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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1586
MET 10.0079
SER 20.0076
THR 30.0075
ILE 40.0071
THR 50.0070
LYS 60.0066
ASP 70.0066
GLN 80.0066
ILE 90.0062
LEU 100.0060
GLU 110.0061
GLY 120.0060
VAL 130.0056
ALA 140.0055
ALA 150.0055
LEU 160.0052
SER 170.0048
VAL 180.0045
MET 190.0043
GLU 200.0048
ILE 210.0049
VAL 220.0045
GLU 230.0047
LEU 240.0051
ILE 250.0050
SER 260.0049
ALA 270.0052
MET 280.0055
GLU 290.0053
GLU 300.0054
LYS 310.0058
PHE 320.0059
GLY 330.0057
VAL 340.0056
SER 350.0051
ALA 360.0051
ALA 370.0048
ALA 380.0052
VAL 390.0055
ALA 400.0052
ALA 410.0052
GLY 420.0056
PRO 430.0059
ALA 440.0056
ALA 450.0053
ALA 460.0055
VAL 470.0055
GLU 480.0050
ALA 490.0049
ALA 500.0050
GLU 510.0048
GLU 520.0046
GLN 530.0043
THR 540.0045
GLU 550.0041
PHE 560.0038
ASP 570.0035
VAL 580.0034
VAL 590.0029
LEU 600.0028
ALA 610.0024
SER 620.0022
PHE 630.0024
GLY 640.0023
GLU 650.0022
ASN 660.0026
LYS 670.0027
VAL 680.0030
ALA 690.0032
VAL 700.0031
ILE 710.0033
LYS 720.0036
ALA 730.0036
VAL 740.0035
ARG 750.0038
GLY 760.0041
ALA 770.0040
THR 780.0040
GLY 790.0043
LEU 800.0040
GLY 810.0040
LEU 820.0038
LYS 830.0036
GLU 840.0035
ALA 850.0034
LYS 860.0031
ASP 870.0030
LEU 880.0029
VAL 890.0028
GLU 900.0025
SER 910.0024
ALA 920.0023
PRO 930.0023
ALA 940.0026
VAL 950.0030
LEU 960.0033
LYS 970.0036
GLU 980.0037
GLY 990.0040
VAL 1000.0042
ASN 1010.0044
LYS 1020.0043
ASP 1030.0045
GLU 1040.0044
ALA 1050.0040
GLU 1060.0040
THR 1070.0042
LEU 1080.0039
LYS 1090.0036
LYS 1100.0037
SER 1110.0037
LEU 1120.0033
GLU 1130.0032
GLU 1140.0033
ALA 1150.0032
GLY 1160.0028
ALA 1170.0027
SER 1180.0026
VAL 1190.0029
GLU 1200.0029
ILE 1210.0033
LYS 1220.0032
GLU 1230.0035
ALA 1240.0035
ALA 1250.0032
ALA 1260.0035
LYS 1270.0034
ALA 1280.0033
TYR 1290.0035
LYS 1300.0033
ILE 1310.0036
ILE 1320.0033
SER 1330.0036
LEU 1340.0034
LYS 1350.0035
TYR 1360.0034
THR 1370.0035
ARG 1380.0035
LYS 1390.0035
VAL 1400.0036
CYS 1410.0036
ILE 1420.0038
GLY 1430.0036
PRO 1440.0039
GLY 1450.0039
PRO 1460.0039
GLY 1470.0043
LYS 1480.0046
ALA 1490.0047
TYR 1500.0046
LYS 1510.0048
ILE 1520.0047
ILE 1530.0048
SER 1540.0046
LEU 1550.0047
LYS 1560.0046
TYR 1570.0046
THR 1580.0045
ARG 1590.0045
LYS 1600.0045
VAL 1610.0044
CYS 1620.0045
GLY 1630.0043
PRO 1640.0046
GLY 1650.0049
PRO 1660.0050
GLY 1670.0051
GLY 1680.0048
LYS 1690.0050
ALA 1700.0048
TYR 1710.0050
LYS 1720.0049
ILE 1730.0050
ILE 1740.0050
SER 1750.0051
LEU 1760.0051
LYS 1770.0052
TYR 1780.0052
THR 1790.0052
ARG 1800.0053
LYS 1810.0052
VAL 1820.0052
GLY 1830.0050
PRO 1840.0047
GLY 1850.0043
PRO 1860.0040
GLY 1870.0041
ILE 1880.0039
ILE 1890.0041
SER 1900.0040
LEU 1910.0040
LYS 1920.0040
TYR 1930.0039
THR 1940.0039
ARG 1950.0038
LYS 1960.0039
VAL 1970.0036
CYS 1980.0036
ILE 1990.0033
GLN 2000.0032
LEU 2010.0029
GLY 2020.0028
GLY 2030.0025
PRO 2040.0021
GLY 2050.0019
PRO 2060.0016
GLY 2070.0018
ASN 2080.0021
ILE 2090.0020
LYS 2100.0018
THR 2110.0021
ALA 2120.0024
PHE 2130.0021
HIS 2140.0020
CYS 2150.0024
TYR 2160.0024
ALA 2170.0021
ALA 2180.0022
TYR 2190.0025
MET 2200.0024
THR 2210.0021
SER 2220.0025
ILE 2230.0027
LYS 2240.0027
ALA 2250.0029
CYS 2260.0033
ASP 2270.0043
LEU 2280.0041
LYS 2290.0052
LYS 2300.0053
PRO 2310.0042
LEU 2320.0067
MET 2330.0069
GLU 2340.0095
SER 2350.0109
GLY 2360.0117
TRP 2370.0082
SER 2380.0070
ASP 2390.0036
THR 2400.0045
ALA 2410.0040
HIS 2420.0063
GLY 2430.0086
LYS 2440.0124
LYS 2450.0154
SER 2460.0178
LEU 2470.0181
PRO 2480.0217
SER 2490.0236
SER 2500.0238
SER 2510.0225
SER 2520.0197
TYR 2530.0158
SER 2540.0135
TYR 2550.0099
ARG 2560.0078
ARG 2570.0064
LYS 2580.0064
LEU 2590.0084
THR 2600.0103
ASN 2610.0134
PRO 2620.0154
ALA 2630.0182
ASN 2640.0162
LYS 2650.0164
GLU 2660.0134
GLU 2670.0144
SER 2680.0130
ILE 2690.0140
LYS 2700.0157
LYS 2710.0152
GLN 2720.0176
LYS 2730.0192
TYR 2740.0205
SER 2750.0236
TYR 2760.0254
PRO 2770.0297
TRP 2780.0309
GLN 2790.0309
THR 2800.0346
SER 2810.0379
LYS 2820.0409
CYS 2830.0426
PHE 2840.0491
ASP 2880.1586
TYR 2890.1382
GLN 2900.0963
TYR 2910.0895
CYS 2970.0056
ASN 2980.0056
PRO 2990.0055
GLY 3000.0056
LYS 3010.0054
LYS 3020.0052
ASN 3030.0049
THR 3040.0048
ILE 3050.0044
SER 3060.0042
GLY 3070.0040
TYR 3080.0037
LYS 3090.0038
ARG 3100.0039
MET 3110.0036
MET 3120.0035
ALA 3130.0037
THR 3140.0035
LYS 3150.0032
ASP 3160.0031
SER 3170.0032
PHE 3180.0030
GLN 3190.0027
SER 3200.0024
PHE 3210.0022
ASN 3220.0018
LEU 3230.0017
THR 3240.0014
GLU 3250.0015
PRO 3260.0018
HIS 3270.0021
ILE 3280.0024
THR 3290.0027
THR 3300.0030
ASN 3310.0031
LYS 3320.0028
LEU 3330.0025
GLU 3340.0022
TRP 3350.0019
ILE 3360.0016
ASP 3370.0016
PRO 3380.0013
ASP 3390.0016
GLY 3400.0016
ASN 3410.0020
THR 3420.0021
ARG 3430.0021
GLY 3440.0023
GLY 3450.0025
GLY 3460.0025
GLY 10.0021
SER 20.0018
HIS 30.0017
SER 40.0014
MET 50.0015
ARG 60.0012
TYR 70.0013
PHE 80.0011
PHE 90.0014
THR 100.0014
SER 110.0018
VAL 120.0018
SER 130.0022
ARG 140.0024
PRO 150.0028
GLY 160.0030
ARG 170.0028
GLY 180.0027
GLU 190.0026
PRO 200.0023
ARG 210.0019
PHE 220.0018
ILE 230.0015
ALA 240.0015
VAL 250.0013
GLY 260.0014
TYR 270.0013
VAL 280.0015
ASP 290.0013
ASP 300.0011
THR 310.0013
GLN 320.0013
PHE 330.0017
VAL 340.0017
ARG 350.0016
PHE 360.0018
ASP 370.0017
SER 380.0021
ASP 390.0020
ALA 400.0019
ALA 410.0022
SER 420.0024
GLN 430.0025
ARG 440.0024
MET 450.0022
GLU 460.0020
PRO 470.0020
ARG 480.0016
ALA 490.0018
PRO 500.0022
TRP 510.0024
ILE 520.0024
GLU 530.0025
GLN 540.0029
GLU 550.0029
GLY 560.0032
PRO 570.0032
GLU 580.0033
TYR 590.0030
TRP 600.0028
ASP 610.0031
GLY 620.0030
GLU 630.0026
THR 640.0026
ARG 650.0029
LYS 660.0026
VAL 670.0023
LYS 680.0026
ALA 690.0027
HIS 700.0023
SER 710.0023
GLN 720.0026
THR 730.0025
HIS 740.0022
ARG 750.0025
VAL 760.0028
ASP 770.0025
LEU 780.0025
GLY 790.0029
THR 800.0028
LEU 810.0025
ARG 820.0028
GLY 830.0031
TYR 840.0028
TYR 850.0028
ASN 860.0032
GLN 870.0030
SER 880.0033
GLU 890.0032
ALA 900.0030
GLY 910.0026
SER 920.0023
HIS 930.0021
THR 940.0018
VAL 950.0017
GLN 960.0014
ARG 970.0013
MET 980.0011
TYR 990.0013
GLY 1000.0014
CYS 1010.0014
ASP 1020.0014
VAL 1030.0018
GLY 1040.0019
SER 1050.0022
ASP 1060.0024
TRP 1070.0023
ARG 1080.0022
PHE 1090.0019
LEU 1100.0015
ARG 1110.0013
GLY 1120.0013
TYR 1130.0011
HIS 1140.0013
GLN 1150.0011
TYR 1160.0014
ALA 1170.0014
TYR 1180.0017
ASP 1190.0017
GLY 1200.0013
LYS 1210.0014
ASP 1220.0013
TYR 1230.0016
ILE 1240.0015
ALA 1250.0012
LEU 1260.0013
LYS 1270.0010
GLU 1280.0009
ASP 1290.0012
LEU 1300.0015
ARG 1310.0017
SER 1320.0015
TRP 1330.0015
THR 1340.0013
ALA 1350.0017
ALA 1360.0016
ASP 1370.0020
MET 1380.0024
ALA 1390.0024
ALA 1400.0021
GLN 1410.0022
THR 1420.0026
THR 1430.0023
LYS 1440.0021
HIS 1450.0025
LYS 1460.0027
TRP 1470.0024
GLU 1480.0024
ALA 1490.0028
ALA 1500.0028
HIS 1510.0026
VAL 1520.0024
ALA 1530.0020
GLU 1540.0023
GLN 1550.0024
LEU 1560.0021
ARG 1570.0020
ALA 1580.0023
TYR 1590.0022
LEU 1600.0019
GLU 1610.0020
GLY 1620.0024
THR 1630.0024
CYS 1640.0021
VAL 1650.0021
GLU 1660.0025
TRP 1670.0024
LEU 1680.0021
ARG 1690.0025
ARG 1700.0027
TYR 1710.0024
LEU 1720.0024
GLU 1730.0028
ASN 1740.0028
GLY 1750.0025
LYS 1760.0026
GLU 1770.0026
THR 1780.0022
LEU 1790.0021
GLN 1800.0023
ARG 1810.0023
THR 1820.0022
ASP 1830.0022
ALA 1840.0023
PRO 1850.0022
LYS 1860.0024
THR 1870.0025
HIS 1880.0027
MET 1890.0028
THR 1900.0028
HIS 1910.0030
HIS 1920.0030
ALA 1930.0033
VAL 1940.0032
SER 1950.0036
ASP 1960.0040
HIS 1970.0040
GLU 1980.0036
ALA 1990.0033
THR 2000.0029
LEU 2010.0029
ARG 2020.0025
CYS 2030.0024
TRP 2040.0022
ALA 2050.0020
LEU 2060.0019
SER 2070.0019
PHE 2080.0018
TYR 2090.0017
PRO 2100.0015
ALA 2110.0012
GLU 2120.0012
ILE 2130.0015
THR 2140.0017
LEU 2150.0019
THR 2160.0022
TRP 2170.0025
GLN 2180.0028
ARG 2190.0032
ASP 2200.0035
GLY 2210.0032
GLU 2220.0029
ASP 2230.0026
GLN 2240.0026
THR 2250.0022
GLN 2260.0023
ASP 2270.0026
THR 2280.0023
GLU 2290.0020
LEU 2300.0017
VAL 2310.0014
GLU 2320.0010
THR 2330.0010
ARG 2340.0009
PRO 2350.0009
ALA 2360.0012
GLY 2370.0011
ASP 2380.0015
GLY 2390.0015
THR 2400.0015
PHE 2410.0013
GLN 2420.0014
LYS 2430.0015
TRP 2440.0018
ALA 2450.0020
ALA 2460.0023
VAL 2470.0027
VAL 2480.0030
VAL 2490.0033
PRO 2500.0037
SER 2510.0039
GLY 2520.0042
GLN 2530.0039
GLU 2540.0036
GLN 2550.0038
ARG 2560.0036
TYR 2570.0033
THR 2580.0031
CYS 2590.0027
HIS 2600.0025
VAL 2610.0023
GLN 2620.0021
HIS 2630.0020
GLU 2640.0020
GLY 2650.0023
LEU 2660.0025
PRO 2670.0028
LYS 2680.0028
PRO 2690.0026
LEU 2700.0027
THR 2710.0030
LEU 2720.0031
ARG 2730.0034
TRP 2740.0034
GLU 2750.0038
PRO 2760.0039
GLN 2780.0018
ARG 2790.0014
THR 2800.0014
PRO 2810.0011
LYS 2820.0011
ILE 2830.0010
GLN 2840.0011
VAL 2850.0011
TYR 2860.0012
SER 2870.0013
ARG 2880.0014
HIS 2890.0018
PRO 2900.0020
ALA 2910.0020
GLU 2920.0022
ASN 2930.0021
GLY 2940.0020
LYS 2950.0020
SER 2960.0016
ASN 2970.0015
PHE 2980.0011
LEU 2990.0009
ASN 3000.0007
CYS 3010.0006
TYR 3020.0005
VAL 3030.0006
SER 3040.0006
GLY 3050.0008
PHE 3060.0010
HIS 3070.0012
PRO 3080.0014
SER 3090.0011
ASP 3100.0013
ILE 3110.0011
GLU 3120.0011
VAL 3130.0007
ASP 3140.0007
LEU 3150.0006
LEU 3160.0009
LYS 3170.0010
ASN 3180.0013
GLY 3190.0013
GLU 3200.0010
ARG 3210.0007
ILE 3220.0003
GLU 3230.0002
LYS 3240.0004
VAL 3250.0003
GLU 3260.0005
HIS 3270.0004
SER 3280.0006
ASP 3290.0008
LEU 3300.0008
SER 3310.0006
PHE 3320.0005
SER 3330.0002
LYS 3340.0002
ASP 3350.0006
TRP 3360.0007
SER 3370.0007
PHE 3380.0006
TYR 3390.0003
LEU 3400.0002
LEU 3410.0002
TYR 3420.0001
TYR 3430.0004
THR 3440.0005
GLU 3450.0009
PHE 3460.0011
THR 3470.0014
PRO 3480.0016
THR 3490.0018
GLU 3500.0021
LYS 3510.0020
ASP 3520.0016
GLU 3530.0016
TYR 3540.0012
ALA 3550.0012
CYS 3560.0010
ARG 3570.0011
VAL 3580.0011
ASN 3590.0014
HIS 3600.0015
VAL 3610.0018
THR 3620.0019
LEU 3630.0019
SER 3640.0023
GLN 3650.0021
PRO 3660.0017
LYS 3670.0016
ILE 3680.0015
VAL 3690.0015
LYS 3700.0016
TRP 3710.0015
ASP 3720.0019
ARG 3730.0020
ASP 3740.0023
MET 3750.0022
SER 10.0013
GLN 20.0011
PHE 30.0009
ARG 40.0007
VAL 50.0008
SER 60.0007
PRO 70.0008
LEU 80.0012
ASP 90.0014
ARG 100.0013
THR 110.0013
TRP 120.0011
ASN 130.0011
LEU 140.0011
GLY 150.0007
GLU 160.0005
THR 170.0004
VAL 180.0006
GLU 190.0004
LEU 200.0006
LYS 210.0004
CYS 220.0006
GLN 230.0004
VAL 240.0007
LEU 250.0006
LEU 260.0008
SER 270.0007
ASN 280.0011
PRO 290.0013
THR 300.0017
SER 310.0017
GLY 320.0015
CYS 330.0014
SER 340.0016
TRP 350.0014
LEU 360.0017
PHE 370.0018
GLN 380.0021
PRO 390.0022
ARG 400.0024
GLY 410.0028
ALA 420.0031
ALA 430.0031
ALA 440.0028
SER 450.0027
PRO 460.0024
THR 470.0023
PHE 480.0021
LEU 490.0018
LEU 500.0017
TYR 510.0017
LEU 520.0015
SER 530.0016
GLN 540.0017
ASN 550.0020
LYS 560.0021
PRO 570.0018
LYS 580.0021
ALA 590.0020
ALA 600.0023
GLU 610.0026
GLY 620.0025
LEU 630.0021
ASP 640.0018
THR 650.0017
GLN 660.0015
ARG 670.0012
PHE 680.0013
SER 690.0012
GLY 700.0011
LYS 710.0011
ARG 720.0010
LEU 730.0008
GLY 740.0009
ASP 750.0006
THR 760.0004
PHE 770.0007
VAL 780.0006
LEU 790.0008
THR 800.0007
LEU 810.0009
SER 820.0007
ASP 830.0008
PHE 840.0010
ARG 850.0014
ARG 860.0017
GLU 870.0019
ASN 880.0016
GLU 890.0017
GLY 900.0018
TYR 910.0017
TYR 920.0014
PHE 930.0014
CYS 940.0013
SER 950.0015
ALA 960.0015
LEU 970.0017
SER 980.0017
ASN 990.0019
SER 1000.0022
ILE 1010.0021
MET 1020.0020
TYR 1030.0017
PHE 1040.0016
SER 1050.0014
HIS 1060.0015
PHE 1070.0016
VAL 1080.0013
PRO 1090.0016
VAL 1100.0014
PHE 1110.0016
LEU 1120.0016
PRO 1130.0018
ALA 1140.0022
SER 10.0033
GLN 20.0035
PHE 30.0036
ARG 40.0040
VAL 50.0040
SER 60.0042
PRO 70.0044
LEU 80.0043
ASP 90.0046
ARG 100.0046
THR 110.0046
TRP 120.0046
ASN 130.0047
LEU 140.0046
GLY 150.0046
GLU 160.0046
THR 170.0044
VAL 180.0042
GLU 190.0042
LEU 200.0040
LYS 210.0040
CYS 220.0038
GLN 230.0040
VAL 240.0037
LEU 250.0039
LEU 260.0036
SER 270.0037
ASN 280.0036
PRO 290.0036
THR 300.0036
SER 310.0032
GLY 320.0032
CYS 330.0031
SER 340.0029
TRP 350.0030
LEU 360.0028
PHE 370.0029
GLN 380.0028
PRO 390.0030
ARG 400.0032
GLY 410.0030
ALA 420.0027
ALA 430.0023
ALA 440.0024
SER 450.0022
PRO 460.0023
THR 470.0024
PHE 480.0024
LEU 490.0027
LEU 500.0029
TYR 510.0029
LEU 520.0032
SER 530.0033
GLN 540.0035
ASN 550.0033
LYS 560.0032
PRO 570.0031
LYS 580.0027
ALA 590.0027
ALA 600.0024
GLU 610.0021
GLY 620.0024
LEU 630.0027
ASP 640.0031
THR 650.0032
GLN 660.0035
ARG 670.0037
PHE 680.0035
SER 690.0036
GLY 700.0036
LYS 710.0038
ARG 720.0039
LEU 730.0043
GLY 740.0044
ASP 750.0041
THR 760.0041
PHE 770.0038
VAL 780.0039
LEU 790.0037
THR 800.0039
LEU 810.0038
SER 820.0041
ASP 830.0042
PHE 840.0041
ARG 850.0040
ARG 860.0039
GLU 870.0035
ASN 880.0035
GLU 890.0036
GLY 900.0034
TYR 910.0033
TYR 920.0033
PHE 930.0032
CYS 940.0031
SER 950.0028
ALA 960.0029
LEU 970.0027
SER 980.0029
ASN 990.0028
SER 1000.0024
ILE 1010.0025
MET 1020.0024
TYR 1030.0027
PHE 1040.0028
SER 1050.0032
HIS 1060.0033
PHE 1070.0033
VAL 1080.0037
PRO 1090.0038
VAL 1100.0039
PHE 1110.0041
LEU 1120.0044
PRO 1130.0047
ALA 1140.0047

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.