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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 75  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0651
MET 10.0004
SER 20.0009
THR 30.0008
ILE 40.0004
THR 50.0012
LYS 60.0015
ASP 70.0008
GLN 80.0004
ILE 90.0013
LEU 100.0012
GLU 110.0010
GLY 120.0012
VAL 130.0017
ALA 140.0019
ALA 150.0022
LEU 160.0021
SER 170.0026
VAL 180.0028
MET 190.0024
GLU 200.0018
ILE 210.0016
VAL 220.0018
GLU 230.0015
LEU 240.0012
ILE 250.0015
SER 260.0013
ALA 270.0025
MET 280.0015
GLU 290.0016
GLU 300.0031
LYS 310.0037
PHE 320.0025
GLY 330.0040
VAL 340.0035
SER 350.0039
ALA 360.0058
ALA 370.0051
ALA 380.0043
VAL 390.0030
ALA 400.0029
ALA 410.0049
GLY 420.0072
PRO 430.0092
ALA 440.0145
ALA 450.0125
ALA 460.0144
VAL 470.0147
GLU 480.0202
ALA 490.0205
ALA 500.0181
GLU 510.0110
GLU 520.0099
GLN 530.0066
THR 540.0054
GLU 550.0026
PHE 560.0048
ASP 570.0053
VAL 580.0060
VAL 590.0066
LEU 600.0074
ALA 610.0073
SER 620.0071
PHE 630.0071
GLY 640.0072
GLU 650.0075
ASN 660.0080
LYS 670.0085
VAL 680.0092
ALA 690.0085
VAL 700.0082
ILE 710.0091
LYS 720.0094
ALA 730.0082
VAL 740.0089
ARG 750.0105
GLY 760.0088
ALA 770.0079
THR 780.0100
GLY 790.0115
LEU 800.0128
GLY 810.0157
LEU 820.0146
LYS 830.0153
GLU 840.0142
ALA 850.0114
LYS 860.0096
ASP 870.0097
LEU 880.0093
VAL 890.0070
GLU 900.0061
SER 910.0063
ALA 920.0058
PRO 930.0062
ALA 940.0073
VAL 950.0083
LEU 960.0074
LYS 970.0063
GLU 980.0055
GLY 990.0046
VAL 1000.0050
ASN 1010.0053
LYS 1020.0066
ASP 1030.0076
GLU 1040.0071
ALA 1050.0072
GLU 1060.0082
THR 1070.0081
LEU 1080.0077
LYS 1090.0080
LYS 1100.0084
SER 1110.0079
LEU 1120.0078
GLU 1130.0082
GLU 1140.0083
ALA 1150.0081
GLY 1160.0082
ALA 1170.0078
SER 1180.0078
VAL 1190.0074
GLU 1200.0073
ILE 1210.0064
LYS 1220.0047
GLU 1230.0030
ALA 1240.0011
ALA 1250.0027
ALA 1260.0067
LYS 1270.0070
ALA 1280.0068
TYR 1290.0063
LYS 1300.0064
ILE 1310.0072
ILE 1320.0072
SER 1330.0062
LEU 1340.0061
LYS 1350.0052
TYR 1360.0028
THR 1370.0013
ARG 1380.0022
LYS 1390.0043
VAL 1400.0057
CYS 1410.0065
ILE 1420.0046
GLY 1430.0062
PRO 1440.0057
GLY 1450.0074
PRO 1460.0144
GLY 1470.0160
LYS 1480.0122
ALA 1490.0094
TYR 1500.0043
LYS 1510.0023
ILE 1520.0026
ILE 1530.0016
SER 1540.0019
LEU 1550.0012
LYS 1560.0026
TYR 1570.0035
THR 1580.0042
ARG 1590.0052
LYS 1600.0059
VAL 1610.0070
CYS 1620.0071
GLY 1630.0093
PRO 1640.0109
GLY 1650.0102
PRO 1660.0129
GLY 1670.0174
GLY 1680.0178
LYS 1690.0161
ALA 1700.0129
TYR 1710.0099
LYS 1720.0082
ILE 1730.0066
ILE 1740.0054
SER 1750.0047
LEU 1760.0041
LYS 1770.0046
TYR 1780.0044
THR 1790.0048
ARG 1800.0046
LYS 1810.0055
VAL 1820.0065
GLY 1830.0080
PRO 1840.0088
GLY 1850.0086
PRO 1860.0067
GLY 1870.0047
ILE 1880.0045
ILE 1890.0031
SER 1900.0036
LEU 1910.0016
LYS 1920.0008
TYR 1930.0024
THR 1940.0038
ARG 1950.0055
LYS 1960.0071
VAL 1970.0073
CYS 1980.0070
ILE 1990.0074
GLN 2000.0072
LEU 2010.0080
GLY 2020.0077
GLY 2030.0074
PRO 2040.0068
GLY 2050.0063
PRO 2060.0045
GLY 2070.0037
ASN 2080.0051
ILE 2090.0063
LYS 2100.0052
THR 2110.0057
ALA 2120.0058
PHE 2130.0069
HIS 2140.0073
CYS 2150.0068
TYR 2160.0084
ALA 2170.0078
ALA 2180.0078
TYR 2190.0080
MET 2200.0076
THR 2210.0091
SER 2220.0096
ILE 2230.0095
LYS 2240.0093
ALA 2250.0093
CYS 2260.0048
ASP 2270.0074
LEU 2280.0069
LYS 2290.0101
LYS 2300.0107
PRO 2310.0221
LEU 2320.0130
MET 2330.0142
GLU 2340.0111
SER 2350.0045
GLY 2360.0044
TRP 2370.0079
SER 2380.0163
ASP 2390.0223
THR 2400.0298
ALA 2410.0344
HIS 2420.0195
GLY 2430.0214
LYS 2440.0175
LYS 2450.0312
SER 2460.0217
LEU 2470.0205
PRO 2480.0162
SER 2490.0164
SER 2500.0150
SER 2510.0184
SER 2520.0123
TYR 2530.0088
SER 2540.0043
TYR 2550.0081
ARG 2560.0095
ARG 2570.0067
LYS 2580.0041
LEU 2590.0038
THR 2600.0061
ASN 2610.0087
PRO 2620.0129
ALA 2630.0147
ASN 2640.0100
LYS 2650.0083
GLU 2660.0078
GLU 2670.0101
SER 2680.0105
ILE 2690.0107
LYS 2700.0151
LYS 2710.0104
GLN 2720.0076
LYS 2730.0051
TYR 2740.0050
SER 2750.0077
TYR 2760.0060
PRO 2770.0088
TRP 2780.0119
GLN 2790.0110
THR 2800.0069
SER 2810.0074
LYS 2820.0049
CYS 2830.0061
PHE 2840.0075
ASP 2880.0008
TYR 2890.0004
GLN 2900.0007
TYR 2910.0009
CYS 2970.0289
ASN 2980.0135
PRO 2990.0130
GLY 3000.0085
LYS 3010.0139
LYS 3020.0145
ASN 3030.0130
THR 3040.0115
ILE 3050.0106
SER 3060.0135
GLY 3070.0132
TYR 3080.0154
LYS 3090.0113
ARG 3100.0069
MET 3110.0106
MET 3120.0138
ALA 3130.0115
THR 3140.0122
LYS 3150.0156
ASP 3160.0198
SER 3170.0164
PHE 3180.0166
GLN 3190.0176
SER 3200.0176
PHE 3210.0186
ASN 3220.0188
LEU 3230.0193
THR 3240.0312
GLU 3250.0367
PRO 3260.0291
HIS 3270.0416
ILE 3280.0456
THR 3290.0546
THR 3300.0651
ASN 3310.0558
LYS 3320.0389
LEU 3330.0271
GLU 3340.0211
TRP 3350.0205
ILE 3360.0286
ASP 3370.0245
PRO 3380.0299
ASP 3390.0310
GLY 3400.0250
ASN 3410.0269
THR 3420.0216
ARG 3430.0276
GLY 3440.0257
GLY 3450.0348
GLY 3460.0238
GLY 10.0138
SER 20.0138
HIS 30.0112
SER 40.0105
MET 50.0080
ARG 60.0073
TYR 70.0062
PHE 80.0069
PHE 90.0061
THR 100.0068
SER 110.0067
VAL 120.0079
SER 130.0084
ARG 140.0086
PRO 150.0095
GLY 160.0099
ARG 170.0085
GLY 180.0066
GLU 190.0061
PRO 200.0072
ARG 210.0067
PHE 220.0055
ILE 230.0058
ALA 240.0047
VAL 250.0051
GLY 260.0049
TYR 270.0067
VAL 280.0070
ASP 290.0097
ASP 300.0106
THR 310.0090
GLN 320.0074
PHE 330.0049
VAL 340.0036
ARG 350.0041
PHE 360.0036
ASP 370.0056
SER 380.0043
ASP 390.0075
ALA 400.0086
ALA 410.0116
SER 420.0107
GLN 430.0074
ARG 440.0066
MET 450.0042
GLU 460.0056
PRO 470.0057
ARG 480.0074
ALA 490.0075
PRO 500.0084
TRP 510.0054
ILE 520.0041
GLU 530.0081
GLN 540.0086
GLU 550.0078
GLY 560.0127
PRO 570.0142
GLU 580.0146
TYR 590.0101
TRP 600.0088
ASP 610.0108
GLY 620.0100
GLU 630.0059
THR 640.0058
ARG 650.0077
LYS 660.0056
VAL 670.0020
LYS 680.0018
ALA 690.0045
HIS 700.0048
SER 710.0038
GLN 720.0046
THR 730.0065
HIS 740.0069
ARG 750.0070
VAL 760.0085
ASP 770.0087
LEU 780.0090
GLY 790.0097
THR 800.0100
LEU 810.0090
ARG 820.0095
GLY 830.0098
TYR 840.0091
TYR 850.0088
ASN 860.0088
GLN 870.0084
SER 880.0082
GLU 890.0076
ALA 900.0077
GLY 910.0095
SER 920.0088
HIS 930.0086
THR 940.0080
VAL 950.0077
GLN 960.0073
ARG 970.0071
MET 980.0075
TYR 990.0077
GLY 1000.0079
CYS 1010.0107
ASP 1020.0126
VAL 1030.0138
GLY 1040.0161
SER 1050.0163
ASP 1060.0174
TRP 1070.0139
ARG 1080.0156
PHE 1090.0146
LEU 1100.0163
ARG 1110.0120
GLY 1120.0104
TYR 1130.0093
HIS 1140.0078
GLN 1150.0078
TYR 1160.0071
ALA 1170.0074
TYR 1180.0080
ASP 1190.0081
GLY 1200.0073
LYS 1210.0076
ASP 1220.0076
TYR 1230.0078
ILE 1240.0078
ALA 1250.0076
LEU 1260.0096
LYS 1270.0100
GLU 1280.0108
ASP 1290.0105
LEU 1300.0101
ARG 1310.0093
SER 1320.0088
TRP 1330.0086
THR 1340.0090
ALA 1350.0086
ALA 1360.0073
ASP 1370.0075
MET 1380.0080
ALA 1390.0084
ALA 1400.0082
GLN 1410.0087
THR 1420.0090
THR 1430.0090
LYS 1440.0087
HIS 1450.0091
LYS 1460.0095
TRP 1470.0091
GLU 1480.0090
ALA 1490.0095
ALA 1500.0097
HIS 1510.0092
VAL 1520.0092
ALA 1530.0092
GLU 1540.0094
GLN 1550.0097
LEU 1560.0086
ARG 1570.0099
ALA 1580.0101
TYR 1590.0094
LEU 1600.0099
GLU 1610.0125
GLY 1620.0120
THR 1630.0099
CYS 1640.0091
VAL 1650.0108
GLU 1660.0107
TRP 1670.0074
LEU 1680.0076
ARG 1690.0086
ARG 1700.0064
TYR 1710.0039
LEU 1720.0060
GLU 1730.0045
ASN 1740.0019
GLY 1750.0037
LYS 1760.0056
GLU 1770.0077
THR 1780.0088
LEU 1790.0087
GLN 1800.0096
ARG 1810.0135
THR 1820.0124
ASP 1830.0114
ALA 1840.0109
PRO 1850.0094
LYS 1860.0088
THR 1870.0070
HIS 1880.0071
MET 1890.0070
THR 1900.0081
HIS 1910.0105
HIS 1920.0124
ALA 1930.0157
VAL 1940.0164
SER 1950.0201
ASP 1960.0217
HIS 1970.0189
GLU 1980.0157
ALA 1990.0134
THR 2000.0105
LEU 2010.0083
ARG 2020.0064
CYS 2030.0050
TRP 2040.0047
ALA 2050.0055
LEU 2060.0072
SER 2070.0088
PHE 2080.0092
TYR 2090.0104
PRO 2100.0106
ALA 2110.0092
GLU 2120.0094
ILE 2130.0073
THR 2140.0064
LEU 2150.0046
THR 2160.0062
TRP 2170.0062
GLN 2180.0066
ARG 2190.0076
ASP 2200.0070
GLY 2210.0073
GLU 2220.0087
ASP 2230.0089
GLN 2240.0099
THR 2250.0108
GLN 2260.0108
ASP 2270.0101
THR 2280.0091
GLU 2290.0088
LEU 2300.0081
VAL 2310.0054
GLU 2320.0067
THR 2330.0068
ARG 2340.0065
PRO 2350.0081
ALA 2360.0088
GLY 2370.0106
ASP 2380.0113
GLY 2390.0115
THR 2400.0096
PHE 2410.0084
GLN 2420.0060
LYS 2430.0049
TRP 2440.0039
ALA 2450.0052
ALA 2460.0075
VAL 2470.0088
VAL 2480.0110
VAL 2490.0110
PRO 2500.0131
SER 2510.0160
GLY 2520.0157
GLN 2530.0133
GLU 2540.0113
GLN 2550.0107
ARG 2560.0087
TYR 2570.0075
THR 2580.0056
CYS 2590.0049
HIS 2600.0051
VAL 2610.0051
GLN 2620.0072
HIS 2630.0092
GLU 2640.0121
GLY 2650.0124
LEU 2660.0129
PRO 2670.0157
LYS 2680.0133
PRO 2690.0097
LEU 2700.0083
THR 2710.0065
LEU 2720.0069
ARG 2730.0078
TRP 2740.0093
GLU 2750.0113
PRO 2760.0121
GLN 2780.0073
ARG 2790.0065
THR 2800.0069
PRO 2810.0065
LYS 2820.0070
ILE 2830.0075
GLN 2840.0069
VAL 2850.0068
TYR 2860.0066
SER 2870.0075
ARG 2880.0090
HIS 2890.0086
PRO 2900.0077
ALA 2910.0080
GLU 2920.0088
ASN 2930.0087
GLY 2940.0100
LYS 2950.0103
SER 2960.0107
ASN 2970.0099
PHE 2980.0090
LEU 2990.0082
ASN 3000.0082
CYS 3010.0082
TYR 3020.0084
VAL 3030.0072
SER 3040.0071
GLY 3050.0071
PHE 3060.0068
HIS 3070.0065
PRO 3080.0073
SER 3090.0067
ASP 3100.0071
ILE 3110.0076
GLU 3120.0080
VAL 3130.0099
ASP 3140.0098
LEU 3150.0093
LEU 3160.0093
LYS 3170.0091
ASN 3180.0095
GLY 3190.0103
GLU 3200.0110
ARG 3210.0112
ILE 3220.0108
GLU 3230.0125
LYS 3240.0124
VAL 3250.0108
GLU 3260.0105
HIS 3270.0096
SER 3280.0076
ASP 3290.0067
LEU 3300.0074
SER 3310.0071
PHE 3320.0079
SER 3330.0018
LYS 3340.0025
ASP 3350.0032
TRP 3360.0049
SER 3370.0054
PHE 3380.0077
TYR 3390.0077
LEU 3400.0077
LEU 3410.0077
TYR 3420.0082
TYR 3430.0096
THR 3440.0100
GLU 3450.0100
PHE 3460.0093
THR 3470.0089
PRO 3480.0085
THR 3490.0083
GLU 3500.0077
LYS 3510.0078
ASP 3520.0083
GLU 3530.0079
TYR 3540.0082
ALA 3550.0084
CYS 3560.0088
ARG 3570.0092
VAL 3580.0083
ASN 3590.0075
HIS 3600.0074
VAL 3610.0072
THR 3620.0083
LEU 3630.0083
SER 3640.0075
GLN 3650.0061
PRO 3660.0063
LYS 3670.0084
ILE 3680.0090
VAL 3690.0081
LYS 3700.0075
TRP 3710.0071
ASP 3720.0063
ARG 3730.0051
ASP 3740.0037
MET 3750.0043
SER 10.0060
GLN 20.0072
PHE 30.0083
ARG 40.0089
VAL 50.0098
SER 60.0136
PRO 70.0140
LEU 80.0142
ASP 90.0157
ARG 100.0151
THR 110.0170
TRP 120.0173
ASN 130.0190
LEU 140.0195
GLY 150.0207
GLU 160.0176
THR 170.0149
VAL 180.0136
GLU 190.0138
LEU 200.0134
LYS 210.0117
CYS 220.0100
GLN 230.0102
VAL 240.0093
LEU 250.0092
LEU 260.0085
SER 270.0083
ASN 280.0085
PRO 290.0091
THR 300.0094
SER 310.0121
GLY 320.0119
CYS 330.0107
SER 340.0089
TRP 350.0084
LEU 360.0082
PHE 370.0077
GLN 380.0068
PRO 390.0072
ARG 400.0076
GLY 410.0078
ALA 420.0061
ALA 430.0040
ALA 440.0051
SER 450.0048
PRO 460.0059
THR 470.0059
PHE 480.0071
LEU 490.0078
LEU 500.0092
TYR 510.0102
LEU 520.0109
SER 530.0114
GLN 540.0122
ASN 550.0121
LYS 560.0147
PRO 570.0126
LYS 580.0106
ALA 590.0085
ALA 600.0063
GLU 610.0031
GLY 620.0017
LEU 630.0035
ASP 640.0059
THR 650.0075
GLN 660.0089
ARG 670.0105
PHE 680.0089
SER 690.0108
GLY 700.0128
LYS 710.0129
ARG 720.0135
LEU 730.0154
GLY 740.0155
ASP 750.0135
THR 760.0144
PHE 770.0126
VAL 780.0124
LEU 790.0107
THR 800.0114
LEU 810.0120
SER 820.0146
ASP 830.0165
PHE 840.0156
ARG 850.0157
ARG 860.0151
GLU 870.0131
ASN 880.0120
GLU 890.0119
GLY 900.0102
TYR 910.0087
TYR 920.0092
PHE 930.0093
CYS 940.0100
SER 950.0097
ALA 960.0105
LEU 970.0106
SER 980.0107
ASN 990.0107
SER 1000.0104
ILE 1010.0101
MET 1020.0094
TYR 1030.0095
PHE 1040.0089
SER 1050.0097
HIS 1060.0093
PHE 1070.0089
VAL 1080.0104
PRO 1090.0104
VAL 1100.0116
PHE 1110.0136
LEU 1120.0157
PRO 1130.0159
ALA 1140.0132
SER 10.0085
GLN 20.0100
PHE 30.0083
ARG 40.0071
VAL 50.0055
SER 60.0059
PRO 70.0062
LEU 80.0038
ASP 90.0070
ARG 100.0085
THR 110.0094
TRP 120.0100
ASN 130.0120
LEU 140.0115
GLY 150.0121
GLU 160.0118
THR 170.0107
VAL 180.0079
GLU 190.0085
LEU 200.0065
LYS 210.0078
CYS 220.0081
GLN 230.0100
VAL 240.0113
LEU 250.0119
LEU 260.0124
SER 270.0142
ASN 280.0151
PRO 290.0138
THR 300.0144
SER 310.0139
GLY 320.0126
CYS 330.0107
SER 340.0096
TRP 350.0077
LEU 360.0066
PHE 370.0046
GLN 380.0050
PRO 390.0047
ARG 400.0061
GLY 410.0063
ALA 420.0077
ALA 430.0085
ALA 440.0071
SER 450.0075
PRO 460.0078
THR 470.0077
PHE 480.0085
LEU 490.0077
LEU 500.0090
TYR 510.0113
LEU 520.0115
SER 530.0114
GLN 540.0111
ASN 550.0105
LYS 560.0115
PRO 570.0113
LYS 580.0112
ALA 590.0108
ALA 600.0107
GLU 610.0096
GLY 620.0073
LEU 630.0069
ASP 640.0066
THR 650.0088
GLN 660.0101
ARG 670.0080
PHE 680.0071
SER 690.0091
GLY 700.0093
LYS 710.0112
ARG 720.0127
LEU 730.0136
GLY 740.0149
ASP 750.0132
THR 760.0112
PHE 770.0105
VAL 780.0093
LEU 790.0076
THR 800.0079
LEU 810.0075
SER 820.0094
ASP 830.0091
PHE 840.0071
ARG 850.0062
ARG 860.0070
GLU 870.0042
ASN 880.0021
GLU 890.0038
GLY 900.0032
TYR 910.0022
TYR 920.0027
PHE 930.0047
CYS 940.0070
SER 950.0092
ALA 960.0102
LEU 970.0110
SER 980.0117
ASN 990.0125
SER 1000.0122
ILE 1010.0101
MET 1020.0092
TYR 1030.0081
PHE 1040.0071
SER 1050.0062
HIS 1060.0041
PHE 1070.0025
VAL 1080.0011
PRO 1090.0021
VAL 1100.0033
PHE 1110.0064
LEU 1120.0100
PRO 1130.0131
ALA 1140.0149

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.