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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0427
MET 10.0036
SER 20.0032
THR 30.0014
ILE 40.0017
THR 50.0019
LYS 60.0034
ASP 70.0023
GLN 80.0014
ILE 90.0029
LEU 100.0027
GLU 110.0014
GLY 120.0016
VAL 130.0021
ALA 140.0021
ALA 150.0023
LEU 160.0026
SER 170.0039
VAL 180.0046
MET 190.0044
GLU 200.0030
ILE 210.0029
VAL 220.0035
GLU 230.0027
LEU 240.0022
ILE 250.0030
SER 260.0029
ALA 270.0056
MET 280.0041
GLU 290.0029
GLU 300.0068
LYS 310.0085
PHE 320.0041
GLY 330.0064
VAL 340.0055
SER 350.0085
ALA 360.0134
ALA 370.0138
ALA 380.0096
VAL 390.0068
ALA 400.0083
ALA 410.0111
GLY 420.0168
PRO 430.0136
ALA 440.0163
ALA 450.0156
ALA 460.0165
VAL 470.0157
GLU 480.0301
ALA 490.0382
ALA 500.0398
GLU 510.0351
GLU 520.0285
GLN 530.0235
THR 540.0193
GLU 550.0158
PHE 560.0137
ASP 570.0145
VAL 580.0118
VAL 590.0176
LEU 600.0184
ALA 610.0222
SER 620.0234
PHE 630.0224
GLY 640.0211
GLU 650.0234
ASN 660.0210
LYS 670.0266
VAL 680.0291
ALA 690.0221
VAL 700.0192
ILE 710.0254
LYS 720.0259
ALA 730.0188
VAL 740.0202
ARG 750.0275
GLY 760.0261
ALA 770.0192
THR 780.0228
GLY 790.0303
LEU 800.0341
GLY 810.0402
LEU 820.0389
LYS 830.0427
GLU 840.0381
ALA 850.0299
LYS 860.0287
ASP 870.0322
LEU 880.0273
VAL 890.0235
GLU 900.0285
SER 910.0257
ALA 920.0239
PRO 930.0237
ALA 940.0233
VAL 950.0219
LEU 960.0183
LYS 970.0140
GLU 980.0149
GLY 990.0104
VAL 1000.0039
ASN 1010.0088
LYS 1020.0151
ASP 1030.0166
GLU 1040.0094
ALA 1050.0054
GLU 1060.0114
THR 1070.0118
LEU 1080.0059
LYS 1090.0035
LYS 1100.0080
SER 1110.0103
LEU 1120.0078
GLU 1130.0034
GLU 1140.0077
ALA 1150.0122
GLY 1160.0104
ALA 1170.0129
SER 1180.0146
VAL 1190.0133
GLU 1200.0173
ILE 1210.0166
LYS 1220.0196
GLU 1230.0202
ALA 1240.0190
ALA 1250.0226
ALA 1260.0145
LYS 1270.0105
ALA 1280.0085
TYR 1290.0033
LYS 1300.0015
ILE 1310.0072
ILE 1320.0100
SER 1330.0137
LEU 1340.0165
LYS 1350.0203
TYR 1360.0210
THR 1370.0170
ARG 1380.0193
LYS 1390.0162
VAL 1400.0173
CYS 1410.0142
ILE 1420.0076
GLY 1430.0086
PRO 1440.0088
GLY 1450.0157
PRO 1460.0316
GLY 1470.0312
LYS 1480.0224
ALA 1490.0127
TYR 1500.0079
LYS 1510.0059
ILE 1520.0072
ILE 1530.0102
SER 1540.0127
LEU 1550.0168
LYS 1560.0188
TYR 1570.0206
THR 1580.0187
ARG 1590.0203
LYS 1600.0182
VAL 1610.0149
CYS 1620.0129
GLY 1630.0147
PRO 1640.0173
GLY 1650.0192
PRO 1660.0268
GLY 1670.0241
GLY 1680.0282
LYS 1690.0206
ALA 1700.0186
TYR 1710.0174
LYS 1720.0205
ILE 1730.0198
ILE 1740.0235
SER 1750.0231
LEU 1760.0222
LYS 1770.0190
TYR 1780.0158
THR 1790.0128
ARG 1800.0102
LYS 1810.0094
VAL 1820.0073
GLY 1830.0051
PRO 1840.0076
GLY 1850.0089
PRO 1860.0082
GLY 1870.0055
ILE 1880.0100
ILE 1890.0114
SER 1900.0152
LEU 1910.0181
LYS 1920.0172
TYR 1930.0193
THR 1940.0187
ARG 1950.0210
LYS 1960.0158
VAL 1970.0124
CYS 1980.0077
ILE 1990.0069
GLN 2000.0047
LEU 2010.0073
GLY 2020.0073
GLY 2030.0065
PRO 2040.0067
GLY 2050.0077
PRO 2060.0063
GLY 2070.0069
ASN 2080.0080
ILE 2090.0083
LYS 2100.0079
THR 2110.0073
ALA 2120.0083
PHE 2130.0072
HIS 2140.0055
CYS 2150.0063
TYR 2160.0044
ALA 2170.0064
ALA 2180.0070
TYR 2190.0053
MET 2200.0053
THR 2210.0082
SER 2220.0094
ILE 2230.0109
LYS 2240.0128
ALA 2250.0145
CYS 2260.0170
ASP 2270.0154
LEU 2280.0106
LYS 2290.0117
LYS 2300.0155
PRO 2310.0211
LEU 2320.0085
MET 2330.0061
GLU 2340.0113
SER 2350.0159
GLY 2360.0078
TRP 2370.0031
SER 2380.0051
ASP 2390.0067
THR 2400.0110
ALA 2410.0246
HIS 2420.0161
GLY 2430.0099
LYS 2440.0056
LYS 2450.0137
SER 2460.0078
LEU 2470.0082
PRO 2480.0083
SER 2490.0079
SER 2500.0100
SER 2510.0069
SER 2520.0043
TYR 2530.0030
SER 2540.0010
TYR 2550.0025
ARG 2560.0045
ARG 2570.0040
LYS 2580.0024
LEU 2590.0023
THR 2600.0018
ASN 2610.0048
PRO 2620.0072
ALA 2630.0082
ASN 2640.0053
LYS 2650.0032
GLU 2660.0011
GLU 2670.0021
SER 2680.0027
ILE 2690.0036
LYS 2700.0049
LYS 2710.0036
GLN 2720.0035
LYS 2730.0028
TYR 2740.0036
SER 2750.0051
TYR 2760.0054
PRO 2770.0094
TRP 2780.0065
GLN 2790.0099
THR 2800.0107
SER 2810.0069
LYS 2820.0089
CYS 2830.0071
PHE 2840.0086
ASP 2880.0090
TYR 2890.0045
GLN 2900.0028
TYR 2910.0072
CYS 2970.0054
ASN 2980.0171
PRO 2990.0137
GLY 3000.0158
LYS 3010.0146
LYS 3020.0148
ASN 3030.0146
THR 3040.0189
ILE 3050.0134
SER 3060.0158
GLY 3070.0132
TYR 3080.0099
LYS 3090.0040
ARG 3100.0051
MET 3110.0116
MET 3120.0093
ALA 3130.0114
THR 3140.0152
LYS 3150.0145
ASP 3160.0185
SER 3170.0199
PHE 3180.0162
GLN 3190.0120
SER 3200.0094
PHE 3210.0112
ASN 3220.0120
LEU 3230.0167
THR 3240.0192
GLU 3250.0227
PRO 3260.0233
HIS 3270.0272
ILE 3280.0275
THR 3290.0289
THR 3300.0302
ASN 3310.0328
LYS 3320.0370
LEU 3330.0316
GLU 3340.0315
TRP 3350.0273
ILE 3360.0272
ASP 3370.0225
PRO 3380.0207
ASP 3390.0146
GLY 3400.0183
ASN 3410.0142
THR 3420.0169
ARG 3430.0167
GLY 3440.0171
GLY 3450.0167
GLY 3460.0389
GLY 10.0093
SER 20.0093
HIS 30.0086
SER 40.0085
MET 50.0081
ARG 60.0072
TYR 70.0071
PHE 80.0071
PHE 90.0071
THR 100.0070
SER 110.0075
VAL 120.0077
SER 130.0069
ARG 140.0072
PRO 150.0071
GLY 160.0095
ARG 170.0099
GLY 180.0085
GLU 190.0065
PRO 200.0064
ARG 210.0074
PHE 220.0074
ILE 230.0072
ALA 240.0072
VAL 250.0070
GLY 260.0074
TYR 270.0071
VAL 280.0069
ASP 290.0070
ASP 300.0070
THR 310.0074
GLN 320.0072
PHE 330.0072
VAL 340.0074
ARG 350.0075
PHE 360.0078
ASP 370.0079
SER 380.0082
ASP 390.0082
ALA 400.0083
ALA 410.0098
SER 420.0099
GLN 430.0098
ARG 440.0095
MET 450.0089
GLU 460.0085
PRO 470.0082
ARG 480.0078
ALA 490.0079
PRO 500.0083
TRP 510.0084
ILE 520.0085
GLU 530.0093
GLN 540.0098
GLU 550.0098
GLY 560.0104
PRO 570.0109
GLU 580.0112
TYR 590.0102
TRP 600.0101
ASP 610.0104
GLY 620.0102
GLU 630.0095
THR 640.0098
ARG 650.0104
LYS 660.0089
VAL 670.0084
LYS 680.0090
ALA 690.0093
HIS 700.0087
SER 710.0074
GLN 720.0074
THR 730.0075
HIS 740.0074
ARG 750.0074
VAL 760.0053
ASP 770.0057
LEU 780.0058
GLY 790.0054
THR 800.0054
LEU 810.0042
ARG 820.0037
GLY 830.0028
TYR 840.0042
TYR 850.0051
ASN 860.0041
GLN 870.0067
SER 880.0090
GLU 890.0096
ALA 900.0123
GLY 910.0076
SER 920.0074
HIS 930.0071
THR 940.0076
VAL 950.0075
GLN 960.0072
ARG 970.0074
MET 980.0073
TYR 990.0075
GLY 1000.0073
CYS 1010.0089
ASP 1020.0092
VAL 1030.0094
GLY 1040.0100
SER 1050.0099
ASP 1060.0100
TRP 1070.0092
ARG 1080.0096
PHE 1090.0098
LEU 1100.0105
ARG 1110.0094
GLY 1120.0088
TYR 1130.0085
HIS 1140.0080
GLN 1150.0080
TYR 1160.0075
ALA 1170.0073
TYR 1180.0072
ASP 1190.0070
GLY 1200.0072
LYS 1210.0080
ASP 1220.0083
TYR 1230.0083
ILE 1240.0086
ALA 1250.0087
LEU 1260.0098
LYS 1270.0107
GLU 1280.0107
ASP 1290.0112
LEU 1300.0104
ARG 1310.0121
SER 1320.0120
TRP 1330.0110
THR 1340.0111
ALA 1350.0106
ALA 1360.0103
ASP 1370.0094
MET 1380.0088
ALA 1390.0079
ALA 1400.0085
GLN 1410.0109
THR 1420.0102
THR 1430.0093
LYS 1440.0107
HIS 1450.0119
LYS 1460.0113
TRP 1470.0110
GLU 1480.0130
ALA 1490.0138
ALA 1500.0125
HIS 1510.0128
VAL 1520.0109
ALA 1530.0111
GLU 1540.0118
GLN 1550.0105
LEU 1560.0096
ARG 1570.0102
ALA 1580.0100
TYR 1590.0090
LEU 1600.0091
GLU 1610.0099
GLY 1620.0095
THR 1630.0091
CYS 1640.0088
VAL 1650.0089
GLU 1660.0089
TRP 1670.0087
LEU 1680.0084
ARG 1690.0084
ARG 1700.0084
TYR 1710.0081
LEU 1720.0080
GLU 1730.0081
ASN 1740.0083
GLY 1750.0083
LYS 1760.0081
GLU 1770.0082
THR 1780.0077
LEU 1790.0073
GLN 1800.0072
ARG 1810.0049
THR 1820.0050
ASP 1830.0051
ALA 1840.0054
PRO 1850.0056
LYS 1860.0064
THR 1870.0063
HIS 1880.0062
MET 1890.0057
THR 1900.0052
HIS 1910.0059
HIS 1920.0052
ALA 1930.0060
VAL 1940.0050
SER 1950.0067
ASP 1960.0086
HIS 1970.0073
GLU 1980.0053
ALA 1990.0050
THR 2000.0035
LEU 2010.0043
ARG 2020.0040
CYS 2030.0047
TRP 2040.0048
ALA 2050.0053
LEU 2060.0047
SER 2070.0046
PHE 2080.0045
TYR 2090.0046
PRO 2100.0046
ALA 2110.0044
GLU 2120.0048
ILE 2130.0050
THR 2140.0054
LEU 2150.0052
THR 2160.0055
TRP 2170.0048
GLN 2180.0055
ARG 2190.0052
ASP 2200.0066
GLY 2210.0065
GLU 2220.0054
ASP 2230.0050
GLN 2240.0034
THR 2250.0046
GLN 2260.0040
ASP 2270.0029
THR 2280.0029
GLU 2290.0025
LEU 2300.0029
VAL 2310.0027
GLU 2320.0030
THR 2330.0036
ARG 2340.0035
PRO 2350.0040
ALA 2360.0047
GLY 2370.0050
ASP 2380.0048
GLY 2390.0045
THR 2400.0043
PHE 2410.0045
GLN 2420.0042
LYS 2430.0039
TRP 2440.0036
ALA 2450.0033
ALA 2460.0024
VAL 2470.0023
VAL 2480.0022
VAL 2490.0037
PRO 2500.0047
SER 2510.0066
GLY 2520.0075
GLN 2530.0064
GLU 2540.0067
GLN 2550.0082
ARG 2560.0068
TYR 2570.0060
THR 2580.0069
CYS 2590.0065
HIS 2600.0075
VAL 2610.0066
GLN 2620.0068
HIS 2630.0065
GLU 2640.0067
GLY 2650.0069
LEU 2660.0090
PRO 2670.0111
LYS 2680.0114
PRO 2690.0100
LEU 2700.0093
THR 2710.0096
LEU 2720.0089
ARG 2730.0089
TRP 2740.0081
GLU 2750.0096
PRO 2760.0119
GLN 2780.0054
ARG 2790.0040
THR 2800.0044
PRO 2810.0038
LYS 2820.0040
ILE 2830.0031
GLN 2840.0032
VAL 2850.0033
TYR 2860.0038
SER 2870.0045
ARG 2880.0052
HIS 2890.0053
PRO 2900.0051
ALA 2910.0052
GLU 2920.0056
ASN 2930.0052
GLY 2940.0058
LYS 2950.0061
SER 2960.0062
ASN 2970.0057
PHE 2980.0049
LEU 2990.0043
ASN 3000.0041
CYS 3010.0037
TYR 3020.0036
VAL 3030.0030
SER 3040.0024
GLY 3050.0027
PHE 3060.0034
HIS 3070.0038
PRO 3080.0026
SER 3090.0009
ASP 3100.0022
ILE 3110.0038
GLU 3120.0055
VAL 3130.0055
ASP 3140.0056
LEU 3150.0051
LEU 3160.0049
LYS 3170.0049
ASN 3180.0045
GLY 3190.0049
GLU 3200.0060
ARG 3210.0066
ILE 3220.0068
GLU 3230.0088
LYS 3240.0079
VAL 3250.0062
GLU 3260.0050
HIS 3270.0036
SER 3280.0028
ASP 3290.0041
LEU 3300.0048
SER 3310.0046
PHE 3320.0047
SER 3330.0025
LYS 3340.0030
ASP 3350.0041
TRP 3360.0050
SER 3370.0047
PHE 3380.0037
TYR 3390.0030
LEU 3400.0028
LEU 3410.0027
TYR 3420.0035
TYR 3430.0047
THR 3440.0052
GLU 3450.0055
PHE 3460.0053
THR 3470.0053
PRO 3480.0050
THR 3490.0048
GLU 3500.0044
LYS 3510.0042
ASP 3520.0044
GLU 3530.0036
TYR 3540.0041
ALA 3550.0040
CYS 3560.0046
ARG 3570.0050
VAL 3580.0063
ASN 3590.0068
HIS 3600.0061
VAL 3610.0060
THR 3620.0049
LEU 3630.0103
SER 3640.0105
GLN 3650.0104
PRO 3660.0098
LYS 3670.0077
ILE 3680.0039
VAL 3690.0033
LYS 3700.0030
TRP 3710.0034
ASP 3720.0037
ARG 3730.0039
ASP 3740.0040
MET 3750.0037
SER 10.0043
GLN 20.0032
PHE 30.0019
ARG 40.0019
VAL 50.0016
SER 60.0034
PRO 70.0049
LEU 80.0057
ASP 90.0081
ARG 100.0081
THR 110.0082
TRP 120.0088
ASN 130.0106
LEU 140.0108
GLY 150.0128
GLU 160.0107
THR 170.0094
VAL 180.0067
GLU 190.0056
LEU 200.0029
LYS 210.0017
CYS 220.0009
GLN 230.0008
VAL 240.0015
LEU 250.0019
LEU 260.0034
SER 270.0031
ASN 280.0036
PRO 290.0040
THR 300.0046
SER 310.0047
GLY 320.0041
CYS 330.0035
SER 340.0041
TRP 350.0035
LEU 360.0045
PHE 370.0040
GLN 380.0045
PRO 390.0040
ARG 400.0042
GLY 410.0067
ALA 420.0070
ALA 430.0070
ALA 440.0067
SER 450.0066
PRO 460.0054
THR 470.0054
PHE 480.0055
LEU 490.0050
LEU 500.0049
TYR 510.0046
LEU 520.0036
SER 530.0030
GLN 540.0026
ASN 550.0036
LYS 560.0044
PRO 570.0045
LYS 580.0054
ALA 590.0059
ALA 600.0065
GLU 610.0084
GLY 620.0085
LEU 630.0076
ASP 640.0082
THR 650.0083
GLN 660.0105
ARG 670.0088
PHE 680.0070
SER 690.0063
GLY 700.0045
LYS 710.0034
ARG 720.0027
LEU 730.0022
GLY 740.0016
ASP 750.0013
THR 760.0010
PHE 770.0022
VAL 780.0031
LEU 790.0037
THR 800.0053
LEU 810.0075
SER 820.0097
ASP 830.0101
PHE 840.0077
ARG 850.0071
ARG 860.0040
GLU 870.0036
ASN 880.0041
GLU 890.0014
GLY 900.0016
TYR 910.0023
TYR 920.0021
PHE 930.0026
CYS 940.0031
SER 950.0045
ALA 960.0050
LEU 970.0048
SER 980.0047
ASN 990.0045
SER 1000.0045
ILE 1010.0059
MET 1020.0054
TYR 1030.0048
PHE 1040.0043
SER 1050.0038
HIS 1060.0032
PHE 1070.0025
VAL 1080.0016
PRO 1090.0022
VAL 1100.0021
PHE 1110.0043
LEU 1120.0070
PRO 1130.0104
ALA 1140.0112
SER 10.0040
GLN 20.0033
PHE 30.0024
ARG 40.0020
VAL 50.0023
SER 60.0027
PRO 70.0041
LEU 80.0024
ASP 90.0037
ARG 100.0060
THR 110.0077
TRP 120.0105
ASN 130.0135
LEU 140.0161
GLY 150.0171
GLU 160.0143
THR 170.0126
VAL 180.0097
GLU 190.0078
LEU 200.0049
LYS 210.0037
CYS 220.0023
GLN 230.0018
VAL 240.0017
LEU 250.0028
LEU 260.0021
SER 270.0025
ASN 280.0023
PRO 290.0015
THR 300.0011
SER 310.0023
GLY 320.0024
CYS 330.0028
SER 340.0040
TRP 350.0044
LEU 360.0049
PHE 370.0058
GLN 380.0068
PRO 390.0076
ARG 400.0080
GLY 410.0059
ALA 420.0051
ALA 430.0044
ALA 440.0049
SER 450.0047
PRO 460.0060
THR 470.0061
PHE 480.0054
LEU 490.0051
LEU 500.0043
TYR 510.0038
LEU 520.0026
SER 530.0010
GLN 540.0010
ASN 550.0015
LYS 560.0025
PRO 570.0033
LYS 580.0040
ALA 590.0057
ALA 600.0071
GLU 610.0098
GLY 620.0117
LEU 630.0107
ASP 640.0120
THR 650.0100
GLN 660.0130
ARG 670.0126
PHE 680.0100
SER 690.0081
GLY 700.0058
LYS 710.0051
ARG 720.0038
LEU 730.0046
GLY 740.0040
ASP 750.0026
THR 760.0029
PHE 770.0031
VAL 780.0048
LEU 790.0060
THR 800.0079
LEU 810.0107
SER 820.0136
ASP 830.0157
PHE 840.0138
ARG 850.0157
ARG 860.0156
GLU 870.0155
ASN 880.0118
GLU 890.0102
GLY 900.0083
TYR 910.0061
TYR 920.0053
PHE 930.0045
CYS 940.0038
SER 950.0042
ALA 960.0044
LEU 970.0045
SER 980.0044
ASN 990.0046
SER 1000.0048
ILE 1010.0056
MET 1020.0054
TYR 1030.0050
PHE 1040.0048
SER 1050.0046
HIS 1060.0041
PHE 1070.0045
VAL 1080.0038
PRO 1090.0052
VAL 1100.0064
PHE 1110.0083
LEU 1120.0107
PRO 1130.0100
ALA 1140.0106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.