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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0511
MET 10.0002
SER 20.0005
THR 30.0005
ILE 40.0003
THR 50.0008
LYS 60.0009
ASP 70.0005
GLN 80.0004
ILE 90.0008
LEU 100.0007
GLU 110.0007
GLY 120.0009
VAL 130.0011
ALA 140.0013
ALA 150.0015
LEU 160.0014
SER 170.0018
VAL 180.0018
MET 190.0016
GLU 200.0013
ILE 210.0010
VAL 220.0012
GLU 230.0010
LEU 240.0008
ILE 250.0009
SER 260.0010
ALA 270.0017
MET 280.0009
GLU 290.0012
GLU 300.0022
LYS 310.0024
PHE 320.0015
GLY 330.0028
VAL 340.0026
SER 350.0028
ALA 360.0041
ALA 370.0037
ALA 380.0031
VAL 390.0022
ALA 400.0021
ALA 410.0029
GLY 420.0040
PRO 430.0045
ALA 440.0081
ALA 450.0074
ALA 460.0086
VAL 470.0074
GLU 480.0121
ALA 490.0134
ALA 500.0111
GLU 510.0071
GLU 520.0061
GLN 530.0031
THR 540.0030
GLU 550.0032
PHE 560.0047
ASP 570.0051
VAL 580.0055
VAL 590.0061
LEU 600.0067
ALA 610.0078
SER 620.0065
PHE 630.0052
GLY 640.0034
GLU 650.0034
ASN 660.0049
LYS 670.0068
VAL 680.0088
ALA 690.0069
VAL 700.0052
ILE 710.0083
LYS 720.0092
ALA 730.0057
VAL 740.0062
ARG 750.0096
GLY 760.0079
ALA 770.0044
THR 780.0075
GLY 790.0104
LEU 800.0133
GLY 810.0177
LEU 820.0170
LYS 830.0190
GLU 840.0172
ALA 850.0120
LYS 860.0110
ASP 870.0131
LEU 880.0113
VAL 890.0080
GLU 900.0096
SER 910.0103
ALA 920.0094
PRO 930.0095
ALA 940.0094
VAL 950.0089
LEU 960.0066
LYS 970.0056
GLU 980.0051
GLY 990.0044
VAL 1000.0042
ASN 1010.0045
LYS 1020.0045
ASP 1030.0042
GLU 1040.0042
ALA 1050.0044
GLU 1060.0042
THR 1070.0028
LEU 1080.0029
LYS 1090.0034
LYS 1100.0028
SER 1110.0024
LEU 1120.0021
GLU 1130.0026
GLU 1140.0036
ALA 1150.0032
GLY 1160.0023
ALA 1170.0029
SER 1180.0040
VAL 1190.0048
GLU 1200.0065
ILE 1210.0065
LYS 1220.0045
GLU 1230.0024
ALA 1240.0036
ALA 1250.0034
ALA 1260.0106
LYS 1270.0117
ALA 1280.0112
TYR 1290.0133
LYS 1300.0132
ILE 1310.0154
ILE 1320.0153
SER 1330.0141
LEU 1340.0131
LYS 1350.0124
TYR 1360.0070
THR 1370.0047
ARG 1380.0054
LYS 1390.0062
VAL 1400.0077
CYS 1410.0064
ILE 1420.0092
GLY 1430.0122
PRO 1440.0165
GLY 1450.0216
PRO 1460.0196
GLY 1470.0122
LYS 1480.0134
ALA 1490.0132
TYR 1500.0129
LYS 1510.0082
ILE 1520.0075
ILE 1530.0048
SER 1540.0067
LEU 1550.0066
LYS 1560.0069
TYR 1570.0063
THR 1580.0082
ARG 1590.0076
LYS 1600.0112
VAL 1610.0097
CYS 1620.0144
GLY 1630.0170
PRO 1640.0154
GLY 1650.0183
PRO 1660.0230
GLY 1670.0132
GLY 1680.0136
LYS 1690.0085
ALA 1700.0085
TYR 1710.0122
LYS 1720.0108
ILE 1730.0144
ILE 1740.0137
SER 1750.0169
LEU 1760.0131
LYS 1770.0112
TYR 1780.0069
THR 1790.0069
ARG 1800.0058
LYS 1810.0131
VAL 1820.0150
GLY 1830.0181
PRO 1840.0176
GLY 1850.0136
PRO 1860.0079
GLY 1870.0067
ILE 1880.0065
ILE 1890.0056
SER 1900.0054
LEU 1910.0031
LYS 1920.0032
TYR 1930.0042
THR 1940.0070
ARG 1950.0081
LYS 1960.0128
VAL 1970.0122
CYS 1980.0124
ILE 1990.0133
GLN 2000.0129
LEU 2010.0123
GLY 2020.0127
GLY 2030.0108
PRO 2040.0088
GLY 2050.0098
PRO 2060.0093
GLY 2070.0095
ASN 2080.0094
ILE 2090.0082
LYS 2100.0077
THR 2110.0078
ALA 2120.0078
PHE 2130.0072
HIS 2140.0065
CYS 2150.0065
TYR 2160.0074
ALA 2170.0064
ALA 2180.0047
TYR 2190.0050
MET 2200.0048
THR 2210.0051
SER 2220.0046
ILE 2230.0060
LYS 2240.0068
ALA 2250.0096
CYS 2260.0199
ASP 2270.0152
LEU 2280.0061
LYS 2290.0050
LYS 2300.0100
PRO 2310.0102
LEU 2320.0033
MET 2330.0025
GLU 2340.0054
SER 2350.0088
GLY 2360.0022
TRP 2370.0020
SER 2380.0017
ASP 2390.0018
THR 2400.0011
ALA 2410.0097
HIS 2420.0060
GLY 2430.0045
LYS 2440.0013
LYS 2450.0007
SER 2460.0023
LEU 2470.0015
PRO 2480.0017
SER 2490.0023
SER 2500.0021
SER 2510.0013
SER 2520.0016
TYR 2530.0019
SER 2540.0028
TYR 2550.0038
ARG 2560.0035
ARG 2570.0032
LYS 2580.0030
LEU 2590.0026
THR 2600.0025
ASN 2610.0017
PRO 2620.0012
ALA 2630.0013
ASN 2640.0019
LYS 2650.0022
GLU 2660.0026
GLU 2670.0020
SER 2680.0016
ILE 2690.0020
LYS 2700.0019
LYS 2710.0033
GLN 2720.0040
LYS 2730.0023
TYR 2740.0029
SER 2750.0016
TYR 2760.0019
PRO 2770.0026
TRP 2780.0031
GLN 2790.0034
THR 2800.0022
SER 2810.0028
LYS 2820.0018
CYS 2830.0022
PHE 2840.0034
ASP 2880.0027
TYR 2890.0014
GLN 2900.0010
TYR 2910.0029
CYS 2970.0277
ASN 2980.0200
PRO 2990.0201
GLY 3000.0207
LYS 3010.0158
LYS 3020.0218
ASN 3030.0199
THR 3040.0246
ILE 3050.0202
SER 3060.0245
GLY 3070.0293
TYR 3080.0221
LYS 3090.0135
ARG 3100.0142
MET 3110.0161
MET 3120.0151
ALA 3130.0230
THR 3140.0329
LYS 3150.0300
ASP 3160.0487
SER 3170.0511
PHE 3180.0340
GLN 3190.0299
SER 3200.0151
PHE 3210.0054
ASN 3220.0100
LEU 3230.0118
THR 3240.0114
GLU 3250.0143
PRO 3260.0162
HIS 3270.0252
ILE 3280.0285
THR 3290.0332
THR 3300.0371
ASN 3310.0360
LYS 3320.0315
LEU 3330.0261
GLU 3340.0223
TRP 3350.0168
ILE 3360.0122
ASP 3370.0063
PRO 3380.0092
ASP 3390.0103
GLY 3400.0076
ASN 3410.0098
THR 3420.0070
ARG 3430.0077
GLY 3440.0085
GLY 3450.0104
GLY 3460.0112
GLY 10.0095
SER 20.0090
HIS 30.0084
SER 40.0079
MET 50.0075
ARG 60.0062
TYR 70.0054
PHE 80.0056
PHE 90.0057
THR 100.0073
SER 110.0078
VAL 120.0103
SER 130.0121
ARG 140.0144
PRO 150.0168
GLY 160.0224
ARG 170.0194
GLY 180.0156
GLU 190.0126
PRO 200.0115
ARG 210.0102
PHE 220.0080
ILE 230.0081
ALA 240.0065
VAL 250.0078
GLY 260.0075
TYR 270.0073
VAL 280.0069
ASP 290.0063
ASP 300.0083
THR 310.0105
GLN 320.0101
PHE 330.0103
VAL 340.0096
ARG 350.0094
PHE 360.0083
ASP 370.0094
SER 380.0082
ASP 390.0111
ALA 400.0115
ALA 410.0126
SER 420.0121
GLN 430.0086
ARG 440.0093
MET 450.0095
GLU 460.0112
PRO 470.0130
ARG 480.0140
ALA 490.0155
PRO 500.0180
TRP 510.0171
ILE 520.0151
GLU 530.0177
GLN 540.0193
GLU 550.0169
GLY 560.0190
PRO 570.0176
GLU 580.0162
TYR 590.0138
TRP 600.0127
ASP 610.0119
GLY 620.0110
GLU 630.0089
THR 640.0080
ARG 650.0071
LYS 660.0062
VAL 670.0050
LYS 680.0044
ALA 690.0050
HIS 700.0047
SER 710.0059
GLN 720.0077
THR 730.0085
HIS 740.0080
ARG 750.0100
VAL 760.0122
ASP 770.0107
LEU 780.0118
GLY 790.0142
THR 800.0136
LEU 810.0116
ARG 820.0136
GLY 830.0146
TYR 840.0126
TYR 850.0130
ASN 860.0138
GLN 870.0138
SER 880.0143
GLU 890.0141
ALA 900.0144
GLY 910.0150
SER 920.0129
HIS 930.0111
THR 940.0093
VAL 950.0074
GLN 960.0064
ARG 970.0049
MET 980.0044
TYR 990.0050
GLY 1000.0066
CYS 1010.0085
ASP 1020.0093
VAL 1030.0104
GLY 1040.0113
SER 1050.0121
ASP 1060.0136
TRP 1070.0121
ARG 1080.0125
PHE 1090.0119
LEU 1100.0121
ARG 1110.0102
GLY 1120.0081
TYR 1130.0061
HIS 1140.0051
GLN 1150.0044
TYR 1160.0053
ALA 1170.0061
TYR 1180.0080
ASP 1190.0095
GLY 1200.0084
LYS 1210.0079
ASP 1220.0055
TYR 1230.0059
ILE 1240.0055
ALA 1250.0054
LEU 1260.0080
LYS 1270.0101
GLU 1280.0120
ASP 1290.0150
LEU 1300.0128
ARG 1310.0173
SER 1320.0148
TRP 1330.0108
THR 1340.0076
ALA 1350.0068
ALA 1360.0055
ASP 1370.0063
MET 1380.0083
ALA 1390.0100
ALA 1400.0084
GLN 1410.0108
THR 1420.0145
THR 1430.0132
LYS 1440.0129
HIS 1450.0173
LYS 1460.0196
TRP 1470.0175
GLU 1480.0205
ALA 1490.0246
ALA 1500.0235
HIS 1510.0228
VAL 1520.0174
ALA 1530.0162
GLU 1540.0198
GLN 1550.0169
LEU 1560.0121
ARG 1570.0144
ALA 1580.0150
TYR 1590.0108
LEU 1600.0105
GLU 1610.0128
GLY 1620.0123
THR 1630.0099
CYS 1640.0089
VAL 1650.0111
GLU 1660.0110
TRP 1670.0105
LEU 1680.0104
ARG 1690.0118
ARG 1700.0122
TYR 1710.0110
LEU 1720.0109
GLU 1730.0124
ASN 1740.0132
GLY 1750.0129
LYS 1760.0109
GLU 1770.0123
THR 1780.0118
LEU 1790.0089
GLN 1800.0076
ARG 1810.0078
THR 1820.0080
ASP 1830.0089
ALA 1840.0092
PRO 1850.0097
LYS 1860.0090
THR 1870.0080
HIS 1880.0072
MET 1890.0060
THR 1900.0049
HIS 1910.0030
HIS 1920.0021
ALA 1930.0038
VAL 1940.0073
SER 1950.0098
ASP 1960.0107
HIS 1970.0110
GLU 1980.0085
ALA 1990.0048
THR 2000.0024
LEU 2010.0027
ARG 2020.0031
CYS 2030.0046
TRP 2040.0054
ALA 2050.0067
LEU 2060.0067
SER 2070.0072
PHE 2080.0074
TYR 2090.0076
PRO 2100.0076
ALA 2110.0062
GLU 2120.0063
ILE 2130.0060
THR 2140.0057
LEU 2150.0051
THR 2160.0033
TRP 2170.0039
GLN 2180.0061
ARG 2190.0078
ASP 2200.0100
GLY 2210.0073
GLU 2220.0058
ASP 2230.0033
GLN 2240.0047
THR 2250.0052
GLN 2260.0056
ASP 2270.0053
THR 2280.0046
GLU 2290.0047
LEU 2300.0043
VAL 2310.0034
GLU 2320.0041
THR 2330.0056
ARG 2340.0055
PRO 2350.0067
ALA 2360.0076
GLY 2370.0111
ASP 2380.0101
GLY 2390.0106
THR 2400.0075
PHE 2410.0059
GLN 2420.0051
LYS 2430.0043
TRP 2440.0036
ALA 2450.0031
ALA 2460.0029
VAL 2470.0032
VAL 2480.0053
VAL 2490.0062
PRO 2500.0086
SER 2510.0086
GLY 2520.0110
GLN 2530.0110
GLU 2540.0083
GLN 2550.0114
ARG 2560.0107
TYR 2570.0080
THR 2580.0080
CYS 2590.0063
HIS 2600.0070
VAL 2610.0078
GLN 2620.0077
HIS 2630.0079
GLU 2640.0082
GLY 2650.0089
LEU 2660.0110
PRO 2670.0123
LYS 2680.0118
PRO 2690.0104
LEU 2700.0103
THR 2710.0107
LEU 2720.0102
ARG 2730.0109
TRP 2740.0091
GLU 2750.0123
PRO 2760.0176
GLN 2780.0072
ARG 2790.0070
THR 2800.0062
PRO 2810.0062
LYS 2820.0073
ILE 2830.0048
GLN 2840.0056
VAL 2850.0064
TYR 2860.0081
SER 2870.0094
ARG 2880.0105
HIS 2890.0140
PRO 2900.0158
ALA 2910.0161
GLU 2920.0200
ASN 2930.0228
GLY 2940.0236
LYS 2950.0222
SER 2960.0186
ASN 2970.0151
PHE 2980.0107
LEU 2990.0088
ASN 3000.0075
CYS 3010.0060
TYR 3020.0063
VAL 3030.0072
SER 3040.0079
GLY 3050.0083
PHE 3060.0073
HIS 3070.0072
PRO 3080.0086
SER 3090.0080
ASP 3100.0070
ILE 3110.0063
GLU 3120.0061
VAL 3130.0072
ASP 3140.0069
LEU 3150.0070
LEU 3160.0099
LYS 3170.0123
ASN 3180.0167
GLY 3190.0157
GLU 3200.0140
ARG 3210.0106
ILE 3220.0080
GLU 3230.0068
LYS 3240.0060
VAL 3250.0060
GLU 3260.0077
HIS 3270.0088
SER 3280.0104
ASP 3290.0094
LEU 3300.0091
SER 3310.0087
PHE 3320.0088
SER 3330.0080
LYS 3340.0068
ASP 3350.0071
TRP 3360.0079
SER 3370.0088
PHE 3380.0083
TYR 3390.0081
LEU 3400.0075
LEU 3410.0075
TYR 3420.0070
TYR 3430.0069
THR 3440.0075
GLU 3450.0106
PHE 3460.0123
THR 3470.0160
PRO 3480.0179
THR 3490.0209
GLU 3500.0241
LYS 3510.0237
ASP 3520.0197
GLU 3530.0156
TYR 3540.0121
ALA 3550.0099
CYS 3560.0072
ARG 3570.0082
VAL 3580.0061
ASN 3590.0065
HIS 3600.0065
VAL 3610.0076
THR 3620.0066
LEU 3630.0075
SER 3640.0082
GLN 3650.0077
PRO 3660.0068
LYS 3670.0059
ILE 3680.0091
VAL 3690.0087
LYS 3700.0095
TRP 3710.0098
ASP 3720.0107
ARG 3730.0126
ASP 3740.0109
MET 3750.0071
SER 10.0065
GLN 20.0066
PHE 30.0067
ARG 40.0070
VAL 50.0070
SER 60.0084
PRO 70.0086
LEU 80.0073
ASP 90.0084
ARG 100.0083
THR 110.0077
TRP 120.0094
ASN 130.0104
LEU 140.0122
GLY 150.0143
GLU 160.0148
THR 170.0146
VAL 180.0120
GLU 190.0120
LEU 200.0098
LYS 210.0082
CYS 220.0075
GLN 230.0076
VAL 240.0070
LEU 250.0072
LEU 260.0049
SER 270.0054
ASN 280.0051
PRO 290.0052
THR 300.0054
SER 310.0065
GLY 320.0076
CYS 330.0075
SER 340.0075
TRP 350.0079
LEU 360.0058
PHE 370.0054
GLN 380.0042
PRO 390.0042
ARG 400.0033
GLY 410.0037
ALA 420.0030
ALA 430.0033
ALA 440.0029
SER 450.0029
PRO 460.0034
THR 470.0056
PHE 480.0073
LEU 490.0088
LEU 500.0103
TYR 510.0101
LEU 520.0106
SER 530.0100
GLN 540.0106
ASN 550.0118
LYS 560.0146
PRO 570.0133
LYS 580.0128
ALA 590.0125
ALA 600.0115
GLU 610.0143
GLY 620.0162
LEU 630.0156
ASP 640.0172
THR 650.0169
GLN 660.0193
ARG 670.0172
PHE 680.0152
SER 690.0155
GLY 700.0144
LYS 710.0128
ARG 720.0115
LEU 730.0125
GLY 740.0114
ASP 750.0094
THR 760.0105
PHE 770.0101
VAL 780.0113
LEU 790.0111
THR 800.0131
LEU 810.0145
SER 820.0163
ASP 830.0159
PHE 840.0131
ARG 850.0128
ARG 860.0117
GLU 870.0123
ASN 880.0108
GLU 890.0078
GLY 900.0054
TYR 910.0051
TYR 920.0061
PHE 930.0058
CYS 940.0064
SER 950.0058
ALA 960.0060
LEU 970.0063
SER 980.0066
ASN 990.0069
SER 1000.0067
ILE 1010.0073
MET 1020.0064
TYR 1030.0062
PHE 1040.0056
SER 1050.0064
HIS 1060.0061
PHE 1070.0053
VAL 1080.0062
PRO 1090.0055
VAL 1100.0066
PHE 1110.0068
LEU 1120.0080
PRO 1130.0079
ALA 1140.0079
SER 10.0110
GLN 20.0130
PHE 30.0143
ARG 40.0171
VAL 50.0156
SER 60.0198
PRO 70.0207
LEU 80.0203
ASP 90.0245
ARG 100.0223
THR 110.0197
TRP 120.0158
ASN 130.0145
LEU 140.0092
GLY 150.0081
GLU 160.0130
THR 170.0139
VAL 180.0129
GLU 190.0161
LEU 200.0150
LYS 210.0165
CYS 220.0154
GLN 230.0179
VAL 240.0164
LEU 250.0174
LEU 260.0145
SER 270.0170
ASN 280.0171
PRO 290.0155
THR 300.0160
SER 310.0127
GLY 320.0130
CYS 330.0108
SER 340.0091
TRP 350.0080
LEU 360.0052
PHE 370.0017
GLN 380.0018
PRO 390.0049
ARG 400.0079
GLY 410.0049
ALA 420.0045
ALA 430.0051
ALA 440.0042
SER 450.0040
PRO 460.0035
THR 470.0053
PHE 480.0072
LEU 490.0083
LEU 500.0105
TYR 510.0117
LEU 520.0129
SER 530.0128
GLN 540.0143
ASN 550.0151
LYS 560.0181
PRO 570.0152
LYS 580.0141
ALA 590.0128
ALA 600.0112
GLU 610.0134
GLY 620.0147
LEU 630.0126
ASP 640.0144
THR 650.0160
GLN 660.0175
ARG 670.0132
PHE 680.0124
SER 690.0158
GLY 700.0167
LYS 710.0182
ARG 720.0194
LEU 730.0218
GLY 740.0224
ASP 750.0191
THR 760.0186
PHE 770.0164
VAL 780.0163
LEU 790.0133
THR 800.0142
LEU 810.0111
SER 820.0117
ASP 830.0072
PHE 840.0049
ARG 850.0025
ARG 860.0091
GLU 870.0081
ASN 880.0021
GLU 890.0068
GLY 900.0059
TYR 910.0043
TYR 920.0045
PHE 930.0057
CYS 940.0081
SER 950.0084
ALA 960.0096
LEU 970.0100
SER 980.0106
ASN 990.0114
SER 1000.0106
ILE 1010.0101
MET 1020.0083
TYR 1030.0071
PHE 1040.0057
SER 1050.0072
HIS 1060.0084
PHE 1070.0073
VAL 1080.0100
PRO 1090.0106
VAL 1100.0101
PHE 1110.0126
LEU 1120.0164
PRO 1130.0238
ALA 1140.0278

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.