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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0575
MET 10.0031
SER 20.0021
THR 30.0019
ILE 40.0018
THR 50.0017
LYS 60.0019
ASP 70.0020
GLN 80.0018
ILE 90.0012
LEU 100.0011
GLU 110.0003
GLY 120.0011
VAL 130.0012
ALA 140.0007
ALA 150.0001
LEU 160.0006
SER 170.0035
VAL 180.0052
MET 190.0046
GLU 200.0016
ILE 210.0025
VAL 220.0035
GLU 230.0010
LEU 240.0030
ILE 250.0047
SER 260.0016
ALA 270.0049
MET 280.0059
GLU 290.0029
GLU 300.0031
LYS 310.0064
PHE 320.0040
GLY 330.0031
VAL 340.0073
SER 350.0096
ALA 360.0138
ALA 370.0141
ALA 380.0079
VAL 390.0047
ALA 400.0073
ALA 410.0092
GLY 420.0105
PRO 430.0095
ALA 440.0093
ALA 450.0078
ALA 460.0142
VAL 470.0146
GLU 480.0180
ALA 490.0203
ALA 500.0076
GLU 510.0132
GLU 520.0082
GLN 530.0106
THR 540.0116
GLU 550.0136
PHE 560.0126
ASP 570.0123
VAL 580.0100
VAL 590.0091
LEU 600.0071
ALA 610.0070
SER 620.0054
PHE 630.0043
GLY 640.0038
GLU 650.0056
ASN 660.0052
LYS 670.0049
VAL 680.0046
ALA 690.0040
VAL 700.0032
ILE 710.0038
LYS 720.0042
ALA 730.0066
VAL 740.0072
ARG 750.0067
GLY 760.0098
ALA 770.0127
THR 780.0133
GLY 790.0119
LEU 800.0108
GLY 810.0093
LEU 820.0075
LYS 830.0122
GLU 840.0127
ALA 850.0081
LYS 860.0085
ASP 870.0106
LEU 880.0092
VAL 890.0068
GLU 900.0087
SER 910.0070
ALA 920.0064
PRO 930.0080
ALA 940.0079
VAL 950.0092
LEU 960.0112
LYS 970.0138
GLU 980.0160
GLY 990.0173
VAL 1000.0154
ASN 1010.0152
LYS 1020.0123
ASP 1030.0130
GLU 1040.0138
ALA 1050.0115
GLU 1060.0105
THR 1070.0113
LEU 1080.0103
LYS 1090.0080
LYS 1100.0076
SER 1110.0080
LEU 1120.0059
GLU 1130.0049
GLU 1140.0058
ALA 1150.0040
GLY 1160.0029
ALA 1170.0034
SER 1180.0046
VAL 1190.0067
GLU 1200.0088
ILE 1210.0088
LYS 1220.0095
GLU 1230.0102
ALA 1240.0116
ALA 1250.0128
ALA 1260.0163
LYS 1270.0176
ALA 1280.0184
TYR 1290.0221
LYS 1300.0233
ILE 1310.0234
ILE 1320.0228
SER 1330.0193
LEU 1340.0173
LYS 1350.0151
TYR 1360.0060
THR 1370.0031
ARG 1380.0061
LYS 1390.0103
VAL 1400.0139
CYS 1410.0213
ILE 1420.0205
GLY 1430.0239
PRO 1440.0224
GLY 1450.0269
PRO 1460.0055
GLY 1470.0156
LYS 1480.0228
ALA 1490.0239
TYR 1500.0122
LYS 1510.0082
ILE 1520.0035
ILE 1530.0034
SER 1540.0060
LEU 1550.0104
LYS 1560.0108
TYR 1570.0073
THR 1580.0090
ARG 1590.0055
LYS 1600.0103
VAL 1610.0076
CYS 1620.0147
GLY 1630.0197
PRO 1640.0155
GLY 1650.0152
PRO 1660.0151
GLY 1670.0077
GLY 1680.0195
LYS 1690.0155
ALA 1700.0106
TYR 1710.0126
LYS 1720.0123
ILE 1730.0170
ILE 1740.0173
SER 1750.0230
LEU 1760.0194
LYS 1770.0151
TYR 1780.0098
THR 1790.0050
ARG 1800.0013
LYS 1810.0112
VAL 1820.0182
GLY 1830.0245
PRO 1840.0261
GLY 1850.0198
PRO 1860.0146
GLY 1870.0101
ILE 1880.0117
ILE 1890.0081
SER 1900.0090
LEU 1910.0057
LYS 1920.0060
TYR 1930.0044
THR 1940.0088
ARG 1950.0107
LYS 1960.0171
VAL 1970.0184
CYS 1980.0194
ILE 1990.0229
GLN 2000.0234
LEU 2010.0176
GLY 2020.0168
GLY 2030.0122
PRO 2040.0078
GLY 2050.0106
PRO 2060.0073
GLY 2070.0074
ASN 2080.0066
ILE 2090.0051
LYS 2100.0054
THR 2110.0035
ALA 2120.0042
PHE 2130.0047
HIS 2140.0038
CYS 2150.0032
TYR 2160.0042
ALA 2170.0044
ALA 2180.0032
TYR 2190.0031
MET 2200.0043
THR 2210.0028
SER 2220.0040
ILE 2230.0046
LYS 2240.0054
ALA 2250.0059
CYS 2260.0131
ASP 2270.0106
LEU 2280.0088
LYS 2290.0169
LYS 2300.0172
PRO 2310.0119
LEU 2320.0136
MET 2330.0028
GLU 2340.0060
SER 2350.0065
GLY 2360.0096
TRP 2370.0132
SER 2380.0186
ASP 2390.0248
THR 2400.0310
ALA 2410.0575
HIS 2420.0351
GLY 2430.0303
LYS 2440.0121
LYS 2450.0201
SER 2460.0220
LEU 2470.0160
PRO 2480.0066
SER 2490.0103
SER 2500.0112
SER 2510.0108
SER 2520.0102
TYR 2530.0121
SER 2540.0098
TYR 2550.0138
ARG 2560.0147
ARG 2570.0143
LYS 2580.0134
LEU 2590.0137
THR 2600.0127
ASN 2610.0150
PRO 2620.0160
ALA 2630.0166
ASN 2640.0151
LYS 2650.0146
GLU 2660.0151
GLU 2670.0129
SER 2680.0095
ILE 2690.0103
LYS 2700.0090
LYS 2710.0086
GLN 2720.0100
LYS 2730.0062
TYR 2740.0097
SER 2750.0084
TYR 2760.0071
PRO 2770.0122
TRP 2780.0153
GLN 2790.0160
THR 2800.0098
SER 2810.0123
LYS 2820.0076
CYS 2830.0096
PHE 2840.0137
ASP 2880.0043
TYR 2890.0026
GLN 2900.0020
TYR 2910.0057
CYS 2970.0253
ASN 2980.0300
PRO 2990.0204
GLY 3000.0159
LYS 3010.0133
LYS 3020.0104
ASN 3030.0032
THR 3040.0090
ILE 3050.0063
SER 3060.0114
GLY 3070.0159
TYR 3080.0176
LYS 3090.0109
ARG 3100.0039
MET 3110.0091
MET 3120.0082
ALA 3130.0073
THR 3140.0095
LYS 3150.0071
ASP 3160.0136
SER 3170.0177
PHE 3180.0137
GLN 3190.0140
SER 3200.0088
PHE 3210.0080
ASN 3220.0075
LEU 3230.0050
THR 3240.0086
GLU 3250.0100
PRO 3260.0071
HIS 3270.0124
ILE 3280.0130
THR 3290.0168
THR 3300.0192
ASN 3310.0170
LYS 3320.0140
LEU 3330.0094
GLU 3340.0085
TRP 3350.0068
ILE 3360.0099
ASP 3370.0087
PRO 3380.0139
ASP 3390.0149
GLY 3400.0117
ASN 3410.0112
THR 3420.0056
ARG 3430.0107
GLY 3440.0101
GLY 3450.0140
GLY 3460.0078
GLY 10.0095
SER 20.0098
HIS 30.0088
SER 40.0086
MET 50.0078
ARG 60.0071
TYR 70.0061
PHE 80.0056
PHE 90.0047
THR 100.0044
SER 110.0042
VAL 120.0040
SER 130.0059
ARG 140.0064
PRO 150.0091
GLY 160.0117
ARG 170.0104
GLY 180.0108
GLU 190.0096
PRO 200.0067
ARG 210.0058
PHE 220.0057
ILE 230.0057
ALA 240.0058
VAL 250.0066
GLY 260.0056
TYR 270.0059
VAL 280.0061
ASP 290.0063
ASP 300.0061
THR 310.0077
GLN 320.0073
PHE 330.0076
VAL 340.0077
ARG 350.0081
PHE 360.0092
ASP 370.0090
SER 380.0098
ASP 390.0104
ALA 400.0126
ALA 410.0168
SER 420.0169
GLN 430.0152
ARG 440.0143
MET 450.0119
GLU 460.0116
PRO 470.0113
ARG 480.0110
ALA 490.0117
PRO 500.0139
TRP 510.0128
ILE 520.0111
GLU 530.0135
GLN 540.0144
GLU 550.0124
GLY 560.0156
PRO 570.0168
GLU 580.0153
TYR 590.0126
TRP 600.0137
ASP 610.0157
GLY 620.0136
GLU 630.0117
THR 640.0132
ARG 650.0136
LYS 660.0112
VAL 670.0100
LYS 680.0114
ALA 690.0109
HIS 700.0082
SER 710.0082
GLN 720.0096
THR 730.0085
HIS 740.0062
ARG 750.0073
VAL 760.0087
ASP 770.0072
LEU 780.0063
GLY 790.0086
THR 800.0093
LEU 810.0075
ARG 820.0108
GLY 830.0137
TYR 840.0116
TYR 850.0136
ASN 860.0177
GLN 870.0157
SER 880.0168
GLU 890.0152
ALA 900.0139
GLY 910.0092
SER 920.0064
HIS 930.0058
THR 940.0041
VAL 950.0034
GLN 960.0045
ARG 970.0046
MET 980.0058
TYR 990.0062
GLY 1000.0076
CYS 1010.0098
ASP 1020.0108
VAL 1030.0118
GLY 1040.0129
SER 1050.0132
ASP 1060.0140
TRP 1070.0124
ARG 1080.0135
PHE 1090.0131
LEU 1100.0134
ARG 1110.0114
GLY 1120.0095
TYR 1130.0082
HIS 1140.0065
GLN 1150.0064
TYR 1160.0045
ALA 1170.0052
TYR 1180.0053
ASP 1190.0064
GLY 1200.0072
LYS 1210.0075
ASP 1220.0071
TYR 1230.0058
ILE 1240.0053
ALA 1250.0060
LEU 1260.0082
LYS 1270.0102
GLU 1280.0117
ASP 1290.0121
LEU 1300.0102
ARG 1310.0103
SER 1320.0089
TRP 1330.0075
THR 1340.0086
ALA 1350.0075
ALA 1360.0085
ASP 1370.0080
MET 1380.0073
ALA 1390.0062
ALA 1400.0052
GLN 1410.0056
THR 1420.0037
THR 1430.0020
LYS 1440.0036
HIS 1450.0022
LYS 1460.0010
TRP 1470.0031
GLU 1480.0052
ALA 1490.0049
ALA 1500.0058
HIS 1510.0077
VAL 1520.0060
ALA 1530.0078
GLU 1540.0099
GLN 1550.0089
LEU 1560.0081
ARG 1570.0102
ALA 1580.0107
TYR 1590.0092
LEU 1600.0098
GLU 1610.0114
GLY 1620.0112
THR 1630.0100
CYS 1640.0095
VAL 1650.0107
GLU 1660.0101
TRP 1670.0093
LEU 1680.0094
ARG 1690.0102
ARG 1700.0098
TYR 1710.0080
LEU 1720.0083
GLU 1730.0090
ASN 1740.0083
GLY 1750.0078
LYS 1760.0067
GLU 1770.0060
THR 1780.0049
LEU 1790.0053
GLN 1800.0062
ARG 1810.0045
THR 1820.0045
ASP 1830.0048
ALA 1840.0052
PRO 1850.0047
LYS 1860.0087
THR 1870.0084
HIS 1880.0084
MET 1890.0088
THR 1900.0091
HIS 1910.0139
HIS 1920.0154
ALA 1930.0203
VAL 1940.0207
SER 1950.0262
ASP 1960.0305
HIS 1970.0278
GLU 1980.0222
ALA 1990.0189
THR 2000.0139
LEU 2010.0111
ARG 2020.0083
CYS 2030.0073
TRP 2040.0059
ALA 2050.0065
LEU 2060.0075
SER 2070.0069
PHE 2080.0058
TYR 2090.0044
PRO 2100.0035
ALA 2110.0047
GLU 2120.0046
ILE 2130.0040
THR 2140.0036
LEU 2150.0035
THR 2160.0056
TRP 2170.0080
GLN 2180.0109
ARG 2190.0139
ASP 2200.0167
GLY 2210.0138
GLU 2220.0110
ASP 2230.0073
GLN 2240.0069
THR 2250.0038
GLN 2260.0043
ASP 2270.0061
THR 2280.0051
GLU 2290.0055
LEU 2300.0042
VAL 2310.0047
GLU 2320.0041
THR 2330.0035
ARG 2340.0040
PRO 2350.0056
ALA 2360.0082
GLY 2370.0105
ASP 2380.0114
GLY 2390.0072
THR 2400.0059
PHE 2410.0052
GLN 2420.0042
LYS 2430.0038
TRP 2440.0047
ALA 2450.0059
ALA 2460.0071
VAL 2470.0101
VAL 2480.0138
VAL 2490.0164
PRO 2500.0207
SER 2510.0239
GLY 2520.0255
GLN 2530.0232
GLU 2540.0203
GLN 2550.0220
ARG 2560.0188
TYR 2570.0152
THR 2580.0135
CYS 2590.0102
HIS 2600.0099
VAL 2610.0050
GLN 2620.0059
HIS 2630.0061
GLU 2640.0074
GLY 2650.0072
LEU 2660.0110
PRO 2670.0137
LYS 2680.0136
PRO 2690.0119
LEU 2700.0106
THR 2710.0146
LEU 2720.0141
ARG 2730.0167
TRP 2740.0165
GLU 2750.0205
PRO 2760.0239
GLN 2780.0058
ARG 2790.0057
THR 2800.0058
PRO 2810.0058
LYS 2820.0055
ILE 2830.0051
GLN 2840.0038
VAL 2850.0051
TYR 2860.0081
SER 2870.0112
ARG 2880.0142
HIS 2890.0189
PRO 2900.0218
ALA 2910.0226
GLU 2920.0284
ASN 2930.0293
GLY 2940.0317
LYS 2950.0313
SER 2960.0282
ASN 2970.0230
PHE 2980.0167
LEU 2990.0123
ASN 3000.0091
CYS 3010.0057
TYR 3020.0054
VAL 3030.0062
SER 3040.0059
GLY 3050.0058
PHE 3060.0063
HIS 3070.0066
PRO 3080.0073
SER 3090.0074
ASP 3100.0075
ILE 3110.0075
GLU 3120.0076
VAL 3130.0087
ASP 3140.0083
LEU 3150.0081
LEU 3160.0080
LYS 3170.0111
ASN 3180.0098
GLY 3190.0055
GLU 3200.0095
ARG 3210.0122
ILE 3220.0156
GLU 3230.0219
LYS 3240.0235
VAL 3250.0176
GLU 3260.0169
HIS 3270.0119
SER 3280.0073
ASP 3290.0061
LEU 3300.0057
SER 3310.0064
PHE 3320.0069
SER 3330.0065
LYS 3340.0061
ASP 3350.0061
TRP 3360.0065
SER 3370.0068
PHE 3380.0071
TYR 3390.0070
LEU 3400.0076
LEU 3410.0080
TYR 3420.0088
TYR 3430.0131
THR 3440.0168
GLU 3450.0206
PHE 3460.0205
THR 3470.0235
PRO 3480.0212
THR 3490.0252
GLU 3500.0264
LYS 3510.0237
ASP 3520.0183
GLU 3530.0126
TYR 3540.0100
ALA 3550.0062
CYS 3560.0041
ARG 3570.0053
VAL 3580.0054
ASN 3590.0065
HIS 3600.0071
VAL 3610.0083
THR 3620.0077
LEU 3630.0081
SER 3640.0086
GLN 3650.0076
PRO 3660.0065
LYS 3670.0062
ILE 3680.0059
VAL 3690.0059
LYS 3700.0072
TRP 3710.0089
ASP 3720.0124
ARG 3730.0114
ASP 3740.0149
MET 3750.0127
SER 10.0043
GLN 20.0037
PHE 30.0035
ARG 40.0040
VAL 50.0036
SER 60.0037
PRO 70.0036
LEU 80.0031
ASP 90.0029
ARG 100.0034
THR 110.0036
TRP 120.0053
ASN 130.0067
LEU 140.0083
GLY 150.0095
GLU 160.0073
THR 170.0066
VAL 180.0055
GLU 190.0049
LEU 200.0038
LYS 210.0044
CYS 220.0041
GLN 230.0038
VAL 240.0033
LEU 250.0033
LEU 260.0032
SER 270.0031
ASN 280.0021
PRO 290.0015
THR 300.0019
SER 310.0010
GLY 320.0013
CYS 330.0018
SER 340.0021
TRP 350.0026
LEU 360.0016
PHE 370.0014
GLN 380.0013
PRO 390.0014
ARG 400.0015
GLY 410.0036
ALA 420.0038
ALA 430.0037
ALA 440.0035
SER 450.0033
PRO 460.0015
THR 470.0015
PHE 480.0017
LEU 490.0018
LEU 500.0022
TYR 510.0021
LEU 520.0019
SER 530.0013
GLN 540.0012
ASN 550.0007
LYS 560.0015
PRO 570.0019
LYS 580.0020
ALA 590.0026
ALA 600.0029
GLU 610.0041
GLY 620.0050
LEU 630.0051
ASP 640.0059
THR 650.0052
GLN 660.0067
ARG 670.0067
PHE 680.0056
SER 690.0049
GLY 700.0042
LYS 710.0036
ARG 720.0034
LEU 730.0039
GLY 740.0035
ASP 750.0035
THR 760.0038
PHE 770.0036
VAL 780.0041
LEU 790.0042
THR 800.0045
LEU 810.0063
SER 820.0076
ASP 830.0083
PHE 840.0071
ARG 850.0076
ARG 860.0075
GLU 870.0076
ASN 880.0058
GLU 890.0045
GLY 900.0030
TYR 910.0019
TYR 920.0019
PHE 930.0017
CYS 940.0019
SER 950.0019
ALA 960.0016
LEU 970.0024
SER 980.0033
ASN 990.0044
SER 1000.0045
ILE 1010.0037
MET 1020.0028
TYR 1030.0024
PHE 1040.0021
SER 1050.0022
HIS 1060.0020
PHE 1070.0022
VAL 1080.0025
PRO 1090.0028
VAL 1100.0030
PHE 1110.0035
LEU 1120.0044
PRO 1130.0030
ALA 1140.0025
SER 10.0033
GLN 20.0035
PHE 30.0046
ARG 40.0061
VAL 50.0066
SER 60.0098
PRO 70.0117
LEU 80.0112
ASP 90.0141
ARG 100.0152
THR 110.0158
TRP 120.0161
ASN 130.0179
LEU 140.0176
GLY 150.0170
GLU 160.0164
THR 170.0143
VAL 180.0122
GLU 190.0111
LEU 200.0089
LYS 210.0076
CYS 220.0062
GLN 230.0063
VAL 240.0050
LEU 250.0050
LEU 260.0041
SER 270.0050
ASN 280.0049
PRO 290.0042
THR 300.0042
SER 310.0040
GLY 320.0039
CYS 330.0030
SER 340.0022
TRP 350.0023
LEU 360.0024
PHE 370.0032
GLN 380.0041
PRO 390.0057
ARG 400.0073
GLY 410.0025
ALA 420.0027
ALA 430.0023
ALA 440.0013
SER 450.0010
PRO 460.0014
THR 470.0018
PHE 480.0023
LEU 490.0026
LEU 500.0032
TYR 510.0039
LEU 520.0047
SER 530.0053
GLN 540.0068
ASN 550.0072
LYS 560.0067
PRO 570.0055
LYS 580.0053
ALA 590.0048
ALA 600.0043
GLU 610.0041
GLY 620.0038
LEU 630.0039
ASP 640.0056
THR 650.0055
GLN 660.0086
ARG 670.0090
PHE 680.0071
SER 690.0069
GLY 700.0062
LYS 710.0057
ARG 720.0061
LEU 730.0080
GLY 740.0081
ASP 750.0063
THR 760.0065
PHE 770.0059
VAL 780.0071
LEU 790.0068
THR 800.0084
LEU 810.0106
SER 820.0123
ASP 830.0135
PHE 840.0132
ARG 850.0135
ARG 860.0149
GLU 870.0124
ASN 880.0099
GLU 890.0107
GLY 900.0083
TYR 910.0059
TYR 920.0049
PHE 930.0037
CYS 940.0030
SER 950.0023
ALA 960.0024
LEU 970.0022
SER 980.0022
ASN 990.0023
SER 1000.0022
ILE 1010.0024
MET 1020.0019
TYR 1030.0018
PHE 1040.0021
SER 1050.0028
HIS 1060.0040
PHE 1070.0054
VAL 1080.0070
PRO 1090.0088
VAL 1100.0099
PHE 1110.0129
LEU 1120.0164
PRO 1130.0192
ALA 1140.0206

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.