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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1711
MET 10.0002
SER 20.0001
THR 30.0001
ILE 40.0001
THR 50.0001
LYS 60.0001
ASP 70.0001
GLN 80.0001
ILE 90.0001
LEU 100.0001
GLU 110.0001
GLY 120.0001
VAL 130.0001
ALA 140.0000
ALA 150.0001
LEU 160.0000
SER 170.0001
VAL 180.0001
MET 190.0001
GLU 200.0000
ILE 210.0001
VAL 220.0001
GLU 230.0001
LEU 240.0001
ILE 250.0002
SER 260.0001
ALA 270.0002
MET 280.0002
GLU 290.0001
GLU 300.0001
LYS 310.0003
PHE 320.0002
GLY 330.0001
VAL 340.0003
SER 350.0004
ALA 360.0006
ALA 370.0007
ALA 380.0004
VAL 390.0004
ALA 400.0007
ALA 410.0005
GLY 420.0007
PRO 430.0007
ALA 440.0008
ALA 450.0006
ALA 460.0008
VAL 470.0008
GLU 480.0012
ALA 490.0012
ALA 500.0007
GLU 510.0007
GLU 520.0006
GLN 530.0007
THR 540.0008
GLU 550.0010
PHE 560.0008
ASP 570.0008
VAL 580.0006
VAL 590.0007
LEU 600.0006
ALA 610.0008
SER 620.0007
PHE 630.0006
GLY 640.0005
GLU 650.0006
ASN 660.0007
LYS 670.0009
VAL 680.0010
ALA 690.0007
VAL 700.0006
ILE 710.0008
LYS 720.0008
ALA 730.0004
VAL 740.0005
ARG 750.0007
GLY 760.0004
ALA 770.0002
THR 780.0006
GLY 790.0007
LEU 800.0011
GLY 810.0017
LEU 820.0017
LYS 830.0020
GLU 840.0018
ALA 850.0013
LYS 860.0013
ASP 870.0014
LEU 880.0012
VAL 890.0009
GLU 900.0011
SER 910.0011
ALA 920.0010
PRO 930.0010
ALA 940.0009
VAL 950.0008
LEU 960.0006
LYS 970.0007
GLU 980.0008
GLY 990.0010
VAL 1000.0008
ASN 1010.0009
LYS 1020.0008
ASP 1030.0008
GLU 1040.0008
ALA 1050.0007
GLU 1060.0006
THR 1070.0005
LEU 1080.0004
LYS 1090.0004
LYS 1100.0003
SER 1110.0001
LEU 1120.0002
GLU 1130.0001
GLU 1140.0002
ALA 1150.0003
GLY 1160.0003
ALA 1170.0003
SER 1180.0004
VAL 1190.0005
GLU 1200.0007
ILE 1210.0008
LYS 1220.0006
GLU 1230.0007
ALA 1240.0008
ALA 1250.0009
ALA 1260.0020
LYS 1270.0026
ALA 1280.0030
TYR 1290.0036
LYS 1300.0042
ILE 1310.0056
ILE 1320.0063
SER 1330.0060
LEU 1340.0066
LYS 1350.0064
TYR 1360.0058
THR 1370.0040
ARG 1380.0015
LYS 1390.0013
VAL 1400.0027
CYS 1410.0063
ILE 1420.0061
GLY 1430.0063
PRO 1440.0049
GLY 1450.0053
PRO 1460.0066
GLY 1470.0096
LYS 1480.0075
ALA 1490.0048
TYR 1500.0026
LYS 1510.0020
ILE 1520.0016
ILE 1530.0017
SER 1540.0014
LEU 1550.0015
LYS 1560.0013
TYR 1570.0021
THR 1580.0022
ARG 1590.0036
LYS 1600.0035
VAL 1610.0049
CYS 1620.0049
GLY 1630.0069
PRO 1640.0067
GLY 1650.0049
PRO 1660.0044
GLY 1670.0069
GLY 1680.0099
LYS 1690.0087
ALA 1700.0075
TYR 1710.0051
LYS 1720.0053
ILE 1730.0034
ILE 1740.0040
SER 1750.0031
LEU 1760.0036
LYS 1770.0035
TYR 1780.0037
THR 1790.0038
ARG 1800.0039
LYS 1810.0035
VAL 1820.0020
GLY 1830.0011
PRO 1840.0015
GLY 1850.0023
PRO 1860.0032
GLY 1870.0021
ILE 1880.0018
ILE 1890.0010
SER 1900.0008
LEU 1910.0020
LYS 1920.0030
TYR 1930.0039
THR 1940.0047
ARG 1950.0059
LYS 1960.0062
VAL 1970.0061
CYS 1980.0051
ILE 1990.0054
GLN 2000.0045
LEU 2010.0032
GLY 2020.0028
GLY 2030.0018
PRO 2040.0010
GLY 2050.0010
PRO 2060.0008
GLY 2070.0007
ASN 2080.0006
ILE 2090.0008
LYS 2100.0011
THR 2110.0015
ALA 2120.0015
PHE 2130.0017
HIS 2140.0019
CYS 2150.0018
TYR 2160.0028
ALA 2170.0030
ALA 2180.0026
TYR 2190.0029
MET 2200.0035
THR 2210.0037
SER 2220.0036
ILE 2230.0052
LYS 2240.0057
ALA 2250.0076
CYS 2260.0300
ASP 2270.0612
LEU 2280.0321
LYS 2290.0480
LYS 2300.0196
PRO 2310.0395
LEU 2320.0405
MET 2330.0313
GLU 2340.0557
SER 2350.0490
GLY 2360.0198
TRP 2370.0138
SER 2380.0222
ASP 2390.0361
THR 2400.0469
ALA 2410.1711
HIS 2420.1000
GLY 2430.0800
LYS 2440.0214
LYS 2450.0142
SER 2460.0166
LEU 2470.0147
PRO 2480.0258
SER 2490.0290
SER 2500.0251
SER 2510.0255
SER 2520.0224
TYR 2530.0174
SER 2540.0282
TYR 2550.0332
ARG 2560.0280
ARG 2570.0232
LYS 2580.0242
LEU 2590.0194
THR 2600.0201
ASN 2610.0183
PRO 2620.0236
ALA 2630.0269
ASN 2640.0336
LYS 2650.0340
GLU 2660.0283
GLU 2670.0281
SER 2680.0308
ILE 2690.0323
LYS 2700.0343
LYS 2710.0432
GLN 2720.0353
LYS 2730.0216
TYR 2740.0165
SER 2750.0193
TYR 2760.0458
PRO 2770.0493
TRP 2780.0261
GLN 2790.0440
THR 2800.0470
SER 2810.0437
LYS 2820.0447
CYS 2830.0441
PHE 2840.0433
ASP 2880.0083
TYR 2890.0041
GLN 2900.0040
TYR 2910.0034
CYS 2970.0082
ASN 2980.0058
PRO 2990.0031
GLY 3000.0007
LYS 3010.0020
LYS 3020.0034
ASN 3030.0029
THR 3040.0034
ILE 3050.0027
SER 3060.0024
GLY 3070.0020
TYR 3080.0021
LYS 3090.0019
ARG 3100.0022
MET 3110.0025
MET 3120.0023
ALA 3130.0026
THR 3140.0031
LYS 3150.0029
ASP 3160.0034
SER 3170.0040
PHE 3180.0031
GLN 3190.0027
SER 3200.0015
PHE 3210.0019
ASN 3220.0018
LEU 3230.0016
THR 3240.0018
GLU 3250.0022
PRO 3260.0022
HIS 3270.0033
ILE 3280.0036
THR 3290.0047
THR 3300.0051
ASN 3310.0046
LYS 3320.0037
LEU 3330.0027
GLU 3340.0027
TRP 3350.0019
ILE 3360.0023
ASP 3370.0022
PRO 3380.0024
ASP 3390.0017
GLY 3400.0020
ASN 3410.0014
THR 3420.0023
ARG 3430.0040
GLY 3440.0037
GLY 3450.0019
GLY 3460.0062
GLY 10.0015
SER 20.0015
HIS 30.0015
SER 40.0014
MET 50.0014
ARG 60.0012
TYR 70.0011
PHE 80.0010
PHE 90.0009
THR 100.0008
SER 110.0008
VAL 120.0008
SER 130.0008
ARG 140.0007
PRO 150.0009
GLY 160.0009
ARG 170.0008
GLY 180.0008
GLU 190.0009
PRO 200.0009
ARG 210.0008
PHE 220.0009
ILE 230.0008
ALA 240.0009
VAL 250.0009
GLY 260.0012
TYR 270.0013
VAL 280.0014
ASP 290.0015
ASP 300.0014
THR 310.0014
GLN 320.0013
PHE 330.0013
VAL 340.0012
ARG 350.0011
PHE 360.0010
ASP 370.0009
SER 380.0009
ASP 390.0007
ALA 400.0007
ALA 410.0009
SER 420.0010
GLN 430.0010
ARG 440.0011
MET 450.0012
GLU 460.0012
PRO 470.0012
ARG 480.0012
ALA 490.0013
PRO 500.0014
TRP 510.0016
ILE 520.0015
GLU 530.0015
GLN 540.0016
GLU 550.0016
GLY 560.0015
PRO 570.0014
GLU 580.0016
TYR 590.0016
TRP 600.0014
ASP 610.0014
GLY 620.0015
GLU 630.0014
THR 640.0013
ARG 650.0014
LYS 660.0012
VAL 670.0010
LYS 680.0010
ALA 690.0011
HIS 700.0010
SER 710.0008
GLN 720.0008
THR 730.0009
HIS 740.0009
ARG 750.0009
VAL 760.0010
ASP 770.0010
LEU 780.0010
GLY 790.0011
THR 800.0013
LEU 810.0014
ARG 820.0018
GLY 830.0022
TYR 840.0020
TYR 850.0021
ASN 860.0034
GLN 870.0028
SER 880.0025
GLU 890.0020
ALA 900.0015
GLY 910.0011
SER 920.0009
HIS 930.0009
THR 940.0008
VAL 950.0007
GLN 960.0007
ARG 970.0008
MET 980.0009
TYR 990.0010
GLY 1000.0012
CYS 1010.0014
ASP 1020.0014
VAL 1030.0015
GLY 1040.0015
SER 1050.0015
ASP 1060.0016
TRP 1070.0016
ARG 1080.0016
PHE 1090.0016
LEU 1100.0015
ARG 1110.0012
GLY 1120.0011
TYR 1130.0010
HIS 1140.0009
GLN 1150.0008
TYR 1160.0006
ALA 1170.0007
TYR 1180.0007
ASP 1190.0008
GLY 1200.0008
LYS 1210.0005
ASP 1220.0005
TYR 1230.0005
ILE 1240.0005
ALA 1250.0005
LEU 1260.0008
LYS 1270.0007
GLU 1280.0008
ASP 1290.0009
LEU 1300.0010
ARG 1310.0009
SER 1320.0008
TRP 1330.0007
THR 1340.0006
ALA 1350.0005
ALA 1360.0007
ASP 1370.0007
MET 1380.0007
ALA 1390.0008
ALA 1400.0007
GLN 1410.0006
THR 1420.0006
THR 1430.0007
LYS 1440.0007
HIS 1450.0007
LYS 1460.0009
TRP 1470.0010
GLU 1480.0010
ALA 1490.0011
ALA 1500.0012
HIS 1510.0013
VAL 1520.0013
ALA 1530.0012
GLU 1540.0013
GLN 1550.0014
LEU 1560.0014
ARG 1570.0013
ALA 1580.0014
TYR 1590.0014
LEU 1600.0013
GLU 1610.0015
GLY 1620.0015
THR 1630.0016
CYS 1640.0016
VAL 1650.0015
GLU 1660.0017
TRP 1670.0017
LEU 1680.0017
ARG 1690.0017
ARG 1700.0017
TYR 1710.0017
LEU 1720.0017
GLU 1730.0018
ASN 1740.0017
GLY 1750.0017
LYS 1760.0018
GLU 1770.0017
THR 1780.0017
LEU 1790.0017
GLN 1800.0018
ARG 1810.0020
THR 1820.0017
ASP 1830.0015
ALA 1840.0013
PRO 1850.0010
LYS 1860.0009
THR 1870.0006
HIS 1880.0007
MET 1890.0008
THR 1900.0010
HIS 1910.0014
HIS 1920.0017
ALA 1930.0024
VAL 1940.0027
SER 1950.0033
ASP 1960.0035
HIS 1970.0033
GLU 1980.0027
ALA 1990.0022
THR 2000.0017
LEU 2010.0013
ARG 2020.0008
CYS 2030.0005
TRP 2040.0001
ALA 2050.0004
LEU 2060.0008
SER 2070.0010
PHE 2080.0012
TYR 2090.0014
PRO 2100.0015
ALA 2110.0013
GLU 2120.0012
ILE 2130.0008
THR 2140.0006
LEU 2150.0004
THR 2160.0007
TRP 2170.0009
GLN 2180.0010
ARG 2190.0014
ASP 2200.0014
GLY 2210.0009
GLU 2220.0012
ASP 2230.0013
GLN 2240.0016
THR 2250.0018
GLN 2260.0018
ASP 2270.0017
THR 2280.0016
GLU 2290.0016
LEU 2300.0015
VAL 2310.0009
GLU 2320.0011
THR 2330.0010
ARG 2340.0009
PRO 2350.0010
ALA 2360.0010
GLY 2370.0013
ASP 2380.0015
GLY 2390.0017
THR 2400.0013
PHE 2410.0011
GLN 2420.0006
LYS 2430.0005
TRP 2440.0004
ALA 2450.0007
ALA 2460.0013
VAL 2470.0015
VAL 2480.0019
VAL 2490.0020
PRO 2500.0024
SER 2510.0028
GLY 2520.0029
GLN 2530.0026
GLU 2540.0021
GLN 2550.0022
ARG 2560.0019
TYR 2570.0015
THR 2580.0010
CYS 2590.0006
HIS 2600.0001
VAL 2610.0002
GLN 2620.0005
HIS 2630.0009
GLU 2640.0014
GLY 2650.0015
LEU 2660.0013
PRO 2670.0016
LYS 2680.0012
PRO 2690.0008
LEU 2700.0007
THR 2710.0008
LEU 2720.0010
ARG 2730.0014
TRP 2740.0016
GLU 2750.0021
PRO 2760.0023
GLN 2780.0007
ARG 2790.0006
THR 2800.0007
PRO 2810.0007
LYS 2820.0008
ILE 2830.0007
GLN 2840.0005
VAL 2850.0004
TYR 2860.0004
SER 2870.0005
ARG 2880.0009
HIS 2890.0010
PRO 2900.0010
ALA 2910.0009
GLU 2920.0012
ASN 2930.0011
GLY 2940.0012
LYS 2950.0013
SER 2960.0011
ASN 2970.0010
PHE 2980.0008
LEU 2990.0005
ASN 3000.0006
CYS 3010.0006
TYR 3020.0007
VAL 3030.0007
SER 3040.0007
GLY 3050.0008
PHE 3060.0007
HIS 3070.0007
PRO 3080.0008
SER 3090.0008
ASP 3100.0007
ILE 3110.0007
GLU 3120.0007
VAL 3130.0008
ASP 3140.0007
LEU 3150.0005
LEU 3160.0005
LYS 3170.0004
ASN 3180.0006
GLY 3190.0008
GLU 3200.0008
ARG 3210.0008
ILE 3220.0007
GLU 3230.0010
LYS 3240.0011
VAL 3250.0009
GLU 3260.0010
HIS 3270.0010
SER 3280.0008
ASP 3290.0009
LEU 3300.0008
SER 3310.0008
PHE 3320.0008
SER 3330.0007
LYS 3340.0005
ASP 3350.0004
TRP 3360.0004
SER 3370.0007
PHE 3380.0008
TYR 3390.0008
LEU 3400.0008
LEU 3410.0008
TYR 3420.0008
TYR 3430.0008
THR 3440.0008
GLU 3450.0008
PHE 3460.0006
THR 3470.0007
PRO 3480.0007
THR 3490.0008
GLU 3500.0010
LYS 3510.0010
ASP 3520.0006
GLU 3530.0005
TYR 3540.0003
ALA 3550.0004
CYS 3560.0005
ARG 3570.0007
VAL 3580.0007
ASN 3590.0007
HIS 3600.0007
VAL 3610.0008
THR 3620.0007
LEU 3630.0008
SER 3640.0009
GLN 3650.0008
PRO 3660.0008
LYS 3670.0007
ILE 3680.0008
VAL 3690.0006
LYS 3700.0005
TRP 3710.0003
ASP 3720.0004
ARG 3730.0005
ASP 3740.0005
MET 3750.0005
SER 10.0010
GLN 20.0011
PHE 30.0014
ARG 40.0015
VAL 50.0018
SER 60.0024
PRO 70.0027
LEU 80.0025
ASP 90.0029
ARG 100.0030
THR 110.0028
TRP 120.0026
ASN 130.0025
LEU 140.0022
GLY 150.0025
GLU 160.0031
THR 170.0031
VAL 180.0028
GLU 190.0029
LEU 200.0025
LYS 210.0024
CYS 220.0020
GLN 230.0018
VAL 240.0015
LEU 250.0012
LEU 260.0014
SER 270.0015
ASN 280.0015
PRO 290.0015
THR 300.0015
SER 310.0021
GLY 320.0022
CYS 330.0021
SER 340.0019
TRP 350.0019
LEU 360.0015
PHE 370.0013
GLN 380.0010
PRO 390.0012
ARG 400.0016
GLY 410.0014
ALA 420.0015
ALA 430.0011
ALA 440.0008
SER 450.0004
PRO 460.0008
THR 470.0011
PHE 480.0015
LEU 490.0019
LEU 500.0023
TYR 510.0024
LEU 520.0024
SER 530.0024
GLN 540.0025
ASN 550.0027
LYS 560.0033
PRO 570.0030
LYS 580.0028
ALA 590.0026
ALA 600.0023
GLU 610.0026
GLY 620.0025
LEU 630.0026
ASP 640.0027
THR 650.0029
GLN 660.0032
ARG 670.0029
PHE 680.0027
SER 690.0029
GLY 700.0029
LYS 710.0029
ARG 720.0028
LEU 730.0029
GLY 740.0027
ASP 750.0022
THR 760.0024
PHE 770.0024
VAL 780.0026
LEU 790.0026
THR 800.0029
LEU 810.0026
SER 820.0030
ASP 830.0028
PHE 840.0023
ARG 850.0019
ARG 860.0013
GLU 870.0011
ASN 880.0014
GLU 890.0015
GLY 900.0017
TYR 910.0016
TYR 920.0017
PHE 930.0017
CYS 940.0019
SER 950.0017
ALA 960.0018
LEU 970.0018
SER 980.0019
ASN 990.0020
SER 1000.0019
ILE 1010.0018
MET 1020.0016
TYR 1030.0016
PHE 1040.0015
SER 1050.0017
HIS 1060.0015
PHE 1070.0016
VAL 1080.0020
PRO 1090.0021
VAL 1100.0023
PHE 1110.0021
LEU 1120.0022
PRO 1130.0029
ALA 1140.0032
SER 10.0006
GLN 20.0012
PHE 30.0014
ARG 40.0017
VAL 50.0016
SER 60.0023
PRO 70.0026
LEU 80.0025
ASP 90.0033
ARG 100.0031
THR 110.0029
TRP 120.0024
ASN 130.0024
LEU 140.0016
GLY 150.0014
GLU 160.0020
THR 170.0020
VAL 180.0017
GLU 190.0021
LEU 200.0018
LYS 210.0020
CYS 220.0017
GLN 230.0021
VAL 240.0020
LEU 250.0019
LEU 260.0019
SER 270.0023
ASN 280.0025
PRO 290.0023
THR 300.0026
SER 310.0025
GLY 320.0024
CYS 330.0019
SER 340.0017
TRP 350.0013
LEU 360.0010
PHE 370.0007
GLN 380.0010
PRO 390.0014
ARG 400.0018
GLY 410.0017
ALA 420.0018
ALA 430.0019
ALA 440.0015
SER 450.0014
PRO 460.0013
THR 470.0015
PHE 480.0016
LEU 490.0016
LEU 500.0019
TYR 510.0022
LEU 520.0023
SER 530.0022
GLN 540.0023
ASN 550.0025
LYS 560.0029
PRO 570.0026
LYS 580.0025
ALA 590.0024
ALA 600.0023
GLU 610.0024
GLY 620.0025
LEU 630.0022
ASP 640.0024
THR 650.0025
GLN 660.0027
ARG 670.0020
PHE 680.0019
SER 690.0023
GLY 700.0023
LYS 710.0026
ARG 720.0027
LEU 730.0030
GLY 740.0031
ASP 750.0025
THR 760.0023
PHE 770.0022
VAL 780.0021
LEU 790.0017
THR 800.0019
LEU 810.0015
SER 820.0017
ASP 830.0011
PHE 840.0007
ARG 850.0006
ARG 860.0016
GLU 870.0016
ASN 880.0007
GLU 890.0013
GLY 900.0012
TYR 910.0006
TYR 920.0002
PHE 930.0004
CYS 940.0010
SER 950.0014
ALA 960.0018
LEU 970.0021
SER 980.0023
ASN 990.0025
SER 1000.0025
ILE 1010.0022
MET 1020.0018
TYR 1030.0013
PHE 1040.0008
SER 1050.0006
HIS 1060.0005
PHE 1070.0007
VAL 1080.0010
PRO 1090.0014
VAL 1100.0013
PHE 1110.0020
LEU 1120.0026
PRO 1130.0036
ALA 1140.0043

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.