASP 70.0168
GLN 80.0058
ILE 90.0098
LEU 100.0113
GLU 110.0039
GLY 120.0084
VAL 130.0142
ALA 140.0169
ALA 150.0205
LEU 160.0226
SER 170.0279
VAL 180.0284
MET 190.0222
GLU 200.0156
ILE 210.0155
VAL 220.0148
GLU 230.0075
LEU 240.0081
ILE 250.0146
SER 260.0118
ALA 270.0143
MET 280.0135
GLU 290.0113
GLU 300.0130
LYS 310.0193
PHE 320.0152
GLY 330.0138
VAL 340.0085
SER 350.0065
ALA 360.0227
ALA 370.0206
ALA 380.0243
VAL 390.0328
ALA 400.0366
ALA 410.0283
GLY 420.0391
PRO 430.0505
ALA 440.0432
ALA 450.0304
ALA 460.0406
VAL 470.0360
GLU 480.0169
ALA 490.0277
ALA 500.0282
GLU 510.0099
GLU 520.0077
GLN 530.0073
THR 540.0077
GLU 550.0073
PHE 560.0079
ASP 570.0095
VAL 580.0099
VAL 590.0107
LEU 600.0115
ALA 610.0112
SER 620.0124
PHE 630.0133
GLY 640.0133
GLU 650.0146
ASN 660.0147
LYS 670.0164
VAL 680.0176
ALA 690.0157
VAL 700.0149
ILE 710.0167
LYS 720.0171
ALA 730.0154
VAL 740.0161
ARG 750.0184
GLY 760.0183
ALA 770.0170
THR 780.0182
GLY 790.0201
LEU 800.0207
GLY 810.0219
LEU 820.0207
LYS 830.0216
GLU 840.0204
ALA 850.0179
LYS 860.0160
ASP 870.0169
LEU 880.0150
VAL 890.0133
GLU 900.0145
SER 910.0116
ALA 920.0105
PRO 930.0106
ALA 940.0117
VAL 950.0123
LEU 960.0137
LYS 970.0133
GLU 980.0126
GLY 990.0113
VAL 1000.0108
ASN 1010.0095
LYS 1020.0075
ASP 1030.0091
GLU 1040.0111
ALA 1050.0098
GLU 1060.0088
THR 1070.0111
LEU 1080.0120
LYS 1090.0100
LYS 1100.0102
SER 1110.0125
LEU 1120.0124
GLU 1130.0104
GLU 1140.0114
ALA 1150.0132
GLY 1160.0118
ALA 1170.0118
SER 1180.0106
VAL 1190.0101
GLU 1200.0091
ILE 1210.0076
LYS 1220.0071
GLU 1230.0057
ALA 1240.0060
ALA 1250.0064
ALA 1260.0037
LYS 1270.0046
ALA 1280.0040
TYR 1290.0054
LYS 1300.0054
ILE 1310.0100
ILE 1320.0106
SER 1330.0116
LEU 1340.0121
LYS 1350.0131
TYR 1360.0126
THR 1370.0101
ARG 1380.0099
LYS 1390.0078
VAL 1400.0073
CYS 1410.0082
ILE 1420.0062
GLY 1430.0075
PRO 1440.0069
GLY 1450.0091
PRO 1460.0129
GLY 1470.0115
LYS 1480.0080
ALA 1490.0048
TYR 1500.0031
LYS 1510.0026
ILE 1520.0043
ILE 1530.0058
SER 1540.0078
LEU 1550.0098
LYS 1560.0119
TYR 1570.0127
THR 1580.0131
ARG 1590.0140
LYS 1600.0142
VAL 1610.0129
CYS 1620.0136
GLY 1630.0130
PRO 1640.0137
GLY 1650.0161
PRO 1660.0199
GLY 1670.0199
GLY 1680.0193
LYS 1690.0158
ALA 1700.0136
TYR 1710.0134
LYS 1720.0138
ILE 1730.0137
ILE 1740.0143
SER 1750.0145
LEU 1760.0130
LYS 1770.0115
TYR 1780.0092
THR 1790.0077
ARG 1800.0054
LYS 1810.0043
VAL 1820.0021
GLY 1830.0017
PRO 1840.0037
GLY 1850.0057
PRO 1860.0061
GLY 1870.0049
ILE 1880.0066
ILE 1890.0066
SER 1900.0084
LEU 1910.0098
LYS 1920.0105
TYR 1930.0120
THR 1940.0129
ARG 1950.0144
LYS 1960.0133
VAL 1970.0119
CYS 1980.0099
ILE 1990.0087
GLN 2000.0068
LEU 2010.0041
GLY 2020.0043
GLY 2030.0042
PRO 2040.0040
GLY 2050.0041
PRO 2060.0035
GLY 2070.0032
ASN 2080.0027
ILE 2090.0025
LYS 2100.0025
THR 2110.0029
ALA 2120.0023
PHE 2130.0026
HIS 2140.0029
CYS 2150.0023
TYR 2160.0022
ALA 2170.0047
ALA 2180.0052
TYR 2190.0038
MET 2200.0042
THR 2210.0062
SER 2220.0062
ILE 2230.0067
LYS 2240.0064
ALA 2250.0070
CYS 2260.0047
ASP 2270.0028
LEU 2280.0060
LYS 2290.0065
LYS 2300.0095
PRO 2310.0129
LEU 2320.0052
MET 2330.0039
GLU 2340.0086
SER 2350.0116
GLY 2360.0065
TRP 2370.0035
SER 2380.0053
ASP 2390.0057
THR 2400.0094
ALA 2410.0186
HIS 2420.0111
GLY 2430.0088
LYS 2440.0035
LYS 2450.0072
SER 2460.0065
LEU 2470.0050
PRO 2480.0030
SER 2490.0029
SER 2500.0032
SER 2510.0039
SER 2520.0043
TYR 2530.0043
SER 2540.0048
TYR 2550.0049
ARG 2560.0041
ARG 2570.0037
LYS 2580.0031
LEU 2590.0035
THR 2600.0035
ASN 2610.0037
PRO 2620.0046
ALA 2630.0038
ASN 2640.0031
LYS 2650.0027
GLU 2660.0031
GLU 2670.0038
SER 2680.0034
ILE 2690.0029
LYS 2700.0044
LYS 2710.0068
GLN 2720.0055
LYS 2730.0017
TYR 2740.0002
SER 2750.0042
TYR 2760.0073
PRO 2770.0177
TRP 2780.0089
GLN 2790.0220
THR 2800.0319
SER 2810.0079
LYS 2820.0224
CYS 2830.0104
PHE 2840.0376
ASP 2880.0121
TYR 2890.0064
GLN 2900.0089
TYR 2910.0140
CYS 2970.0401
ASN 2980.0346
PRO 2990.0078
GLY 3000.0129
LYS 3010.0067
LYS 3020.0152
ASN 3030.0183
THR 3040.0169
ILE 3050.0215
SER 3060.0257
GLY 3070.0252
TYR 3080.0235
LYS 3090.0195
ARG 3100.0176
MET 3110.0174
MET 3120.0128
ALA 3130.0110
THR 3140.0083
LYS 3150.0057
ASP 3160.0019
SER 3170.0058
PHE 3180.0054
GLN 3190.0065
SER 3200.0061
PHE 3210.0088
ASN 3220.0115
LEU 3230.0149
THR 3240.0182
GLU 3250.0219
PRO 3260.0211
HIS 3270.0247
ILE 3280.0259
THR 3290.0255
THR 3300.0268
ASN 3310.0236
LYS 3320.0231
LEU 3330.0213
GLU 3340.0206
TRP 3350.0194
ILE 3360.0187
ASP 3370.0172
PRO 3380.0188
ASP 3390.0158
GLY 3400.0179
ASN 3410.0161
THR 3420.0132
ARG 3430.0369
GLY 3440.0276
GLY 3450.0568
GLY 3460.0492
GLY 10.0052
SER 20.0046
HIS 30.0042
SER 40.0038
MET 50.0034
ARG 60.0032
TYR 70.0032
PHE 80.0035
PHE 90.0034
THR 100.0038
SER 110.0039
VAL 120.0045
SER 130.0048
ARG 140.0058
PRO 150.0060
GLY 160.0083
ARG 170.0086
GLY 180.0080
GLU 190.0064
PRO 200.0052
ARG 210.0050
PHE 220.0045
ILE 230.0045
ALA 240.0040
VAL 250.0041
GLY 260.0033
TYR 270.0036
VAL 280.0038
ASP 290.0041
ASP 300.0045
THR 310.0052
GLN 320.0048
PHE 330.0043
VAL 340.0040
ARG 350.0044
PHE 360.0049
ASP 370.0054
SER 380.0056
ASP 390.0064
ALA 400.0067
ALA 410.0077
SER 420.0071
GLN 430.0064
ARG 440.0056
MET 450.0049
GLU 460.0051
PRO 470.0050
ARG 480.0056
ALA 490.0056
PRO 500.0057
TRP 510.0052
ILE 520.0046
GLU 530.0052
GLN 540.0049
GLU 550.0042
GLY 560.0040
PRO 570.0045
GLU 580.0038
TYR 590.0036
TRP 600.0043
ASP 610.0045
GLY 620.0038
GLU 630.0039
THR 640.0047
ARG 650.0044
LYS 660.0038
VAL 670.0041
LYS 680.0047
ALA 690.0042
HIS 700.0037
SER 710.0043
GLN 720.0045
THR 730.0038
HIS 740.0037
ARG 750.0044
VAL 760.0041
ASP 770.0036
LEU 780.0039
GLY 790.0041
THR 800.0036
LEU 810.0035
ARG 820.0038
GLY 830.0038
TYR 840.0033
TYR 850.0033
ASN 860.0039
GLN 870.0038
SER 880.0042
GLU 890.0051
ALA 900.0051
GLY 910.0045
SER 920.0044
HIS 930.0037
THR 940.0035
VAL 950.0029
GLN 960.0031
ARG 970.0028
MET 980.0029
TYR 990.0026
GLY 1000.0027
CYS 1010.0030
ASP 1020.0035
VAL 1030.0038
GLY 1040.0043
SER 1050.0049
ASP 1060.0048
TRP 1070.0043
ARG 1080.0037
PHE 1090.0032
LEU 1100.0033
ARG 1110.0028
GLY 1120.0026
TYR 1130.0025
HIS 1140.0024
GLN 1150.0026
TYR 1160.0024
ALA 1170.0026
TYR 1180.0028
ASP 1190.0032
GLY 1200.0033
LYS 1210.0027
ASP 1220.0024
TYR 1230.0022
ILE 1240.0020
ALA 1250.0021
LEU 1260.0021
LYS 1270.0020
GLU 1280.0023
ASP 1290.0020
LEU 1300.0020
ARG 1310.0015
SER 1320.0013
TRP 1330.0015
THR 1340.0016
ALA 1350.0017
ALA 1360.0019
ASP 1370.0019
MET 1380.0019
ALA 1390.0023
ALA 1400.0023
GLN 1410.0017
THR 1420.0021
THR 1430.0021
LYS 1440.0016
HIS 1450.0015
LYS 1460.0019
TRP 1470.0017
GLU 1480.0012
ALA 1490.0013
ALA 1500.0016
HIS 1510.0013
VAL 1520.0017
ALA 1530.0016
GLU 1540.0015
GLN 1550.0019
LEU 1560.0019
ARG 1570.0019
ALA 1580.0018
TYR 1590.0021
LEU 1600.0023
GLU 1610.0023
GLY 1620.0023
THR 1630.0023
CYS 1640.0027
VAL 1650.0030
GLU 1660.0028
TRP 1670.0029
LEU 1680.0035
ARG 1690.0038
ARG 1700.0036
TYR 1710.0041
LEU 1720.0046
GLU 1730.0048
ASN 1740.0048
GLY 1750.0053
LYS 1760.0057
GLU 1770.0063
THR 1780.0059
LEU 1790.0052
GLN 1800.0052
ARG 1810.0039
THR 1820.0038
ASP 1830.0037
ALA 1840.0036
PRO 1850.0036
LYS 1860.0050
THR 1870.0050
HIS 1880.0051
MET 1890.0051
THR 1900.0051
HIS 1910.0060
HIS 1920.0066
ALA 1930.0063
VAL 1940.0066
SER 1950.0069
ASP 1960.0075
HIS 1970.0058
GLU 1980.0057
ALA 1990.0055
THR 2000.0056
LEU 2010.0047
ARG 2020.0046
CYS 2030.0046
TRP 2040.0046
ALA 2050.0046
LEU 2060.0034
SER 2070.0035
PHE 2080.0035
TYR 2090.0037
PRO 2100.0038
ALA 2110.0038
GLU 2120.0039
ILE 2130.0039
THR 2140.0040
LEU 2150.0041
THR 2160.0041
TRP 2170.0040
GLN 2180.0034
ARG 2190.0032
ASP 2200.0028
GLY 2210.0030
GLU 2220.0028
ASP 2230.0032
GLN 2240.0035
THR 2250.0032
GLN 2260.0035
ASP 2270.0040
THR 2280.0043
GLU 2290.0052
LEU 2300.0055
VAL 2310.0037
GLU 2320.0033
THR 2330.0031
ARG 2340.0022
PRO 2350.0018
ALA 2360.0015
GLY 2370.0012
ASP 2380.0017
GLY 2390.0025
THR 2400.0025
PHE 2410.0034
GLN 2420.0034
LYS 2430.0037
TRP 2440.0039
ALA 2450.0043
ALA 2460.0057
VAL 2470.0048
VAL 2480.0056
VAL 2490.0048
PRO 2500.0053
SER 2510.0051
GLY 2520.0044
GLN 2530.0040
GLU 2540.0044
GLN 2550.0039
ARG 2560.0036
TYR 2570.0040
THR 2580.0041
CYS 2590.0045
HIS 2600.0044
VAL 2610.0042
GLN 2620.0042
HIS 2630.0041
GLU 2640.0041
GLY 2650.0040
LEU 2660.0046
PRO 2670.0048
LYS 2680.0050
PRO 2690.0048
LEU 2700.0049
THR 2710.0048
LEU 2720.0051
ARG 2730.0050
TRP 2740.0052
GLU 2750.0053
PRO 2760.0060
GLN 2780.0016
ARG 2790.0012
THR 2800.0012
PRO 2810.0013
LYS 2820.0018
ILE 2830.0021
GLN 2840.0019
VAL 2850.0024
TYR 2860.0019
SER 2870.0018
ARG 2880.0013
HIS 2890.0017
PRO 2900.0016
ALA 2910.0028
GLU 2920.0038
ASN 2930.0056
GLY 2940.0068
LYS 2950.0059
SER 2960.0058
ASN 2970.0043
PHE 2980.0035
LEU 2990.0033
ASN 3000.0025
CYS 3010.0024
TYR 3020.0016
VAL 3030.0020
SER 3040.0019
GLY 3050.0020
PHE 3060.0020
HIS 3070.0021
PRO 3080.0028
SER 3090.0030
ASP 3100.0026
ILE 3110.0029
GLU 3120.0036
VAL 3130.0039
ASP 3140.0048
LEU 3150.0051
LEU 3160.0061
LYS 3170.0068
ASN 3180.0076
GLY 3190.0076
GLU 3200.0078
ARG 3210.0072
ILE 3220.0068
GLU 3230.0072
LYS 3240.0062
VAL 3250.0048
GLU 3260.0036
HIS 3270.0025
SER 3280.0037
ASP 3290.0038
LEU 3300.0034
SER 3310.0035
PHE 3320.0032
SER 3330.0034
LYS 3340.0030
ASP 3350.0030
TRP 3360.0028
SER 3370.0035
PHE 3380.0026
TYR 3390.0022
LEU 3400.0020
LEU 3410.0021
TYR 3420.0025
TYR 3430.0031
THR 3440.0044
GLU 3450.0052
PHE 3460.0056
THR 3470.0062
PRO 3480.0057
THR 3490.0068
GLU 3500.0070
LYS 3510.0081
ASP 3520.0075
GLU 3530.0066
TYR 3540.0058
ALA 3550.0053
CYS 3560.0046
ARG 3570.0049
VAL 3580.0050
ASN 3590.0042
HIS 3600.0033
VAL 3610.0027
THR 3620.0031
LEU 3630.0069
SER 3640.0072
GLN 3650.0068
PRO 3660.0066
LYS 3670.0072
ILE 3680.0052
VAL 3690.0044
LYS 3700.0048
TRP 3710.0040
ASP 3720.0038
ARG 3730.0014
ASP 3740.0028
MET 3750.0037
SER 10.0032
GLN 20.0039
PHE 30.0040
ARG 40.0041
VAL 50.0041
SER 60.0043
PRO 70.0043
LEU 80.0034
ASP 90.0041
ARG 100.0053
THR 110.0064
TRP 120.0077
ASN 130.0095
LEU 140.0107
GLY 150.0116
GLU 160.0092
THR 170.0087
VAL 180.0073
GLU 190.0068
LEU 200.0057
LYS 210.0053
CYS 220.0046
GLN 230.0050
VAL 240.0048
LEU 250.0049
LEU 260.0048
SER 270.0052
ASN 280.0049
PRO 290.0044
THR 300.0041
SER 310.0043
GLY 320.0044
CYS 330.0042
SER 340.0035
TRP 350.0040
LEU 360.0043
PHE 370.0044
GLN 380.0050
PRO 390.0050
ARG 400.0056
GLY 410.0111
ALA 420.0141
ALA 430.0140
ALA 440.0108
SER 450.0097
PRO 460.0053
THR 470.0047
PHE 480.0038
LEU 490.0039
LEU 500.0037
TYR 510.0035
LEU 520.0044
SER 530.0047
GLN 540.0052
ASN 550.0046
LYS 560.0047
PRO 570.0044
LYS 580.0034
ALA 590.0035
ALA 600.0030
GLU 610.0035
GLY 620.0058
LEU 630.0059
ASP 640.0084
THR 650.0088
GLN 660.0102
ARG 670.0091
PHE 680.0082
SER 690.0083
GLY 700.0076
LYS 710.0071
ARG 720.0071
LEU 730.0080
GLY 740.0080
ASP 750.0067
THR 760.0065
PHE 770.0063
VAL 780.0066
LEU 790.0063
THR 800.0073
LEU 810.0083
SER 820.0087
ASP 830.0091
PHE 840.0084
ARG 850.0090
ARG 860.0077
GLU 870.0085
ASN 880.0074
GLU 890.0058
GLY 900.0055
TYR 910.0050
TYR 920.0048
PHE 930.0045
CYS 940.0045
SER 950.0043
ALA 960.0035
LEU 970.0035
SER 980.0051
ASN 990.0059
SER 1000.0049
ILE 1010.0045
MET 1020.0031
TYR 1030.0039
PHE 1040.0039
SER 1050.0055
HIS 1060.0042
PHE 1070.0042
VAL 1080.0046
PRO 1090.0047
VAL 1100.0053
PHE 1110.0058
LEU 1120.0073
PRO 1130.0086
ALA 1140.0086
SER 10.0188
GLN 20.0178
PHE 30.0166
ARG 40.0189
VAL 50.0150
SER 60.0157
PRO 70.0147
LEU 80.0178
ASP 90.0201
ARG 100.0148
THR 110.0130
TRP 120.0073
ASN 130.0100
LEU 140.0142
GLY 150.0138
GLU 160.0069
THR 170.0084
VAL 180.0044
GLU 190.0090
LEU 200.0087
LYS 210.0131
CYS 220.0136
GLN 230.0181
VAL 240.0173
LEU 250.0213
LEU 260.0168
SER 270.0203
ASN 280.0189
PRO 290.0169
THR 300.0170
SER 310.0104
GLY 320.0104
CYS 330.0081
SER 340.0052
TRP 350.0043
LEU 360.0014
PHE 370.0052
GLN 380.0087
PRO 390.0126
ARG 400.0159
GLY 410.0110
ALA 420.0071
ALA 430.0049
ALA 440.0074
SER 450.0059
PRO 460.0066
THR 470.0060
PHE 480.0050
LEU 490.0062
LEU 500.0081
TYR 510.0097
LEU 520.0123
SER 530.0129
GLN 540.0157
ASN 550.0164
LYS 560.0177
PRO 570.0142
LYS 580.0124
ALA 590.0116
ALA 600.0102
GLU 610.0142
GLY 620.0205
LEU 630.0183
ASP 640.0235
THR 650.0231
GLN 660.0271
ARG 670.0208
PHE 680.0170
SER 690.0185
GLY 700.0176
LYS 710.0192
ARG 720.0203
LEU 730.0238
GLY 740.0252
ASP 750.0216
THR 760.0194
PHE 770.0153
VAL 780.0139
LEU 790.0101
THR 800.0119
LEU 810.0121
SER 820.0151
ASP 830.0155
PHE 840.0121
ARG 850.0183
ARG 860.0215
GLU 870.0224
ASN 880.0145
GLU 890.0149
GLY 900.0139
TYR 910.0086
TYR 920.0042
PHE 930.0047
CYS 940.0052
SER 950.0052
ALA 960.0061
LEU 970.0045
SER 980.0052
ASN 990.0030
SER 1000.0013
ILE 1010.0025
MET 1020.0027
TYR 1030.0055
PHE 1040.0066
SER 1050.0094
HIS 1060.0127
PHE 1070.0108
VAL 1080.0097
PRO 1090.0118
VAL 1100.0090
PHE 1110.0143
LEU 1120.0172
PRO 1130.0217
ALA 1140.0293

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.