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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0804
MET 10.0148
SER 20.0135
THR 30.0159
ILE 40.0089
THR 50.0299
LYS 60.0331
ASP 70.0268
GLN 80.0090
ILE 90.0163
LEU 100.0186
GLU 110.0068
GLY 120.0139
VAL 130.0234
ALA 140.0275
ALA 150.0331
LEU 160.0361
SER 170.0442
VAL 180.0452
MET 190.0352
GLU 200.0248
ILE 210.0250
VAL 220.0238
GLU 230.0125
LEU 240.0135
ILE 250.0236
SER 260.0193
ALA 270.0235
MET 280.0217
GLU 290.0180
GLU 300.0212
LYS 310.0319
PHE 320.0257
GLY 330.0238
VAL 340.0160
SER 350.0127
ALA 360.0381
ALA 370.0332
ALA 380.0381
VAL 390.0512
ALA 400.0548
ALA 410.0390
GLY 420.0564
PRO 430.0804
ALA 440.0677
ALA 450.0450
ALA 460.0703
VAL 470.0626
GLU 480.0289
ALA 490.0575
ALA 500.0648
GLU 510.0301
GLU 520.0243
GLN 530.0201
THR 540.0140
GLU 550.0102
PHE 560.0113
ASP 570.0122
VAL 580.0110
VAL 590.0144
LEU 600.0155
ALA 610.0171
SER 620.0182
PHE 630.0183
GLY 640.0189
GLU 650.0209
ASN 660.0200
LYS 670.0205
VAL 680.0200
ALA 690.0173
VAL 700.0165
ILE 710.0172
LYS 720.0154
ALA 730.0129
VAL 740.0141
ARG 750.0149
GLY 760.0105
ALA 770.0096
THR 780.0133
GLY 790.0142
LEU 800.0181
GLY 810.0226
LEU 820.0227
LYS 830.0260
GLU 840.0242
ALA 850.0202
LYS 860.0206
ASP 870.0211
LEU 880.0195
VAL 890.0176
GLU 900.0182
SER 910.0179
ALA 920.0163
PRO 930.0157
ALA 940.0161
VAL 950.0155
LEU 960.0125
LYS 970.0100
GLU 980.0118
GLY 990.0114
VAL 1000.0080
ASN 1010.0083
LYS 1020.0079
ASP 1030.0048
GLU 1040.0039
ALA 1050.0064
GLU 1060.0059
THR 1070.0051
LEU 1080.0072
LYS 1090.0092
LYS 1100.0089
SER 1110.0099
LEU 1120.0122
GLU 1130.0129
GLU 1140.0136
ALA 1150.0154
GLY 1160.0167
ALA 1170.0159
SER 1180.0156
VAL 1190.0135
GLU 1200.0136
ILE 1210.0122
LYS 1220.0145
GLU 1230.0147
ALA 1240.0138
ALA 1250.0171
ALA 1260.0096
LYS 1270.0078
ALA 1280.0055
TYR 1290.0036
LYS 1300.0019
ILE 1310.0037
ILE 1320.0037
SER 1330.0033
LEU 1340.0033
LYS 1350.0030
TYR 1360.0040
THR 1370.0041
ARG 1380.0039
LYS 1390.0046
VAL 1400.0042
CYS 1410.0052
ILE 1420.0051
GLY 1430.0051
PRO 1440.0049
GLY 1450.0049
PRO 1460.0049
GLY 1470.0058
LYS 1480.0063
ALA 1490.0064
TYR 1500.0057
LYS 1510.0053
ILE 1520.0051
ILE 1530.0052
SER 1540.0051
LEU 1550.0051
LYS 1560.0045
TYR 1570.0048
THR 1580.0050
ARG 1590.0054
LYS 1600.0057
VAL 1610.0072
CYS 1620.0080
GLY 1630.0100
PRO 1640.0103
GLY 1650.0106
PRO 1660.0141
GLY 1670.0119
GLY 1680.0110
LYS 1690.0082
ALA 1700.0081
TYR 1710.0069
LYS 1720.0060
ILE 1730.0053
ILE 1740.0046
SER 1750.0040
LEU 1760.0055
LYS 1770.0056
TYR 1780.0057
THR 1790.0058
ARG 1800.0059
LYS 1810.0066
VAL 1820.0066
GLY 1830.0067
PRO 1840.0064
GLY 1850.0061
PRO 1860.0056
GLY 1870.0052
ILE 1880.0051
ILE 1890.0050
SER 1900.0050
LEU 1910.0038
LYS 1920.0039
TYR 1930.0039
THR 1940.0042
ARG 1950.0045
LYS 1960.0043
VAL 1970.0047
CYS 1980.0044
ILE 1990.0045
GLN 2000.0045
LEU 2010.0047
GLY 2020.0050
GLY 2030.0039
PRO 2040.0034
GLY 2050.0044
PRO 2060.0042
GLY 2070.0045
ASN 2080.0047
ILE 2090.0046
LYS 2100.0048
THR 2110.0042
ALA 2120.0044
PHE 2130.0045
HIS 2140.0037
CYS 2150.0032
TYR 2160.0041
ALA 2170.0052
ALA 2180.0035
TYR 2190.0034
MET 2200.0061
THR 2210.0079
SER 2220.0087
ILE 2230.0112
LYS 2240.0130
ALA 2250.0155
CYS 2260.0157
ASP 2270.0119
LEU 2280.0080
LYS 2290.0086
LYS 2300.0143
PRO 2310.0192
LEU 2320.0091
MET 2330.0068
GLU 2340.0147
SER 2350.0180
GLY 2360.0105
TRP 2370.0062
SER 2380.0074
ASP 2390.0071
THR 2400.0121
ALA 2410.0263
HIS 2420.0157
GLY 2430.0121
LYS 2440.0038
LYS 2450.0086
SER 2460.0078
LEU 2470.0060
PRO 2480.0049
SER 2490.0044
SER 2500.0037
SER 2510.0043
SER 2520.0051
TYR 2530.0054
SER 2540.0062
TYR 2550.0066
ARG 2560.0052
ARG 2570.0047
LYS 2580.0041
LEU 2590.0049
THR 2600.0051
ASN 2610.0055
PRO 2620.0067
ALA 2630.0062
ASN 2640.0052
LYS 2650.0043
GLU 2660.0043
GLU 2670.0050
SER 2680.0040
ILE 2690.0036
LYS 2700.0055
LYS 2710.0084
GLN 2720.0067
LYS 2730.0023
TYR 2740.0009
SER 2750.0042
TYR 2760.0082
PRO 2770.0171
TRP 2780.0113
GLN 2790.0225
THR 2800.0318
SER 2810.0099
LYS 2820.0228
CYS 2830.0127
PHE 2840.0403
ASP 2880.0155
TYR 2890.0075
GLN 2900.0068
TYR 2910.0056
CYS 2970.0136
ASN 2980.0087
PRO 2990.0109
GLY 3000.0103
LYS 3010.0131
LYS 3020.0132
ASN 3030.0131
THR 3040.0184
ILE 3050.0130
SER 3060.0146
GLY 3070.0121
TYR 3080.0098
LYS 3090.0039
ARG 3100.0034
MET 3110.0104
MET 3120.0073
ALA 3130.0114
THR 3140.0162
LYS 3150.0149
ASP 3160.0209
SER 3170.0237
PHE 3180.0199
GLN 3190.0179
SER 3200.0117
PHE 3210.0117
ASN 3220.0097
LEU 3230.0103
THR 3240.0102
GLU 3250.0103
PRO 3260.0127
HIS 3270.0222
ILE 3280.0305
THR 3290.0399
THR 3300.0495
ASN 3310.0499
LYS 3320.0417
LEU 3330.0316
GLU 3340.0265
TRP 3350.0183
ILE 3360.0185
ASP 3370.0152
PRO 3380.0117
ASP 3390.0063
GLY 3400.0086
ASN 3410.0066
THR 3420.0113
ARG 3430.0109
GLY 3440.0184
GLY 3450.0339
GLY 3460.0298
GLY 10.0052
SER 20.0047
HIS 30.0040
SER 40.0035
MET 50.0029
ARG 60.0027
TYR 70.0023
PHE 80.0023
PHE 90.0021
THR 100.0021
SER 110.0027
VAL 120.0029
SER 130.0028
ARG 140.0038
PRO 150.0042
GLY 160.0073
ARG 170.0074
GLY 180.0068
GLU 190.0049
PRO 200.0030
ARG 210.0027
PHE 220.0025
ILE 230.0023
ALA 240.0022
VAL 250.0023
GLY 260.0024
TYR 270.0026
VAL 280.0029
ASP 290.0031
ASP 300.0031
THR 310.0038
GLN 320.0031
PHE 330.0029
VAL 340.0026
ARG 350.0026
PHE 360.0031
ASP 370.0033
SER 380.0038
ASP 390.0043
ALA 400.0049
ALA 410.0064
SER 420.0062
GLN 430.0056
ARG 440.0050
MET 450.0040
GLU 460.0042
PRO 470.0041
ARG 480.0042
ALA 490.0046
PRO 500.0054
TRP 510.0049
ILE 520.0041
GLU 530.0052
GLN 540.0055
GLU 550.0046
GLY 560.0053
PRO 570.0060
GLU 580.0056
TYR 590.0044
TRP 600.0048
ASP 610.0055
GLY 620.0047
GLU 630.0038
THR 640.0046
ARG 650.0051
LYS 660.0039
VAL 670.0033
LYS 680.0042
ALA 690.0045
HIS 700.0035
SER 710.0030
GLN 720.0039
THR 730.0040
HIS 740.0031
ARG 750.0033
VAL 760.0032
ASP 770.0031
LEU 780.0026
GLY 790.0029
THR 800.0034
LEU 810.0026
ARG 820.0022
GLY 830.0026
TYR 840.0031
TYR 850.0027
ASN 860.0019
GLN 870.0027
SER 880.0042
GLU 890.0052
ALA 900.0064
GLY 910.0036
SER 920.0034
HIS 930.0029
THR 940.0032
VAL 950.0032
GLN 960.0025
ARG 970.0027
MET 980.0029
TYR 990.0031
GLY 1000.0033
CYS 1010.0039
ASP 1020.0045
VAL 1030.0044
GLY 1040.0052
SER 1050.0053
ASP 1060.0050
TRP 1070.0042
ARG 1080.0043
PHE 1090.0046
LEU 1100.0056
ARG 1110.0058
GLY 1120.0049
TYR 1130.0046
HIS 1140.0040
GLN 1150.0040
TYR 1160.0037
ALA 1170.0035
TYR 1180.0031
ASP 1190.0030
GLY 1200.0037
LYS 1210.0042
ASP 1220.0045
TYR 1230.0042
ILE 1240.0046
ALA 1250.0050
LEU 1260.0054
LYS 1270.0069
GLU 1280.0073
ASP 1290.0078
LEU 1300.0065
ARG 1310.0079
SER 1320.0077
TRP 1330.0066
THR 1340.0067
ALA 1350.0059
ALA 1360.0056
ASP 1370.0048
MET 1380.0044
ALA 1390.0036
ALA 1400.0041
GLN 1410.0058
THR 1420.0053
THR 1430.0046
LYS 1440.0060
HIS 1450.0068
LYS 1460.0063
TRP 1470.0061
GLU 1480.0077
ALA 1490.0083
ALA 1500.0073
HIS 1510.0076
VAL 1520.0058
ALA 1530.0062
GLU 1540.0069
GLN 1550.0055
LEU 1560.0046
ARG 1570.0055
ALA 1580.0050
TYR 1590.0036
LEU 1600.0041
GLU 1610.0045
GLY 1620.0036
THR 1630.0027
CYS 1640.0026
VAL 1650.0031
GLU 1660.0022
TRP 1670.0021
LEU 1680.0026
ARG 1690.0029
ARG 1700.0027
TYR 1710.0030
LEU 1720.0036
GLU 1730.0040
ASN 1740.0042
GLY 1750.0044
LYS 1760.0049
GLU 1770.0050
THR 1780.0041
LEU 1790.0036
GLN 1800.0043
ARG 1810.0011
THR 1820.0012
ASP 1830.0016
ALA 1840.0019
PRO 1850.0023
LYS 1860.0030
THR 1870.0028
HIS 1880.0032
MET 1890.0032
THR 1900.0037
HIS 1910.0037
HIS 1920.0040
ALA 1930.0041
VAL 1940.0041
SER 1950.0042
ASP 1960.0039
HIS 1970.0034
GLU 1980.0032
ALA 1990.0033
THR 2000.0032
LEU 2010.0029
ARG 2020.0029
CYS 2030.0026
TRP 2040.0029
ALA 2050.0027
LEU 2060.0030
SER 2070.0026
PHE 2080.0019
TYR 2090.0014
PRO 2100.0011
ALA 2110.0019
GLU 2120.0016
ILE 2130.0016
THR 2140.0015
LEU 2150.0017
THR 2160.0018
TRP 2170.0018
GLN 2180.0017
ARG 2190.0017
ASP 2200.0016
GLY 2210.0018
GLU 2220.0022
ASP 2230.0025
GLN 2240.0029
THR 2250.0033
GLN 2260.0034
ASP 2270.0032
THR 2280.0031
GLU 2290.0032
LEU 2300.0031
VAL 2310.0031
GLU 2320.0028
THR 2330.0024
ARG 2340.0026
PRO 2350.0026
ALA 2360.0026
GLY 2370.0026
ASP 2380.0027
GLY 2390.0026
THR 2400.0025
PHE 2410.0025
GLN 2420.0027
LYS 2430.0025
TRP 2440.0026
ALA 2450.0025
ALA 2460.0027
VAL 2470.0026
VAL 2480.0027
VAL 2490.0025
PRO 2500.0025
SER 2510.0030
GLY 2520.0027
GLN 2530.0023
GLU 2540.0024
GLN 2550.0022
ARG 2560.0018
TYR 2570.0019
THR 2580.0017
CYS 2590.0018
HIS 2600.0015
VAL 2610.0014
GLN 2620.0011
HIS 2630.0012
GLU 2640.0011
GLY 2650.0014
LEU 2660.0014
PRO 2670.0013
LYS 2680.0012
PRO 2690.0010
LEU 2700.0014
THR 2710.0018
LEU 2720.0022
ARG 2730.0023
TRP 2740.0027
GLU 2750.0029
PRO 2760.0033
GLN 2780.0043
ARG 2790.0035
THR 2800.0041
PRO 2810.0038
LYS 2820.0041
ILE 2830.0042
GLN 2840.0042
VAL 2850.0046
TYR 2860.0046
SER 2870.0048
ARG 2880.0045
HIS 2890.0053
PRO 2900.0060
ALA 2910.0070
GLU 2920.0081
ASN 2930.0093
GLY 2940.0099
LYS 2950.0089
SER 2960.0081
ASN 2970.0067
PHE 2980.0054
LEU 2990.0053
ASN 3000.0044
CYS 3010.0042
TYR 3020.0034
VAL 3030.0031
SER 3040.0026
GLY 3050.0026
PHE 3060.0029
HIS 3070.0029
PRO 3080.0020
SER 3090.0016
ASP 3100.0021
ILE 3110.0025
GLU 3120.0030
VAL 3130.0038
ASP 3140.0046
LEU 3150.0052
LEU 3160.0063
LYS 3170.0072
ASN 3180.0083
GLY 3190.0079
GLU 3200.0077
ARG 3210.0067
ILE 3220.0063
GLU 3230.0065
LYS 3240.0055
VAL 3250.0046
GLU 3260.0034
HIS 3270.0023
SER 3280.0020
ASP 3290.0016
LEU 3300.0016
SER 3310.0016
PHE 3320.0019
SER 3330.0026
LYS 3340.0030
ASP 3350.0035
TRP 3360.0030
SER 3370.0031
PHE 3380.0021
TYR 3390.0020
LEU 3400.0023
LEU 3410.0027
TYR 3420.0033
TYR 3430.0042
THR 3440.0053
GLU 3450.0062
PHE 3460.0072
THR 3470.0082
PRO 3480.0084
THR 3490.0094
GLU 3500.0100
LYS 3510.0101
ASP 3520.0091
GLU 3530.0078
TYR 3540.0067
ALA 3550.0061
CYS 3560.0051
ARG 3570.0052
VAL 3580.0034
ASN 3590.0034
HIS 3600.0039
VAL 3610.0044
THR 3620.0049
LEU 3630.0086
SER 3640.0087
GLN 3650.0060
PRO 3660.0036
LYS 3670.0038
ILE 3680.0056
VAL 3690.0056
LYS 3700.0059
TRP 3710.0058
ASP 3720.0059
ARG 3730.0061
ASP 3740.0057
MET 3750.0049
SER 10.0040
GLN 20.0043
PHE 30.0043
ARG 40.0045
VAL 50.0043
SER 60.0051
PRO 70.0054
LEU 80.0045
ASP 90.0057
ARG 100.0060
THR 110.0068
TRP 120.0072
ASN 130.0083
LEU 140.0082
GLY 150.0082
GLU 160.0077
THR 170.0067
VAL 180.0056
GLU 190.0056
LEU 200.0047
LYS 210.0046
CYS 220.0044
GLN 230.0049
VAL 240.0048
LEU 250.0050
LEU 260.0042
SER 270.0038
ASN 280.0037
PRO 290.0038
THR 300.0036
SER 310.0044
GLY 320.0042
CYS 330.0037
SER 340.0030
TRP 350.0027
LEU 360.0018
PHE 370.0016
GLN 380.0019
PRO 390.0030
ARG 400.0039
GLY 410.0026
ALA 420.0032
ALA 430.0030
ALA 440.0023
SER 450.0021
PRO 460.0016
THR 470.0016
PHE 480.0017
LEU 490.0020
LEU 500.0026
TYR 510.0034
LEU 520.0037
SER 530.0041
GLN 540.0046
ASN 550.0044
LYS 560.0045
PRO 570.0037
LYS 580.0031
ALA 590.0024
ALA 600.0020
GLU 610.0021
GLY 620.0019
LEU 630.0019
ASP 640.0025
THR 650.0028
GLN 660.0036
ARG 670.0039
PHE 680.0033
SER 690.0039
GLY 700.0045
LYS 710.0050
ARG 720.0056
LEU 730.0064
GLY 740.0067
ASP 750.0060
THR 760.0059
PHE 770.0050
VAL 780.0049
LEU 790.0041
THR 800.0044
LEU 810.0046
SER 820.0057
ASP 830.0063
PHE 840.0061
ARG 850.0063
ARG 860.0068
GLU 870.0056
ASN 880.0045
GLU 890.0051
GLY 900.0040
TYR 910.0026
TYR 920.0025
PHE 930.0024
CYS 940.0030
SER 950.0032
ALA 960.0038
LEU 970.0038
SER 980.0039
ASN 990.0040
SER 1000.0039
ILE 1010.0039
MET 1020.0035
TYR 1030.0036
PHE 1040.0034
SER 1050.0036
HIS 1060.0030
PHE 1070.0024
VAL 1080.0035
PRO 1090.0038
VAL 1100.0045
PHE 1110.0064
LEU 1120.0080
PRO 1130.0096
ALA 1140.0105
SER 10.0025
GLN 20.0027
PHE 30.0030
ARG 40.0035
VAL 50.0033
SER 60.0038
PRO 70.0039
LEU 80.0038
ASP 90.0045
ARG 100.0039
THR 110.0032
TRP 120.0026
ASN 130.0022
LEU 140.0019
GLY 150.0027
GLU 160.0030
THR 170.0035
VAL 180.0030
GLU 190.0035
LEU 200.0031
LYS 210.0035
CYS 220.0032
GLN 230.0037
VAL 240.0034
LEU 250.0035
LEU 260.0032
SER 270.0036
ASN 280.0037
PRO 290.0035
THR 300.0038
SER 310.0034
GLY 320.0036
CYS 330.0030
SER 340.0029
TRP 350.0025
LEU 360.0022
PHE 370.0019
GLN 380.0019
PRO 390.0021
ARG 400.0025
GLY 410.0016
ALA 420.0015
ALA 430.0016
ALA 440.0014
SER 450.0018
PRO 460.0026
THR 470.0029
PHE 480.0031
LEU 490.0032
LEU 500.0035
TYR 510.0037
LEU 520.0036
SER 530.0034
GLN 540.0035
ASN 550.0040
LYS 560.0051
PRO 570.0046
LYS 580.0046
ALA 590.0046
ALA 600.0045
GLU 610.0057
GLY 620.0059
LEU 630.0050
ASP 640.0051
THR 650.0054
GLN 660.0057
ARG 670.0046
PHE 680.0041
SER 690.0045
GLY 700.0042
LYS 710.0045
ARG 720.0045
LEU 730.0050
GLY 740.0049
ASP 750.0039
THR 760.0038
PHE 770.0036
VAL 780.0037
LEU 790.0033
THR 800.0037
LEU 810.0034
SER 820.0039
ASP 830.0033
PHE 840.0023
ARG 850.0024
ARG 860.0023
GLU 870.0030
ASN 880.0022
GLU 890.0019
GLY 900.0021
TYR 910.0016
TYR 920.0016
PHE 930.0017
CYS 940.0021
SER 950.0022
ALA 960.0028
LEU 970.0030
SER 980.0031
ASN 990.0033
SER 1000.0031
ILE 1010.0026
MET 1020.0023
TYR 1030.0020
PHE 1040.0018
SER 1050.0022
HIS 1060.0023
PHE 1070.0021
VAL 1080.0023
PRO 1090.0023
VAL 1100.0020
PHE 1110.0022
LEU 1120.0025
PRO 1130.0037
ALA 1140.0046

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.