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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0479
MET 10.0081
SER 20.0070
THR 30.0026
ILE 40.0039
THR 50.0046
LYS 60.0079
ASP 70.0053
GLN 80.0035
ILE 90.0069
LEU 100.0065
GLU 110.0041
GLY 120.0035
VAL 130.0056
ALA 140.0073
ALA 150.0075
LEU 160.0077
SER 170.0138
VAL 180.0164
MET 190.0142
GLU 200.0078
ILE 210.0082
VAL 220.0105
GLU 230.0057
LEU 240.0064
ILE 250.0111
SER 260.0062
ALA 270.0152
MET 280.0131
GLU 290.0058
GLU 300.0144
LYS 310.0207
PHE 320.0074
GLY 330.0149
VAL 340.0185
SER 350.0265
ALA 360.0412
ALA 370.0463
ALA 380.0339
VAL 390.0254
ALA 400.0353
ALA 410.0265
GLY 420.0270
PRO 430.0272
ALA 440.0274
ALA 450.0307
ALA 460.0437
VAL 470.0411
GLU 480.0236
ALA 490.0164
ALA 500.0196
GLU 510.0479
GLU 520.0385
GLN 530.0396
THR 540.0391
GLU 550.0407
PHE 560.0383
ASP 570.0370
VAL 580.0291
VAL 590.0303
LEU 600.0255
ALA 610.0332
SER 620.0298
PHE 630.0221
GLY 640.0265
GLU 650.0322
ASN 660.0250
LYS 670.0183
VAL 680.0150
ALA 690.0146
VAL 700.0051
ILE 710.0019
LYS 720.0124
ALA 730.0113
VAL 740.0141
ARG 750.0209
GLY 760.0259
ALA 770.0258
THR 780.0323
GLY 790.0370
LEU 800.0329
GLY 810.0285
LEU 820.0160
LYS 830.0176
GLU 840.0264
ALA 850.0175
LYS 860.0141
ASP 870.0227
LEU 880.0242
VAL 890.0197
GLU 900.0251
SER 910.0288
ALA 920.0283
PRO 930.0322
ALA 940.0300
VAL 950.0310
LEU 960.0295
LYS 970.0344
GLU 980.0419
GLY 990.0451
VAL 1000.0385
ASN 1010.0393
LYS 1020.0350
ASP 1030.0320
GLU 1040.0309
ALA 1050.0288
GLU 1060.0232
THR 1070.0213
LEU 1080.0190
LYS 1090.0152
LYS 1100.0079
SER 1110.0093
LEU 1120.0041
GLU 1130.0071
GLU 1140.0100
ALA 1150.0103
GLY 1160.0148
ALA 1170.0139
SER 1180.0205
VAL 1190.0209
GLU 1200.0293
ILE 1210.0314
LYS 1220.0337
GLU 1230.0355
ALA 1240.0363
ALA 1250.0382
ALA 1260.0169
LYS 1270.0144
ALA 1280.0107
TYR 1290.0069
LYS 1300.0060
ILE 1310.0044
ILE 1320.0043
SER 1330.0038
LEU 1340.0036
LYS 1350.0041
TYR 1360.0045
THR 1370.0051
ARG 1380.0058
LYS 1390.0065
VAL 1400.0072
CYS 1410.0056
ILE 1420.0038
GLY 1430.0053
PRO 1440.0069
GLY 1450.0100
PRO 1460.0173
GLY 1470.0181
LYS 1480.0145
ALA 1490.0102
TYR 1500.0076
LYS 1510.0035
ILE 1520.0033
ILE 1530.0033
SER 1540.0037
LEU 1550.0054
LYS 1560.0057
TYR 1570.0056
THR 1580.0039
ARG 1590.0037
LYS 1600.0033
VAL 1610.0051
CYS 1620.0089
GLY 1630.0155
PRO 1640.0198
GLY 1650.0234
PRO 1660.0387
GLY 1670.0322
GLY 1680.0263
LYS 1690.0153
ALA 1700.0107
TYR 1710.0084
LYS 1720.0040
ILE 1730.0051
ILE 1740.0062
SER 1750.0088
LEU 1760.0086
LYS 1770.0072
TYR 1780.0059
THR 1790.0048
ARG 1800.0038
LYS 1810.0056
VAL 1820.0064
GLY 1830.0068
PRO 1840.0076
GLY 1850.0064
PRO 1860.0053
GLY 1870.0037
ILE 1880.0039
ILE 1890.0042
SER 1900.0051
LEU 1910.0054
LYS 1920.0043
TYR 1930.0039
THR 1940.0032
ARG 1950.0032
LYS 1960.0029
VAL 1970.0035
CYS 1980.0045
ILE 1990.0054
GLN 2000.0064
LEU 2010.0075
GLY 2020.0069
GLY 2030.0063
PRO 2040.0052
GLY 2050.0049
PRO 2060.0049
GLY 2070.0036
ASN 2080.0031
ILE 2090.0036
LYS 2100.0025
THR 2110.0028
ALA 2120.0042
PHE 2130.0045
HIS 2140.0034
CYS 2150.0043
TYR 2160.0062
ALA 2170.0048
ALA 2180.0048
TYR 2190.0063
MET 2200.0060
THR 2210.0046
SER 2220.0059
ILE 2230.0052
LYS 2240.0049
ALA 2250.0039
CYS 2260.0047
ASP 2270.0058
LEU 2280.0038
LYS 2290.0054
LYS 2300.0037
PRO 2310.0041
LEU 2320.0036
MET 2330.0026
GLU 2340.0028
SER 2350.0022
GLY 2360.0008
TRP 2370.0004
SER 2380.0006
ASP 2390.0013
THR 2400.0018
ALA 2410.0019
HIS 2420.0010
GLY 2430.0011
LYS 2440.0010
LYS 2450.0017
SER 2460.0011
LEU 2470.0012
PRO 2480.0012
SER 2490.0012
SER 2500.0011
SER 2510.0013
SER 2520.0010
TYR 2530.0007
SER 2540.0009
TYR 2550.0011
ARG 2560.0010
ARG 2570.0007
LYS 2580.0006
LEU 2590.0005
THR 2600.0005
ASN 2610.0005
PRO 2620.0010
ALA 2630.0008
ASN 2640.0008
LYS 2650.0006
GLU 2660.0008
GLU 2670.0008
SER 2680.0009
ILE 2690.0008
LYS 2700.0011
LYS 2710.0015
GLN 2720.0014
LYS 2730.0007
TYR 2740.0005
SER 2750.0003
TYR 2760.0007
PRO 2770.0003
TRP 2780.0004
GLN 2790.0008
THR 2800.0008
SER 2810.0007
LYS 2820.0009
CYS 2830.0007
PHE 2840.0012
ASP 2880.0032
TYR 2890.0017
GLN 2900.0014
TYR 2910.0039
CYS 2970.0236
ASN 2980.0204
PRO 2990.0047
GLY 3000.0042
LYS 3010.0089
LYS 3020.0092
ASN 3030.0092
THR 3040.0094
ILE 3050.0081
SER 3060.0088
GLY 3070.0098
TYR 3080.0058
LYS 3090.0041
ARG 3100.0049
MET 3110.0068
MET 3120.0074
ALA 3130.0123
THR 3140.0150
LYS 3150.0119
ASP 3160.0178
SER 3170.0187
PHE 3180.0124
GLN 3190.0107
SER 3200.0061
PHE 3210.0057
ASN 3220.0051
LEU 3230.0026
THR 3240.0022
GLU 3250.0021
PRO 3260.0017
HIS 3270.0057
ILE 3280.0077
THR 3290.0104
THR 3300.0128
ASN 3310.0112
LYS 3320.0077
LEU 3330.0052
GLU 3340.0033
TRP 3350.0012
ILE 3360.0036
ASP 3370.0052
PRO 3380.0060
ASP 3390.0054
GLY 3400.0048
ASN 3410.0042
THR 3420.0057
ARG 3430.0053
GLY 3440.0064
GLY 3450.0059
GLY 3460.0051
GLY 10.0110
SER 20.0105
HIS 30.0097
SER 40.0093
MET 50.0085
ARG 60.0074
TYR 70.0068
PHE 80.0070
PHE 90.0066
THR 100.0066
SER 110.0060
VAL 120.0074
SER 130.0080
ARG 140.0089
PRO 150.0101
GLY 160.0118
ARG 170.0109
GLY 180.0094
GLU 190.0079
PRO 200.0073
ARG 210.0065
PHE 220.0061
ILE 230.0064
ALA 240.0060
VAL 250.0065
GLY 260.0073
TYR 270.0078
VAL 280.0083
ASP 290.0089
ASP 300.0086
THR 310.0089
GLN 320.0083
PHE 330.0079
VAL 340.0074
ARG 350.0073
PHE 360.0065
ASP 370.0068
SER 380.0062
ASP 390.0070
ALA 400.0072
ALA 410.0084
SER 420.0083
GLN 430.0074
ARG 440.0074
MET 450.0073
GLU 460.0076
PRO 470.0079
ARG 480.0083
ALA 490.0087
PRO 500.0087
TRP 510.0088
ILE 520.0084
GLU 530.0087
GLN 540.0087
GLU 550.0083
GLY 560.0089
PRO 570.0093
GLU 580.0091
TYR 590.0082
TRP 600.0082
ASP 610.0084
GLY 620.0079
GLU 630.0074
THR 640.0076
ARG 650.0077
LYS 660.0062
VAL 670.0059
LYS 680.0060
ALA 690.0058
HIS 700.0056
SER 710.0059
GLN 720.0055
THR 730.0050
HIS 740.0061
ARG 750.0074
VAL 760.0077
ASP 770.0069
LEU 780.0081
GLY 790.0092
THR 800.0085
LEU 810.0091
ARG 820.0100
GLY 830.0101
TYR 840.0086
TYR 850.0084
ASN 860.0094
GLN 870.0111
SER 880.0141
GLU 890.0179
ALA 900.0187
GLY 910.0090
SER 920.0081
HIS 930.0072
THR 940.0063
VAL 950.0056
GLN 960.0066
ARG 970.0069
MET 980.0071
TYR 990.0075
GLY 1000.0077
CYS 1010.0094
ASP 1020.0099
VAL 1030.0096
GLY 1040.0101
SER 1050.0101
ASP 1060.0099
TRP 1070.0097
ARG 1080.0097
PHE 1090.0099
LEU 1100.0107
ARG 1110.0095
GLY 1120.0092
TYR 1130.0089
HIS 1140.0086
GLN 1150.0083
TYR 1160.0063
ALA 1170.0062
TYR 1180.0064
ASP 1190.0066
GLY 1200.0064
LYS 1210.0058
ASP 1220.0056
TYR 1230.0064
ILE 1240.0067
ALA 1250.0065
LEU 1260.0081
LYS 1270.0075
GLU 1280.0078
ASP 1290.0082
LEU 1300.0088
ARG 1310.0084
SER 1320.0075
TRP 1330.0073
THR 1340.0062
ALA 1350.0065
ALA 1360.0049
ASP 1370.0058
MET 1380.0071
ALA 1390.0083
ALA 1400.0079
GLN 1410.0085
THR 1420.0102
THR 1430.0103
LYS 1440.0095
HIS 1450.0109
LYS 1460.0119
TRP 1470.0110
GLU 1480.0101
ALA 1490.0120
ALA 1500.0127
HIS 1510.0107
VAL 1520.0112
ALA 1530.0096
GLU 1540.0097
GLN 1550.0115
LEU 1560.0099
ARG 1570.0098
ALA 1580.0101
TYR 1590.0102
LEU 1600.0099
GLU 1610.0098
GLY 1620.0096
THR 1630.0095
CYS 1640.0097
VAL 1650.0097
GLU 1660.0093
TRP 1670.0091
LEU 1680.0093
ARG 1690.0093
ARG 1700.0090
TYR 1710.0090
LEU 1720.0095
GLU 1730.0092
ASN 1740.0090
GLY 1750.0095
LYS 1760.0097
GLU 1770.0098
THR 1780.0096
LEU 1790.0098
GLN 1800.0102
ARG 1810.0091
THR 1820.0084
ASP 1830.0072
ALA 1840.0066
PRO 1850.0060
LYS 1860.0077
THR 1870.0078
HIS 1880.0082
MET 1890.0082
THR 1900.0084
HIS 1910.0104
HIS 1920.0103
ALA 1930.0114
VAL 1940.0105
SER 1950.0120
ASP 1960.0133
HIS 1970.0121
GLU 1980.0105
ALA 1990.0102
THR 2000.0088
LEU 2010.0080
ARG 2020.0075
CYS 2030.0073
TRP 2040.0071
ALA 2050.0067
LEU 2060.0062
SER 2070.0066
PHE 2080.0070
TYR 2090.0077
PRO 2100.0081
ALA 2110.0074
GLU 2120.0070
ILE 2130.0062
THR 2140.0060
LEU 2150.0056
THR 2160.0053
TRP 2170.0061
GLN 2180.0068
ARG 2190.0074
ASP 2200.0086
GLY 2210.0078
GLU 2220.0054
ASP 2230.0037
GLN 2240.0023
THR 2250.0009
GLN 2260.0007
ASP 2270.0013
THR 2280.0021
GLU 2290.0031
LEU 2300.0034
VAL 2310.0058
GLU 2320.0051
THR 2330.0051
ARG 2340.0048
PRO 2350.0046
ALA 2360.0059
GLY 2370.0064
ASP 2380.0061
GLY 2390.0058
THR 2400.0060
PHE 2410.0056
GLN 2420.0057
LYS 2430.0058
TRP 2440.0059
ALA 2450.0060
ALA 2460.0055
VAL 2470.0062
VAL 2480.0069
VAL 2490.0080
PRO 2500.0091
SER 2510.0115
GLY 2520.0122
GLN 2530.0110
GLU 2540.0109
GLN 2550.0117
ARG 2560.0101
TYR 2570.0090
THR 2580.0090
CYS 2590.0080
HIS 2600.0077
VAL 2610.0064
GLN 2620.0071
HIS 2630.0070
GLU 2640.0076
GLY 2650.0067
LEU 2660.0076
PRO 2670.0080
LYS 2680.0087
PRO 2690.0090
LEU 2700.0084
THR 2710.0101
LEU 2720.0102
ARG 2730.0110
TRP 2740.0110
GLU 2750.0127
PRO 2760.0146
GLN 2780.0081
ARG 2790.0066
THR 2800.0057
PRO 2810.0044
LYS 2820.0050
ILE 2830.0044
GLN 2840.0053
VAL 2850.0067
TYR 2860.0078
SER 2870.0089
ARG 2880.0089
HIS 2890.0109
PRO 2900.0124
ALA 2910.0131
GLU 2920.0153
ASN 2930.0166
GLY 2940.0173
LYS 2950.0163
SER 2960.0149
ASN 2970.0130
PHE 2980.0102
LEU 2990.0089
ASN 3000.0068
CYS 3010.0052
TYR 3020.0039
VAL 3030.0037
SER 3040.0046
GLY 3050.0057
PHE 3060.0051
HIS 3070.0054
PRO 3080.0069
SER 3090.0046
ASP 3100.0042
ILE 3110.0033
GLU 3120.0043
VAL 3130.0033
ASP 3140.0046
LEU 3150.0064
LEU 3160.0075
LYS 3170.0104
ASN 3180.0111
GLY 3190.0084
GLU 3200.0089
ARG 3210.0082
ILE 3220.0101
GLU 3230.0105
LYS 3240.0106
VAL 3250.0080
GLU 3260.0070
HIS 3270.0048
SER 3280.0055
ASP 3290.0055
LEU 3300.0055
SER 3310.0057
PHE 3320.0060
SER 3330.0059
LYS 3340.0056
ASP 3350.0056
TRP 3360.0058
SER 3370.0061
PHE 3380.0047
TYR 3390.0040
LEU 3400.0030
LEU 3410.0035
TYR 3420.0037
TYR 3430.0078
THR 3440.0095
GLU 3450.0114
PHE 3460.0123
THR 3470.0140
PRO 3480.0142
THR 3490.0168
GLU 3500.0176
LYS 3510.0176
ASP 3520.0152
GLU 3530.0118
TYR 3540.0096
ALA 3550.0067
CYS 3560.0041
ARG 3570.0019
VAL 3580.0042
ASN 3590.0051
HIS 3600.0051
VAL 3610.0083
THR 3620.0082
LEU 3630.0079
SER 3640.0111
GLN 3650.0096
PRO 3660.0079
LYS 3670.0043
ILE 3680.0040
VAL 3690.0054
LYS 3700.0069
TRP 3710.0081
ASP 3720.0096
ARG 3730.0098
ASP 3740.0111
MET 3750.0099
SER 10.0029
GLN 20.0029
PHE 30.0028
ARG 40.0032
VAL 50.0025
SER 60.0028
PRO 70.0026
LEU 80.0029
ASP 90.0038
ARG 100.0026
THR 110.0016
TRP 120.0017
ASN 130.0028
LEU 140.0047
GLY 150.0057
GLU 160.0042
THR 170.0045
VAL 180.0033
GLU 190.0035
LEU 200.0024
LYS 210.0031
CYS 220.0028
GLN 230.0036
VAL 240.0034
LEU 250.0039
LEU 260.0024
SER 270.0035
ASN 280.0032
PRO 290.0022
THR 300.0022
SER 310.0025
GLY 320.0032
CYS 330.0027
SER 340.0030
TRP 350.0030
LEU 360.0031
PHE 370.0036
GLN 380.0043
PRO 390.0052
ARG 400.0059
GLY 410.0076
ALA 420.0066
ALA 430.0055
ALA 440.0059
SER 450.0050
PRO 460.0043
THR 470.0045
PHE 480.0043
LEU 490.0041
LEU 500.0043
TYR 510.0040
LEU 520.0042
SER 530.0043
GLN 540.0053
ASN 550.0061
LYS 560.0070
PRO 570.0060
LYS 580.0060
ALA 590.0060
ALA 600.0061
GLU 610.0075
GLY 620.0088
LEU 630.0079
ASP 640.0088
THR 650.0085
GLN 660.0094
ARG 670.0078
PHE 680.0066
SER 690.0065
GLY 700.0056
LYS 710.0055
ARG 720.0052
LEU 730.0057
GLY 740.0056
ASP 750.0045
THR 760.0043
PHE 770.0039
VAL 780.0041
LEU 790.0040
THR 800.0047
LEU 810.0051
SER 820.0063
ASP 830.0065
PHE 840.0051
ARG 850.0063
ARG 860.0059
GLU 870.0071
ASN 880.0054
GLU 890.0046
GLY 900.0048
TYR 910.0033
TYR 920.0024
PHE 930.0019
CYS 940.0020
SER 950.0024
ALA 960.0023
LEU 970.0021
SER 980.0019
ASN 990.0018
SER 1000.0020
ILE 1010.0031
MET 1020.0029
TYR 1030.0024
PHE 1040.0022
SER 1050.0022
HIS 1060.0021
PHE 1070.0022
VAL 1080.0019
PRO 1090.0027
VAL 1100.0024
PHE 1110.0032
LEU 1120.0031
PRO 1130.0029
ALA 1140.0048
SER 10.0059
GLN 20.0061
PHE 30.0067
ARG 40.0078
VAL 50.0076
SER 60.0091
PRO 70.0100
LEU 80.0094
ASP 90.0112
ARG 100.0110
THR 110.0100
TRP 120.0101
ASN 130.0104
LEU 140.0103
GLY 150.0119
GLU 160.0118
THR 170.0114
VAL 180.0097
GLU 190.0096
LEU 200.0080
LYS 210.0078
CYS 220.0071
GLN 230.0076
VAL 240.0068
LEU 250.0070
LEU 260.0060
SER 270.0067
ASN 280.0063
PRO 290.0057
THR 300.0054
SER 310.0043
GLY 320.0048
CYS 330.0044
SER 340.0041
TRP 350.0041
LEU 360.0043
PHE 370.0040
GLN 380.0037
PRO 390.0038
ARG 400.0045
GLY 410.0061
ALA 420.0056
ALA 430.0045
ALA 440.0043
SER 450.0033
PRO 460.0030
THR 470.0032
PHE 480.0034
LEU 490.0039
LEU 500.0044
TYR 510.0034
LEU 520.0031
SER 530.0028
GLN 540.0034
ASN 550.0033
LYS 560.0055
PRO 570.0049
LYS 580.0048
ALA 590.0050
ALA 600.0051
GLU 610.0074
GLY 620.0073
LEU 630.0069
ASP 640.0080
THR 650.0092
GLN 660.0109
ARG 670.0098
PHE 680.0083
SER 690.0081
GLY 700.0071
LYS 710.0071
ARG 720.0072
LEU 730.0083
GLY 740.0081
ASP 750.0069
THR 760.0071
PHE 770.0069
VAL 780.0077
LEU 790.0073
THR 800.0085
LEU 810.0094
SER 820.0108
ASP 830.0108
PHE 840.0092
ARG 850.0086
ARG 860.0070
GLU 870.0067
ASN 880.0065
GLU 890.0055
GLY 900.0047
TYR 910.0045
TYR 920.0048
PHE 930.0048
CYS 940.0051
SER 950.0046
ALA 960.0045
LEU 970.0045
SER 980.0048
ASN 990.0048
SER 1000.0042
ILE 1010.0044
MET 1020.0041
TYR 1030.0045
PHE 1040.0045
SER 1050.0053
HIS 1060.0055
PHE 1070.0054
VAL 1080.0064
PRO 1090.0063
VAL 1100.0066
PHE 1110.0070
LEU 1120.0083
PRO 1130.0100
ALA 1140.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.