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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0829
MET 10.0013
SER 20.0008
THR 30.0010
ILE 40.0008
THR 50.0008
LYS 60.0008
ASP 70.0009
GLN 80.0008
ILE 90.0005
LEU 100.0005
GLU 110.0002
GLY 120.0007
VAL 130.0007
ALA 140.0003
ALA 150.0003
LEU 160.0002
SER 170.0014
VAL 180.0021
MET 190.0019
GLU 200.0006
ILE 210.0011
VAL 220.0014
GLU 230.0002
LEU 240.0014
ILE 250.0022
SER 260.0007
ALA 270.0021
MET 280.0028
GLU 290.0016
GLU 300.0011
LYS 310.0027
PHE 320.0024
GLY 330.0014
VAL 340.0034
SER 350.0042
ALA 360.0061
ALA 370.0063
ALA 380.0035
VAL 390.0026
ALA 400.0045
ALA 410.0040
GLY 420.0048
PRO 430.0050
ALA 440.0052
ALA 450.0041
ALA 460.0080
VAL 470.0068
GLU 480.0143
ALA 490.0167
ALA 500.0091
GLU 510.0070
GLU 520.0052
GLN 530.0054
THR 540.0048
GLU 550.0058
PHE 560.0049
ASP 570.0048
VAL 580.0035
VAL 590.0034
LEU 600.0025
ALA 610.0025
SER 620.0028
PHE 630.0028
GLY 640.0037
GLU 650.0051
ASN 660.0045
LYS 670.0039
VAL 680.0034
ALA 690.0029
VAL 700.0017
ILE 710.0019
LYS 720.0017
ALA 730.0024
VAL 740.0023
ARG 750.0025
GLY 760.0041
ALA 770.0052
THR 780.0057
GLY 790.0055
LEU 800.0052
GLY 810.0048
LEU 820.0041
LYS 830.0065
GLU 840.0064
ALA 850.0039
LYS 860.0048
ASP 870.0056
LEU 880.0044
VAL 890.0035
GLU 900.0047
SER 910.0036
ALA 920.0031
PRO 930.0036
ALA 940.0034
VAL 950.0037
LEU 960.0042
LYS 970.0055
GLU 980.0068
GLY 990.0074
VAL 1000.0063
ASN 1010.0061
LYS 1020.0044
ASP 1030.0051
GLU 1040.0056
ALA 1050.0040
GLU 1060.0036
THR 1070.0044
LEU 1080.0035
LYS 1090.0021
LYS 1100.0029
SER 1110.0031
LEU 1120.0014
GLU 1130.0021
GLU 1140.0034
ALA 1150.0024
GLY 1160.0028
ALA 1170.0018
SER 1180.0016
VAL 1190.0015
GLU 1200.0024
ILE 1210.0029
LYS 1220.0037
GLU 1230.0044
ALA 1240.0049
ALA 1250.0056
ALA 1260.0059
LYS 1270.0060
ALA 1280.0061
TYR 1290.0072
LYS 1300.0074
ILE 1310.0076
ILE 1320.0073
SER 1330.0061
LEU 1340.0055
LYS 1350.0045
TYR 1360.0015
THR 1370.0012
ARG 1380.0034
LYS 1390.0057
VAL 1400.0073
CYS 1410.0099
ILE 1420.0096
GLY 1430.0114
PRO 1440.0099
GLY 1450.0117
PRO 1460.0052
GLY 1470.0063
LYS 1480.0057
ALA 1490.0066
TYR 1500.0012
LYS 1510.0026
ILE 1520.0026
ILE 1530.0025
SER 1540.0030
LEU 1550.0035
LYS 1560.0029
TYR 1570.0017
THR 1580.0020
ARG 1590.0010
LYS 1600.0028
VAL 1610.0031
CYS 1620.0045
GLY 1630.0064
PRO 1640.0049
GLY 1650.0038
PRO 1660.0031
GLY 1670.0033
GLY 1680.0068
LYS 1690.0062
ALA 1700.0046
TYR 1710.0037
LYS 1720.0036
ILE 1730.0044
ILE 1740.0045
SER 1750.0061
LEU 1760.0056
LYS 1770.0048
TYR 1780.0039
THR 1790.0029
ARG 1800.0023
LYS 1810.0035
VAL 1820.0046
GLY 1830.0072
PRO 1840.0081
GLY 1850.0078
PRO 1860.0081
GLY 1870.0058
ILE 1880.0061
ILE 1890.0039
SER 1900.0039
LEU 1910.0020
LYS 1920.0012
TYR 1930.0010
THR 1940.0026
ARG 1950.0038
LYS 1960.0059
VAL 1970.0063
CYS 1980.0065
ILE 1990.0075
GLN 2000.0075
LEU 2010.0055
GLY 2020.0052
GLY 2030.0035
PRO 2040.0019
GLY 2050.0030
PRO 2060.0018
GLY 2070.0018
ASN 2080.0014
ILE 2090.0008
LYS 2100.0010
THR 2110.0012
ALA 2120.0013
PHE 2130.0015
HIS 2140.0014
CYS 2150.0012
TYR 2160.0025
ALA 2170.0026
ALA 2180.0023
TYR 2190.0027
MET 2200.0034
THR 2210.0030
SER 2220.0047
ILE 2230.0062
LYS 2240.0075
ALA 2250.0090
CYS 2260.0201
ASP 2270.0426
LEU 2280.0199
LYS 2290.0479
LYS 2300.0396
PRO 2310.0656
LEU 2320.0375
MET 2330.0178
GLU 2340.0338
SER 2350.0475
GLY 2360.0311
TRP 2370.0370
SER 2380.0441
ASP 2390.0506
THR 2400.0566
ALA 2410.0829
HIS 2420.0535
GLY 2430.0451
LYS 2440.0168
LYS 2450.0336
SER 2460.0454
LEU 2470.0307
PRO 2480.0123
SER 2490.0256
SER 2500.0272
SER 2510.0201
SER 2520.0245
TYR 2530.0312
SER 2540.0320
TYR 2550.0431
ARG 2560.0418
ARG 2570.0399
LYS 2580.0385
LEU 2590.0374
THR 2600.0355
ASN 2610.0363
PRO 2620.0343
ALA 2630.0362
ASN 2640.0353
LYS 2650.0380
GLU 2660.0414
GLU 2670.0343
SER 2680.0229
ILE 2690.0265
LYS 2700.0218
LYS 2710.0319
GLN 2720.0394
LYS 2730.0237
TYR 2740.0332
SER 2750.0240
TYR 2760.0244
PRO 2770.0366
TRP 2780.0419
GLN 2790.0470
THR 2800.0298
SER 2810.0367
LYS 2820.0242
CYS 2830.0286
PHE 2840.0384
ASP 2880.0021
TYR 2890.0015
GLN 2900.0022
TYR 2910.0044
CYS 2970.0388
ASN 2980.0319
PRO 2990.0110
GLY 3000.0042
LYS 3010.0133
LYS 3020.0142
ASN 3030.0114
THR 3040.0124
ILE 3050.0093
SER 3060.0084
GLY 3070.0046
TYR 3080.0080
LYS 3090.0090
ARG 3100.0044
MET 3110.0082
MET 3120.0134
ALA 3130.0154
THR 3140.0160
LYS 3150.0158
ASP 3160.0198
SER 3170.0172
PHE 3180.0122
GLN 3190.0103
SER 3200.0074
PHE 3210.0057
ASN 3220.0044
LEU 3230.0023
THR 3240.0015
GLU 3250.0017
PRO 3260.0018
HIS 3270.0056
ILE 3280.0075
THR 3290.0100
THR 3300.0123
ASN 3310.0108
LYS 3320.0077
LEU 3330.0054
GLU 3340.0032
TRP 3350.0008
ILE 3360.0033
ASP 3370.0051
PRO 3380.0057
ASP 3390.0062
GLY 3400.0061
ASN 3410.0061
THR 3420.0067
ARG 3430.0051
GLY 3440.0059
GLY 3450.0072
GLY 3460.0034
GLY 10.0026
SER 20.0025
HIS 30.0024
SER 40.0024
MET 50.0024
ARG 60.0022
TYR 70.0020
PHE 80.0020
PHE 90.0018
THR 100.0018
SER 110.0014
VAL 120.0012
SER 130.0005
ARG 140.0008
PRO 150.0014
GLY 160.0026
ARG 170.0026
GLY 180.0029
GLU 190.0024
PRO 200.0015
ARG 210.0024
PHE 220.0022
ILE 230.0026
ALA 240.0024
VAL 250.0028
GLY 260.0024
TYR 270.0024
VAL 280.0024
ASP 290.0025
ASP 300.0026
THR 310.0034
GLN 320.0032
PHE 330.0030
VAL 340.0031
ARG 350.0034
PHE 360.0038
ASP 370.0041
SER 380.0041
ASP 390.0049
ALA 400.0058
ALA 410.0075
SER 420.0072
GLN 430.0062
ARG 440.0056
MET 450.0045
GLU 460.0046
PRO 470.0044
ARG 480.0046
ALA 490.0046
PRO 500.0052
TRP 510.0043
ILE 520.0037
GLU 530.0048
GLN 540.0047
GLU 550.0039
GLY 560.0053
PRO 570.0062
GLU 580.0057
TYR 590.0043
TRP 600.0050
ASP 610.0059
GLY 620.0049
GLU 630.0040
THR 640.0049
ARG 650.0050
LYS 660.0037
VAL 670.0033
LYS 680.0039
ALA 690.0035
HIS 700.0022
SER 710.0024
GLN 720.0026
THR 730.0021
HIS 740.0011
ARG 750.0013
VAL 760.0021
ASP 770.0016
LEU 780.0011
GLY 790.0020
THR 800.0025
LEU 810.0021
ARG 820.0032
GLY 830.0042
TYR 840.0033
TYR 850.0039
ASN 860.0057
GLN 870.0052
SER 880.0057
GLU 890.0053
ALA 900.0049
GLY 910.0022
SER 920.0012
HIS 930.0011
THR 940.0009
VAL 950.0006
GLN 960.0014
ARG 970.0014
MET 980.0018
TYR 990.0018
GLY 1000.0021
CYS 1010.0025
ASP 1020.0025
VAL 1030.0027
GLY 1040.0028
SER 1050.0029
ASP 1060.0029
TRP 1070.0028
ARG 1080.0030
PHE 1090.0030
LEU 1100.0029
ARG 1110.0027
GLY 1120.0024
TYR 1130.0021
HIS 1140.0018
GLN 1150.0016
TYR 1160.0011
ALA 1170.0012
TYR 1180.0010
ASP 1190.0014
GLY 1200.0017
LYS 1210.0013
ASP 1220.0013
TYR 1230.0010
ILE 1240.0011
ALA 1250.0015
LEU 1260.0021
LYS 1270.0025
GLU 1280.0027
ASP 1290.0031
LEU 1300.0028
ARG 1310.0031
SER 1320.0027
TRP 1330.0021
THR 1340.0020
ALA 1350.0016
ALA 1360.0018
ASP 1370.0016
MET 1380.0013
ALA 1390.0011
ALA 1400.0007
GLN 1410.0011
THR 1420.0008
THR 1430.0011
LYS 1440.0016
HIS 1450.0018
LYS 1460.0020
TRP 1470.0022
GLU 1480.0028
ALA 1490.0032
ALA 1500.0034
HIS 1510.0036
VAL 1520.0029
ALA 1530.0028
GLU 1540.0035
GLN 1550.0033
LEU 1560.0028
ARG 1570.0029
ALA 1580.0029
TYR 1590.0027
LEU 1600.0025
GLU 1610.0026
GLY 1620.0026
THR 1630.0027
CYS 1640.0026
VAL 1650.0025
GLU 1660.0025
TRP 1670.0025
LEU 1680.0026
ARG 1690.0026
ARG 1700.0025
TYR 1710.0024
LEU 1720.0026
GLU 1730.0027
ASN 1740.0025
GLY 1750.0027
LYS 1760.0029
GLU 1770.0028
THR 1780.0024
LEU 1790.0023
GLN 1800.0026
ARG 1810.0011
THR 1820.0008
ASP 1830.0012
ALA 1840.0013
PRO 1850.0013
LYS 1860.0034
THR 1870.0035
HIS 1880.0039
MET 1890.0042
THR 1900.0044
HIS 1910.0060
HIS 1920.0064
ALA 1930.0078
VAL 1940.0078
SER 1950.0094
ASP 1960.0105
HIS 1970.0095
GLU 1980.0080
ALA 1990.0071
THR 2000.0057
LEU 2010.0049
ARG 2020.0039
CYS 2030.0034
TRP 2040.0027
ALA 2050.0023
LEU 2060.0023
SER 2070.0021
PHE 2080.0014
TYR 2090.0007
PRO 2100.0003
ALA 2110.0005
GLU 2120.0005
ILE 2130.0008
THR 2140.0013
LEU 2150.0018
THR 2160.0023
TRP 2170.0033
GLN 2180.0039
ARG 2190.0050
ASP 2200.0054
GLY 2210.0039
GLU 2220.0034
ASP 2230.0025
GLN 2240.0031
THR 2250.0026
GLN 2260.0025
ASP 2270.0029
THR 2280.0027
GLU 2290.0030
LEU 2300.0026
VAL 2310.0022
GLU 2320.0017
THR 2330.0008
ARG 2340.0009
PRO 2350.0015
ALA 2360.0025
GLY 2370.0038
ASP 2380.0042
GLY 2390.0030
THR 2400.0018
PHE 2410.0011
GLN 2420.0010
LYS 2430.0013
TRP 2440.0022
ALA 2450.0030
ALA 2460.0034
VAL 2470.0043
VAL 2480.0054
VAL 2490.0060
PRO 2500.0073
SER 2510.0087
GLY 2520.0092
GLN 2530.0084
GLU 2540.0074
GLN 2550.0079
ARG 2560.0068
TYR 2570.0057
THR 2580.0050
CYS 2590.0039
HIS 2600.0032
VAL 2610.0020
GLN 2620.0017
HIS 2630.0015
GLU 2640.0016
GLY 2650.0020
LEU 2660.0033
PRO 2670.0040
LYS 2680.0041
PRO 2690.0036
LEU 2700.0037
THR 2710.0048
LEU 2720.0051
ARG 2730.0062
TRP 2740.0064
GLU 2750.0077
PRO 2760.0087
GLN 2780.0023
ARG 2790.0024
THR 2800.0026
PRO 2810.0027
LYS 2820.0028
ILE 2830.0026
GLN 2840.0011
VAL 2850.0007
TYR 2860.0019
SER 2870.0033
ARG 2880.0047
HIS 2890.0064
PRO 2900.0074
ALA 2910.0075
GLU 2920.0097
ASN 2930.0095
GLY 2940.0107
LYS 2950.0109
SER 2960.0099
ASN 2970.0079
PHE 2980.0056
LEU 2990.0038
ASN 3000.0029
CYS 3010.0021
TYR 3020.0022
VAL 3030.0028
SER 3040.0026
GLY 3050.0025
PHE 3060.0026
HIS 3070.0026
PRO 3080.0030
SER 3090.0031
ASP 3100.0032
ILE 3110.0033
GLU 3120.0034
VAL 3130.0043
ASP 3140.0041
LEU 3150.0031
LEU 3160.0030
LYS 3170.0033
ASN 3180.0021
GLY 3190.0029
GLU 3200.0048
ARG 3210.0058
ILE 3220.0063
GLU 3230.0092
LYS 3240.0095
VAL 3250.0071
GLU 3260.0067
HIS 3270.0048
SER 3280.0035
ASP 3290.0030
LEU 3300.0027
SER 3310.0027
PHE 3320.0027
SER 3330.0021
LYS 3340.0017
ASP 3350.0019
TRP 3360.0021
SER 3370.0024
PHE 3380.0029
TYR 3390.0028
LEU 3400.0030
LEU 3410.0031
TYR 3420.0035
TYR 3430.0047
THR 3440.0062
GLU 3450.0074
PHE 3460.0070
THR 3470.0078
PRO 3480.0065
THR 3490.0073
GLU 3500.0072
LYS 3510.0055
ASP 3520.0041
GLU 3530.0021
TYR 3540.0018
ALA 3550.0008
CYS 3560.0017
ARG 3570.0032
VAL 3580.0031
ASN 3590.0030
HIS 3600.0031
VAL 3610.0031
THR 3620.0032
LEU 3630.0029
SER 3640.0027
GLN 3650.0024
PRO 3660.0025
LYS 3670.0028
ILE 3680.0032
VAL 3690.0021
LYS 3700.0013
TRP 3710.0016
ASP 3720.0033
ARG 3730.0037
ASP 3740.0052
MET 3750.0046
SER 10.0016
GLN 20.0015
PHE 30.0014
ARG 40.0014
VAL 50.0014
SER 60.0011
PRO 70.0011
LEU 80.0012
ASP 90.0014
ARG 100.0012
THR 110.0014
TRP 120.0012
ASN 130.0017
LEU 140.0026
GLY 150.0028
GLU 160.0017
THR 170.0017
VAL 180.0013
GLU 190.0012
LEU 200.0010
LYS 210.0014
CYS 220.0015
GLN 230.0015
VAL 240.0015
LEU 250.0015
LEU 260.0019
SER 270.0017
ASN 280.0018
PRO 290.0018
THR 300.0019
SER 310.0017
GLY 320.0016
CYS 330.0015
SER 340.0014
TRP 350.0013
LEU 360.0005
PHE 370.0007
GLN 380.0011
PRO 390.0017
ARG 400.0022
GLY 410.0034
ALA 420.0020
ALA 430.0011
ALA 440.0017
SER 450.0011
PRO 460.0005
THR 470.0004
PHE 480.0007
LEU 490.0010
LEU 500.0014
TYR 510.0017
LEU 520.0017
SER 530.0016
GLN 540.0017
ASN 550.0017
LYS 560.0021
PRO 570.0019
LYS 580.0018
ALA 590.0018
ALA 600.0017
GLU 610.0019
GLY 620.0025
LEU 630.0024
ASP 640.0029
THR 650.0025
GLN 660.0031
ARG 670.0027
PHE 680.0022
SER 690.0021
GLY 700.0018
LYS 710.0019
ARG 720.0018
LEU 730.0018
GLY 740.0018
ASP 750.0017
THR 760.0017
PHE 770.0016
VAL 780.0015
LEU 790.0015
THR 800.0015
LEU 810.0019
SER 820.0023
ASP 830.0025
PHE 840.0021
ARG 850.0028
ARG 860.0032
GLU 870.0034
ASN 880.0023
GLU 890.0025
GLY 900.0026
TYR 910.0015
TYR 920.0011
PHE 930.0011
CYS 940.0012
SER 950.0013
ALA 960.0019
LEU 970.0021
SER 980.0023
ASN 990.0025
SER 1000.0024
ILE 1010.0020
MET 1020.0017
TYR 1030.0018
PHE 1040.0016
SER 1050.0017
HIS 1060.0013
PHE 1070.0013
VAL 1080.0013
PRO 1090.0015
VAL 1100.0015
PHE 1110.0022
LEU 1120.0023
PRO 1130.0024
ALA 1140.0035
SER 10.0008
GLN 20.0006
PHE 30.0008
ARG 40.0016
VAL 50.0021
SER 60.0037
PRO 70.0048
LEU 80.0047
ASP 90.0063
ARG 100.0068
THR 110.0070
TRP 120.0071
ASN 130.0079
LEU 140.0077
GLY 150.0076
GLU 160.0074
THR 170.0065
VAL 180.0053
GLU 190.0047
LEU 200.0035
LYS 210.0028
CYS 220.0019
GLN 230.0019
VAL 240.0015
LEU 250.0013
LEU 260.0016
SER 270.0019
ASN 280.0021
PRO 290.0019
THR 300.0021
SER 310.0023
GLY 320.0020
CYS 330.0013
SER 340.0010
TRP 350.0005
LEU 360.0005
PHE 370.0006
GLN 380.0015
PRO 390.0022
ARG 400.0033
GLY 410.0020
ALA 420.0023
ALA 430.0022
ALA 440.0017
SER 450.0014
PRO 460.0012
THR 470.0012
PHE 480.0012
LEU 490.0011
LEU 500.0014
TYR 510.0020
LEU 520.0021
SER 530.0019
GLN 540.0021
ASN 550.0022
LYS 560.0024
PRO 570.0022
LYS 580.0023
ALA 590.0022
ALA 600.0022
GLU 610.0020
GLY 620.0014
LEU 630.0015
ASP 640.0026
THR 650.0031
GLN 660.0045
ARG 670.0042
PHE 680.0031
SER 690.0031
GLY 700.0026
LYS 710.0025
ARG 720.0026
LEU 730.0034
GLY 740.0034
ASP 750.0023
THR 760.0022
PHE 770.0022
VAL 780.0028
LEU 790.0026
THR 800.0036
LEU 810.0046
SER 820.0056
ASP 830.0060
PHE 840.0056
ARG 850.0055
ARG 860.0059
GLU 870.0045
ASN 880.0037
GLU 890.0042
GLY 900.0033
TYR 910.0022
TYR 920.0015
PHE 930.0009
CYS 940.0005
SER 950.0008
ALA 960.0013
LEU 970.0015
SER 980.0018
ASN 990.0021
SER 1000.0020
ILE 1010.0017
MET 1020.0013
TYR 1030.0008
PHE 1040.0004
SER 1050.0003
HIS 1060.0015
PHE 1070.0021
VAL 1080.0027
PRO 1090.0037
VAL 1100.0040
PHE 1110.0056
LEU 1120.0072
PRO 1130.0086
ALA 1140.0093

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.