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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 73  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0923
MET 10.0002
SER 20.0004
THR 30.0003
ILE 40.0002
THR 50.0005
LYS 60.0007
ASP 70.0004
GLN 80.0001
ILE 90.0006
LEU 100.0005
GLU 110.0004
GLY 120.0005
VAL 130.0007
ALA 140.0007
ALA 150.0008
LEU 160.0008
SER 170.0010
VAL 180.0011
MET 190.0010
GLU 200.0008
ILE 210.0007
VAL 220.0008
GLU 230.0007
LEU 240.0006
ILE 250.0006
SER 260.0006
ALA 270.0011
MET 280.0008
GLU 290.0008
GLU 300.0014
LYS 310.0017
PHE 320.0013
GLY 330.0017
VAL 340.0014
SER 350.0014
ALA 360.0021
ALA 370.0018
ALA 380.0016
VAL 390.0013
ALA 400.0015
ALA 410.0027
GLY 420.0038
PRO 430.0038
ALA 440.0065
ALA 450.0057
ALA 460.0062
VAL 470.0065
GLU 480.0103
ALA 490.0109
ALA 500.0096
GLU 510.0066
GLU 520.0057
GLN 530.0041
THR 540.0033
GLU 550.0017
PHE 560.0020
ASP 570.0020
VAL 580.0020
VAL 590.0024
LEU 600.0025
ALA 610.0031
SER 620.0034
PHE 630.0031
GLY 640.0038
GLU 650.0040
ASN 660.0033
LYS 670.0030
VAL 680.0025
ALA 690.0024
VAL 700.0024
ILE 710.0022
LYS 720.0019
ALA 730.0020
VAL 740.0019
ARG 750.0021
GLY 760.0018
ALA 770.0019
THR 780.0022
GLY 790.0027
LEU 800.0029
GLY 810.0037
LEU 820.0034
LYS 830.0041
GLU 840.0036
ALA 850.0027
LYS 860.0032
ASP 870.0032
LEU 880.0027
VAL 890.0027
GLU 900.0031
SER 910.0026
ALA 920.0024
PRO 930.0023
ALA 940.0023
VAL 950.0022
LEU 960.0014
LYS 970.0010
GLU 980.0015
GLY 990.0012
VAL 1000.0010
ASN 1010.0015
LYS 1020.0028
ASP 1030.0033
GLU 1040.0025
ALA 1050.0025
GLU 1060.0036
THR 1070.0035
LEU 1080.0026
LYS 1090.0032
LYS 1100.0039
SER 1110.0033
LEU 1120.0029
GLU 1130.0039
GLU 1140.0040
ALA 1150.0032
GLY 1160.0037
ALA 1170.0034
SER 1180.0038
VAL 1190.0032
GLU 1200.0033
ILE 1210.0022
LYS 1220.0022
GLU 1230.0022
ALA 1240.0020
ALA 1250.0027
ALA 1260.0030
LYS 1270.0036
ALA 1280.0036
TYR 1290.0034
LYS 1300.0037
ILE 1310.0051
ILE 1320.0061
SER 1330.0058
LEU 1340.0068
LYS 1350.0067
TYR 1360.0071
THR 1370.0059
ARG 1380.0054
LYS 1390.0052
VAL 1400.0037
CYS 1410.0028
ILE 1420.0035
GLY 1430.0053
PRO 1440.0061
GLY 1450.0083
PRO 1460.0107
GLY 1470.0126
LYS 1480.0117
ALA 1490.0094
TYR 1500.0065
LYS 1510.0055
ILE 1520.0044
ILE 1530.0033
SER 1540.0021
LEU 1550.0014
LYS 1560.0015
TYR 1570.0031
THR 1580.0031
ARG 1590.0048
LYS 1600.0045
VAL 1610.0057
CYS 1620.0060
GLY 1630.0084
PRO 1640.0095
GLY 1650.0082
PRO 1660.0106
GLY 1670.0143
GLY 1680.0163
LYS 1690.0142
ALA 1700.0113
TYR 1710.0091
LYS 1720.0084
ILE 1730.0064
ILE 1740.0061
SER 1750.0044
LEU 1760.0028
LYS 1770.0019
TYR 1780.0013
THR 1790.0027
ARG 1800.0038
LYS 1810.0049
VAL 1820.0064
GLY 1830.0074
PRO 1840.0083
GLY 1850.0073
PRO 1860.0043
GLY 1870.0038
ILE 1880.0037
ILE 1890.0033
SER 1900.0030
LEU 1910.0035
LYS 1920.0039
TYR 1930.0047
THR 1940.0050
ARG 1950.0064
LYS 1960.0061
VAL 1970.0063
CYS 1980.0053
ILE 1990.0057
GLN 2000.0049
LEU 2010.0039
GLY 2020.0034
GLY 2030.0024
PRO 2040.0015
GLY 2050.0014
PRO 2060.0007
GLY 2070.0007
ASN 2080.0009
ILE 2090.0015
LYS 2100.0017
THR 2110.0027
ALA 2120.0027
PHE 2130.0026
HIS 2140.0026
CYS 2150.0026
TYR 2160.0040
ALA 2170.0040
ALA 2180.0036
TYR 2190.0037
MET 2200.0041
THR 2210.0063
SER 2220.0070
ILE 2230.0069
LYS 2240.0071
ALA 2250.0071
CYS 2260.0223
ASP 2270.0246
LEU 2280.0307
LYS 2290.0469
LYS 2300.0557
PRO 2310.0814
LEU 2320.0523
MET 2330.0382
GLU 2340.0380
SER 2350.0307
GLY 2360.0304
TRP 2370.0225
SER 2380.0369
ASP 2390.0446
THR 2400.0622
ALA 2410.0709
HIS 2420.0500
GLY 2430.0416
LYS 2440.0477
LYS 2450.0923
SER 2460.0545
LEU 2470.0571
PRO 2480.0551
SER 2490.0497
SER 2500.0514
SER 2510.0550
SER 2520.0355
TYR 2530.0204
SER 2540.0179
TYR 2550.0287
ARG 2560.0313
ARG 2570.0241
LYS 2580.0175
LEU 2590.0180
THR 2600.0257
ASN 2610.0338
PRO 2620.0483
ALA 2630.0536
ASN 2640.0411
LYS 2650.0328
GLU 2660.0276
GLU 2670.0298
SER 2680.0273
ILE 2690.0279
LYS 2700.0416
LYS 2710.0366
GLN 2720.0333
LYS 2730.0212
TYR 2740.0207
SER 2750.0201
TYR 2760.0208
PRO 2770.0237
TRP 2780.0308
GLN 2790.0298
THR 2800.0213
SER 2810.0205
LYS 2820.0156
CYS 2830.0175
PHE 2840.0177
ASP 2880.0025
TYR 2890.0014
GLN 2900.0022
TYR 2910.0046
CYS 2970.0215
ASN 2980.0231
PRO 2990.0062
GLY 3000.0084
LYS 3010.0056
LYS 3020.0082
ASN 3030.0085
THR 3040.0084
ILE 3050.0086
SER 3060.0090
GLY 3070.0062
TYR 3080.0050
LYS 3090.0056
ARG 3100.0041
MET 3110.0019
MET 3120.0032
ALA 3130.0024
THR 3140.0011
LYS 3150.0026
ASP 3160.0034
SER 3170.0028
PHE 3180.0027
GLN 3190.0035
SER 3200.0042
PHE 3210.0047
ASN 3220.0047
LEU 3230.0071
THR 3240.0098
GLU 3250.0125
PRO 3260.0119
HIS 3270.0168
ILE 3280.0176
THR 3290.0200
THR 3300.0217
ASN 3310.0201
LYS 3320.0187
LEU 3330.0148
GLU 3340.0136
TRP 3350.0109
ILE 3360.0100
ASP 3370.0069
PRO 3380.0076
ASP 3390.0068
GLY 3400.0065
ASN 3410.0061
THR 3420.0053
ARG 3430.0083
GLY 3440.0049
GLY 3450.0032
GLY 3460.0101
GLY 10.0032
SER 20.0032
HIS 30.0026
SER 40.0025
MET 50.0021
ARG 60.0020
TYR 70.0018
PHE 80.0020
PHE 90.0018
THR 100.0021
SER 110.0020
VAL 120.0024
SER 130.0023
ARG 140.0024
PRO 150.0025
GLY 160.0025
ARG 170.0023
GLY 180.0019
GLU 190.0018
PRO 200.0021
ARG 210.0024
PHE 220.0020
ILE 230.0022
ALA 240.0018
VAL 250.0020
GLY 260.0018
TYR 270.0021
VAL 280.0021
ASP 290.0027
ASP 300.0030
THR 310.0028
GLN 320.0025
PHE 330.0022
VAL 340.0021
ARG 350.0023
PHE 360.0023
ASP 370.0027
SER 380.0026
ASP 390.0034
ALA 400.0038
ALA 410.0048
SER 420.0044
GLN 430.0037
ARG 440.0033
MET 450.0027
GLU 460.0028
PRO 470.0027
ARG 480.0029
ALA 490.0028
PRO 500.0030
TRP 510.0025
ILE 520.0025
GLU 530.0033
GLN 540.0034
GLU 550.0033
GLY 560.0044
PRO 570.0049
GLU 580.0049
TYR 590.0037
TRP 600.0036
ASP 610.0041
GLY 620.0036
GLU 630.0026
THR 640.0029
ARG 650.0031
LYS 660.0020
VAL 670.0014
LYS 680.0018
ALA 690.0014
HIS 700.0010
SER 710.0011
GLN 720.0009
THR 730.0011
HIS 740.0015
ARG 750.0017
VAL 760.0020
ASP 770.0021
LEU 780.0024
GLY 790.0026
THR 800.0027
LEU 810.0024
ARG 820.0029
GLY 830.0032
TYR 840.0028
TYR 850.0028
ASN 860.0038
GLN 870.0035
SER 880.0036
GLU 890.0031
ALA 900.0032
GLY 910.0028
SER 920.0025
HIS 930.0024
THR 940.0022
VAL 950.0019
GLN 960.0019
ARG 970.0018
MET 980.0019
TYR 990.0019
GLY 1000.0020
CYS 1010.0025
ASP 1020.0029
VAL 1030.0032
GLY 1040.0037
SER 1050.0038
ASP 1060.0042
TRP 1070.0034
ARG 1080.0038
PHE 1090.0034
LEU 1100.0036
ARG 1110.0026
GLY 1120.0023
TYR 1130.0021
HIS 1140.0018
GLN 1150.0018
TYR 1160.0017
ALA 1170.0018
TYR 1180.0019
ASP 1190.0020
GLY 1200.0018
LYS 1210.0015
ASP 1220.0016
TYR 1230.0016
ILE 1240.0017
ALA 1250.0017
LEU 1260.0019
LYS 1270.0018
GLU 1280.0019
ASP 1290.0019
LEU 1300.0020
ARG 1310.0018
SER 1320.0017
TRP 1330.0017
THR 1340.0016
ALA 1350.0017
ALA 1360.0011
ASP 1370.0013
MET 1380.0016
ALA 1390.0019
ALA 1400.0017
GLN 1410.0020
THR 1420.0024
THR 1430.0025
LYS 1440.0023
HIS 1450.0027
LYS 1460.0031
TRP 1470.0028
GLU 1480.0028
ALA 1490.0033
ALA 1500.0034
HIS 1510.0029
VAL 1520.0028
ALA 1530.0022
GLU 1540.0023
GLN 1550.0027
LEU 1560.0023
ARG 1570.0021
ALA 1580.0024
TYR 1590.0025
LEU 1600.0023
GLU 1610.0028
GLY 1620.0030
THR 1630.0028
CYS 1640.0025
VAL 1650.0028
GLU 1660.0032
TRP 1670.0026
LEU 1680.0023
ARG 1690.0027
ARG 1700.0026
TYR 1710.0021
LEU 1720.0022
GLU 1730.0022
ASN 1740.0022
GLY 1750.0021
LYS 1760.0021
GLU 1770.0025
THR 1780.0027
LEU 1790.0026
GLN 1800.0027
ARG 1810.0037
THR 1820.0032
ASP 1830.0029
ALA 1840.0026
PRO 1850.0022
LYS 1860.0018
THR 1870.0012
HIS 1880.0008
MET 1890.0007
THR 1900.0008
HIS 1910.0011
HIS 1920.0012
ALA 1930.0017
VAL 1940.0019
SER 1950.0024
ASP 1960.0027
HIS 1970.0026
GLU 1980.0022
ALA 1990.0018
THR 2000.0015
LEU 2010.0013
ARG 2020.0010
CYS 2030.0010
TRP 2040.0011
ALA 2050.0015
LEU 2060.0020
SER 2070.0025
PHE 2080.0026
TYR 2090.0030
PRO 2100.0031
ALA 2110.0031
GLU 2120.0030
ILE 2130.0023
THR 2140.0022
LEU 2150.0018
THR 2160.0023
TRP 2170.0021
GLN 2180.0024
ARG 2190.0026
ASP 2200.0029
GLY 2210.0031
GLU 2220.0032
ASP 2230.0029
GLN 2240.0027
THR 2250.0028
GLN 2260.0026
ASP 2270.0023
THR 2280.0022
GLU 2290.0020
LEU 2300.0020
VAL 2310.0018
GLU 2320.0022
THR 2330.0022
ARG 2340.0022
PRO 2350.0025
ALA 2360.0026
GLY 2370.0030
ASP 2380.0031
GLY 2390.0032
THR 2400.0029
PHE 2410.0025
GLN 2420.0019
LYS 2430.0017
TRP 2440.0013
ALA 2450.0015
ALA 2460.0017
VAL 2470.0019
VAL 2480.0020
VAL 2490.0021
PRO 2500.0024
SER 2510.0026
GLY 2520.0029
GLN 2530.0028
GLU 2540.0022
GLN 2550.0023
ARG 2560.0024
TYR 2570.0020
THR 2580.0017
CYS 2590.0015
HIS 2600.0018
VAL 2610.0015
GLN 2620.0020
HIS 2630.0024
GLU 2640.0030
GLY 2650.0028
LEU 2660.0025
PRO 2670.0027
LYS 2680.0021
PRO 2690.0019
LEU 2700.0013
THR 2710.0013
LEU 2720.0010
ARG 2730.0013
TRP 2740.0014
GLU 2750.0017
PRO 2760.0017
GLN 2780.0019
ARG 2790.0018
THR 2800.0019
PRO 2810.0018
LYS 2820.0020
ILE 2830.0023
GLN 2840.0021
VAL 2850.0021
TYR 2860.0021
SER 2870.0022
ARG 2880.0025
HIS 2890.0024
PRO 2900.0022
ALA 2910.0022
GLU 2920.0022
ASN 2930.0022
GLY 2940.0024
LYS 2950.0025
SER 2960.0027
ASN 2970.0026
PHE 2980.0025
LEU 2990.0023
ASN 3000.0024
CYS 3010.0024
TYR 3020.0025
VAL 3030.0022
SER 3040.0022
GLY 3050.0022
PHE 3060.0020
HIS 3070.0018
PRO 3080.0021
SER 3090.0021
ASP 3100.0020
ILE 3110.0020
GLU 3120.0020
VAL 3130.0023
ASP 3140.0023
LEU 3150.0023
LEU 3160.0023
LYS 3170.0023
ASN 3180.0023
GLY 3190.0024
GLU 3200.0025
ARG 3210.0025
ILE 3220.0025
GLU 3230.0026
LYS 3240.0028
VAL 3250.0027
GLU 3260.0028
HIS 3270.0028
SER 3280.0027
ASP 3290.0024
LEU 3300.0025
SER 3310.0023
PHE 3320.0024
SER 3330.0012
LYS 3340.0011
ASP 3350.0015
TRP 3360.0017
SER 3370.0019
PHE 3380.0024
TYR 3390.0024
LEU 3400.0024
LEU 3410.0024
TYR 3420.0025
TYR 3430.0026
THR 3440.0027
GLU 3450.0026
PHE 3460.0024
THR 3470.0023
PRO 3480.0022
THR 3490.0022
GLU 3500.0021
LYS 3510.0021
ASP 3520.0022
GLU 3530.0021
TYR 3540.0022
ALA 3550.0022
CYS 3560.0022
ARG 3570.0022
VAL 3580.0020
ASN 3590.0017
HIS 3600.0018
VAL 3610.0018
THR 3620.0021
LEU 3630.0022
SER 3640.0023
GLN 3650.0016
PRO 3660.0013
LYS 3670.0019
ILE 3680.0022
VAL 3690.0021
LYS 3700.0020
TRP 3710.0020
ASP 3720.0019
ARG 3730.0015
ASP 3740.0011
MET 3750.0012
SER 10.0022
GLN 20.0021
PHE 30.0022
ARG 40.0022
VAL 50.0025
SER 60.0028
PRO 70.0026
LEU 80.0031
ASP 90.0033
ARG 100.0029
THR 110.0035
TRP 120.0030
ASN 130.0036
LEU 140.0037
GLY 150.0039
GLU 160.0022
THR 170.0012
VAL 180.0012
GLU 190.0016
LEU 200.0023
LYS 210.0027
CYS 220.0025
GLN 230.0024
VAL 240.0022
LEU 250.0021
LEU 260.0023
SER 270.0021
ASN 280.0021
PRO 290.0022
THR 300.0022
SER 310.0032
GLY 320.0031
CYS 330.0029
SER 340.0027
TRP 350.0026
LEU 360.0027
PHE 370.0021
GLN 380.0021
PRO 390.0017
ARG 400.0020
GLY 410.0024
ALA 420.0024
ALA 430.0026
ALA 440.0024
SER 450.0026
PRO 460.0023
THR 470.0022
PHE 480.0025
LEU 490.0024
LEU 500.0028
TYR 510.0031
LEU 520.0033
SER 530.0034
GLN 540.0036
ASN 550.0036
LYS 560.0040
PRO 570.0035
LYS 580.0032
ALA 590.0028
ALA 600.0024
GLU 610.0022
GLY 620.0020
LEU 630.0013
ASP 640.0013
THR 650.0018
GLN 660.0014
ARG 670.0006
PHE 680.0010
SER 690.0019
GLY 700.0027
LYS 710.0029
ARG 720.0031
LEU 730.0033
GLY 740.0034
ASP 750.0032
THR 760.0032
PHE 770.0028
VAL 780.0024
LEU 790.0020
THR 800.0017
LEU 810.0008
SER 820.0011
ASP 830.0020
PHE 840.0019
ARG 850.0024
ARG 860.0021
GLU 870.0015
ASN 880.0014
GLU 890.0019
GLY 900.0024
TYR 910.0021
TYR 920.0022
PHE 930.0026
CYS 940.0029
SER 950.0032
ALA 960.0029
LEU 970.0027
SER 980.0025
ASN 990.0023
SER 1000.0023
ILE 1010.0024
MET 1020.0024
TYR 1030.0025
PHE 1040.0026
SER 1050.0028
HIS 1060.0027
PHE 1070.0025
VAL 1080.0025
PRO 1090.0024
VAL 1100.0023
PHE 1110.0029
LEU 1120.0035
PRO 1130.0049
ALA 1140.0056
SER 10.0039
GLN 20.0039
PHE 30.0031
ARG 40.0027
VAL 50.0018
SER 60.0013
PRO 70.0008
LEU 80.0006
ASP 90.0004
ARG 100.0013
THR 110.0023
TRP 120.0031
ASN 130.0044
LEU 140.0052
GLY 150.0054
GLU 160.0043
THR 170.0036
VAL 180.0023
GLU 190.0019
LEU 200.0010
LYS 210.0015
CYS 220.0020
GLN 230.0029
VAL 240.0034
LEU 250.0042
LEU 260.0039
SER 270.0046
ASN 280.0045
PRO 290.0039
THR 300.0037
SER 310.0033
GLY 320.0026
CYS 330.0022
SER 340.0018
TRP 350.0013
LEU 360.0018
PHE 370.0019
GLN 380.0024
PRO 390.0027
ARG 400.0032
GLY 410.0023
ALA 420.0022
ALA 430.0022
ALA 440.0024
SER 450.0024
PRO 460.0025
THR 470.0021
PHE 480.0018
LEU 490.0012
LEU 500.0012
TYR 510.0017
LEU 520.0019
SER 530.0022
GLN 540.0023
ASN 550.0017
LYS 560.0016
PRO 570.0014
LYS 580.0013
ALA 590.0010
ALA 600.0013
GLU 610.0015
GLY 620.0022
LEU 630.0018
ASP 640.0025
THR 650.0021
GLN 660.0035
ARG 670.0031
PHE 680.0019
SER 690.0018
GLY 700.0018
LYS 710.0022
ARG 720.0029
LEU 730.0036
GLY 740.0042
ASP 750.0039
THR 760.0031
PHE 770.0023
VAL 780.0018
LEU 790.0010
THR 800.0017
LEU 810.0025
SER 820.0037
ASP 830.0045
PHE 840.0039
ARG 850.0046
ARG 860.0049
GLU 870.0045
ASN 880.0031
GLU 890.0031
GLY 900.0028
TYR 910.0020
TYR 920.0014
PHE 930.0017
CYS 940.0019
SER 950.0026
ALA 960.0027
LEU 970.0030
SER 980.0033
ASN 990.0036
SER 1000.0036
ILE 1010.0033
MET 1020.0030
TYR 1030.0028
PHE 1040.0026
SER 1050.0024
HIS 1060.0025
PHE 1070.0020
VAL 1080.0012
PRO 1090.0016
VAL 1100.0016
PHE 1110.0028
LEU 1120.0038
PRO 1130.0040
ALA 1140.0048

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.